BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0061.10
(276 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD81990.1| putative terbinafine resistance locus protein [O... 454 e-127
emb|CAB81019.1| putative protein [Arabidopsis thaliana] gi|57301... 441 e-122
gb|AAM13178.1| putative protein [Arabidopsis thaliana] gi|184175... 441 e-122
gb|AAD08953.1| expressed protein [Arabidopsis thaliana] gi|20197... 435 e-121
ref|NP_915653.1| P0677H08.6 [Oryza sativa (japonica cultivar-gro... 433 e-120
gb|AAM62630.1| unknown [Arabidopsis thaliana] 432 e-120
gb|AAV59309.1| unknown protein [Oryza sativa (japonica cultivar-... 422 e-117
emb|CAB03470.1| Hypothetical protein W02D9.2 [Caenorhabditis ele... 140 3e-32
emb|CAE64112.1| Hypothetical protein CBG08721 [Caenorhabditis br... 140 4e-32
ref|NP_001015932.1| hypothetical protein LOC548686 [Xenopus trop... 137 3e-31
ref|XP_420160.1| PREDICTED: similar to hypothetical protein MGC2... 135 2e-30
emb|CAG03754.1| unnamed protein product [Tetraodon nigroviridis] 134 2e-30
gb|EAL20430.1| hypothetical protein CNBE3510 [Cryptococcus neofo... 130 3e-29
ref|XP_343796.2| PREDICTED: similar to RIKEN cDNA A430107J06 [Ra... 130 4e-29
emb|CAI41478.1| novel protein [Homo sapiens] gi|57209863|emb|CAI... 129 9e-29
ref|NP_997516.1| hypothetical protein LOC77929 [Mus musculus] gi... 129 9e-29
ref|NP_001002096.1| hypothetical protein LOC415186 [Danio rerio]... 129 9e-29
ref|NP_608828.2| CG3652-PA [Drosophila melanogaster] gi|21429830... 128 2e-28
gb|EAL34053.1| GA17589-PA [Drosophila pseudoobscura] 127 3e-28
ref|XP_593379.1| PREDICTED: similar to novel protein [Bos taurus] 127 3e-28
>dbj|BAD81990.1| putative terbinafine resistance locus protein [Oryza sativa
(japonica cultivar-group)]
Length = 272
Score = 454 bits (1169), Expect = e-127
Identities = 231/277 (83%), Positives = 247/277 (88%), Gaps = 10/277 (3%)
Query: 2 SHGDTIPLHPSS-QSDIDEIENLIYASP-ATVLPARPPSPPRASIPVTTSSPFINSNLPA 59
+HGDTIPLHPSS QSD+DEIE+LIYA+P ATVLPARPPSPPRASIPV+TS PA
Sbjct: 4 NHGDTIPLHPSSAQSDMDEIESLIYAAPSATVLPARPPSPPRASIPVSTS--------PA 55
Query: 60 PLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVS 119
PLP + S P PI +P APP S I+S GFGP PNTLTEPVWDTVKRDL+RIVS
Sbjct: 56 PLPAPAKPSLPGASVPIIVPQAPPASVSVPIASDGFGPPPNTLTEPVWDTVKRDLARIVS 115
Query: 120 NLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFALLAAG 179
NLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFA+LAAG
Sbjct: 116 NLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAVLAAG 175
Query: 180 AVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVCVTLAWSSW 239
A+ILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAL+CMLKDNVILK++VV VTLAWSSW
Sbjct: 176 AIILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALVCMLKDNVILKIIVVTVTLAWSSW 235
Query: 240 AAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
AAYPFMS+AVNPRRKALALYPVFLMY+SVGFLIIAID
Sbjct: 236 AAYPFMSAAVNPRRKALALYPVFLMYISVGFLIIAID 272
>emb|CAB81019.1| putative protein [Arabidopsis thaliana] gi|5730136|emb|CAB52470.1|
putative protein [Arabidopsis thaliana]
gi|7486761|pir||T14086 hypothetical protein F9N11.110 -
Arabidopsis thaliana
Length = 355
Score = 441 bits (1134), Expect = e-122
Identities = 236/284 (83%), Positives = 246/284 (86%), Gaps = 12/284 (4%)
Query: 1 MSHGDTIPLHPSSQSDIDEIENLIYAS----PATVLPARPPSPPRASIPVTTSSPFINSN 56
MSH DTIPL+ SSQSDIDEIEN++ S P TVLPARPPSP R SIPV+ SSPF+ SN
Sbjct: 76 MSHNDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVS-SSPFVQSN 134
Query: 57 LPAPLPPKSSISQPQLPKPISLPPAPPPSTRPE----ISSSGFGPAPNTLTEPVWDTVKR 112
LP PLPP SS S Q P+ PP P PS E I SGFG PNTLTEPVWDTVKR
Sbjct: 135 LP-PLPPSSS-SSTQKVMPVPAPP-PLPSAGNEGNKSIGGSGFGSPPNTLTEPVWDTVKR 191
Query: 113 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVA 172
DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVA
Sbjct: 192 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVA 251
Query: 173 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVCV 232
FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICMLKDNVILK+VVV V
Sbjct: 252 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 311
Query: 233 TLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
TLAWSSWAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 312 TLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 355
>gb|AAM13178.1| putative protein [Arabidopsis thaliana]
gi|18417560|ref|NP_567843.1| integral membrane Yip1
family protein [Arabidopsis thaliana]
gi|15810091|gb|AAL06971.1| AT4g30260/F9N11_110
[Arabidopsis thaliana] gi|15010748|gb|AAK74033.1|
AT4g30260/F9N11_110 [Arabidopsis thaliana]
Length = 280
Score = 441 bits (1134), Expect = e-122
Identities = 236/284 (83%), Positives = 246/284 (86%), Gaps = 12/284 (4%)
Query: 1 MSHGDTIPLHPSSQSDIDEIENLIYAS----PATVLPARPPSPPRASIPVTTSSPFINSN 56
MSH DTIPL+ SSQSDIDEIEN++ S P TVLPARPPSP R SIPV+ SSPF+ SN
Sbjct: 1 MSHNDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVS-SSPFVQSN 59
Query: 57 LPAPLPPKSSISQPQLPKPISLPPAPPPSTRPE----ISSSGFGPAPNTLTEPVWDTVKR 112
LP PLPP SS S Q P+ PP P PS E I SGFG PNTLTEPVWDTVKR
Sbjct: 60 LP-PLPPSSS-SSTQKVMPVPAPP-PLPSAGNEGNKSIGGSGFGSPPNTLTEPVWDTVKR 116
Query: 113 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVA 172
DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVA
Sbjct: 117 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVA 176
Query: 173 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVCV 232
FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICMLKDNVILK+VVV V
Sbjct: 177 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 236
Query: 233 TLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
TLAWSSWAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 237 TLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 280
>gb|AAD08953.1| expressed protein [Arabidopsis thaliana] gi|20197033|gb|AAM14883.1|
expressed protein [Arabidopsis thaliana]
gi|7485786|pir||T01612 hypothetical protein At2g18840
[imported] - Arabidopsis thaliana
gi|18398861|ref|NP_565442.1| integral membrane Yip1
family protein [Arabidopsis thaliana]
Length = 281
Score = 435 bits (1118), Expect = e-121
Identities = 233/285 (81%), Positives = 243/285 (84%), Gaps = 13/285 (4%)
Query: 1 MSHGDTIPLHPSSQSDIDEIENLIYAS----PATVLPARPPSPPRASIPVTTSS---PFI 53
MS GDT+PLHPSSQSDIDEIENLI S P TVL ARPPSP R SIPV++SS PF+
Sbjct: 1 MSQGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFM 60
Query: 54 NSNLPAPLPPKSSISQ-PQLPKPISLPPAPPPSTRPEIS-SSGFGPAPNTLTEPVWDTVK 111
SNLP PL P SS + +P P PP P S +S FG PNTLTEPVWDTVK
Sbjct: 61 QSNLP-PLHPSSSAQKVTHVPVP---PPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVK 116
Query: 112 RDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAV 171
RDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAV
Sbjct: 117 RDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAV 176
Query: 172 AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVC 231
AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICMLKDNVILK+VVV
Sbjct: 177 AFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVS 236
Query: 232 VTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
VTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 237 VTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAIN 281
>ref|NP_915653.1| P0677H08.6 [Oryza sativa (japonica cultivar-group)]
Length = 664
Score = 433 bits (1113), Expect = e-120
Identities = 220/265 (83%), Positives = 235/265 (88%), Gaps = 10/265 (3%)
Query: 2 SHGDTIPLHPSS-QSDIDEIENLIYASP-ATVLPARPPSPPRASIPVTTSSPFINSNLPA 59
+HGDTIPLHPSS QSD+DEIE+LIYA+P ATVLPARPPSPPRASIPV+TS PA
Sbjct: 4 NHGDTIPLHPSSAQSDMDEIESLIYAAPSATVLPARPPSPPRASIPVSTS--------PA 55
Query: 60 PLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVS 119
PLP + S P PI +P APP S I+S GFGP PNTLTEPVWDTVKRDL+RIVS
Sbjct: 56 PLPAPAKPSLPGASVPIIVPQAPPASVSVPIASDGFGPPPNTLTEPVWDTVKRDLARIVS 115
Query: 120 NLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFALLAAG 179
NLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFA+LAAG
Sbjct: 116 NLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAVLAAG 175
Query: 180 AVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVCVTLAWSSW 239
A+ILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAL+CMLKDNVILK++VV VTLAWSSW
Sbjct: 176 AIILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALVCMLKDNVILKIIVVTVTLAWSSW 235
Query: 240 AAYPFMSSAVNPRRKALALYPVFLM 264
AAYPFMS+AVNPRRKALALYPVFLM
Sbjct: 236 AAYPFMSAAVNPRRKALALYPVFLM 260
>gb|AAM62630.1| unknown [Arabidopsis thaliana]
Length = 281
Score = 432 bits (1112), Expect = e-120
Identities = 229/284 (80%), Positives = 239/284 (83%), Gaps = 11/284 (3%)
Query: 1 MSHGDTIPLHPSSQSDIDEIENLIYAS----PATVLPARPPSPPRASIPVTTSS---PFI 53
MS GDT+PLHPSSQSDIDEIENLI S P TVL ARPPSP R SIPV++SS PF+
Sbjct: 1 MSQGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFM 60
Query: 54 NSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEIS-SSGFGPAPNTLTEPVWDTVKR 112
SNLP P S+ +P P PP P S +S FG PNTLTEPVWDTV R
Sbjct: 61 QSNLPXLHPSSSAQKVTHVPVP---PPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVXR 117
Query: 113 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVA 172
DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVA
Sbjct: 118 DLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVA 177
Query: 173 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVCV 232
FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICMLKDNVILK+VVV V
Sbjct: 178 FALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 237
Query: 233 TLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
TLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 238 TLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAIN 281
>gb|AAV59309.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|50931559|ref|XP_475307.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|46981288|gb|AAT07606.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 279
Score = 422 bits (1086), Expect = e-117
Identities = 223/287 (77%), Positives = 240/287 (82%), Gaps = 19/287 (6%)
Query: 1 MSHGDTIPLHPSS-QSDIDEIENLIYASP---ATVLPARPPSPPRASIPVTTSSPFINSN 56
MSHGDTIPLH SS QSD+DEIE+LI+A+P A VLPARPPSPPRASIPV++S P
Sbjct: 1 MSHGDTIPLHSSSAQSDMDEIESLIHAAPPSAAAVLPARPPSPPRASIPVSSSPPL---- 56
Query: 57 LPAPLPPKSSISQPQLPK-------PISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDT 109
LPP + S+PQLP S P P S I+ GFGP PNTLTEPV DT
Sbjct: 57 ----LPPPVAGSKPQLPPFSSSSSVASSSSPPLPSSVSVAIAGDGFGPPPNTLTEPVLDT 112
Query: 110 VKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVF 169
VKRDL+RIVSNLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVF
Sbjct: 113 VKRDLARIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVF 172
Query: 170 AVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVV 229
AVAFA+LAAGA+ILTLNVLLLGG I FFQSLSLLGYCLFPLDVGALICMLKDNV+LK++
Sbjct: 173 AVAFAVLAAGAIILTLNVLLLGGRINFFQSLSLLGYCLFPLDVGALICMLKDNVLLKIIA 232
Query: 230 VCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
V VTLAWSSWAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 233 VVVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
>emb|CAB03470.1| Hypothetical protein W02D9.2 [Caenorhabditis elegans]
gi|17509487|ref|NP_493177.1| putative protein, with at
least 4 transmembrane domains, of eukaryotic origin
(1N125) [Caenorhabditis elegans] gi|7508840|pir||T26112
hypothetical protein W02D9.2 - Caenorhabditis elegans
Length = 282
Score = 140 bits (354), Expect = 3e-32
Identities = 77/198 (38%), Positives = 116/198 (57%), Gaps = 14/198 (7%)
Query: 88 PEISSSGFGPAP--------NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALR 139
P+ SS+ GP +TL EPVWDTVKRD+ + + VV P+ D + LR
Sbjct: 86 PKSSSNRRGPMQEVDLDAEFDTLEEPVWDTVKRDVLTVGAKFTHVVLPHG---DKQQLLR 142
Query: 140 DWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQS 199
DWDLWGP F V L L+L + + + F F + G+VI+T N+ LLGG+I FFQS
Sbjct: 143 DWDLWGPLFICVGLALLLQHNGGTESAPQFTQVFTITFFGSVIVTANIKLLGGNISFFQS 202
Query: 200 LSLLGYCLFPLDVGALICMLKDNVI---LKVVVVCVTLAWSSWAAYPFMSSAVNPRRKAL 256
L ++GYCL P V A++C L + I L++++ + WS++A+ F++ +++ L
Sbjct: 203 LCVIGYCLLPPFVAAVLCSLFLHGIAFPLRLLITSIGFVWSTYASMGFLAGCQPDKKRLL 262
Query: 257 ALYPVFLMYVSVGFLIIA 274
+YPVFL Y V ++II+
Sbjct: 263 VIYPVFLFYFVVSWMIIS 280
>emb|CAE64112.1| Hypothetical protein CBG08721 [Caenorhabditis briggsae]
Length = 259
Score = 140 bits (353), Expect = 4e-32
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 14/198 (7%)
Query: 88 PEISSSGFGPAP--------NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALR 139
P+ SS+ GP +TL EPVWDTVKRD+ + + V+ P+ D + LR
Sbjct: 63 PKSSSARRGPMQEVDLDTEFDTLEEPVWDTVKRDVITVGAKFSHVILPHG---DKQQLLR 119
Query: 140 DWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQS 199
DWDLWGP F V L L+L + + + F F + G+VI+T N+ LLGG+I FFQS
Sbjct: 120 DWDLWGPLFICVGLALLLQHNGGTESAPQFTQVFTITFFGSVIVTANIKLLGGNISFFQS 179
Query: 200 LSLLGYCLFPLDVGALICMLKDNVI---LKVVVVCVTLAWSSWAAYPFMSSAVNPRRKAL 256
L ++GYCL P V A++C + + I L++++ V WS++A+ F++ +++ L
Sbjct: 180 LCVIGYCLLPPFVSAVLCSIFLHGIAFPLRLLITSVGFVWSTYASMGFLAGCQPDKKRLL 239
Query: 257 ALYPVFLMYVSVGFLIIA 274
+YPVFL Y V ++II+
Sbjct: 240 VIYPVFLFYFVVSWMIIS 257
>ref|NP_001015932.1| hypothetical protein LOC548686 [Xenopus tropicalis]
Length = 233
Score = 137 bits (346), Expect = 3e-31
Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 14/187 (7%)
Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSW 159
+TL EPV DT+ RDL + + V++P + LRDWDLWGP V L L+L
Sbjct: 48 STLDEPVKDTIMRDLKAVGNKFLHVMYP----KKSTTLLRDWDLWGPLVLCVSLALMLQG 103
Query: 160 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 216
+ K + FA F ++ GAV++TLN LLGG I FFQSL +LGYC+ PL V L+
Sbjct: 104 GNADSKDDGGPQFAEVFVIIWFGAVVITLNSKLLGGTISFFQSLCVLGYCILPLTVAMLV 163
Query: 217 CML-------KDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVG 269
C L + I+++VVV V AWS++A+ F++ + P R+ALA+YP+FL Y +
Sbjct: 164 CRLVLLLSHTTASFIVRLVVVTVMFAWSTFASTAFLADSQPPNRRALAVYPIFLFYFVIS 223
Query: 270 FLIIAID 276
++++ +
Sbjct: 224 WMVLTFN 230
>ref|XP_420160.1| PREDICTED: similar to hypothetical protein MGC21416 [Gallus gallus]
Length = 247
Score = 135 bits (339), Expect = 2e-30
Identities = 74/184 (40%), Positives = 107/184 (57%), Gaps = 14/184 (7%)
Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSW 159
+TL EPV DT+ RDL + V++P + LRDWDLWGP V L L+L
Sbjct: 63 STLDEPVRDTILRDLKAVGKKFVHVMYP----KKSSALLRDWDLWGPLVLCVSLALMLQG 118
Query: 160 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 216
++ K + FA F ++ GAV++TLN LLGG I FFQSL +LGYC+ PL V L+
Sbjct: 119 GSADSKEDGGPQFAEVFVIIWFGAVVITLNSKLLGGTISFFQSLCVLGYCVLPLTVAMLV 178
Query: 217 CML-------KDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVG 269
C L + I++++VV AWS+ A+ F++ + P RKAL +YP+FL Y +
Sbjct: 179 CRLVLLAGSGTVSFIIRLIVVIAMFAWSTLASTAFLADSQPPHRKALVVYPIFLFYFVIS 238
Query: 270 FLII 273
++I+
Sbjct: 239 WMIL 242
>emb|CAG03754.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 134 bits (338), Expect = 2e-30
Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 14/194 (7%)
Query: 90 ISSSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFF 149
I SSG +TL EPV +T+ RDL + V++P + LRDWDLWGP
Sbjct: 35 IGSSGADDEFSTLDEPVKETILRDLRAVGQKFVHVLYP----KRSSALLRDWDLWGPLLL 90
Query: 150 IVFLGLILSWSASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYC 206
V L L+L A+ + + FA F ++ G++I+TLN LLGG+I FFQSL +LGYC
Sbjct: 91 CVTLALLLQGGAADRDDQGGPQFAEVFVIIWFGSIIITLNSKLLGGNISFFQSLCVLGYC 150
Query: 207 LFPLDVGALICML-------KDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALY 259
+ PL V ++C + + +++ VV + WS++A+ F++ + P RKAL +Y
Sbjct: 151 ILPLTVAMVVCRIVLIGGSGTVSFAVRLAVVTASFGWSTFASTAFLADSQPPNRKALVVY 210
Query: 260 PVFLMYVSVGFLII 273
PVFL Y +G++I+
Sbjct: 211 PVFLFYFVIGWIIL 224
>gb|EAL20430.1| hypothetical protein CNBE3510 [Cryptococcus neoformans var.
neoformans B-3501A] gi|57227150|gb|AAW43609.1|
vesicle-mediated transport-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
gi|58267520|ref|XP_570916.1| vesicle-mediated
transport-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 268
Score = 130 bits (328), Expect = 3e-29
Identities = 78/238 (32%), Positives = 125/238 (51%), Gaps = 24/238 (10%)
Query: 58 PAPLPPKSSISQPQLPKPISLPPAPP----------PSTRPEISSSGFG----------P 97
P P P SS Q P ++ P P PS +P ++S G
Sbjct: 31 PNPTPSGSSSQQQPQPSHVAGPSNPSGVSGKIGQDGPSNKPRAATSTTGWGGVRVETRYT 90
Query: 98 APNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLIL 157
+TL EPV T+ RDL+ I + L L+++P + + LRDWDLWGP + L ++L
Sbjct: 91 GESTLDEPVSKTIMRDLNSIYAKLILILYPP--KGGHSQLLRDWDLWGPLVICLALAIVL 148
Query: 158 SWSASVKKS-EVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 216
S A +S +VF++ +L+ G+V++T+N LLGG + FFQSL +LGY + P+ + +++
Sbjct: 149 SIDAPQDQSMQVFSLVISLITVGSVVVTVNSKLLGGKVSFFQSLCVLGYAIAPILIASIV 208
Query: 217 CMLKDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPR-RKALALYPVFLMYVSVGFLII 273
L N+ +++ V WS WA+ F + P R LA+YP+ L + + ++II
Sbjct: 209 SFLVHNIFVRIPVTLACWGWSVWASMNFFNGTQLPESRTFLAVYPMCLFFFVLAWMII 266
>ref|XP_343796.2| PREDICTED: similar to RIKEN cDNA A430107J06 [Rattus norvegicus]
gi|67678472|gb|AAH97987.1| Unknown (protein for
MGC:116126) [Rattus norvegicus]
Length = 236
Score = 130 bits (327), Expect = 4e-29
Identities = 77/185 (41%), Positives = 104/185 (55%), Gaps = 15/185 (8%)
Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSW 159
+TL E + T+ RDL + V++P LRDWDLWGP V L L+L
Sbjct: 52 STLNESIRRTIMRDLKAVGRKFMHVLYPRK----SNTLLRDWDLWGPLILCVSLALMLQK 107
Query: 160 SASVKK----SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAL 215
S+ K S FA F ++ GAV +TLN LLGG+I FFQSL +LGYC+ PL++ L
Sbjct: 108 SSVEGKRDGGSPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQSLCVLGYCVLPLNIAML 167
Query: 216 ICML-------KDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSV 268
IC L N ++++ VV V AWS A+ F++ P RKALA+YPVFL Y V
Sbjct: 168 ICRLLLLAGQGPINFMIRLFVVLVMFAWSVIASTAFLADCQPPNRKALAVYPVFLFYFVV 227
Query: 269 GFLII 273
++I+
Sbjct: 228 SWMIL 232
>emb|CAI41478.1| novel protein [Homo sapiens] gi|57209863|emb|CAI41511.1| novel
protein [Homo sapiens] gi|55663298|ref|XP_521102.1|
PREDICTED: similar to hypothetical protein MGC21416 [Pan
troglodytes]
Length = 236
Score = 129 bits (324), Expect = 9e-29
Identities = 75/184 (40%), Positives = 107/184 (57%), Gaps = 14/184 (7%)
Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSW 159
+TL E V +T+ RDL + V++P LRDWDLWGP V L L+L
Sbjct: 52 STLNESVRNTIMRDLKAVGKKFMHVLYPRK----SNTLLRDWDLWGPLILCVTLALMLQR 107
Query: 160 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 216
++ + + FA F ++ GAV +TLN LLGG+I FFQSL +LGYC+ PL V LI
Sbjct: 108 DSADSEKDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLI 167
Query: 217 C---MLKD----NVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVG 269
C +L D N ++++ VV V AWS A+ F++ + P R+ALA+YPVFL Y +
Sbjct: 168 CRLVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVIS 227
Query: 270 FLII 273
++I+
Sbjct: 228 WMIL 231
>ref|NP_997516.1| hypothetical protein LOC77929 [Mus musculus]
gi|28913532|gb|AAH48712.1| A430107J06Rik protein [Mus
musculus] gi|26337383|dbj|BAC32377.1| unnamed protein
product [Mus musculus]
Length = 236
Score = 129 bits (324), Expect = 9e-29
Identities = 74/185 (40%), Positives = 106/185 (57%), Gaps = 15/185 (8%)
Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSW 159
+TL E + T+ RDL + V++P LRDWDLWGP V L L+L
Sbjct: 52 STLNESIRRTIMRDLKAVGRKFMHVLYPRK----SNALLRDWDLWGPLILCVTLALMLQK 107
Query: 160 SASVKKSE----VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAL 215
S+ K++ FA F ++ GAV +TLN LLGG+I FFQSL +LGYC+ PL++ L
Sbjct: 108 SSIDGKNDGGGPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLNIAML 167
Query: 216 ICML-------KDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSV 268
IC L N ++++ VV + AWS A+ F++ + P RKALA+YPVFL Y +
Sbjct: 168 ICRLLLLAGQGPINFMIRLFVVLLMFAWSVVASTAFLADSQPPNRKALAVYPVFLFYFVI 227
Query: 269 GFLII 273
++I+
Sbjct: 228 SWMIL 232
>ref|NP_001002096.1| hypothetical protein LOC415186 [Danio rerio]
gi|47940057|gb|AAH71525.1| Zgc:86904 [Danio rerio]
Length = 240
Score = 129 bits (324), Expect = 9e-29
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 14/184 (7%)
Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSW 159
+TL EPV DT+ RDL + V++P + LRDWDLWGP V L L+L
Sbjct: 55 STLDEPVKDTILRDLRAVGQKFVHVMYP----KKSSALLRDWDLWGPLLLCVTLALMLQG 110
Query: 160 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 216
++ + + FA F ++ G+VI+TLN LLGG I FFQSL +LGYC+ PL V ++
Sbjct: 111 GSADSEEDGRPQFAEVFVIIWFGSVIITLNSKLLGGTISFFQSLCVLGYCILPLTVAMIV 170
Query: 217 CML-------KDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVG 269
C + + ++++VV + +WS++A+ F++ + RKAL +YPVFL Y +G
Sbjct: 171 CRIVLLGGSGVVSFAVRLIVVTASFSWSTFASTAFLADSQPTNRKALVVYPVFLFYFVIG 230
Query: 270 FLII 273
++I+
Sbjct: 231 WMIL 234
>ref|NP_608828.2| CG3652-PA [Drosophila melanogaster] gi|21429830|gb|AAM50593.1|
GH04132p [Drosophila melanogaster]
gi|22945226|gb|AAF51019.2| CG3652-PA [Drosophila
melanogaster]
Length = 224
Score = 128 bits (322), Expect = 2e-28
Identities = 73/218 (33%), Positives = 118/218 (53%), Gaps = 19/218 (8%)
Query: 68 SQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFP 127
+ P L +S+P T S+SG P NTL EP+ +TV RD+ + V++P
Sbjct: 13 TSPSLEGDMSIPGK---RTTTATSASGV-PEYNTLDEPIRETVLRDIRAVGIKFYHVLYP 68
Query: 128 NPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSE----VFAVAFALLAAGAVIL 183
++ LRDWDLWGP F+ IL S++ FA F ++ GA ++
Sbjct: 69 ----KEKSSLLRDWDLWGPLVLCTFMATILQGSSTADSMSDNGPEFAQVFVIVWIGAAVV 124
Query: 184 TLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICML-------KDNVILKVVVVCVTLAW 236
TLN LLGG+I FFQS+ +LGYCL P+ + ++C + + L+ V + AW
Sbjct: 125 TLNSKLLGGNISFFQSVCVLGYCLTPVAISLIVCRVILLATQTRLLFFLRFVTTTIGFAW 184
Query: 237 SSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIA 274
+++A++ F+ + P RK LA+YP+FL + + +L+++
Sbjct: 185 ATYASFVFLGQSQPPHRKPLAVYPIFLFFFIISWLVLS 222
>gb|EAL34053.1| GA17589-PA [Drosophila pseudoobscura]
Length = 226
Score = 127 bits (320), Expect = 3e-28
Identities = 73/216 (33%), Positives = 116/216 (52%), Gaps = 19/216 (8%)
Query: 70 PQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNP 129
P L +S+P +T +S P NTL EP+ +TV RD+ + V++P
Sbjct: 17 PSLEGDMSIPGKRTTTT----TSQNGVPDYNTLDEPIKETVLRDIRAVGVKFYHVLYP-- 70
Query: 130 YREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSE----VFAVAFALLAAGAVILTL 185
++ LRDWDLWGP F+ IL S+S FA F ++ GA I+TL
Sbjct: 71 --KEKSSLLRDWDLWGPLVLCTFMATILQGSSSADSMSDNGPEFAQVFVIVWIGAAIVTL 128
Query: 186 NVLLLGGHIIFFQSLSLLGYCLFPLDVGALICML-------KDNVILKVVVVCVTLAWSS 238
N LLGG+I FFQS+ +LGYCL P+ + ++C + + L+ V + AW++
Sbjct: 129 NSKLLGGNISFFQSVCVLGYCLTPVAISLIVCRIILLSTQTRLLFFLRFVTTTMGFAWAT 188
Query: 239 WAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIA 274
+A++ F+ + P RK LA+YP+FL + + +L+++
Sbjct: 189 YASFIFLGQSQPPHRKPLAVYPIFLFFFIISWLVLS 224
>ref|XP_593379.1| PREDICTED: similar to novel protein [Bos taurus]
Length = 239
Score = 127 bits (319), Expect = 3e-28
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 14/184 (7%)
Query: 100 NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSW 159
+TL E V +T+ RDL + V++P LRDWDLWGP V L L+L
Sbjct: 55 STLNESVQNTIMRDLKAVGKKFMHVLYPRK----SNTLLRDWDLWGPLILCVTLALMLQR 110
Query: 160 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALI 216
+ + + FA F ++ GAV +TLN LLGG+I FFQSL +LGYC+ PL + L+
Sbjct: 111 GSVDSEKDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTMAMLV 170
Query: 217 CML-------KDNVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVG 269
C L N ++++ VV + AWS A+ F++ + P RKALA+YPVFL Y +
Sbjct: 171 CRLVLLAEPGPVNFMVRLFVVIIMFAWSIVASTAFLADSQPPNRKALAVYPVFLFYFVIS 230
Query: 270 FLII 273
++I+
Sbjct: 231 WMIL 234
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,217,686
Number of Sequences: 2540612
Number of extensions: 24884238
Number of successful extensions: 267351
Number of sequences better than 10.0: 6117
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 5485
Number of HSP's that attempted gapping in prelim test: 200198
Number of HSP's gapped (non-prelim): 34225
length of query: 276
length of database: 863,360,394
effective HSP length: 126
effective length of query: 150
effective length of database: 543,243,282
effective search space: 81486492300
effective search space used: 81486492300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0061.10