BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0230.6
(1145 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA40555.1| TNP2 [Antirrhinum majus] 790 0.0
pir||S23818 hypothetical protein Tnp2 - garden snapdragon transp... 790 0.0
gb|AAP53328.1| putative TNP2-like transposon protein [Oryza sati... 751 0.0
gb|AAD55677.1| putative transposase protein [Zea mays] 717 0.0
gb|AAP52603.1| putative transposon protein [Oryza sativa (japoni... 659 0.0
ref|XP_474883.1| OSJNBa0021F22.10 [Oryza sativa (japonica cultiv... 638 0.0
gb|AAX95206.1| transposon protein, putative, CACTA, En/Spm sub-c... 638 0.0
ref|NP_915890.1| putative retrotransposable elements TNP2 [Oryza... 637 0.0
ref|XP_471076.1| OSJNBb0089K24.2 [Oryza sativa (japonica cultiva... 637 0.0
ref|NP_908869.1| B1151H08.16 [Oryza sativa (japonica cultivar-gr... 636 e-180
emb|CAE03273.1| OSJNBa0011J08.28 [Oryza sativa (japonica cultiva... 634 e-180
gb|AAT77012.1| putative Transposase family tnp2 protein [Oryza s... 634 e-180
gb|AAV32149.1| putative polyprotein [Oryza sativa (japonica cult... 632 e-179
gb|AAX95188.1| transposon protein, putative, CACTA, En/Spm sub-c... 619 e-175
gb|AAX96657.1| transposon protein, putative, CACTA, En/Spm sub-c... 619 e-175
gb|AAX96162.1| transposon protein, putative, CACTA, En/Spm sub-c... 618 e-175
gb|AAT85098.1| putative polyprotein [Oryza sativa (japonica cult... 610 e-173
ref|NP_918326.1| putative TNP2 [Oryza sativa (japonica cultivar-... 605 e-171
gb|AAX96209.1| transposon protein, putative, CACTA, En/Spm sub-c... 601 e-170
gb|AAP53710.1| putative TNP-like transposable element [Oryza sat... 601 e-170
>emb|CAA40555.1| TNP2 [Antirrhinum majus]
Length = 752
Score = 790 bits (2041), Expect = 0.0
Identities = 402/772 (52%), Positives = 520/772 (67%), Gaps = 43/772 (5%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQNSQVSEKIWCPCTTCANCKSLSRTSVYEHLTNP 64
+ W+ SR +EEY G+++FL+FAF N ++ KI CPC C N + R + EHL
Sbjct: 8 KSWMHK-SRLTEEYENGLDQFLDFAFDNVCLNGKIICPCKQCKNALWMDRETAKEHLIID 66
Query: 65 RRGFLRGYKQWIFHGEKPVASSSTIEEPEHTEMEHDMDGLIHDVLASHTAEDPLFDDGER 124
GF++GY W+ HGE S + I+ E DM L+HD +D + + E
Sbjct: 67 --GFIKGYTHWVIHGEGSSNSQNNIQNERLNTFE-DMHNLVHDAFG--VEDDNINSEEEP 121
Query: 125 NPQVEEN--ANKFYRLVKDNEQILYPNCKKYSKLSFMVHLYHLKCLHGWSDKSFSMLLDL 182
N + E N A FY+L+ D +Q LYP CK +S+L F+V L+HLKCL WS+K+F+MLL+L
Sbjct: 122 NEEEEPNEEAKTFYKLLDDAQQELYPGCKDFSRLRFIVRLFHLKCLGKWSNKTFTMLLEL 181
Query: 183 LRDAFPEG-NVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTNDEVCPKCGASR 241
L++AFPE N LPKS+YE +K+I LGL KI ACPNDC+LY ++ ND+ C C SR
Sbjct: 182 LKEAFPEQTNSLPKSYYEVQKIIGALGLTCVKIDACPNDCMLYRKEHANDDACHVCNTSR 241
Query: 242 WKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRLFMSSKIAEAM 301
+ ++ SE+ ++ + +PAK+LR+FPLKPRLQRLF SSK A M
Sbjct: 242 Y------IEGENNSVSEEASSSKCKR------VPAKVLRYFPLKPRLQRLFTSSKTASFM 289
Query: 302 RWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNPFKTMSITHST 361
RWH++ R DG LRHP+DS W FD ++ FA DP N+RLGLA+DGFNPF+TMS+ HST
Sbjct: 290 RWHKEERTKDGQLRHPSDSPLWHAFDHQHPDFAEDPRNIRLGLAADGFNPFRTMSVAHST 349
Query: 362 *PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQELWENGLETFD 421
PVIL +N+PPWMCMK+ FF L+LLIPGP PGNNID Y+QPL++ELQELW G+ T+D
Sbjct: 350 WPVILTPYNIPPWMCMKEPFFFLTLLIPGPSPPGNNIDVYMQPLIEELQELW-GGVNTYD 408
Query: 422 AYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLRNGRKFCYMSH 481
A KE+F + AAL+WTIND+PAYANLSGWSTKG+ ACP C +T S++L+ K+CYM H
Sbjct: 409 ASAKENFNVRAALLWTINDYPAYANLSGWSTKGELACPSCHKDTCSKYLQKSHKYCYMGH 468
Query: 482 RRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGTAQLRQLDEIEDECLGDQAQ-------- 533
RR+L H +R + K FDG +E+R PI L G D + +E G +
Sbjct: 469 RRFLNRYHPYRKDTKSFDGNEEYRRAPIALTG-------DMVSEEITGFNIKFGKKVDDN 521
Query: 534 -----RWKKKSILFSLPYWKYNELRHNLDVMHIEKNVCDNIIGTLLNQEGKSKDNYKARA 588
WKK+SI F LPYWK + LRHN DVMHIEKNVC++IIGTLLN EG++KD+ +R
Sbjct: 522 PTLPLNWKKRSIFFDLPYWKDSLLRHNFDVMHIEKNVCESIIGTLLNLEGRTKDHENSRL 581
Query: 589 DLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKDDFLSVLKNVKAPDECSSNISRCV 648
DL DMGIRS LHP S + LP ACY M+ KEK+ +LK VK PD +SNISR V
Sbjct: 582 DLKDMGIRSELHP-ISLESGKHYLPAACYSMSKKEKEIVFEILKTVKVPDGYASNISRRV 640
Query: 649 QVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTSVLIDLCNFFKQICSKVLNVKFIE 708
Q++ KI GLKS+D H+LMQ+LLPIALR LP V + LI LC FF+++CSKVLN + +
Sbjct: 641 QLKPNKISGLKSHDHHILMQQLLPIALRKVLPKHVRTPLIKLCTFFRELCSKVLNPQDLV 700
Query: 709 QLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAKVGGPVQYRWMYPIER 760
++ IA TLC LE IFPPSFF IM+HL +HLA+EA++ GPVQYRWMYPIER
Sbjct: 701 RMGKDIAKTLCDLEKIFPPSFFDIMMHLPIHLAYEAQIAGPVQYRWMYPIER 752
>pir||S23818 hypothetical protein Tnp2 - garden snapdragon transposable element
Tam1
Length = 752
Score = 790 bits (2041), Expect = 0.0
Identities = 402/772 (52%), Positives = 520/772 (67%), Gaps = 43/772 (5%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQNSQVSEKIWCPCTTCANCKSLSRTSVYEHLTNP 64
+ W+ SR +EEY G+++FL+FAF N ++ KI CPC C N + R + EHL
Sbjct: 8 KSWMHK-SRLTEEYENGLDQFLDFAFDNVCLNGKIICPCKQCKNALWMDRETAKEHLIID 66
Query: 65 RRGFLRGYKQWIFHGEKPVASSSTIEEPEHTEMEHDMDGLIHDVLASHTAEDPLFDDGER 124
GF++GY W+ HGE S + I+ E DM L+HD +D + + E
Sbjct: 67 --GFIKGYTHWVIHGEGSSNSQNNIQNERLNTFE-DMHNLVHDAFG--VEDDNINSEEEP 121
Query: 125 NPQVEEN--ANKFYRLVKDNEQILYPNCKKYSKLSFMVHLYHLKCLHGWSDKSFSMLLDL 182
N + E N A FY+L+ D +Q LYP CK +S+L F+V L+HLKCL WS+K+F+MLL+L
Sbjct: 122 NEEEEPNEEAKTFYKLLDDAQQELYPGCKDFSRLRFIVRLFHLKCLGKWSNKTFTMLLEL 181
Query: 183 LRDAFPEG-NVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTNDEVCPKCGASR 241
L++AFPE N LPKS+YE +K+I LGL KI ACPNDC+LY ++ ND+ C C SR
Sbjct: 182 LKEAFPEQTNSLPKSYYEVQKIIGALGLTCVKIDACPNDCMLYRKEHANDDACHVCNTSR 241
Query: 242 WKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRLFMSSKIAEAM 301
+ ++ SE+ ++ + +PAK+LR+FPLKPRLQRLF SSK A M
Sbjct: 242 Y------IEGENNSVSEEASSSKCKR------VPAKVLRYFPLKPRLQRLFTSSKTASFM 289
Query: 302 RWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNPFKTMSITHST 361
RWH++ R DG LRHP+DS W FD ++ FA DP N+RLGLA+DGFNPF+TMS+ HST
Sbjct: 290 RWHKEERTKDGQLRHPSDSPLWHAFDHQHPDFAEDPRNIRLGLAADGFNPFRTMSVAHST 349
Query: 362 *PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQELWENGLETFD 421
PVIL +N+PPWMCMK+ FF L+LLIPGP PGNNID Y+QPL++ELQELW G+ T+D
Sbjct: 350 WPVILTPYNIPPWMCMKEPFFFLTLLIPGPSPPGNNIDVYMQPLIEELQELW-GGVNTYD 408
Query: 422 AYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLRNGRKFCYMSH 481
A KE+F + AAL+WTIND+PAYANLSGWSTKG+ ACP C +T S++L+ K+CYM H
Sbjct: 409 ASAKENFNVRAALLWTINDYPAYANLSGWSTKGELACPSCHKDTCSKYLQKSHKYCYMGH 468
Query: 482 RRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGTAQLRQLDEIEDECLGDQAQ-------- 533
RR+L H +R + K FDG +E+R PI L G D + +E G +
Sbjct: 469 RRFLNRYHPYRKDTKSFDGNEEYRRAPIALTG-------DMVSEEITGFNIKFGKKVDDN 521
Query: 534 -----RWKKKSILFSLPYWKYNELRHNLDVMHIEKNVCDNIIGTLLNQEGKSKDNYKARA 588
WKK+SI F LPYWK + LRHN DVMHIEKNVC++IIGTLLN EG++KD+ +R
Sbjct: 522 PTLPLNWKKRSIFFDLPYWKDSLLRHNFDVMHIEKNVCESIIGTLLNLEGRTKDHENSRL 581
Query: 589 DLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKDDFLSVLKNVKAPDECSSNISRCV 648
DL DMGIRS LHP S + LP ACY M+ KEK+ +LK VK PD +SNISR V
Sbjct: 582 DLKDMGIRSELHP-ISLESGKHYLPAACYSMSKKEKEIVFEILKTVKVPDGYASNISRRV 640
Query: 649 QVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTSVLIDLCNFFKQICSKVLNVKFIE 708
Q++ KI GLKS+D H+LMQ+LLPIALR LP V + LI LC FF+++CSKVLN + +
Sbjct: 641 QLKPNKISGLKSHDHHILMQQLLPIALRKVLPKHVRTPLIKLCTFFRELCSKVLNPQDLV 700
Query: 709 QLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAKVGGPVQYRWMYPIER 760
++ IA TLC LE IFPPSFF IM+HL +HLA+EA++ GPVQYRWMYPIER
Sbjct: 701 RMGKDIAKTLCDLEKIFPPSFFDIMMHLPIHLAYEAQIAGPVQYRWMYPIER 752
>gb|AAP53328.1| putative TNP2-like transposon protein [Oryza sativa (japonica
cultivar-group)] gi|37533478|ref|NP_921041.1| putative
TNP2-like transposon protein [Oryza sativa (japonica
cultivar-group)] gi|20279447|gb|AAM18727.1| putative
TNP2-like transposon protein [Oryza sativa (japonica
cultivar-group)]
Length = 1571
Score = 751 bits (1938), Expect = 0.0
Identities = 401/877 (45%), Positives = 541/877 (60%), Gaps = 69/877 (7%)
Query: 13 RRSEEYIRGVNEFLEFAFQNSQVSEKIWCPCTTCANCKSLSRTSVYEHLTNPRRGFLRGY 72
R + EY+ GV +F+++AF + I CPC C N SL V HL G LR Y
Sbjct: 14 RLNHEYLEGVEKFIDYAFSKLDGVQVIRCPCIKCCNTYSLPHHIVSSHLK--AYGILRSY 71
Query: 73 KQWIFHGEKPVASSSTIEEPEHTEMEHDMDG------LIHDVLASHTA---EDPLFDDGE 123
W HGE + IE E+ E + +G L+ D+ ++ + +
Sbjct: 72 TFWYHHGEVLAEQENDIEVDEYDSQEFNGEGYNGMQDLMEDLFPQCNTPGGDEATHESTD 131
Query: 124 RNPQVEEN--ANKFYRLVKDNEQILYPNCKKYSKLSFMVHLYHLKCLHGWSDKSFSMLLD 181
+ P+ E N A KFY L+ Q LY + SKLS +V+L H+K L WS+KSF+ LL+
Sbjct: 132 QGPEEEPNTDAAKFYALLDKYNQPLYEG-SRISKLSALVNLLHVKNLGKWSNKSFTALLE 190
Query: 182 LLR-DAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTNDEVCPKCGAS 240
LLR D P + LP S+YE KK I ELGL Y KI AC NDC+LYW + + E C CG+S
Sbjct: 191 LLRKDFLPHDSTLPNSYYEAKKTIRELGLSYIKIDACKNDCMLYWKEDIDAESCKVCGSS 250
Query: 241 RWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRLFMSSKIAEA 300
RWK K + + K++ K IP K +R+FP+KPRLQRLFM K A
Sbjct: 251 RWKE----------KHTREIKHSSAGKK-----IPHKTMRYFPIKPRLQRLFMCRKTAAY 295
Query: 301 MRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNPFKTMSITHS 360
+WH++ R+D G +RHPADS AWK+FD + +FA +P NVRL LASDGF PF M ++S
Sbjct: 296 AKWHKECRVDGGVMRHPADSKAWKEFDKIHSSFASEPRNVRLCLASDGFQPFANMRTSYS 355
Query: 361 T*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQELWENGLETF 420
PV LV NLPPWMC+KQ MLS+L+PGP GPG+ ID YLQPL++EL ELWE+G++T+
Sbjct: 356 IWPVFLVPLNLPPWMCIKQQNVMLSMLLPGPDGPGDAIDVYLQPLIEELIELWEDGVDTY 415
Query: 421 DAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLRNGRKFCYMS 480
D+ K +F+L AAL+WT++DFPAY N+SG STKGK ACP C ET+S WL+ G+KFCYM
Sbjct: 416 DSSTKTNFKLRAALLWTVHDFPAYGNISGHSTKGKLACPVCHKETNSMWLKKGQKFCYMG 475
Query: 481 HRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGTAQLRQLDEIEDECL------------ 528
HR +L +H+WR + FDGT+E R PP+ L G L+Q+ +++ L
Sbjct: 476 HRCFLRRSHRWRNDRTSFDGTKESRGPPMELSGDDVLKQVQDLQGIILSKDMSKKTKVSR 535
Query: 529 GDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNVCDNIIGTLLNQEGKSKDNYKARA 588
D+ WKK+SI F LPY+K LRHNLDVMHIEKN+CD+IIGTL+N +GK+KDN R+
Sbjct: 536 SDRGDNWKKRSIFFELPYFKTLLLRHNLDVMHIEKNICDSIIGTLMNVKGKTKDNINTRS 595
Query: 589 DLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKDDFLSVLKNVKAPDECSSNISRCV 648
DL M +R LH P + ++LP A Y ++ +K LS K +K PD SSNISRCV
Sbjct: 596 DLKLMNLRPDLH--PVDDGGKVVLPPAPYTLSPDQKKALLSFFKELKVPDGFSSNISRCV 653
Query: 649 QVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTSVLIDLCNFFKQICSKVLNVKFIE 708
+++RK+ GLKS+DCHV++ +LP+ALRG LP+ + L++L FFK++ SK L+V+ +E
Sbjct: 654 NMKERKMSGLKSHDCHVILNHILPLALRGLLPENIYEPLVELSQFFKKLNSKALSVEQLE 713
Query: 709 QLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAKVGGPVQYRWMYPIERY*LCIFKL 768
++++QI + LC+LE FPPSFF +M+HL VHLA EA +GGP YRWMY ER
Sbjct: 714 EMDAQIPVILCKLEKEFPPSFFDVMMHLPVHLAREALIGGPTMYRWMYLFER-------- 765
Query: 769 IYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIAESFLANECLTFCSQYLSGVETRF 828
+I Y LKS VRN A PEGSIAE ++A+E +T S+YL VET+
Sbjct: 766 -----QIHY------------LKSLVRNMARPEGSIAEGYIADEFMTLSSRYLDDVETKH 808
Query: 829 SRPTRNDDEFDSTLDDGSFLHPMGRPLGRKRQQKFQL 865
+RP R D + S GRP+G ++ + +
Sbjct: 809 NRPGRIHDTSIGNKFNLSIFSCAGRPIGSRKTRDLDM 845
>gb|AAD55677.1| putative transposase protein [Zea mays]
Length = 793
Score = 717 bits (1850), Expect = 0.0
Identities = 368/826 (44%), Positives = 508/826 (60%), Gaps = 61/826 (7%)
Query: 15 SEEYIRGVNEFLEFAFQNSQVSEKIWCPCTTCANCKSLSRTSVYEHLTNPRRGFLRGY-K 73
+ E+ +F++ F + E CPC+ C +++ V HL RGF + +
Sbjct: 15 TNEWQTNFRKFIQTTFGGTTRGETAPCPCSRCRCMSYRTQSQVQSHLVI--RGFDESFIE 72
Query: 74 QWIFHGEKPVASSSTIEEPEHTEMEHDMDGLIHDVLASHTAEDPLFDDGERNPQVEENAN 133
+ + +++ + + T + L+ +++ ED + G+ N + A
Sbjct: 73 EGNQANDSDEGNAAAVVNDDETGDSGSVTELVSTLISGAIHEDII---GKINEEPNAKAK 129
Query: 134 KFYRLVKDNEQILYPNCKKYSKLSFMVHLYHLKCLHGWSDKSFSMLLDLLRDAFPEGNVL 193
F+ L+ + ++ LYP CK+ +K+SF+V L+ +KC+ G S + + +L L R PEG+ +
Sbjct: 130 AFFNLLTEAKKELYPGCKEVTKVSFIVRLFQIKCMFGLSKSALAAVLQLFRLVLPEGHCV 189
Query: 194 PKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTNDEVCPKCGASRWKTVTEEVQPNG 253
P + + +K+I +LGL Y+KIHAC NDC+L+ +Y + CP CG SRW QP
Sbjct: 190 PDTLDKVQKVIHDLGLDYQKIHACVNDCLLFRKEYAAMDTCPTCGESRW-------QPTI 242
Query: 254 TKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRLFMSSKIAEAMRWHRDGRLDDGF 313
+ E+ N P+ KILR+FP+ PRLQRL+M+S +E MRWH++G + D
Sbjct: 243 SGHHEEATNKRAPR---------KILRYFPVIPRLQRLYMNSTTSEYMRWHKEGLVQDNK 293
Query: 314 LRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNPFKTMSITHST*PVILVHFNLPP 373
+RHPADS AWK D+ Y+ FA DP N+RLGLASDGFNPF +++ ++ PVIL+ +NLPP
Sbjct: 294 MRHPADSKAWKHVDNIYKDFATDPRNIRLGLASDGFNPFGMVNVAYTIWPVILIPYNLPP 353
Query: 374 WMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQELWENGLETFDAYKKESFQLHAA 433
W+C+KQ F+MLS+LIPG PGNNID YLQPL+ EL++LWE G+ET+DA +K++F L A
Sbjct: 354 WLCLKQPFWMLSMLIPGKNSPGNNIDVYLQPLIDELKDLWEKGVETWDAKEKKNFNLRAI 413
Query: 434 LMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLRNGRKFCYMSHRRWLTPNHKWRL 493
L+WTINDFPAY LSGWSTKGK+ACP C +T WL+ G K CYM HRR+L +H+WR
Sbjct: 414 LLWTINDFPAYGMLSGWSTKGKFACPYCHKDTDFLWLKCGSKHCYMGHRRFLPMDHRWRK 473
Query: 494 NGKDFDGTQEFRDPPIRLDGTAQLRQLDEIEDECLGDQAQR------------WKKKSIL 541
N F+ T E R+PP+ L G L+Q + E G ++ W+KKSI
Sbjct: 474 NKASFNNTVETREPPVPLSGEGVLQQYESFEQITFGKSTRKRKQREEETRWHNWRKKSIF 533
Query: 542 FSLPYWKYNELRHNLDVMHIEKNVCDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHP 601
F L YW+ +RHNLDVMHIEKN+CD+I+GTLL EGKSKD KAR D+ +GIR H
Sbjct: 534 FELQYWEKLLVRHNLDVMHIEKNICDSILGTLLGMEGKSKDGEKARLDMEHLGIRKDQHI 593
Query: 602 QPSPNTNTMLLPRACYQMTTKEKDDFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSY 661
T LP A Y + E L+ VK PD +SNI R V V + K+ GLK++
Sbjct: 594 VLGNGKYT--LPSALYTLGKDEMIWLCQFLEGVKMPDGYASNIKRSVDVNKCKVSGLKTH 651
Query: 662 DCHVLMQELLPIALRGSLPDKVTSVLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQL 721
DCHV+ Q+LLPIA+R LP+ V LI L +F ICSK L+ + +EQL + I TLC+L
Sbjct: 652 DCHVIFQKLLPIAVRNVLPENVALPLIQLSRYFNAICSKELSAEDLEQLSTSIPETLCRL 711
Query: 722 ETIFPPSFFTIMVHLVVHLAHEAKVGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NY 781
E IFPP+FF IM+HL +HLA EAK+GGPV YRWMYPIERY
Sbjct: 712 EMIFPPAFFDIMIHLSIHLAEEAKLGGPVCYRWMYPIERY-------------------- 751
Query: 782 FFPRFLLTLKSFVRNKAYPEGSIAESFLANECLTFCSQYLSGVETR 827
L TLK++VRNKA+PEGSIAE ++ EC+TFCS++L VET+
Sbjct: 752 -----LRTLKAYVRNKAHPEGSIAEGYILEECMTFCSRFLQDVETK 792
>gb|AAP52603.1| putative transposon protein [Oryza sativa (japonica
cultivar-group)] gi|37532028|ref|NP_920316.1| putative
transposon protein [Oryza sativa (japonica
cultivar-group)] gi|22748425|gb|AAN05390.1| putative
transposon protein [Oryza sativa (japonica
cultivar-group)]
Length = 1620
Score = 659 bits (1700), Expect = 0.0
Identities = 364/805 (45%), Positives = 490/805 (60%), Gaps = 76/805 (9%)
Query: 76 IFHGEKPVASSSTIEEPEHTEM------EHD-MDGLIHDVLASHTAEDPLFDDGERNPQV 128
+FHGE SS + E+ E+ EHD + L+ D LA + F+D +
Sbjct: 1 MFHGE----GSSFVNSAEYDEVGDVESSEHDDISDLLRD-LACGLDDRGEFEDEGNSDVT 55
Query: 129 EENANKFYRLVKDNEQILYPNCKKYSKLSFMVHLYHLKCLHGWSDKSFSMLLDLLRDAFP 188
E+ N L D Q LYP C K+SKL F+V L H+K L GWSDKSF +LL+LL +AFP
Sbjct: 56 NEDLNALKMLSDDYGQELYPGCDKFSKLHFIVKLLHIKLLGGWSDKSFDLLLNLLIEAFP 115
Query: 189 EGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTNDEVCPKCGASRWKTVTEE 248
+G+ LPK++ E KK + L LGY IHAC NDCILYW N CPKC SRWK+ +
Sbjct: 116 KGSALPKNYNEAKKTVKCLRLGYVSIHACKNDCILYWKDDANANSCPKCETSRWKSENKS 175
Query: 249 VQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRLFMSSKIAEAMRWHRDGR 308
+ NG + + +P K+LR+FP+K R QRLF S+ A RWH + R
Sbjct: 176 L--NGKRIHK---------------VPNKVLRYFPIKRRFQRLFACSRTAALTRWHDEER 218
Query: 309 LDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNPFKTMSITHST*PVILVH 368
DG +RHPADS WK FD K+ FA DP N+R LA+DGFNPF++M+I++S PVI++
Sbjct: 219 TQDGLVRHPADSPLWKDFDHKHPEFASDPRNIRCALATDGFNPFRSMNISYSIWPVIIIP 278
Query: 369 FNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQELWENGLETFDAYKKESF 428
+N PPW+CMKQ F++SLLIPG PG+++D +++PLV ++ +++ +G+ TFDA K E F
Sbjct: 279 YNFPPWICMKQPNFIISLLIPGRYAPGSDMDVFMEPLVDDMYDMFVHGVRTFDASKGEYF 338
Query: 429 QLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLRNGRKFCYMSHRRWLTPN 488
QL AA++ TI+D+P ++G +T G+ AC C T S L+NG K YM HRR+L N
Sbjct: 339 QLRAAILCTISDYPGLGYVAGCTTSGEGACIECHQFTRSLRLKNGSKTSYMGHRRFLHAN 398
Query: 489 HKWRLNGKDFDGTQEFRDPPIRLDGTAQLRQLDEIEDEC----------------LGDQA 532
H +R + FDG E P+ L G L+Q + ++ G+
Sbjct: 399 HPFRFDADSFDGVVELESAPVPLSGKEILKQTEGMQTSFGKDPSGKKVTKKRKRKEGEPI 458
Query: 533 QRWKKKSILFSLPYWKYNELRHNLDVMHIEKNVCDNIIGTLLNQEGKSKDNYKARADLVD 592
WK++SI F LPYWK LRHNLDVMHIEKNVCDNII TLL + KSKDN + DL
Sbjct: 459 NIWKRRSIWFKLPYWKDLLLRHNLDVMHIEKNVCDNIINTLLGTDKKSKDNLNSWLDLQA 518
Query: 593 MGIRSILHPQPSPNTNTMLLPRACYQMTTKEKDDFLSVLKNVKAPDECSSNISRCVQVQQ 652
+GIRS LH P + LP A Y M ++EK F VL VK PD +S+I R VQV +
Sbjct: 519 LGIRSDLH--PIEVEDKFYLPPAPYSMNSEEKKLFCKVLNGVKFPDGYASDIRRNVQVNE 576
Query: 653 RKIFGLKSYDCHVLMQELLPIALRGSLPDKVTSVLIDLCNFFKQICSKVLNVKFIEQLES 712
+KI GLKS+D HV++Q+LLP+A+R LP+ V++ LI + NFFKQI S V+ V +++LE+
Sbjct: 577 KKIIGLKSHDNHVILQQLLPLAVRRILPENVSAALIRVSNFFKQIYSPVIRVSDMQKLEA 636
Query: 713 QIAITLCQLETIFPPSFFTIMVHLVVHLAHEAKVGGPVQYRWMYPIERY*LCIFKLIYFN 772
+IA T+C LE IF PSFFTIM+HL+VHL +A++ GPV +R MYP E
Sbjct: 637 EIAETICLLEKIFLPSFFTIMIHLMVHLPAQARIAGPVHFRNMYPGE------------- 683
Query: 773 VRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIAESFLANECLTFCSQYLSGVETRFSRPT 832
RFL+ K +VR +++PEGSIAES+L +E LTFCS+YL GV TRF+R
Sbjct: 684 ------------RFLMRCKGYVRTRSHPEGSIAESYLFDESLTFCSRYLHGV-TRFTRRV 730
Query: 833 RNDDEFDSTLDDGSFLHPMGRPLGR 857
RND+ + + P R +GR
Sbjct: 731 RNDEGLPMEVQSTT---PFFRNIGR 752
>ref|XP_474883.1| OSJNBa0021F22.10 [Oryza sativa (japonica cultivar-group)]
gi|38346477|emb|CAE03716.2| OSJNBa0021F22.10 [Oryza
sativa (japonica cultivar-group)]
Length = 1078
Score = 638 bits (1646), Expect = 0.0
Identities = 343/857 (40%), Positives = 492/857 (57%), Gaps = 84/857 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CGASR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 241 DVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKR 524
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 525 KVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 584
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 585 CESLVGLLLN-PGSTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 642
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R LP KV
Sbjct: 643 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRNILPPKVRH 702
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 703 TIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 762
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 763 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 797
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 798 ESYTTEEAIEFCVDYMS 814
>gb|AAX95206.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
(japonica cultivar-group)] gi|62733008|gb|AAX95127.1|
transposon protein, putative, CACTA, En/Spm sub-class
[Oryza sativa (japonica cultivar-group)]
Length = 1095
Score = 638 bits (1646), Expect = 0.0
Identities = 344/857 (40%), Positives = 492/857 (57%), Gaps = 84/857 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CGASR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 241 DVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKR 524
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 525 KVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 584
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 585 CESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 642
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ ELLP+A+R LP KV
Sbjct: 643 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITELLPVAIRNILPPKVRH 702
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 703 TIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 762
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 763 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 797
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 798 ESYTTEEAIEFCVDYMS 814
>ref|NP_915890.1| putative retrotransposable elements TNP2 [Oryza sativa (japonica
cultivar-group)]
Length = 1095
Score = 637 bits (1644), Expect = 0.0
Identities = 344/857 (40%), Positives = 492/857 (57%), Gaps = 84/857 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CGASR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 241 DVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKR 524
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 525 KVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 584
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 585 CESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 642
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLPIA+R LP KV
Sbjct: 643 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPIAIRNILPPKVRH 702
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 703 TIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 762
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 763 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 797
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 798 ESYTTEEAIEFCVDYMS 814
>ref|XP_471076.1| OSJNBb0089K24.2 [Oryza sativa (japonica cultivar-group)]
gi|21740606|emb|CAD39393.1| OSJNBb0089K24.2 [Oryza
sativa (japonica cultivar-group)]
Length = 1095
Score = 637 bits (1643), Expect = 0.0
Identities = 343/857 (40%), Positives = 492/857 (57%), Gaps = 84/857 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CGASR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 241 DVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKR 524
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 525 KVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 584
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 585 CESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 642
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R LP KV
Sbjct: 643 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRNILPPKVRH 702
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 703 TIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 762
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 763 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 797
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 798 ESYTTEEAIEFCVDYMS 814
>ref|NP_908869.1| B1151H08.16 [Oryza sativa (japonica cultivar-group)]
Length = 1095
Score = 636 bits (1640), Expect = e-180
Identities = 342/857 (39%), Positives = 492/857 (56%), Gaps = 84/857 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K++KLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHNKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CGASR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 241 DVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKR 524
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 525 KVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 584
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 585 CESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 642
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R LP KV
Sbjct: 643 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRNILPPKVRH 702
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 703 TIQRLCSFFHAIGQKIIDPEGLDELQAELVKTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 762
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 763 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 797
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 798 ESYTTEEAIEFCVDYMS 814
>emb|CAE03273.1| OSJNBa0011J08.28 [Oryza sativa (japonica cultivar-group)]
gi|38345863|emb|CAD41160.2| OSJNBa0064M23.5 [Oryza
sativa (japonica cultivar-group)]
gi|50928209|ref|XP_473632.1| OSJNBa0011J08.28 [Oryza
sativa (japonica cultivar-group)]
Length = 1095
Score = 634 bits (1634), Expect = e-180
Identities = 342/858 (39%), Positives = 494/858 (56%), Gaps = 86/858 (10%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CG SR+K E + + +K G PAK++ + P R++R+
Sbjct: 241 DVCPICGGSRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPTAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDG------------------ 513
+ K YM HRR+L H +R K+F+G ++ PP L G
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGIEVHNLVMGITNEFGKKR 524
Query: 514 ---------TAQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKN 564
T++ + + +E + +++ WKKKSI + LPYWK E+RH +D+MH+EKN
Sbjct: 525 KVGKRKEKSTSKEKTEEHVEKQKTKERSM-WKKKSIFWRLPYWKDLEVRHCIDLMHVEKN 583
Query: 565 VCDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEK 624
VC++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 584 VCESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEK 641
Query: 625 DDFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVT 684
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R LP KV
Sbjct: 642 IDLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRNILPPKVR 701
Query: 685 SVLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEA 744
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL +
Sbjct: 702 HTIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQT 761
Query: 745 KVGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSI 804
K GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 762 KCCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSI 796
Query: 805 AESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 797 IESYTTEEAIEFCVDYMS 814
>gb|AAT77012.1| putative Transposase family tnp2 protein [Oryza sativa (japonica
cultivar-group)]
Length = 1095
Score = 634 bits (1634), Expect = e-180
Identities = 341/857 (39%), Positives = 490/857 (56%), Gaps = 84/857 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKPV---ASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ V A+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEVPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CG SR+K E + + +K G P K++ + P+ R++R+
Sbjct: 241 DVCPICGTSRYKRAKSEGEGSKSKR----------------GGPVKVVWYLPIAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSDDPRNMRFAMCTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMKETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKR 524
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 525 KVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 584
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 585 CESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 642
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R LP KV
Sbjct: 643 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRNILPPKVRH 702
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 703 TIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 762
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 763 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 797
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 798 ESYTTEEAIEFCVDYMS 814
>gb|AAV32149.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1095
Score = 632 bits (1630), Expect = e-179
Identities = 340/857 (39%), Positives = 491/857 (56%), Gaps = 84/857 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 120
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 121 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 180
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 181 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 240
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CGASR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 241 DVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 284
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +DG NP
Sbjct: 285 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSKDPRNMRFAICTDGINP 344
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV++V++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 345 FGDLSSRHSTWPVLIVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 404
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 405 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 464
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 465 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTKVHNLLMGITNEFGKKR 524
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+++E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 525 KVGKRKEKSTSKEKIEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 584
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 585 CESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 642
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+D HVL+ +LLP+A+R LP KV
Sbjct: 643 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDYHVLITQLLPVAIRNILPPKVRH 702
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ C+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 703 TIQRFCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 762
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 763 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 797
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 798 ESYTTEEAIEFCVDYMS 814
>gb|AAX95188.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
(japonica cultivar-group)]
Length = 1684
Score = 619 bits (1597), Expect = e-175
Identities = 341/881 (38%), Positives = 498/881 (55%), Gaps = 86/881 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHTHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKPVASSSTIEEPEHTEMEHDM---DGL-IHDVLASHTAE-- 115
GF++ Y W HGE+ A +EE ++E+ +G+ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQE-APDVAVEEVLDQDVENTAAAREGMFVPSPLGGETIDLD 119
Query: 116 ----DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHG 170
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +G
Sbjct: 120 TQCLSIMLHDIEDAEDNDRDFEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNG 179
Query: 171 WSDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTN 230
WS KSF+ LL+LL+D PEGN L ++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 180 WSFKSFTELLELLKDLLPEGNNLLQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYAD 239
Query: 231 DEVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQR 290
+VCP CGASR+K E + + +K G PAK++ + P+ R++R
Sbjct: 240 LDVCPICGASRYKRAKSEDEGSKSKR----------------GGPAKVVWYLPIAERMKR 283
Query: 291 LFMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFN 350
+F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ D N+R + ++G N
Sbjct: 284 MFANKEQAKLVRWHAEERKVDSMLRHPADSVQWRTIDRIYQEFSNDRRNMRFAMCTNGIN 343
Query: 351 PFKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQ 410
PF +S HST PV+LV +NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 344 PFGDLSSRHSTWPVLLVKYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFE 403
Query: 411 ELWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWL 470
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL
Sbjct: 404 RLWNEGTRTWDAYAQEYFNLHAILFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWL 463
Query: 471 RNGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT---------------- 514
++ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 464 KHSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPAELTGTEVHNLVMGITNEFGKK 523
Query: 515 ----------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKN 564
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKN
Sbjct: 524 RKVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKN 583
Query: 565 VCDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEK 624
VC++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 584 VCESLMGLLLNP-GTTKDGLNARRDLEDMGVRSELHPITT-ESGRVYLPPACYTLSKEEK 641
Query: 625 DDFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVT 684
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R P K+
Sbjct: 642 IDLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRNIFPPKMR 701
Query: 685 SVLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEA 744
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL +
Sbjct: 702 HTIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQT 761
Query: 745 KVGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSI 804
K GP MYP ERY + L +VRN+++PEGSI
Sbjct: 762 KCCGPAFMTQMYPCERY-------------------------MGILNGYVRNRSHPEGSI 796
Query: 805 AESFLANECLTFCSQYLSGVETRFSRPTRNDDEFDSTLDDG 845
ES+ E + FC Y+S + + ++ D DG
Sbjct: 797 IESYTTEEVIDFCVDYMSETSSIGLPRSHHEGRLDGVGTDG 837
>gb|AAX96657.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
(japonica cultivar-group)]
Length = 1652
Score = 619 bits (1597), Expect = e-175
Identities = 341/881 (38%), Positives = 498/881 (55%), Gaps = 86/881 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 3 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHTHL 62
Query: 62 TNPRRGFLRGYKQWIFHGEKPVASSSTIEEPEHTEMEHDM---DGL-IHDVLASHTAE-- 115
GF++ Y W HGE+ A +EE ++E+ +G+ + L T +
Sbjct: 63 I--MNGFMKKYTCWTKHGEQE-APDVAVEEVLDQDVENTAAAREGMFVPSPLGGETIDLD 119
Query: 116 ----DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHG 170
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +G
Sbjct: 120 TQCLSIMLHDIEDAEDNDRDFEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNG 179
Query: 171 WSDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTN 230
WS KSF+ LL+LL+D PEGN L ++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 180 WSFKSFTELLELLKDLLPEGNNLLQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYAD 239
Query: 231 DEVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQR 290
+VCP CGASR+K E + + +K G PAK++ + P+ R++R
Sbjct: 240 LDVCPICGASRYKRAKSEDEGSKSKR----------------GGPAKVVWYLPIAERMKR 283
Query: 291 LFMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFN 350
+F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ D N+R + ++G N
Sbjct: 284 MFANKEQAKLVRWHAEERKVDSMLRHPADSVQWRTIDRIYQEFSNDRRNMRFAMCTNGIN 343
Query: 351 PFKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQ 410
PF +S HST PV+LV +NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 344 PFGDLSSRHSTWPVLLVKYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFE 403
Query: 411 ELWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWL 470
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL
Sbjct: 404 RLWNEGTRTWDAYAQEYFNLHAILFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWL 463
Query: 471 RNGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT---------------- 514
++ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 464 KHSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPAELTGTEVHNLVMGITNEFGKK 523
Query: 515 ----------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKN 564
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKN
Sbjct: 524 RKVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKN 583
Query: 565 VCDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEK 624
VC++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 584 VCESLMGLLLNP-GTTKDGLNARRDLEDMGVRSELHPITT-ESGRVYLPPACYTLSKEEK 641
Query: 625 DDFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVT 684
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R P K+
Sbjct: 642 IDLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRNIFPPKMR 701
Query: 685 SVLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEA 744
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL +
Sbjct: 702 HTIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQT 761
Query: 745 KVGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSI 804
K GP MYP ERY + L +VRN+++PEGSI
Sbjct: 762 KCCGPAFMTQMYPCERY-------------------------MGILNGYVRNRSHPEGSI 796
Query: 805 AESFLANECLTFCSQYLSGVETRFSRPTRNDDEFDSTLDDG 845
ES+ E + FC Y+S + + ++ D DG
Sbjct: 797 IESYTTEEVIDFCVDYMSETSSIGLPRSHHEGRLDGVGTDG 837
>gb|AAX96162.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
(japonica cultivar-group)]
Length = 1044
Score = 618 bits (1593), Expect = e-175
Identities = 333/832 (40%), Positives = 476/832 (57%), Gaps = 65/832 (7%)
Query: 13 RRSEEYIRGVNEFLEFAFQNS--QVSEKIWCPCTTCANCKSLS-RTSVYEHLTNPRRGFL 69
R+ +EY G+ F++ A ++ + + + CPC+ C N L V+ HL RRGF+
Sbjct: 13 RQYKEYRDGILSFMKAAVEDRIRRNDKYMCCPCSDCRNEIWLDDEKEVHAHLI--RRGFM 70
Query: 70 RGYKQWIFHGEKPVASSSTIEEPEHTEMEHDMDGLIHDVLASHTAEDPLFD--------- 120
+ Y W+ HGE+ + + + + + D HD+ D + D
Sbjct: 71 KRYTCWVKHGEQDLGTDGVAADGSGADNHEEGDEDEHDMFVPSPLGDEMVDVDPDMLQDM 130
Query: 121 --DGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGWSDKSFS 177
D + E ++ KF RLV D+E LY CK K++KLS + L LK GWSDKSF+
Sbjct: 131 LRDVDDPAINERDSMKFSRLVSDSETPLYAGCKPKHTKLSATLDLMKLKASSGWSDKSFT 190
Query: 178 MLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTNDEVCPKC 237
LL +L+D P+ N LP++ YE KK++ LGL +IHACPNDCILY +Y + + CP C
Sbjct: 191 ELLGILKDMLPQENTLPETTYEAKKVLCPLGLEVRRIHACPNDCILYHKQYADLDACPVC 250
Query: 238 GASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRLFMSSKI 297
ASR+K Q +K K G PAK++ + P+ R +R+F +S
Sbjct: 251 KASRYK------QKKSAGEGKKSKR----------GGPAKVVWYLPIIDRFKRIFANSNE 294
Query: 298 AEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNPFKTMSI 357
A+ +RWH R +DG LRHPADS+ W+ D K++ FA DP N+R+ L +DG NPF MS
Sbjct: 295 AKLVRWHATERRNDGLLRHPADSIQWRNIDRKHKDFAADPRNMRICLCTDGMNPFGDMSS 354
Query: 358 THST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQELWENGL 417
+HST PV++ +FNLPPW+C K+ + ML LLI GP+ PGN+ID +L+P++ +L+ LW+ G+
Sbjct: 355 SHSTWPVLIANFNLPPWLCFKRKYIMLCLLIQGPRQPGNDIDVFLEPVIDDLEILWKEGV 414
Query: 418 ETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLRNGRKFC 477
ET+DA +E+F L L TIND+PA NLSG + KGK AC C T S+WL+ RK
Sbjct: 415 ETWDASGQENFTLRVLLFCTINDYPALGNLSGQTVKGKKACSDCMEHTRSRWLKKSRKIV 474
Query: 478 YMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGTAQLRQLDEIEDE-------CLGD 530
YM HRRWL H +R K F+G +E P L G + +I +E D
Sbjct: 475 YMGHRRWLPLRHAFRRKKKIFNGKKELGSAPADLSGDQVQNMVKDITNEFRKKRKRSKED 534
Query: 531 QAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNVCDNIIGTLLNQEGKSKDNYKARADL 590
+ + WKKKSI + LPYW+ E+RH +D+MH+EKNVCDN++G LLN GK+KD AR DL
Sbjct: 535 KKRMWKKKSIFWQLPYWEDLEVRHCIDLMHVEKNVCDNLLGLLLNMPGKTKDGLNARLDL 594
Query: 591 VDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKDDFLSVLKNVKAPDECSSNISRCVQV 650
+M IRS L P T + LP AC+ ++ EK LS L N+K P + IS+ V++
Sbjct: 595 QEMNIRSELQPVTDEKTGRVYLPPACHTLSKDEKIAMLSCLANIKVPSGYCTRISKYVKL 654
Query: 651 QQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTSVLIDLCNFFKQICSKVLNVKFIEQL 710
+ K+ G+KS+DCHVL+ ++LP+A+RG LP +V + LC FF I K+++ + ++ L
Sbjct: 655 EDLKLVGMKSHDCHVLITQILPVAIRGILPPQVRHTIQRLCAFFNAIGQKIIDPEDLDGL 714
Query: 711 ESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAKVGGPVQYRWMYPIERY*LCIFKLIY 770
++ I TLC LE FP +FF I+V L VHL + K+ GP R M+P ERY
Sbjct: 715 QADIVSTLCHLEIYFPLAFFDIIVDLTVHLVKQTKICGPAFMREMWPFERY--------- 765
Query: 771 FNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIAESFLANECLTFCSQYLS 822
+ LKS+V+N+A P GSI E E + F Y++
Sbjct: 766 ----------------MGILKSYVQNRAKPGGSIIEGNTTEEAIEFYIDYMA 801
>gb|AAT85098.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 974
Score = 610 bits (1573), Expect = e-173
Identities = 332/831 (39%), Positives = 479/831 (56%), Gaps = 82/831 (9%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 7 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 66
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 67 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQGVENTAAAREGMFVPSPLGGETIDLDT 124
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK ++GW
Sbjct: 125 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKAINGW 184
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCILY+ +Y +
Sbjct: 185 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCILYYKEYADL 244
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CG SR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 245 DVCPICGGSRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 288
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + +D NP
Sbjct: 289 FANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTDDINP 348
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLP W+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 349 FGDLSSRHSTWPVLLVNYNLPLWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 408
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 409 LWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 468
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGTAQLRQLDEIEDECLGDQ 531
+ K YM HRR+L P K + A R+ + ++ +
Sbjct: 469 HSHKTVYMGHRRFL-PRGKLESEKR-----------------RAHRRKKQKTKERSM--- 507
Query: 532 AQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNVCDNIIGTLLNQEGKSKDNYKARADLV 591
WKKKSI + LPYWK E+RH +D+MH++KNVC++++G LLN G +KD AR DL
Sbjct: 508 ---WKKKSIFWRLPYWKDLEVRHCIDLMHVKKNVCESLMGLLLNP-GTTKDGLNARRDLE 563
Query: 592 DMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKDDFLSVLKNVKAPDECSSNISRCVQVQ 651
DMG+RS LHP + + + LP ACY ++ +EK D L+ L +K P SS ISR V +Q
Sbjct: 564 DMGVRSELHPITT-ESGRVYLPPACYTLSKEEKIDLLTCLSGIKVPSGYSSRISRLVSLQ 622
Query: 652 QRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTSVLIDLCNFFKQICSKVLNVKFIEQLE 711
K+ G+KS+DCHVL+ +LLP+A+R LP KV + LC+FF I K+++ + +++L+
Sbjct: 623 DLKLVGMKSHDCHVLITQLLPVAIRNILPPKVRHPIQRLCSFFHAIGQKIIDPEGLDKLQ 682
Query: 712 SQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAKVGGPVQYRWMYPIERY*LCIFKLIYF 771
+++ TLC LE FPP+FF IM HL VHL + K GP MYP ERY
Sbjct: 683 AELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTKCCGPAFMTQMYPCERY---------- 732
Query: 772 NVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIAESFLANECLTFCSQYLS 822
L LK +VRN+++PEGSI ES+ E + FC Y+S
Sbjct: 733 ---------------LGILKGYVRNRSHPEGSIIESYTTEEAIEFCVDYMS 768
>ref|NP_918326.1| putative TNP2 [Oryza sativa (japonica cultivar-group)]
Length = 1045
Score = 605 bits (1561), Expect = e-171
Identities = 322/805 (40%), Positives = 465/805 (57%), Gaps = 81/805 (10%)
Query: 54 RTSVYEHLTNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLA 110
+ V+ HL GF++ Y W HGE+ VA+ +++ + L
Sbjct: 5 KDEVHAHLI--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLG 62
Query: 111 SHTAE------DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLY 163
T + + D E + + + KF +LV+D + LY CK K+SKLS ++ L
Sbjct: 63 GETIDLDTQCLSTMLHDIEDSEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELM 122
Query: 164 HLKCLHGWSDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCIL 223
LK +GWSDK+F+ LL+LL+D PEGN LP++ YE K+++ LGL +IHACPNDCIL
Sbjct: 123 KLKASNGWSDKNFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGLEVRRIHACPNDCIL 182
Query: 224 YWDKYTNDEVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFP 283
Y+ +Y + +VCP CGASR+K E + + +K G PAK++ + P
Sbjct: 183 YYKEYADLDVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLP 226
Query: 284 LKPRLQRLFMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLG 343
+ R++R+F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R
Sbjct: 227 IAERMKRMFANKEQAKLVRWHAEERKVDTMLRHPADSVQWRTIDRIYQEFSNDPRNMRFA 286
Query: 344 LASDGFNPFKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQ 403
+ +DG NPF +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+
Sbjct: 287 MCTDGINPFGDLSSRHSTWPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLE 346
Query: 404 PLVKELQELWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGF 463
P++ + + LW G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C
Sbjct: 347 PIIDDFERLWNEGTRTWDAYAQEYFNLHAMLFCTINDYPALGNLSGQTVKGKWACSECME 406
Query: 464 ETSSQWLRNGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT--------- 514
ET S+WL++ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 407 ETRSKWLKHSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPTELTGTEVHNLVMGI 466
Query: 515 -----------------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLD 557
+ +E ++ + WKKKSI + LPYWK E+RH +D
Sbjct: 467 TNEFGKKRKVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCID 526
Query: 558 VMHIEKNVCDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACY 617
+MH+EKNVC++++G LLN G +KD AR DL DMG+RS LHP + + + LP A Y
Sbjct: 527 LMHVEKNVCESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPAWY 584
Query: 618 QMTTKEKDDFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRG 677
++ +EK D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLP+A+R
Sbjct: 585 TLSKEEKIDLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPVAIRN 644
Query: 678 SLPDKVTSVLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLV 737
LP KV + LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL
Sbjct: 645 ILPPKVRHTIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLP 704
Query: 738 VHLAHEAKVGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNK 797
VHL + K GP MYP ERY L LK +VRN+
Sbjct: 705 VHLVRQTKCCGPAFMTQMYPCERY-------------------------LGILKGYVRNR 739
Query: 798 AYPEGSIAESFLANECLTFCSQYLS 822
++PEGSI ES+ E + FC Y+S
Sbjct: 740 SHPEGSIIESYTTEEAIEFCVDYMS 764
>gb|AAX96209.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
(japonica cultivar-group)] gi|62732737|gb|AAX94856.1|
transposon protein, putative, CACTA, En/Spm sub-class
[Oryza sativa (japonica cultivar-group)]
Length = 1100
Score = 601 bits (1550), Expect = e-170
Identities = 332/857 (38%), Positives = 481/857 (55%), Gaps = 100/857 (11%)
Query: 5 REWIRDPSRRSEEYIRGVNEFLEFAFQN--SQVSEKIWCPCTTCANCKSLS-RTSVYEHL 61
R W+ R S EY GV EF+ FA + S++S + CPC C N + + + V+ HL
Sbjct: 13 RRWMYYAHRSSTEYREGVTEFVTFADNDRKSRMSMHMLCPCRDCKNEQMIEDKDEVHAHL 72
Query: 62 TNPRRGFLRGYKQWIFHGEKP---VASSSTIEEPEHTEMEHDMDGLIHDVLASHTAE--- 115
GF++ Y W HGE+ VA+ +++ + L T +
Sbjct: 73 I--MNGFMKKYTCWTKHGEQEAPDVAAEEVLDQDVENTAAAREGMFVPSPLGGETIDLDT 130
Query: 116 ---DPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCK-KYSKLSFMVHLYHLKCLHGW 171
+ D E + + KF +LV+D + LY CK K+SKLS ++ L LK +GW
Sbjct: 131 QCLSTMLHDIEDAEDNDRDYEKFSKLVEDCQMPLYDGCKSKHSKLSCVLELMKLKASNGW 190
Query: 172 SDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHACPNDCILYWDKYTND 231
SDKSF+ LL+LL+D PEGN LP++ YE K+++ LGL ++Y +
Sbjct: 191 SDKSFTELLELLKDLLPEGNNLPQTTYEAKQVLCPLGL----------------EEYADL 234
Query: 232 EVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAKILRWFPLKPRLQRL 291
+VCP CGASR+K E + + +K G PAK++ + P+ R++R+
Sbjct: 235 DVCPICGASRYKRAKSEGEGSKSKR----------------GGPAKVVWYLPIAERMKRM 278
Query: 292 FMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDPHNVRLGLASDGFNP 351
F + + A+ +RWH + R D LRHPADS+ W+ D YQ F+ DP N+R + ++G NP
Sbjct: 279 FANKEQAKLVRWHAEERKVDSMLRHPADSVQWRTIDRIYQEFSNDPRNMRFAMCTNGINP 338
Query: 352 FKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNNIDTYLQPLVKELQE 411
F +S HST PV+LV++NLPPW+C K+ + ML++LI GP+ PGN+ID +L+P++ + +
Sbjct: 339 FGDLSSRHSTLPVLLVNYNLPPWLCFKRKYIMLAMLIQGPRQPGNDIDVFLEPIIDDFER 398
Query: 412 LWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYACPCCGFETSSQWLR 471
LW+ G T+DAY +E F LHA L TIND+PA NLSG + KGK+AC C ET S+WL+
Sbjct: 399 LWDEGTRTWDAYAQEYFNLHAILFCTINDYPALGNLSGQTVKGKWACSECMEETRSKWLK 458
Query: 472 NGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGT----------------- 514
+ K YM HRR+L H +R K+F+G ++ PP L GT
Sbjct: 459 HSHKTVYMGHRRFLPRYHPYRNMRKNFNGHRDTAGPPAELTGTEVHNLVMGITNEFGKKR 518
Query: 515 ---------AQLRQLDEIEDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHIEKNV 565
+ +E ++ + WKKKSI + LPYWK E+RH +D+MH+EKNV
Sbjct: 519 KVGKRKEKSTSKEKTEEHVEKQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNV 578
Query: 566 CDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTTKEKD 625
C++++G LLN G +KD AR DL DMG+RS LHP + + + LP ACY ++ +EK
Sbjct: 579 CESLMGLLLN-PGTTKDGLNARRDLEDMGVRSELHP-ITTESGRVYLPPACYTLSKEEKI 636
Query: 626 DFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPDKVTS 685
D L+ L +K P SS ISR V +Q K+ G+KS+DCHVL+ +LLPIA+R LP KV
Sbjct: 637 DLLTCLSGIKVPSGYSSRISRLVSLQDLKLVGMKSHDCHVLITQLLPIAIRNILPPKVRH 696
Query: 686 VLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLAHEAK 745
+ LC+FF I K+++ + +++L++++ TLC LE FPP+FF IM HL VHL + K
Sbjct: 697 TIQRLCSFFHAIGQKIIDPEGLDELQAELVRTLCHLEMYFPPTFFDIMEHLPVHLVRQTK 756
Query: 746 VGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPEGSIA 805
GP MYP ERY L LK +VRN+++PEGSI
Sbjct: 757 CCGPAFMTQMYPCERY-------------------------LGILKGYVRNRSHPEGSII 791
Query: 806 ESFLANECLTFCSQYLS 822
ES+ E + FC Y+S
Sbjct: 792 ESYTTEEAIEFCVDYMS 808
>gb|AAP53710.1| putative TNP-like transposable element [Oryza sativa (japonica
cultivar-group)] gi|37534242|ref|NP_921423.1| putative
TNP-like transposable element [Oryza sativa (japonica
cultivar-group)]
Length = 1522
Score = 601 bits (1549), Expect = e-170
Identities = 335/778 (43%), Positives = 449/778 (57%), Gaps = 121/778 (15%)
Query: 100 DMDGLIHDVLASH--TAEDPLFDDGERNPQVEENANKFYRLVKDNEQILYPNCKKYSKLS 157
DMD ++ D L + A + D GE + E+A KFY+L D Q LYP K SKL
Sbjct: 12 DMDAMLRDGLGFNDFNAVEGDGDVGEHS----EDAEKFYKLAADASQDLYPR-SKMSKLQ 66
Query: 158 FMVHLYHLKCLHGWSDKSFSMLLDLLRDAFPEGNVLPKSFYETKKMISELGLGYEKIHAC 217
F++ L H+K L GWS+ SF LL L ++AFP LP +F+ K++ LGLGY I AC
Sbjct: 67 FIIKLLHVKFLGGWSNSSFDELLVLFKEAFPMEGQLPDNFHAANKIVKSLGLGYINIDAC 126
Query: 218 PNDCILYWDKYTNDEVCPKCGASRWKTVTEEVQPNGTKTSEKQKNTPLPKSVPLPGIPAK 277
NDCIL+ +Y N + CP+C SRWK E++ +G + + +P K
Sbjct: 127 KNDCILFRKEYENAKTCPRCNTSRWKV--EKIGIDGKRVHK---------------VPQK 169
Query: 278 ILRWFPLKPRLQRLFMSSKIAEAMRWHRDGRLDDGFLRHPADSLAWKKFDSKYQTFALDP 337
+LR+FPLK RLQRLFMS K A MRWH +GR DG LRHPADS AWK D + F +
Sbjct: 170 VLRYFPLKKRLQRLFMSEKTASDMRWHAEGRTKDGLLRHPADSPAWKNLDQQCPIFGAES 229
Query: 338 HNVRLGLASDGFNPFKTMSITHST*PVILVHFNLPPWMCMKQSFFMLSLLIPGPKGPGNN 397
N+RL LA DGFNPF MS++HST PV+L+ +N PPW+CMKQ F+LSLLIPGP PGN+
Sbjct: 230 RNIRLALAIDGFNPFGNMSVSHSTWPVVLIPYNPPPWLCMKQHNFILSLLIPGPTQPGND 289
Query: 398 IDTYLQPLVKELQELWENGLETFDAYKKESFQLHAALMWTINDFPAYANLSGWSTKGKYA 457
+D Y +PLV EL +L++ G++T+D + E FQL AA+++TI D P +SG T GK+A
Sbjct: 290 MDVYFEPLVDELLDLFKQGVKTYDVSRDEWFQLRAAILYTITDLPGLGYVSGHLTSGKFA 349
Query: 458 CPCCGFETSSQWLRNGRKFCYMSHRRWLTPNHKWRLNGKDFDGTQEFRDPPIRLDGTAQL 517
C C T S +L+ GRK CY+ HR +R + K FDGT+E RD P++ G L
Sbjct: 350 CQHCHINTCSLYLKKGRKTCYLGHR-------SFRFDEKSFDGTKELRDAPVQPSGHDIL 402
Query: 518 RQLDEI----------------EDECLGDQAQRWKKKSILFSLPYWKYNELRHNLDVMHI 561
++ + + +D G WKK+S F LPYW++ +RHNLD+MHI
Sbjct: 403 KETENLNVVFGKAKKKKRKRKDDDNNDGGSTVIWKKRSYFFRLPYWEHLLVRHNLDIMHI 462
Query: 562 EKNVCDNIIGTLLNQEGKSKDNYKARADLVDMGIRSILHPQPSPNTNTMLLPRACYQMTT 621
EKNVCDNI+ TLLN + K + + LP A + ++
Sbjct: 463 EKNVCDNIVNTLLNVDRKGQ----------------------------VFLPPAAFFLSA 494
Query: 622 KEKDDFLSVLKNVKAPDECSSNISRCVQVQQRKIFGLKSYDCHVLMQELLPIALRGSLPD 681
EK F VLK+VK PD +SNIS + LLP+A+R LP+
Sbjct: 495 HEKKLFCQVLKDVKFPDGYASNISN---------------------KYLLPLAIRRILPE 533
Query: 682 KVTSVLIDLCNFFKQICSKVLNVKFIEQLESQIAITLCQLETIFPPSFFTIMVHLVVHLA 741
V LI L NFF+++ S V+ + +E+LE +IA T+CQLE IFP SFF IM+HL +HLA
Sbjct: 534 NVCVPLIRLSNFFQKMFSPVIRISEMEELEYEIAETICQLEKIFPLSFFNIMLHLPIHLA 593
Query: 742 HEAKVGGPVQYRWMYPIERY*LCIFKLIYFNVRIIYI*NYFFPRFLLTLKSFVRNKAYPE 801
HEA++ GPVQYR M+PIERY + LKS+VR K++PE
Sbjct: 594 HEARLAGPVQYRNMFPIERY-------------------------WMRLKSYVRAKSHPE 628
Query: 802 GSIAESFLANECLTFCSQYLSGVETRFSRPTRNDDEFDSTLDDGSFLHPMGRPLGRKR 859
GSI E+++ +E LTFCS+YL G TRF+ R+DD T++ S+L MGR L KR
Sbjct: 629 GSITENYIFDESLTFCSRYLHGCSTRFNHRGRHDDGTCQTINKKSYLSKMGRHLLGKR 686
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.336 0.147 0.497
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,938,466,561
Number of Sequences: 2540612
Number of extensions: 81860727
Number of successful extensions: 318205
Number of sequences better than 10.0: 552
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 314214
Number of HSP's gapped (non-prelim): 1111
length of query: 1145
length of database: 863,360,394
effective HSP length: 139
effective length of query: 1006
effective length of database: 510,215,326
effective search space: 513276617956
effective search space used: 513276617956
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 81 (35.8 bits)
Lotus: description of TM0230.6