BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.12
(1332 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60170 putative protein 1993 0.0
At1g32590 hypothetical protein, 5' partial 1299 0.0
At1g48710 hypothetical protein 1172 0.0
At3g61330 copia-type polyprotein 1166 0.0
At1g58140 hypothetical protein 1153 0.0
At3g59720 copia-type reverse transcriptase-like protein 1044 0.0
At2g15650 putative retroelement pol polyprotein 936 0.0
At3g25450 hypothetical protein 912 0.0
At2g05390 putative retroelement pol polyprotein 874 0.0
At2g05960 putative retroelement pol polyprotein 737 0.0
At1g37110 654 0.0
At2g13930 putative retroelement pol polyprotein 649 0.0
At2g07550 putative retroelement pol polyprotein 647 0.0
At5g35820 copia-like retrotransposable element 642 0.0
At3g45520 copia-like polyprotein 631 0.0
At2g21460 putative retroelement pol polyprotein 607 e-173
At1g31210 putative reverse transcriptase 606 e-173
At4g03810 putative retrotransposon protein 554 e-157
At2g20460 putative retroelement pol polyprotein 547 e-155
At1g70010 hypothetical protein 528 e-149
>At3g60170 putative protein
Length = 1339
Score = 1993 bits (5162), Expect = 0.0
Identities = 969/1339 (72%), Positives = 1130/1339 (84%), Gaps = 8/1339 (0%)
Query: 1 MSDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKA 60
MS SEKF QPAIP+FDG+YD+WSMTMENFLRS+E+W LV+EGIP + GTTP SE Q A
Sbjct: 1 MSSSEKFVQPAIPRFDGYYDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSA 60
Query: 61 VEEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRR 120
VEEAKLKDLKVKN+LFQAI REILETILDK TSK IW SMK+KY GS+KVKR QLQ +R+
Sbjct: 61 VEEAKLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRK 120
Query: 121 EFDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEE 180
EF+LLAMKEGEK+D+FLGRTL VVNKMK+NGE ME ST+VSKILRSLT KFNYVVCSIEE
Sbjct: 121 EFELLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEE 180
Query: 181 SNDLSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRGAPRG--GRGRGR 238
SNDLS LSIDELHGSLLVHEQR+ GH +EE LKV E+R S+GRGRG RG GRGRGR
Sbjct: 181 SNDLSTLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRGSRGRGRGR 240
Query: 239 GRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMAYVEPHQTKKQEVW 298
GR N+ ++ECYKCH LGHFQYECP+WEK NYAELEEEEELLLMAYVE +Q + EVW
Sbjct: 241 GRSGTNRAIVECYKCHNLGHFQYECPEWEKNANYAELEEEEELLLMAYVEQNQANRDEVW 300
Query: 299 YLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGITQVISDVYY 358
+LDSGCSNHM G+KEWF +LEE F+RTVKLGNDTRM+VV KGS+++++NG+TQVI +VYY
Sbjct: 301 FLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVYY 360
Query: 359 IPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRS 418
+PEL+NNLLS+GQLQE+GLAILI+DGTCKV+HP +G IM+TNMSGN MFFLLAS K S
Sbjct: 361 VPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNS 420
Query: 419 VCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHR 478
+CLQ E V KE H+ HCRFGHLN +GL+ L+HKKMV+GLP L++ ++IC CLTGKQHR
Sbjct: 421 LCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHR 480
Query: 479 EPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAF 538
E + K++ W++S QLQLVHSDICGPI P +S KRYILSFIDD TRKTWVYFLHEKSEAF
Sbjct: 481 ESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAF 540
Query: 539 VKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAE 598
FK +KA VEKEIGA +TCLRTDR EFTSNEF EFCRS GI+RQLT +TP QNGVAE
Sbjct: 541 ATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAE 600
Query: 599 RKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVH 658
RKNRTIMN VRSML+E+QVPK+FWSEA +W VHIQNR P AVE TPEEAWSG KPVV
Sbjct: 601 RKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVE 660
Query: 659 YFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEE 718
YFR+F C+ +VH+PDQ+RSKLDDKSKKCVFLGVS+ESKAWRLY PV KKI++SKDVVF+E
Sbjct: 661 YFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDE 720
Query: 719 EESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISN 778
++SWDW + + E K LECG+ED + + S N S N++ S P S
Sbjct: 721 DKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSP 780
Query: 779 TPEELVEGRVVRERRVPSWFADYETREG--LEENLNAM--MMVTENDPVSFGEAVKNKKW 834
P V +V RERR P W ADYET EG +EENL+ M MM+TE DP+ F +AVK+K W
Sbjct: 781 APSP-VAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIW 839
Query: 835 RDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQR 894
R+AM EIESI +N +WELT LPKG PIGVKWV+KTKLNEDG+V+K+KARLVAKGYAQ
Sbjct: 840 REAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQC 899
Query: 895 HEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIR 954
+ +DYTEVFAPVARLDT+R IL +++QF+WE+FQLDVKSAFLHGELKEEV+V+QP+GFIR
Sbjct: 900 YGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIR 959
Query: 955 KGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIVSL 1014
+GEE+KVY+L+KALYGLKQA RAWYSRIEAYF++E+FERCPSEH LFTK++ G ILIVSL
Sbjct: 960 EGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSL 1019
Query: 1015 YVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDV 1074
YVDDLIFTG+D+ MCDEFK SMMLEF+MSDLGKMK+FLG+EVKQ GIFIC RRYAR+V
Sbjct: 1020 YVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREV 1079
Query: 1075 LARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLI 1134
LARF M +SNAVKNP VPGTKL+KDE G +VDET+FKQ+VGSLMYLTVTRPDLMYGV LI
Sbjct: 1080 LARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLI 1139
Query: 1135 SRFMSSPTMSHWLAAKRILRYLKGTTDLGIFY-KKGGSNMKLMAFPDSDYAGDLDDRRST 1193
SRFMS+P MSHWLAAKRILRYLKGT +LGIFY ++ ++KLMAF DSDYAGDL+DRRST
Sbjct: 1140 SRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRST 1199
Query: 1194 SRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTSTE 1253
S FVF++ SG + W+SKKQ VVALSTTEAEYIAAA CACQCVWL +VLEK+G EEK++T
Sbjct: 1200 SGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATV 1259
Query: 1254 IMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIK 1313
I CDNS TIQLSK+PV HGKSKHI+VRFH+LRDLVN V+KL YC ++DQ+ADI TKP+K
Sbjct: 1260 INCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLK 1319
Query: 1314 LEQFEKLRGMLGVTEVSKV 1332
LEQFEKLR +LG+ +S+V
Sbjct: 1320 LEQFEKLRALLGMVNMSEV 1338
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 1299 bits (3362), Expect = 0.0
Identities = 672/1293 (51%), Positives = 882/1293 (67%), Gaps = 71/1293 (5%)
Query: 57 QMKAVEEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQ 116
Q + E +KD KVKNYLF +I + IL+TIL KETSK++W SMK+KY G+ +V+ QLQ
Sbjct: 14 QRTELAEKTVKDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQ 73
Query: 117 VMRREFDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVC 176
+RR F++L MK GE + + R + + N M++ GE M S VV KILR+L KF YVVC
Sbjct: 74 RLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVC 133
Query: 177 SIEESNDLSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRG-APRGGRG 235
+IEESN++ L++D L SL+VHEQ + H EE VLK + R GRGRG +P GRG
Sbjct: 134 AIEESNNIKELTVDGLQSSLMVHEQNLSRHDVEERVLKAETQWRPDGGRGRGGSPSRGRG 193
Query: 236 RG----RGRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMAYVEPHQ 291
RG RGR +N++ +EC+KCH++GH++ ECP WEK+ NY E+EE+ LLLMA+VE
Sbjct: 194 RGGYQGRGRGYVNRDTVECFKCHKMGHYKAECPSWEKEANYVEMEED--LLLMAHVEQIG 251
Query: 292 TKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGITQ 351
+++++W+LDSGCSNHM G +EWFL+L+ F + V+LG+D RMAV KG +R++++G Q
Sbjct: 252 DEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ 311
Query: 352 VISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPM-RGVIMQTNMSGNIMFFLL 410
VISDVY++P LKNNL S+GQLQ+KGL +I+ C+V+H + ++M + M+ N MF +
Sbjct: 312 VISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVF 371
Query: 411 ASMAPKRSV----CLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLE--SP 464
A++ + CLQ V K +M H RFGHLNH+GLR+L+ K+MV GLP +
Sbjct: 372 AAVKKSKETEETRCLQ---VIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEE 428
Query: 465 EKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTR 524
E +C CL GKQ RE +PK S W++++ LQLVH+DICGPI P+ S KRYIL+FIDD +R
Sbjct: 429 EAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSR 488
Query: 525 KTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQ 584
K W Y L EKSE F FKE+KA VE+E G + CLR+DR E+ S EFDE+C+ GI RQ
Sbjct: 489 KCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQ 548
Query: 585 LTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENK 644
LT YTP QNGVAERKNR++MN+ R ML E VP+ FW EAV++ V+I NR P A+ +
Sbjct: 549 LTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDI 608
Query: 645 TPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPV 704
TPEE WS KP V + RIF +A+ VP Q+R KLD+KS KCV GVS ESKA+RLY P
Sbjct: 609 TPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPA 668
Query: 705 SKKIIVSKDVVFEEEESWDWG--RIEEEIKLDILE---CGEEDQNEEENGRTDLNNLSSN 759
+ KI++S+DV F+EE W+W +EEE+ D + GEE NG+ D
Sbjct: 669 TGKILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEE 728
Query: 760 SSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGL------EENLNA 813
+ + ++ ++LP V VR+R+ P W DY EE+
Sbjct: 729 EETVAETVHQNLP----------AVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVL 778
Query: 814 MMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKL 873
+ + +DPV F EA + + WR AM AEI SIE N +WEL LP+ K IG+KW+FKTK
Sbjct: 779 ALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKF 838
Query: 874 NEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKS 933
NE G+V+KFKARLVAKGY QR+ VD+ EVFAPVA+ DTIR+IL +AA+ W VFQLDVKS
Sbjct: 839 NEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKS 898
Query: 934 AFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFER 993
AFLHG+LKE+VFV+QPKGF + E KVY+LKKALYGLKQA RAWYSRIE +F +E FE+
Sbjct: 899 AFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEK 958
Query: 994 CPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLG 1053
C EH LF K + L+VS+YVDDLI+TG+ M + FK+SMM EF M+DLGKMKYFLG
Sbjct: 959 CYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLG 1018
Query: 1054 VEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQV 1113
VEV Q GIFI R+YA +++ ++ M N+VKNP VPG KL+K
Sbjct: 1019 VEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTK--------------- 1063
Query: 1114 VGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNM 1173
+SR+M SP H LA KRILRY++GT DLGI Y++GG+
Sbjct: 1064 -----------------AGAVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGAT- 1105
Query: 1174 KLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQ 1233
+L+ F DSDYAGD+DDR+STS +VFMLG G ++W+SKKQ +V LSTTEAE+++A+ ACQ
Sbjct: 1106 ELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQ 1165
Query: 1234 CVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVI 1293
VWL VLE+IG ++ T + CDNS TI+LSKNPV HG+SKHI VR+HFLR+LV +G I
Sbjct: 1166 AVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTI 1225
Query: 1294 KLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
+L YC + DQ+ADIMTK +K E FE+LRG +GV
Sbjct: 1226 RLDYCTTTDQVADIMTKAVKREVFEELRGRMGV 1258
>At1g48710 hypothetical protein
Length = 1352
Score = 1172 bits (3031), Expect = 0.0
Identities = 622/1369 (45%), Positives = 869/1369 (63%), Gaps = 66/1369 (4%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQEE-EHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+E+K NY E + +EE++LLMA + + ++ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDQESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL GKQ + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
DR EFTS EF ++C GI RQLT +P QNGVAERKNRTI+ + RSML K++PK
Sbjct: 596 DRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG K V + R+F +AH HVPD++RSKLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDY--NFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE R R R + Y
Sbjct: 774 DEPEPTR------------EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL---Y 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
E E +ENL + E +P+ F EA++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 819 EVTEN-QENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 877
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY QR +DY EVFAPVARL+T+R+I+ +AAQ
Sbjct: 878 TIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQ 937
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKKALYGLKQA RAW +R
Sbjct: 938 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTR 997
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ M +EFK M EF+
Sbjct: 998 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1057
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F M DSN V P G KLSK E
Sbjct: 1058 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEE 1117
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
G VD T FK +VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1118 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1177
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y S+ KL+ + DSD+ GD+DDR+STS FVF +G +W SKKQ +V LST E
Sbjct: 1178 FGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCE 1236
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA C C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1237 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1296
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+ADI TKP+K E F K+R +LGV + S
Sbjct: 1297 HYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1345
>At3g61330 copia-type polyprotein
Length = 1352
Score = 1166 bits (3016), Expect = 0.0
Identities = 617/1369 (45%), Positives = 868/1369 (63%), Gaps = 66/1369 (4%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+E+K +Y E + +EE++LLMA + + K+ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDQESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL GKQ + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
DR EFTS EF ++C GI RQLT +P QNGV ERKNRTI+ + RSML K++PK
Sbjct: 596 DRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG KP V + R+F +AH HVPD++RSKLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDY--NFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE R R R + Y
Sbjct: 774 DEPEPTR------------EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL---Y 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
E E +ENL + E +P+ F +A++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 819 EVTEN-QENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 877
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY+QR +DY EVFAPVARL+T+R+I+ +AAQ
Sbjct: 878 AIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQ 937
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKK LYGLKQA RAW +R
Sbjct: 938 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTR 997
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ + +EFK M EF+
Sbjct: 998 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFE 1057
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F + DSN V P G KLSK E
Sbjct: 1058 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEE 1117
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
G VD T FK +VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1118 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1177
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y S+ KL+ + DSD+ GD+DDR+STS FVF +G +W SKKQ +V LST E
Sbjct: 1178 FGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCE 1236
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA C C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1237 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1296
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+AD TKP+K E F K+R +LGV + S
Sbjct: 1297 HYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSS 1345
>At1g58140 hypothetical protein
Length = 1320
Score = 1153 bits (2982), Expect = 0.0
Identities = 614/1369 (44%), Positives = 858/1369 (61%), Gaps = 98/1369 (7%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+E+K NY E + +EE++LLMA + + ++ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDQESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL GKQ + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
DR EFTS EF ++C GI RQLT +P QNGVAERKNRTI+ + RSML K++PK
Sbjct: 596 DRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG KP V + R+F +AH HVPD++RSKLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEED--YNFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE E
Sbjct: 774 DKPE------------PTREEPPSEEPTTPPTSPTSSQIEEKCE---------------- 805
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
P+ F EA++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 806 --------------------PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 845
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY+QR +DY EVFAPVARL+T+R+I+ +AAQ
Sbjct: 846 AIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQ 905
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKKALYGLKQA RAW +R
Sbjct: 906 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTR 965
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ M +EFK M EF+
Sbjct: 966 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1025
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F M DSN V P G KLSK E
Sbjct: 1026 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEE 1085
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
G VD T FK +VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1086 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1145
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y S+ KL+ + DSD+ GD+DDR+STS FVF +G +W SKKQ +V LST E
Sbjct: 1146 FGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCE 1204
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA C C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1205 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1264
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+ADI TKP+K E F K+R +LGV + S
Sbjct: 1265 HYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1313
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 1044 bits (2700), Expect = 0.0
Identities = 573/1369 (41%), Positives = 814/1369 (58%), Gaps = 146/1369 (10%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+++K NY E + +EE++LLMA + + ++ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDKESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL G Q + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
D EFTS EF ++C GI RQLT +P QNGVAERKNRTI+ + RSML K++PK
Sbjct: 596 DSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG KP V + R+F +AH HVPD++R+KLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDY--NFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE R R R + Y
Sbjct: 774 DKPEPTR------------EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL---Y 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
E E +ENL + E +P+ F EA++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 819 EVTEN-QENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 877
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY+QR +DY E+FAPVARL+T+R+I+ +AAQ
Sbjct: 878 AIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQ 937
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKK LYGLKQA RAW +R
Sbjct: 938 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTR 997
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ M +EFK M EF+
Sbjct: 998 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1057
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F M DSN
Sbjct: 1058 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSN----------------- 1100
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
+VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1101 ---------PSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1151
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y SDY
Sbjct: 1152 FGLHYS-----------TTSDY-------------------------------------- 1162
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
L C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1163 ------KLVVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1216
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+ADI TKP+K E F K+R +LGV + S
Sbjct: 1217 HYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1265
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 936 bits (2419), Expect = 0.0
Identities = 508/1358 (37%), Positives = 795/1358 (58%), Gaps = 67/1358 (4%)
Query: 12 IPKFDGH-YDYWSMTMENFLRSKEMWSLVDEGIPV--LETGTTPASEEQMKAVEEAKLKD 68
IP FDG YD+WS+ M R++++WS+V+EG+PV ++ TP + EEA D
Sbjct: 9 IPIFDGEKYDFWSIKMATIFRTRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTND 68
Query: 69 LKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMK 128
L A+ +I I +SKE W+ +K +Y GS +V+ +LQ +RRE++ L M
Sbjct: 69 TMALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMY 128
Query: 129 EGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSILS 188
+ + + +F + +++ ++ +GE ++ ++ KIL SL +KF+ +V +E++ DL L+
Sbjct: 129 DNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALT 188
Query: 189 IDELHGSLLVHEQRMQGHQE--EEHVLKVAQEDRSSRGR----GRGAPRGGRGRGRGRQS 242
+ EL G L E R+ +E +E V + R S + + + G + S
Sbjct: 189 MSELLGILKAQEARVTAREESTKEGAFYVRSKGRESGFKQDNTNNRVNQDKKWCGFHKSS 248
Query: 243 LNKEV------------------IECYKCHRLGHFQYECPDWEKKVNYAELEEEE----E 280
+ E I+CYKC ++GH+ EC K+ + LEEE+
Sbjct: 249 KHTEEECREKPKNDDHGKNKRSNIKCYKCGKIGHYANECRSKNKERAHVTLEEEDVNEDH 308
Query: 281 LLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKG 340
+L A E T +++VW +DSGC+NHM + +F ++ + +++ N + KG
Sbjct: 309 MLFSASEEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKG 368
Query: 341 SIRMQLNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTN 400
I + ++I +V+ +P L+ NLLS+ Q+ G + QD C + IM
Sbjct: 369 DITVMTRHGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEIMNIE 428
Query: 401 MSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPS 460
M+ L+S+ +A + + H R GH+++K L+ + K++V GLP
Sbjct: 429 MTDKSFKIKLSSVEE------EAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPR 482
Query: 461 LESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFID 520
+ ++ C C GKQ R+ PK S + ++L++VH+D+CGP++ RY + F+D
Sbjct: 483 FKVTKETCKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLD 542
Query: 521 DHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQG 580
D+T WVYFL +KSE F FK++KA VEK+ I LR V FC +G
Sbjct: 543 DYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRPMEV----------FCEDEG 592
Query: 581 INRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVA 640
INRQ+T Y+P QNG AERKNR+++ + RSML E+ +P W+EAV ++QNR P A
Sbjct: 593 INRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKA 652
Query: 641 VENK-TPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWR 699
+E+ TP E W G KP V + RIF + +VH+PDQ+R KLD K+K + +G S+++K +R
Sbjct: 653 IEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYR 712
Query: 700 LYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGE--EDQNEEENGRTDL---- 753
+++ +K+ VS+DVVF+E++ WDW + EE K ++ + E ++++E DL
Sbjct: 713 VFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQID 772
Query: 754 ---NNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGLEEN 810
NN +SS S S +P++ + + E+ P D E +G+E
Sbjct: 773 DHANNGEGETSSHVLSQVNDQEERETSESPKKYKSMKEILEK-APRMEND-EAAQGIEAC 830
Query: 811 LNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFK 870
L V +P ++ EA +K+W +AM+ EI+ IE+N++W+L P+ I VKW++K
Sbjct: 831 L-----VANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYK 885
Query: 871 TKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLD 930
K + G+ K KARLVA+G++Q + +DY E FAPV+R DTIR +L AAQ W ++Q+D
Sbjct: 886 IKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMD 945
Query: 931 VKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVRED 990
VKSAFL+GEL+EEV+V QP GF+ +G+E+KV RL KALYGLKQA RAWY RI++YF++
Sbjct: 946 VKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNG 1005
Query: 991 FERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKY 1050
F R ++ L++K KG +LIVSLYVDDLI TGN+ + + FK +M EF+M+DLG + Y
Sbjct: 1006 FARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNY 1065
Query: 1051 FLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVR--VDET 1108
FLG+EV Q GIF+ +YA ++ +F M++S +V P P K EG + D T
Sbjct: 1066 FLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPT 1125
Query: 1109 LFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKK 1168
++++VG L+YL +RPD+MY S +SR+MSSP++ H+ AKR+LRY+KGT++ G+ +
Sbjct: 1126 KYRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLF-T 1184
Query: 1169 GGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAA 1228
+L+ + DSD+ G L+D++ST+ +VF LG + W S KQ VA ST EAEYIA
Sbjct: 1185 SKETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVC 1244
Query: 1229 LCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLV 1288
Q +WL R+ E G++ K I+CDN I + +NPV H ++KHI++++HF+R+
Sbjct: 1245 AATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAE 1304
Query: 1289 NDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
+ G+I+L YC +DQ+AD++TK + + +FE LR LGV
Sbjct: 1305 HKGLIQLEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
>At3g25450 hypothetical protein
Length = 1343
Score = 912 bits (2356), Expect = 0.0
Identities = 512/1339 (38%), Positives = 770/1339 (57%), Gaps = 64/1339 (4%)
Query: 18 HYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLKDLKVKNYLFQ 77
+Y W+M ME LR ++W ++ G A EE K+ + LFQ
Sbjct: 29 NYTVWTMRMEAVLRVHKLWGTIEPG---------SADEE----------KNDMARALLFQ 69
Query: 78 AIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFL 137
+I ++ + ++TS +W ++K + G+ +VK +LQ + EFD L MK+ E +D ++
Sbjct: 70 SIPESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKLKMKDSETIDDYV 129
Query: 138 GRTLIVVNKMKSNGETMEHSTVVSKILRSLT-SKFNYVVCSIEESNDLSILSIDELHGSL 196
GR + K + GE +E S +V K L+SL K+ ++V ++E+ DL + +++ G +
Sbjct: 130 GRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDLKTTTFEDIAGRI 189
Query: 197 LVHEQRM----QGHQEEEHVLKVAQEDRSSRGRGRGAPRGGRGRGRGRQSLNKEVIECYK 252
+E R+ H+++ ++ +E+ + +NKE+ K
Sbjct: 190 KTYEDRVWDDDDSHEDQGKLMTEVEEEVVDDLEEEE-----------EEVINKEIKA--K 236
Query: 253 CHRLGHFQYECPDWEKKVNYAELEEEEELLLM---AYVEPHQTKKQEV-------WYLDS 302
H + E+K + E E L+M Y+ + E+ WYLD+
Sbjct: 237 SHVIDRLLKLIRLQEQKEKEEDDTHEAESLMMHEVVYLNEKNIRPTELESCINNAWYLDN 296
Query: 303 GCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIR-MQLNGITQVISDVYYIPE 361
G SNHM GN+ WF L+E + V+ G+D+ + + KGSI + G +++ DVYYIP+
Sbjct: 297 GASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKILFDVYYIPD 356
Query: 362 LKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCL 421
LK+N+LS+GQ E G I +++ + ++++ S N ++ + S+ + S CL
Sbjct: 357 LKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSRNRLYKV--SLEVENSKCL 414
Query: 422 QAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEK-ICTTCLTGKQHREP 480
Q + E+ + H R GH++ + ++ + K++V+G+ S EK C +CL GKQ R
Sbjct: 415 QLTTTN--ESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCLFGKQARHS 472
Query: 481 VPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVK 540
PK + +RA++ L+L+H D+CGPI PS + KRY+ IDDH+R W L EKSEAF K
Sbjct: 473 FPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLKEKSEAFGK 532
Query: 541 FKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERK 600
FKE+KA VE+E GA I RTDR EF S+EF EFC +GINR LT YTP QNGV ER+
Sbjct: 533 FKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQNGVVERR 592
Query: 601 NRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYF 660
NRT++ + RS+L +P W EAVR ++ NR ++ N+TP E + +KP V +
Sbjct: 593 NRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHKKPNVEHL 652
Query: 661 RIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEE 720
R+F CV++ V KLDD+S+ V+LG SKA+RL P ++I VS+DVVF+E
Sbjct: 653 RVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRDVVFDENR 712
Query: 721 SWDWGRIEEE-------IKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPN 773
SW W E + + E G E + + + ++ E
Sbjct: 713 SWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDENIIEEAET 772
Query: 774 EPISNTPEELVEGRVVRERRV-PSWFADYETREGLEENLNAMMMVTENDPVSFGEAVKNK 832
E + EE R + + + P++ DY +E +++ ++P F EA K+K
Sbjct: 773 EEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAE--HLLLAVNDEPWDFKEANKSK 830
Query: 833 KWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYA 892
+WRDA EI+SIE+N++W L LP G K IGVKWVFK K N DG + K+KARLVAKGY
Sbjct: 831 EWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGSINKYKARLVAKGYV 890
Query: 893 QRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGF 952
QRH VD+ EVFAPVAR++T+R+I+ +AA WE+ LDVK+AFLHGEL+E+V+V QP+GF
Sbjct: 891 QRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGELREDVYVSQPEGF 950
Query: 953 IRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIV 1012
K ++KVY+L KALYGL+QA RAW +++ FE+C E L+ K +G IL+V
Sbjct: 951 TNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEPSLYRKQEGENILVV 1010
Query: 1013 SLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYAR 1072
++YVDDL+ TG++ + FK M+ +F+MSDLGK+ Y+LG+EV Q DGI + RYA+
Sbjct: 1011 AVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQSKDGITLKQERYAK 1070
Query: 1073 DVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGVS 1132
+L M N V P + +LSK + R+DET +++ +G L YL TRPDL Y V
Sbjct: 1071 KILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGCLRYLLHTRPDLSYNVG 1130
Query: 1133 LISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRS 1192
++SR++ P SH A K+ILRYL+GTT G+++KK G N L+ + DS + DLDD +S
Sbjct: 1131 ILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKK-GENAGLIGYSDSSHNVDLDDGKS 1189
Query: 1193 TSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTST 1252
T +F L ++W S+KQ VV LS+ EAE++AA A Q +WL +L ++ E
Sbjct: 1190 TGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQELLAEVIGTECEKV 1249
Query: 1253 EIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPI 1312
I DN I L+KNPVFHG+SKHI R+HF+R+ V +G I++ + Q ADI+TK +
Sbjct: 1250 TIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEVEHVPGVRQKADILTKAL 1309
Query: 1313 KLEQFEKLRGMLGVTEVSK 1331
+F ++R ++GV VSK
Sbjct: 1310 GKIKFLEMRELIGVQGVSK 1328
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 874 bits (2259), Expect = 0.0
Identities = 505/1339 (37%), Positives = 759/1339 (55%), Gaps = 93/1339 (6%)
Query: 26 MENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLKDLKVKNYLFQAIGREILE 85
ME LR ++W +D G +E K+ + LFQ++ +
Sbjct: 1 MEATLRVHKVWETIDPGSDDME-------------------KNDMARALLFQSVPESTIL 41
Query: 86 TILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFLGRTLIVVN 145
+ +TSK +W ++K + G+ +VK +LQ + EFD L MK+ E +D F+GR +
Sbjct: 42 QVGKHKTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEIST 101
Query: 146 KMKSNGETMEHSTVVSKILRSLT-SKFNYVVCSIEESNDLSILSIDELHGSLLVHEQRM- 203
K +S GE +E S +V K L+SL K+ +++ ++E+ DL+ +++ G + +E R+
Sbjct: 102 KSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVC 161
Query: 204 --QGHQEEEHVLKVAQED-----RSSRGRGRGAPRG-GRGRGRGRQSLNKEVIECYKCHR 255
EE+ L A + R RGRGRG G GRG G G Q +K + CY+C +
Sbjct: 162 DEDDSPEEQGKLMYANSESSYDTRGGRGRGRGRSSGRGRG-GYGYQQRDKSKVICYRCDK 220
Query: 256 LGHFQYECPD--------WEKKVNYAELEEEEELLL--MAYVEPHQTKKQEV-------W 298
GH+ EC D E++ N + +E E L++ + Y+ K +E W
Sbjct: 221 TGHYASECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVVYLNERSVKPKEFEACSDNSW 280
Query: 299 YLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRM-QLNGITQVISDVY 357
YLD+G SNHM GN +WF L E + V+ G+D+R+ + KGSI + GI + ++DVY
Sbjct: 281 YLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTDVY 340
Query: 358 YIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKR 417
+IP+LK+N++S+GQ E G + ++D + ++++ S N ++ + + +
Sbjct: 341 FIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKV--DLNVEN 398
Query: 418 SVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQH 477
CLQ EA T+ K++V+G+ ++ ++ C +CL GKQ
Sbjct: 399 VKCLQLEAA---------------------TMVRKELVIGISNIPKEKETCGSCLLGKQA 437
Query: 478 REPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEA 537
R+P PK + +RAS+ L+LVH D+CGPI S + KRYIL IDDHTR W L EKSEA
Sbjct: 438 RQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSEA 497
Query: 538 FVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVA 597
F KF+++K VE+E G I RTD+ EF S EF +FC +GINR LT YTP QNGV
Sbjct: 498 FEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVV 557
Query: 598 ERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVV 657
ER+NRT++ + RS+L ++P W EAVR +I NR +++N+TP E + KP V
Sbjct: 558 ERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNV 617
Query: 658 HYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFE 717
+ R+F C+ + + KLDD+SK V+LG SKA+RL P ++KII +
Sbjct: 618 EHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNN---S 674
Query: 718 EEESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNE--- 774
+ E+ D I L + E G E ++ T+ N S +S E E
Sbjct: 675 DSETRD---ISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQID 731
Query: 775 -----PISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAV 829
P TP + R R+ P++ DY +E +++ ++P F EA
Sbjct: 732 AEETQPSHATPLPTLR-RSTRQVGKPNYLDDYVLMAEIEGE--QVLLAINDEPWDFKEAN 788
Query: 830 KNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAK 889
K K+WRDA EI SIE+N++W L LP K IG+KWVFK K N DG + K+KARLVAK
Sbjct: 789 KLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAK 848
Query: 890 GYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQP 949
GY QRH +DY EVFA VAR++TIRVI+ +AA WEV LDVK+AFLHGEL+E+V+V QP
Sbjct: 849 GYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQP 908
Query: 950 KGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRI 1009
+GF K E KVY+L KALYGLKQA RAW +++ +F +C E ++ + + ++
Sbjct: 909 EGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKL 968
Query: 1010 LIVSLYVDDLIFTGN--DRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC* 1067
LIV++YVDDL+ TG+ D ++C FK M +F+MSDLG++ Y+LG+EV +GI +
Sbjct: 969 LIVAIYVDDLLVTGSSLDLILC--FKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGIILRQ 1026
Query: 1068 RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDL 1127
RYA ++ M + N V P G +L K + + E +++++G L Y+ TRPDL
Sbjct: 1027 ERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTRPDL 1086
Query: 1128 MYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDL 1187
Y V ++SR++ P SH A K++LRYLKGT G++ K+G + L+ + DS ++ DL
Sbjct: 1087 SYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKS-GLVGYSDSSHSADL 1145
Query: 1188 DDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVE 1247
DD +ST+ +F L ++W S+KQ VVALS+ EAE++AA A Q +WL + ++
Sbjct: 1146 DDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGT 1205
Query: 1248 EKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADI 1307
I DN I L+KN VFHG+SKHI R+HF+R+ V + ++++ + +Q ADI
Sbjct: 1206 TSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADI 1265
Query: 1308 MTKPIKLEQFEKLRGMLGV 1326
+TKP+ +F ++R ++GV
Sbjct: 1266 LTKPLGRIKFREMRELVGV 1284
>At2g05960 putative retroelement pol polyprotein
Length = 1200
Score = 737 bits (1903), Expect = 0.0
Identities = 443/1279 (34%), Positives = 681/1279 (52%), Gaps = 177/1279 (13%)
Query: 91 ETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFLGRTLIVVNKMKSN 150
+TSK +W+ ++ + G+ +VK +L+ + EFD L MK+ E +D GR + K S
Sbjct: 41 KTSKAVWDKIQSRNLGAERVKEAKLKTLMAEFDKLKMKDNETIDECAGRLSEISTKSTSL 100
Query: 151 GETMEHSTVVSKILRSL-TSKFNYVVCSIEESNDLSILSIDELHGSLLVHEQRM------ 203
GE +E + VV K L+SL T K+ ++V ++E+ DL + ++ G + +E ++
Sbjct: 101 GEDIEETKVVKKFLKSLPTKKYIHIVAALEQVLDLKNTTFKDIVGRIKTYEDKIWVLITC 160
Query: 204 ---QGHQEEEHVLKVAQEDRSSRGRGRGAPRGGRGRGRGRQSLNKEVIECYKCHRLGHFQ 260
+ +EE+ V+ V E+ +++E+ + ++
Sbjct: 161 LKKEAEEEEKSVVGVEAEEELV--------------------ISREITLRLLVIAVINYA 200
Query: 261 YECPD-------WEKKVNYAELEEEEEL--LLMAYV----------EPHQTKKQEVWYLD 301
CPD +++ AE ++++E+ L+M V E ++ + WYLD
Sbjct: 201 SNCPDRLLKLIKLQERQQEAEDDDDDEVESLMMHEVVYLNEGNMNLEIYEACSDKAWYLD 260
Query: 302 SGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIR-MQLNGITQVISDVYYIP 360
+G SNHM GN++WF L+E + VK G+D+R+ + KGSI + NG + +++VYYIP
Sbjct: 261 NGASNHMTGNRDWFCKLDEMVTGKVKFGDDSRIDIRGKGSILFLTKNGEPKTLANVYYIP 320
Query: 361 ELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVC 420
+LK+N++S+GQ E G + ++D + ++++ S N ++ + + K + C
Sbjct: 321 DLKSNIISLGQATEAGCDVRLKDNYLTLHDRDGNLLVKATRSRNRLYRV--ELKVKNTKC 378
Query: 421 LQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREP 480
LQ A++ H R GH+N + ++ + K+ V+G+PS ++IC +C+ GKQ R+
Sbjct: 379 LQLAALNDLTKW--HARLGHINLETIKAMVTKEFVIGIPSAPKEKEICASCMLGKQARQV 436
Query: 481 VPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVK 540
PK + +RAS+ L+L+H D+CGPI P + +RYIL IDDH+R W + L EKSEAF K
Sbjct: 437 FPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDHSRFMWSFLLKEKSEAFGK 496
Query: 541 FKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERK 600
FK +KA VE+E G I LRTDR EF S EF FC +GI R LT YTP QNGV ER+
Sbjct: 497 FKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTAPYTPQQNGVVERR 556
Query: 601 NRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYF 660
NRT++ + RS++ VP W EA+R ++ NR A+ N+TP EA +KP V +
Sbjct: 557 NRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALINQTPYEALKKKKPNVEHL 616
Query: 661 RIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEE 720
R+F CV++ V KLD++S+ V+LG SKA+ L P ++KIIVS+DVVF+E +
Sbjct: 617 RVFGCVSYAKVEFPHLRKLDERSRILVYLGTETGSKAYTLLDPTTRKIIVSRDVVFDENK 676
Query: 721 SWDWG-----RIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEP 775
SW W I++E + L E NEE T + + S+N E +EP
Sbjct: 677 SWKWANSELIEIQKEPGMFTLAQTEFHNNEEVENETSEEIEENEAEDSTNKDAEDGLDEP 736
Query: 776 ISNTPEEL----VEGRVVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAVKN 831
P V R R+ P+ DY +E ++++ ++P F EA K
Sbjct: 737 SVPEPNHSDDVPVFTRSGRQVIKPAHLNDYVLLAEIEG--ERLLLLINDEPWDFKEANKY 794
Query: 832 KKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGY 891
++WRDA EI+SI +N++W L LP G+KPIG+KWVFK K N DG++ K KARLVAKGY
Sbjct: 795 REWRDACDEEIKSIIKNRTWSLVSLPVGIKPIGLKWVFKIKRNSDGNITKHKARLVAKGY 854
Query: 892 AQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKG 951
Q+H VD+ EVFAPVAR++T+R I+ +AA WEV LDVK+AFLHGELKE V+V QP+G
Sbjct: 855 VQKHVVDFDEVFAPVARIETVRFIIALAASNGWEVHHLDVKTAFLHGELKENVYVTQPEG 914
Query: 952 FIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILI 1011
F+ KG E+KVY+L KALY
Sbjct: 915 FVTKGSEEKVYKLHKALY------------------------------------------ 932
Query: 1012 VSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYA 1071
+YVDDL+ TG+ + D+FK M F+MSDLG++ Y+LG+EV Q DGI + RYA
Sbjct: 933 --VYVDDLLVTGSSPKLIDDFKKGMSKNFEMSDLGRLTYYLGIEVTQEEDGIILKQERYA 990
Query: 1072 RDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGV 1131
+ +L + + ++ P G +LSK +D +++ +G L
Sbjct: 991 KKILEEAGINECKSILVPMNSGLELSKALDEKSIDGQQYRRSIGCL-------------- 1036
Query: 1132 SLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDLDDRR 1191
R+M P SH A K++LRYL+GTT G+ +KK G L+ + D+ ++ D DD
Sbjct: 1037 ----RYMQDPRESHGAALKQVLRYLQGTTGYGLVFKK-GDKTGLVGYSDASHSVDADDD- 1090
Query: 1192 STSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTS 1251
+ A + C E+ +
Sbjct: 1091 ---------------------------------LLAEVIGTPC-------------ERVT 1104
Query: 1252 TEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKP 1311
+ DN I L+KNPVFHG+SKHI ++HF+R+ V +G + + + Q A+I+TK
Sbjct: 1105 LRV--DNKSAIALTKNPVFHGRSKHIHRKYHFIRECVENGQVSVEHVPGVKQRANILTKA 1162
Query: 1312 IKLEQFEKLRGMLGVTEVS 1330
+ +F+ +R ++GV ++S
Sbjct: 1163 LAKIKFKDMRDLIGVQDLS 1181
>At1g37110
Length = 1356
Score = 654 bits (1686), Expect = 0.0
Identities = 425/1300 (32%), Positives = 692/1300 (52%), Gaps = 75/1300 (5%)
Query: 70 KVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLA-MK 128
+ KN + I +L + T+ ++W ++ +KY +S R Q+ F +++ M
Sbjct: 81 QAKNIIINHISDVVLLKVNHYATTADLWATLNKKYMETSLPNRIYTQLKLYSFKMVSTMT 140
Query: 129 EGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSILS 188
+ VD FL +V ++ S ++ IL SL + + +++ N L+
Sbjct: 141 IDQNVDEFLR----IVAELGSLEIQVDEEVQAILILNSLPASHIQLKHTLKYGN--KTLT 194
Query: 189 IDELHGSLLVHEQRM-QGHQEEEHVLKVAQEDRSSRGRGRGAPRGGRGRGRGRQSLNKEV 247
+ ++ S E+ + + ++ V R R +GG+G+GR R + +K
Sbjct: 195 VQDVTSSAKSLERELAEAVDLDKGQAAVLYTTERGRPLVRNNQKGGQGKGRSRSN-SKTK 253
Query: 248 IECYKCHRLGHFQYECPDWEKKVNYAELEEE----EELLLMAYVEPHQTKKQEVWYLDSG 303
+ C+ C + GH + +C +KK+ E E+L+ + ++ +++W LDSG
Sbjct: 254 VPCWYCKKEGHVKKDCYSRKKKMESEGQGEAGVITEKLVFSEALSVNEQMVKDLWILDSG 313
Query: 304 CSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGIT-QVISDVYYIPEL 362
C++HM ++WF+ +E + T+ LG+D + +G+IR+ +G T +++ +V Y+P L
Sbjct: 314 CTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKILENVKYVPHL 373
Query: 363 KNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQ 422
+ NL+S G L + G +G + F + + + +G ++L +C
Sbjct: 374 RRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTALRGSLSNG---LYVLDGSTVMSELC-N 429
Query: 423 AEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREP-- 480
AE K A + H R GH++ L+ L+ K ++ E + C C+ GK +
Sbjct: 430 AETDKVKTA-LWHSRLGHMSMNNLKVLAGKGLIDRKEINEL--EFCEHCVMGKSKKVSFN 486
Query: 481 VPKRSLWRASKQLQLVHSDICGP--IKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAF 538
V K + + L VH+D+ G + PS S K+Y LS IDD TRK W+YFL K E F
Sbjct: 487 VGKHT---SEDALSYVHADLWGSPNVTPSI-SGKQYFLSIIDDKTRKVWLYFLKSKDETF 542
Query: 539 VKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAE 598
KF E+K+ VE ++ + CLRTD EF ++ FD +C+ GI R T TYTP QNGVAE
Sbjct: 543 DKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAE 602
Query: 599 RKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVH 658
R NRTIM VR +LN+ V +VFW+EA ++ NR P A+ + PEE W KP
Sbjct: 603 RMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMWLNRKPGYK 662
Query: 659 YFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEE 718
+ R F +A+VH Q + KL ++ K FLG +K +++++ +K ++S++VVF+E
Sbjct: 663 HLRKFGSIAYVH---QDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEEKCVISRNVVFQE 719
Query: 719 EESWDWGRIEEE----IKLDILECGEEDQNE--EENGRTDLNNLSSNS------SSSSNS 766
+ +++E+ + E +QN+ E +G + L S+S SS+S
Sbjct: 720 SVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPITEGEQSSDS 779
Query: 767 LPESLPNEPISNTPE-------ELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTE 819
E +E TP+ +L RV R P+ F + E ++ ++V E
Sbjct: 780 EEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTE-------ESSVTFALVVVE 832
Query: 820 N----DPVSFGEAVKN---KKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTK 872
N +P S+ EA+++ +KW A E++S+ +N +W+L PK K IG +W+FK K
Sbjct: 833 NCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLK 892
Query: 873 LNEDG-DVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDV 931
G + +FKARLVAKGY QR VDY E+FAPV + +IR+++ + E+ Q+DV
Sbjct: 893 SGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDV 952
Query: 932 KSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDF 991
K+ FLHG+L+EE++++QP+GF+ E+KV RLKK+LYGLKQ+ R W R + + + F
Sbjct: 953 KTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQF 1012
Query: 992 ERCPSEHILFTKSKGGR-ILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKY 1050
R + ++ K + + LYVDD++ G + + K + EF+M D+G
Sbjct: 1013 IRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMKDMGGASR 1072
Query: 1051 FLGVEVKQC*DG--IFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLS---KDEGGVRV 1105
LG+++ + G + + Y R VL RF+M + P KL+ +++ V
Sbjct: 1073 ILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVREEDECVDT 1132
Query: 1106 DETLFKQVVGSLMYLTV-TRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGI 1164
D + VGS+MY + TRPDL Y + LISR+MS P HW A K ++RYLKG DL +
Sbjct: 1133 DVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNL 1192
Query: 1165 FYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEY 1224
+ K + + + DS+YA DLD RRS S +VF +G VSW + Q VVA+STTEAEY
Sbjct: 1193 VFTK-EKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEY 1251
Query: 1225 IAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFL 1284
IA A A + +W+ +L+ +G+++ +I CD+ I LSKN V+H ++KHIDVRF+++
Sbjct: 1252 IALAEAAKEAMWIKGLLQDMGMQQ-DKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYI 1310
Query: 1285 RDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGML 1324
RD+V G + + ++ D +TK I + +F+ G+L
Sbjct: 1311 RDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVL 1350
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 649 bits (1673), Expect = 0.0
Identities = 437/1352 (32%), Positives = 702/1352 (51%), Gaps = 98/1352 (7%)
Query: 45 VLETGTTPASEEQMKAVEEAKLKDL----------KVKNYLFQAIGREILETILDKETSK 94
VL T P +EE+ + E+ K +D K KN +F + ++L I +T+
Sbjct: 13 VLGTTPKPLTEEEEEDPEKRKKRDADEVARLERCDKAKNVIFLNVADKVLRKIELCKTAA 72
Query: 95 EIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETM 154
E W ++ + + S R Q+ F M+E +K+D + L +V + +
Sbjct: 73 EAWETLDRLFMIRSLPHRVYTQL---SFYTFKMQENKKIDENIDDFLKIVADLNHLQIDV 129
Query: 155 EHSTVVSKILRSLTSKFNYVVCSIEESNDLSILSIDELHGSLLVHEQRMQGHQEEEHVLK 214
+L SL ++++ +V +++ SN L +D++ + ++ + Q V+
Sbjct: 130 TDEVQAILLLSSLPARYDGLVETMKYSNSREKLRLDDV--MVAARDKERELSQNNRPVV- 186
Query: 215 VAQEDRSSRGR--GRGAPRGGRGRGRGRQSLNKEVIECYKCHRLGHFQYECPDW-EKKVN 271
E +RGR G+ +G +G+ R R C+ C + GHF+ +C W E+ +
Sbjct: 187 ---EGHFARGRPDGKNNNQGNKGKNRSRSKSADGKRVCWICGKEGHFKKQCYKWIERNKS 243
Query: 272 YAELEEEEELLLMAYVEPHQTKK---------------QEVWYLDSGCSNHMKGNKEWFL 316
+ + E L E W LD+GCS HM K+WF
Sbjct: 244 KQQGSDNGESSLAKSTEAFNPAMVLLATDETLVVTDSIANEWVLDTGCSFHMTPRKDWFK 303
Query: 317 DLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGITQVI-SDVYYIPELKNNLLSIGQLQEK 375
D +E S VK+GNDT V GSI+++ + +QVI +DV Y+P + NL+S+G L+++
Sbjct: 304 DFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDR 363
Query: 376 GLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*H 435
G QDG K+ ++G ++L + + AE + E + H
Sbjct: 364 GCWFKSQDGILKI---VKGCSTILKGQKRDTLYILDGVTEEGESHSSAEV--KDETALWH 418
Query: 436 CRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREP-VPKRSLWRASKQLQ 494
R GH++ KG+ L KK + ++ E C C+ GKQHR P + + + ++L
Sbjct: 419 SRLGHMSQKGMEILV-KKGCLRREVIKELE-FCEDCVYGKQHRVSFAPAQHVTK--EKLA 474
Query: 495 LVHSDICG-PIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIG 553
VHSD+ G P P+ + +Y +SF+DD++RK W+YFL +K EAF KF E+K VE +
Sbjct: 475 YVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSD 534
Query: 554 AHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLN 613
+ LRTD E+ ++ F++FC+ +GI R T YTP QNG+AER NRTIM+ VRSML+
Sbjct: 535 RKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLS 594
Query: 614 EKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPD 673
+ K FW+EA V++ NR P A+ PEE W+G P + R F C+A++H
Sbjct: 595 RSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGALPDLSSLRKFGCLAYIHAD- 653
Query: 674 QRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESW-----DWGRIE 728
+ KL+ +SKK +F + K ++++V KK ++S++V+F E+ + D
Sbjct: 654 --QGKLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRNVIFREQVMFKDLKGDSQNTI 711
Query: 729 EEIKLDILECGEEDQNEE---ENGRTDLNNLSSNSSSSSNSLPESLPN-------EPISN 778
E L+ L + ++E + G T N+ S +++S N + S + E S+
Sbjct: 712 SESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHNPVLNSPTHSQDEESEEEDSD 771
Query: 779 TPEELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTEND----PVSFGEAVKN--- 831
E+L ++VR+R + A+ + E N+ +E+D P S+ EA+ +
Sbjct: 772 AVEDLSTYQLVRDRVRRTIKANPKYN---ESNMVGFAYYSEDDGKPEPKSYQEALLDPDW 828
Query: 832 KKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDG-DVEKFKARLVAKG 890
+KW AM E+ S+ +N +W+L P+ VK IG +WVF K G + +F ARLVAKG
Sbjct: 829 EKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKG 888
Query: 891 YAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPK 950
+ Q+ VDY E+F+PV + +IR +L + ++ E+ Q+DVK+AFLHG L+EE+++ QP+
Sbjct: 889 FTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPE 948
Query: 951 GFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAY-----FVREDFERCPSEHILFTKSK 1005
GF K +KV LK++LYGLKQ+ R W R + + + R ++ C + F K
Sbjct: 949 GFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSC----VYFKKCN 1004
Query: 1006 GGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DG--I 1063
G + + LYVDD++ ++ +E K + EF+M DLG K LG+E+ + D +
Sbjct: 1005 GDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLL 1064
Query: 1064 FIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSK------DEGGVRVDETLFKQVVGSL 1117
+ Y + VL F M ++ V P KL +E R+ + +GS+
Sbjct: 1065 TLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSI 1124
Query: 1118 MYLTV-TRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLM 1176
MY + TRPDL Y + +ISRFMS P HW A K +LRY++GT + ++K + L
Sbjct: 1125 MYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRK-QEDFLLR 1183
Query: 1177 AFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVW 1236
+ DSDY + D RRS + +VF +G +SW SK Q VVA+S+TEAEY+A + +W
Sbjct: 1184 GYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALW 1243
Query: 1237 LIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLS 1296
L ++G + E+ D+ I L+KN V H ++KHID+R HF+RD++ G+IK+
Sbjct: 1244 LKGFAAELG-HSQDYVEVHSDSQSAITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVV 1302
Query: 1297 YCNSQDQIADIMTKPIKLEQFEKLRGMLGVTE 1328
++ A+I TK + L +FE ML VTE
Sbjct: 1303 KIATECNPANIFTKTVPLAKFEGALNMLRVTE 1334
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 647 bits (1668), Expect = 0.0
Identities = 437/1394 (31%), Positives = 708/1394 (50%), Gaps = 127/1394 (9%)
Query: 12 IPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPAS--------EEQMKAVEE 63
+ KFDG DY +M E L ++ L TG + EE+++ E
Sbjct: 8 VEKFDGRGDY-TMWKEKLLAHMDILGLNTALKESESTGEKKSVLDESDEDYEEKLEKFEA 66
Query: 64 AKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFD 123
+ K K ++ + ++ +L I + T+ + ++ + Y SK ++ ++ +
Sbjct: 67 LEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLALDKLY--MSKALPNRIYPKQKLYS 124
Query: 124 LLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESND 183
M E V+ + L ++ +++ + +L +L F+ + +++ S+
Sbjct: 125 F-KMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLKYSSG 183
Query: 184 LSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRGAPRGG-RGRGRGRQS 242
SIL++DE+ ++ E + ++ +KV E + + +G +G+G+G++
Sbjct: 184 KSILTLDEVAAAIYSKELELGSVKKS---IKVQAEGLYVKDKNENKGKGEQKGKGKGKKG 240
Query: 243 LNKEVIECYKCHRLGHFQYECPDWEK----------------KVNYAELEEEEELLLMAY 286
+K+ C+ C GHF+ CP+ K K N AE ++
Sbjct: 241 KSKKKPGCWTCGEEGHFRSSCPNQNKPQFKQSQVVKGESSGGKGNLAEAAGYYVSEALSS 300
Query: 287 VEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQ- 345
E H ++ W LD+GCS HM +EWF + ED +V++GN T V G+IR++
Sbjct: 301 TEVHL---EDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKN 357
Query: 346 LNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNI 405
+G+T V+++V YIP++ NLLS+G ++ G +DG ++ ++ T +
Sbjct: 358 SDGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGILRI--KAGNQVLLTGRRYDT 415
Query: 406 MFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPE 465
++ L S+ + A + + H R H++ K + L K + S
Sbjct: 416 LYLLNWKPVASESLAVVKRA---DDTVLWHQRLCHMSQKNMEILVRKGFLD--KKKVSSL 470
Query: 466 KICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICG-PIKPSWNSDKRYILSFIDDHTR 524
+C C+ GK R+ + ++L+ +HSD+ G P P +Y +S IDD TR
Sbjct: 471 DVCEDCIYGKAKRKSF-SLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTR 529
Query: 525 KTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQ 584
K WVYF+ K EAF KF E+ VE + + LRTD EF + FD FC S GI+R
Sbjct: 530 KVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRH 589
Query: 585 LTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENK 644
T YTP QNGVAER NRTIM VRSML++ +PK FW+EA V + N+ P A+ +
Sbjct: 590 RTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFE 649
Query: 645 TPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPV 704
P++ WSG PV Y R + CVA VH D KL+ ++KK V +G K +++++
Sbjct: 650 IPDKKWSGNPPVYSYLRRYGCVAFVHTDD---GKLEPRAKKGVLIGYPVGVKGYKVWILD 706
Query: 705 SKKIIVSKDVVFEEEESW-DWGRIEEEIKLDILECGEEDQNE---EENGRTDLNNLSSNS 760
+K +VS++++F+E + D + +E + + E+DQ E + + + +S
Sbjct: 707 ERKCVVSRNIIFQENAVYKDLMQRQENVSTE-----EDDQTGSYLEFDLEAERDVISGGD 761
Query: 761 SSSSNSLPESLPNEPISNTPE-------------------ELVEGRVVRERRVPSWFADY 801
N++P P P+ +TP LV R RE R P F D
Sbjct: 762 QEMVNTIP--APESPVVSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRFDD- 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNK------------KWRDAMSAEIESIERNQ 849
E+ A + T D GEAV+ + KW+ AM EI+S E+N
Sbjct: 819 -------EDYYAEALYTTED----GEAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNN 867
Query: 850 SWELTVLPKGVKPIGVKWVFKTKLNEDGDVE-KFKARLVAKGYAQRHEVDYTEVFAPVAR 908
+W + P+ + IG +W+FK KL G E +FKARLVAKGYAQ+ +DY E+FAPV +
Sbjct: 868 TWTIVTRPENQRIIGCRWIFKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVK 927
Query: 909 LDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKAL 968
+IRV+L + AQ E+ QLDVK+AFLHGELKE++++ P+G+ + ++V L KAL
Sbjct: 928 HVSIRVLLSIVAQEDLELEQLDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKAL 987
Query: 969 YGLKQALRAWYSRIEAY-----FVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTG 1023
YGLKQA + W + + + FV+ ++ C +L G ++ + +YVDD++
Sbjct: 988 YGLKQAPKQWNEKFDNFMKEICFVKSAYDSCAYTKVL----PDGSVMYLLIYVDDILVAS 1043
Query: 1024 NDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEV--KQC*DGIFIC*RRYARDVLARFDMR 1081
++ K+++ + F+M DLG K LG+E+ + +++ Y +L ++M
Sbjct: 1044 KNKEAITALKANLGMRFEMKDLGAAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMA 1103
Query: 1082 DSNAVKNP--------TVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTV-TRPDLMYGVS 1132
++ P KL +DE ++ + VGS+MY + TRPDL Y V
Sbjct: 1104 EAKPAMTPLGAHFKFQAATEQKLIRDEDFMK--SVPYSSAVGSIMYAMLGTRPDLAYPVG 1161
Query: 1133 LISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRS 1192
+ISRFMS P HWL K +LRY+KGT + YKK S+ ++ + D+DYA DLD RRS
Sbjct: 1162 IISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLCYKK-SSSFSIVGYCDADYAADLDKRRS 1220
Query: 1193 TSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTST 1252
+ VF LG +SW S Q VVA STTE+EY++ + +WL +L+ G E+K S
Sbjct: 1221 ITGLVFTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQK-SV 1279
Query: 1253 EIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPI 1312
EI CD+ I LSKN V H ++KHIDV++HF+R++++DG +++ +++ ADI TK +
Sbjct: 1280 EIFCDSQSAIALSKNNVHHERTKHIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVL 1339
Query: 1313 KLEQFEKLRGMLGV 1326
+ +F+ +L V
Sbjct: 1340 AVSKFQAALNLLRV 1353
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 642 bits (1656), Expect = 0.0
Identities = 430/1382 (31%), Positives = 707/1382 (51%), Gaps = 115/1382 (8%)
Query: 12 IPKFDGHYDYWSMTMENFLRSKEMWSLVD----EGIPVLETGTTPASEEQMKAVEEA--K 65
+ KFDG DY + E L EM L++ E V+E TT S+ + E A K
Sbjct: 8 VEKFDGDGDY-ILWKEKLLAHMEMLGLLEGLGEEEEAVVEDSTTEISDGGNQDPETATSK 66
Query: 66 LKDL-------KVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVM 118
L+D K ++ + ++G +L ++ ++T+ + + Q + S R L+
Sbjct: 67 LEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPNRIYLKQR 126
Query: 119 RREFDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSI 178
+ M E ++ + +++ +++ + +L SL +F+ + ++
Sbjct: 127 LYGYK---MSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKETL 183
Query: 179 EESNDLSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRGAPRG-GRGRG 237
+ + L ++E+ ++ ++ +LK + + RGR RG G +
Sbjct: 184 KYCK--TTLHLEEITSAI---RSKILELGASGKLLKNNSDGLFVQDRGRSETRGKGPNKN 238
Query: 238 RGRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELEEEEE----------------- 280
+ R C+ C + GHF+ +C W+++ E E
Sbjct: 239 KSRSKSKGAGKTCWICGKEGHFKKQCYVWKERNKQGSTSERGEASTVTARVTDAAALVVS 298
Query: 281 --LLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVA 338
LL A V P + W LD+GCS HM K+W +D +E S V++GNDT V
Sbjct: 299 RALLGFAEVTP------DTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKG 352
Query: 339 KGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIM 397
G +R++ +G T +++DV YIPE+ NL+S+G L++KG + G +F + +
Sbjct: 353 IGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILTIFK--NDLTV 410
Query: 398 QTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVG 457
T + ++FL + + + E + E + H R GH+ KGL+ L K +
Sbjct: 411 LTGKKESTLYFLQGTTLAGEANVIDKE---KDETSLWHSRLGHIGAKGLQVLVSKGHL-- 465
Query: 458 LPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDK-RYIL 516
+K +H +L VHSD+ G ++ K +Y +
Sbjct: 466 -------DKNIMISFGAAKHV----------TKDKLDYVHSDLWGSTNVPFSIGKCQYFI 508
Query: 517 SFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFC 576
+FIDD TR+TW+YF+ K EAF KF E+K +E + + L TD EF + EFD FC
Sbjct: 509 TFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFC 568
Query: 577 RSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRC 636
R +G+ R T YTP QNGVAER NRTIMN VR ML+E + K FW+EA V + N+
Sbjct: 569 RKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKS 628
Query: 637 PIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESK 696
P ++E PEE W+G P + F VA++H + KL+ ++KK +FLG D K
Sbjct: 629 PSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIH---SDQGKLNPRAKKGIFLGYPDGVK 685
Query: 697 AWRLYVPVSKKIIVSKDVVFEEEESW---DWGRIEEEIK---------LDILECGEEDQN 744
+++++ +K +VS+D+VF+E + + + EE K +++ +D+N
Sbjct: 686 RFKVWLLEDRKCVVSRDIVFQENQMYKELQKNDMSEEDKQLTEVERTLIELKNLSADDEN 745
Query: 745 EEENG-RTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYET 803
+ E G ++ S+ S+S + E ++ L R+ R+ R P F + +
Sbjct: 746 QSEGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEED- 804
Query: 804 REGLEENLNAMMMVTEN----DPVSFGEAVKN---KKWRDAMSAEIESIERNQSWELTVL 856
+ + + +TE+ +P ++ EA+++ +KW+ A E++S+++N +W++
Sbjct: 805 ----DSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDK 860
Query: 857 PKGVKPIGVKWVFKTKLNEDG-DVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVI 915
P+G + IG KW+FK K G + ++KARLVAKG++QR +DY E+F+PV + +IR +
Sbjct: 861 PEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYL 920
Query: 916 LEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQAL 975
L + QF E+ QLDVK+AFLHG L E + + QP+G+ + +KV LKK+LYGLKQ+
Sbjct: 921 LSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSP 980
Query: 976 RAWYSRIEAYFVREDFERCPSEHILFTKS-KGGRILIVSLYVDDLIFTGNDRVMCDEFKS 1034
R W R +++ + ++R ++T+ G + + LYVDD++ ++ + K
Sbjct: 981 RQWNQRFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKE 1040
Query: 1035 SMMLEFDMSDLGKMKYFLGVEV-KQC*DGIF-IC*RRYARDVLARFDMRDSNAVKNPTVP 1092
S+ EF+M DLG + LG+E+ + GI + Y VL F M S + P
Sbjct: 1041 SLNREFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGA 1100
Query: 1093 GTKL-SKDEGGVRVDETLFKQV-----VGSLMYLTV-TRPDLMYGVSLISRFMSSPTMSH 1145
KL + +E + D K V +GS+MY + +RPDL Y V ++SRFMS P+ H
Sbjct: 1101 HFKLRAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEH 1160
Query: 1146 WLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVV 1205
W A K ++RY+KGT D + +KK ++ + DSDYA DLD RRS + FVF G +
Sbjct: 1161 WQAVKWVMRYMKGTQDTCLRFKK-DDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTI 1219
Query: 1206 SWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLS 1265
SW S Q VVALSTTEAEY+A A + +WL + ++G E+ + E+MCD+ I LS
Sbjct: 1220 SWKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQ-DAVEVMCDSQSAIALS 1278
Query: 1266 KNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLG 1325
KN V H ++KHIDVR+HF+R+ + DG I++ ++ ADI TK + + + ++ +L
Sbjct: 1279 KNSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLLR 1338
Query: 1326 VT 1327
V+
Sbjct: 1339 VS 1340
>At3g45520 copia-like polyprotein
Length = 1363
Score = 631 bits (1628), Expect = 0.0
Identities = 441/1399 (31%), Positives = 692/1399 (48%), Gaps = 130/1399 (9%)
Query: 12 IPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQ-------------- 57
+ KFDG DY +M E L +M L VL TP +E+
Sbjct: 8 VEKFDGRGDY-TMWKEKLLAHIDMLGLS----AVLRESETPMGKERDSEKSDEDEKEERE 62
Query: 58 -MKAVEEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQ 116
M+A EE K K ++ + ++ +L I + ++ + ++ + Y + R L+
Sbjct: 63 KMEAFEEKKRK---ARSTIVLSVSDRVLRKIKKETSAAAMLEALDRLYMSKALPNRIYLK 119
Query: 117 VMRREFDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVC 176
F M E ++ + L +V +++ + +L SL F+ +
Sbjct: 120 QKLYSFK---MSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKD 176
Query: 177 SIEESNDLSILSIDELHGSLLVHE-------QRMQGHQEEEHVLKVAQEDRSSRGRGRGA 229
+++ S+ ++LS+DE+ ++ E + ++G E +V A+ +RGR
Sbjct: 177 TLKYSSGKTVLSLDEVAAAIYSRELEFGSVKKSIKGQAEGLYVKDKAE----NRGRSEQ- 231
Query: 230 PRGGRGRGRGRQSLNKEVIECYKCHRLGHFQYECPDWEK----------------KVNYA 273
+ +G+G++S +K C+ C GH + CP+ K K N
Sbjct: 232 ----KDKGKGKRSKSKSKRGCWICGEDGHLKSTCPNKNKPQFKNQGSNKGESSGGKGNLV 287
Query: 274 E----LEEEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLG 329
E E + + + ++ W +D+GC HM +EW D +E+ +V++G
Sbjct: 288 EGSVNFVESAGMFVSEALSSTDIHLEDEWIMDTGCIYHMTHKREWLEDFDEEAGGSVRMG 347
Query: 330 NDTRMAVVAKGSIRM-QLNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKV 388
N + V G++R+ NG+T + +V YIP++ NLLS+G ++ G ++G ++
Sbjct: 348 NKSISRVKGVGTVRIVNDNGLTVTLQNVRYIPDMDRNLLSLGTFEKAGHKFESENGMLRI 407
Query: 389 FHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRT 448
++ + ++ L A S+ A A + + + H R H++ K +
Sbjct: 408 --KSGNQVLLEGRRYDTLYILHGKPATDESL---AVARANDDTVLWHRRLCHMSQKNMSL 462
Query: 449 LSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICG-PIKPS 507
L K + S C C+ G+ + + K+L+ VHSD+ G P P
Sbjct: 463 LIKKGFLD--KKKVSMLDTCEDCIYGRAKKIGF-NLAQHDTKKKLEYVHSDLWGAPTVPM 519
Query: 508 WNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEF 567
+ +Y +SFIDD+TRK WVYFL K EAF KF + + VE + G + LRTD EF
Sbjct: 520 SLGNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEF 579
Query: 568 TSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVR 627
+ FD FC +G R T YTP QNGV ER NRTIM VRSML + +PK FW+EA
Sbjct: 580 CNRMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATH 639
Query: 628 WCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCV 687
V + N+ P A+ + P++ WSG+ P+ Y R + CV VH KL+ ++KK V
Sbjct: 640 TAVLLINKTPCSAINFEFPDKRWSGKAPIYSYLRRYGCVTFVHTDG---GKLNLRAKKGV 696
Query: 688 FLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESW-DWGRIEEEIKLDILECGEEDQNEE 746
+G K +++++ KK +VS++V F+E + D + +E++ EED +
Sbjct: 697 LIGYPSGVKGYKVWLIEEKKCVVSRNVSFQENAVYKDLMQRKEQVSC------EEDDHAG 750
Query: 747 ENGRTDLNNLSSNSSSSSNSLPESLP--NEPISNTPE-------------------ELVE 785
DL NSS S + P +++TP LV
Sbjct: 751 SYIDLDLEADKDNSSGGEQSQAQVTPATRGAVTSTPPRYETDDIEETDVHQSPLSYHLVR 810
Query: 786 GRVVRERRVPSWFADYETREGLEENLNAMMMVTEN----DPVSFGEAVKNK---KWRDAM 838
R RE R P F D E+ + TE+ +P + EAV+++ KWR AM
Sbjct: 811 DRERREIRAPRRFDD-------EDYYAEALYTTEDGDAVEPADYKEAVRDENWDKWRLAM 863
Query: 839 SAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVE-KFKARLVAKGYAQRHEV 897
+ EIES +N +W P+ + IG +W++K K G E +FKARLVAKGYAQR V
Sbjct: 864 NEEIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGV 923
Query: 898 DYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGE 957
DY E+FAPV + +IR++L + AQ + E+ QLDVK+AFLHGELKE++++ P+G +
Sbjct: 924 DYHEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTAFLHGELKEKIYMMPPEGCESLFK 983
Query: 958 EDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKS-KGGRILIVSLYV 1016
E++V L K+LYGLKQA R W + Y F+R + +TK + + YV
Sbjct: 984 ENEVCLLNKSLYGLKQAPRQWNEKFNHYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYV 1043
Query: 1017 DDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DG--IFIC*RRYARDV 1074
DD++ N+ D K + ++F+M DLG K LG+E+ + +++ Y V
Sbjct: 1044 DDMLVAANNMQAIDALKKELSIKFEMKDLGAAKKILGIEIIIDREAGVLWLSQESYLNKV 1103
Query: 1075 LARFDMRDSNAVKNPTVPGTKL-SKDEGGVRVDETLFKQV-----VGSLMYLTV-TRPDL 1127
L F+M +S P K+ S E + +E V VGS+MY + TRPDL
Sbjct: 1104 LKTFNMLESKPALTPLGAHLKMKSATEEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDL 1163
Query: 1128 MYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDL 1187
Y V ++SRFMS P HWL K +LRY+KGT D + YK+ S+ + + D+DYA DL
Sbjct: 1164 AYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCYKR-NSDFSICGYCDADYAADL 1222
Query: 1188 DDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVE 1247
D RRS + VF LG +SW S Q VVA S+TE EY++ + +WL +L+ G E
Sbjct: 1223 DKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYE 1282
Query: 1248 EKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADI 1307
+K + EI CD+ I LSKN V H ++KHIDV+FHF+R+++ DG +++S +++ ADI
Sbjct: 1283 QK-NVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKNPADI 1341
Query: 1308 MTKPIKLEQFEKLRGMLGV 1326
TK + + +F+ L V
Sbjct: 1342 FTKVLPVNKFQTALDFLRV 1360
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 607 bits (1564), Expect = e-173
Identities = 423/1366 (30%), Positives = 690/1366 (49%), Gaps = 94/1366 (6%)
Query: 12 IPKFDGHYDYWSMTMENFLRSKEMW----SLVDEGIPVLETGTTPASEEQMKAVEEAKLK 67
+ KFDG DY +M E + ++ +L +E V + +EE+ K EE +
Sbjct: 8 VEKFDGRGDY-TMWKEKLMAHLDILGLSVALKEEDDLVEKVAEMQLTEEEEK--EEVLRR 64
Query: 68 DL------KVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+L K ++ + ++ +L I ++++ + + + Y + R +++
Sbjct: 65 ELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKALPNRIY---QKQK 121
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
M E ++ + L ++ +++ + +L SL F+ + +++
Sbjct: 122 LYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYG 181
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQED----RSSRGRGRGAPRGGRGRG 237
LS+DE+ ++ E + +++ +K E + RGR RG
Sbjct: 182 LGRVTLSLDEVVAAIYSKELELGSNKKS---IKGQAEGLFVKEKTETRGRTEQRGNNNNN 238
Query: 238 RGRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMAYVEPHQTKKQEV 297
+ +S ++ C+ C E + E L + + ++
Sbjct: 239 KKSRSKSRSKKGCWICG------------ESSNGSSNYSEANGLYVSEALSSTDIHLEDE 286
Query: 298 WYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLN-GITQVISDV 356
W +D+GCS HM +EWF DL ED +V++GN T V G+IR++ G+ +++V
Sbjct: 287 WVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNV 346
Query: 357 YYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPK 416
YIPE+ NLLS+G ++ G + +++GT + ++ T ++ L +
Sbjct: 347 RYIPEMDRNLLSLGTFEKSGYSFKLENGTLSII--AGDSVLLTVRRCYTLYLLQWRPVTE 404
Query: 417 RSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKI--CTTCLTG 474
S+ + Q + + H R GH++ K + L K GL + K+ C C+ G
Sbjct: 405 ESLSVVKR---QDDTILWHRRLGHMSQKNMDLLLKK----GLLDKKKVSKLETCEDCIYG 457
Query: 475 KQHREPVPKRSLWRASKQLQLVHSDICG-PIKPSWNSDKRYILSFIDDHTRKTWVYFLHE 533
K R + ++L+ VHSD+ G P P +Y +SFIDD+TRK +YFL
Sbjct: 458 KAKRIGF-NLAQHDTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKT 516
Query: 534 KSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*Q 593
K EAF KF E+ VE + I LRTD EF + FDEFC +GI T YTP Q
Sbjct: 517 KDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQ 576
Query: 594 NGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGE 653
NGVAER NRT+M VRSML++ +PK FW+EA + N+ P A+ + P++ WSG+
Sbjct: 577 NGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGK 636
Query: 654 KPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKD 713
P+ Y R F C+A VH D KL+ ++KK + +G K +++++ KK +VS++
Sbjct: 637 SPIYSYLRRFGCIAFVHTDD---GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRN 693
Query: 714 VVFEEEESW-------DWGRIEEE------IKLD-----ILECGEEDQNEEENGRTDLNN 755
V+F+E S+ D + E E + LD ++ G +D E + +
Sbjct: 694 VIFQENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEAQSPFNPSP 753
Query: 756 LSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAMM 815
++ + S + + P+S +LV R R R P F D + L E L
Sbjct: 754 ATTQTYSEGVNSETDIIQSPLS---YQLVRDRDRRTIRAPVRFDD---EDYLAEALYTTE 807
Query: 816 MVTENDPVSFGEAVKN---KKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTK 872
E +P + EA ++ KW+ AM+ E+ES +N +W + P+ K IG +W++K K
Sbjct: 808 DSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFK 867
Query: 873 LNEDGDVE-KFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDV 931
L G E +FKARLVAKGYAQR +DY E+FAPV + +IR+++ + AQ E+ QLDV
Sbjct: 868 LGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDV 927
Query: 932 KSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDF 991
K+AFLHGELKE++++ P+G+ +ED+V L K+LYGLKQA + W + AY F
Sbjct: 928 KTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGF 987
Query: 992 ERCPSEHILFTK--SKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMK 1049
R + + K S G R+ ++ LYVDD++ ++ + K + FDM DLG K
Sbjct: 988 IRSLYDSCAYIKELSDGSRVYLL-LYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAK 1046
Query: 1050 YFLGVEV--KQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKL------SKDEG 1101
LG+E+ + + +++ Y +L ++M +S V P K+ +++
Sbjct: 1047 RILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQEQD 1106
Query: 1102 GVRVDETLFKQVVGSLMYLTV-TRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTT 1160
+ + VGS+MY + TRPDL Y V +ISR+MS P HWL K +LRY+KG+
Sbjct: 1107 EDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSL 1166
Query: 1161 DLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTT 1220
+ YK+ S+ K++ + D+D+A D RRS + VF LG +SW S +Q VVALSTT
Sbjct: 1167 GTKLQYKR-SSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTT 1225
Query: 1221 EAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVR 1280
EAEY++ + VW+ +L++ G E+K S EI CD+ I LSKN V H ++KHIDVR
Sbjct: 1226 EAEYMSLTEAVKEAVWMKGLLKEFGYEQK-SVEIFCDSQSAIALSKNNVHHERTKHIDVR 1284
Query: 1281 FHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
+ ++RD++ +G + +++ ADI TK + + +F+ +L V
Sbjct: 1285 YQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKFQAALTLLQV 1330
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 606 bits (1562), Expect = e-173
Identities = 406/1373 (29%), Positives = 674/1373 (48%), Gaps = 94/1373 (6%)
Query: 16 DGHYDYWSMTMENFLRSKEMWSLVDEGIPV-----LETGTTPASEEQMKAVEEAKLKDLK 70
D +Y W E+ L S+++ V+ + L SEE E D
Sbjct: 23 DSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESWFCTDQL 82
Query: 71 VKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEG 130
V+++LF + E+L + + TS++IW S+ + ++ SS + L R+ LL+ KE
Sbjct: 83 VRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSL---RQNLQLLSKKE- 138
Query: 131 EKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES-NDLSILSI 189
+ + + + + S G+ ++ S + L L ++ + I+ S + L +
Sbjct: 139 KPFSVYCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDPITTVIQSSLSKLPTPTF 198
Query: 190 DELHGSLLVHEQRMQGHQEEEHVLK------------VAQEDRSSRGRGRGAPRGGRG-- 235
+++ + + ++Q ++E V Q + + +GRGR GRG
Sbjct: 199 NDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQYNPNQKGRGRSGQNKGRGGY 258
Query: 236 --RGRG-RQSLNKEVIE-----CYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMAYV 287
RGRG Q + + C C R GH +C + AE++ L +
Sbjct: 259 STRGRGFSQHQSSPQVSGPRPVCQICGRTGHTALKCYNRFDNNYQAEIQAFSTLRVS--- 315
Query: 288 EPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEE-DFSRTVKLGNDTRMAVVAKGSIRMQL 346
T K+ W+ DS + H+ + E + V +G+ T + + GS ++
Sbjct: 316 --DDTGKE--WHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKS 371
Query: 347 NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIM 406
+ +++V +P ++ +LLS+ +L + D C V+ V + + ++
Sbjct: 372 SNGKIPLNEVLVVPNIQKSLLSVSKLCD--------DYPCGVYFDANKVCIIDLQTQKVV 423
Query: 407 FFLLASMAPKRS----------VCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVV 456
+ P+R+ V L + + H R GH N K L+ L + K +
Sbjct: 424 -----TTGPRRNGLYVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQ 478
Query: 457 GLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYIL 516
S SP +C C GK R P S R L +H D+ GP N +Y
Sbjct: 479 INKSRTSP--VCEPCQMGKSSRLPF-LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYA 535
Query: 517 SFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFC 576
F+DD++R +W Y LH KSE F ++ VE ++ I ++D EF SN+
Sbjct: 536 IFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHL 595
Query: 577 RSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRC 636
GI+ +++ YTP QNG+AERK+R ++ + SML P+ FW E+ +I NR
Sbjct: 596 SEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRL 655
Query: 637 PIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESK 696
P ++N +P EA GEKP R+F + + ++K D +S +CVFLG + + K
Sbjct: 656 PSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYK 715
Query: 697 AWRLYVPVSKKIIVSKDVVFEEEE---SWDWGRIEEEIKLDILECGEEDQNEEENGRT-- 751
+R + P + K+ +S++V+F E E + + + +L+ + ++ E +
Sbjct: 716 GYRCFYPPTGKVYISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAP 775
Query: 752 --------DLNNLSSNSSSSSNSLPESLPN-----EPISNTPEELVEGRVVRERRVPSWF 798
DLN + + + + PE N E ++ EE+ + E+ + S
Sbjct: 776 VQLFSKPIDLNTYAGSQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQ---EQVINSHA 832
Query: 799 ADYETREGLEENLNAMMMVTEN----DPVSFGEAVKNKKWRDAMSAEIESIERNQSWELT 854
++ G+++ ++T +P + A+K+ W +A+ EI + +W L
Sbjct: 833 MTTRSKAGIQKPNTRYALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLV 892
Query: 855 VLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRV 914
+ + KWVFKTKL+ DG ++K KARLVAKG+ Q VDY E F+PV R TIR+
Sbjct: 893 PPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRL 952
Query: 915 ILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQA 974
+L+V+ W + QLDV +AFLHGEL+E VF+ QP GFI + V RL KA+YGLKQA
Sbjct: 953 VLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQA 1012
Query: 975 LRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKS 1034
RAW+ + + F S+ LF + G+IL + LYVDD++ TG+D+ + ++
Sbjct: 1013 PRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQ 1072
Query: 1035 SMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGT 1094
++ F M DLG +YFLG++++ +G+F+ YA D+L + M D N + PT
Sbjct: 1073 ALKNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPM--PTPLPQ 1130
Query: 1095 KLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILR 1154
+L + + T F+ + G L YLT+TRPD+ + V+ I + M SPT S + KRILR
Sbjct: 1131 QLDNLNSELFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILR 1190
Query: 1155 YLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYV 1214
Y+KGT +G+ K+ S + L A+ DSD+AG + RRST+ F +LGS ++SWS+K+Q
Sbjct: 1191 YIKGTIGMGLPIKR-NSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPT 1249
Query: 1215 VALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKS 1274
V+ S+TEAEY A A + W+ +L +G+ + T++ CDN + LS NP H +S
Sbjct: 1250 VSNSSTEAEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRS 1309
Query: 1275 KHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVT 1327
KH D +H++R+ V G+I+ + ++ Q+AD+ TK + F LR LGV+
Sbjct: 1310 KHFDTDYHYIREQVALGLIETQHISATFQLADVFTKSLPRRAFVDLRSKLGVS 1362
>At4g03810 putative retrotransposon protein
Length = 964
Score = 554 bits (1427), Expect = e-157
Identities = 339/991 (34%), Positives = 527/991 (52%), Gaps = 53/991 (5%)
Query: 353 ISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLAS 412
+ + YY+P + N++S+ L +G I++ C + + N + L S
Sbjct: 5 LKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRD--DMFYGSAPLDNGLHVLNQS 62
Query: 413 MAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCL 472
M + ++ + HCR GH+N K ++ L H ++ ES E C +CL
Sbjct: 63 MPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKL-HSDGLLNSFDYESYET-CESCL 120
Query: 473 TGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLH 532
GK + P S RAS L L+H+D+CGP+ S + +Y ++F DD +R +VY +
Sbjct: 121 LGKMTKAPFTGHSE-RASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMK 179
Query: 533 EKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP* 592
KS++F FKE++ V+ + G I LR+DR E+ S F + R GI QLT TP
Sbjct: 180 HKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQ 239
Query: 593 QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSG 652
NGV+ER+NRT++++VRSM++ +P FW A+ + NRCP +VE KTP E W+G
Sbjct: 240 WNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVE-KTPYEIWTG 298
Query: 653 EKPVVHYFRIFECVAHVH--VPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIV 710
+ P + + +I+ C ++ + D KL KS KC F+G E+K + Y P K+ V
Sbjct: 299 KVPNLSFLKIWGCESYAKRLITD----KLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFV 354
Query: 711 SKDVVFEEEESWDWGRIEEEIKLDILECGEED-QNEEENGRTDLNNLSSNSSSSSNSLPE 769
++ F E E G ++ L+ + + D +E + DL +
Sbjct: 355 VRNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPTSQEEHQLDLRRVV------------ 402
Query: 770 SLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAV 829
EPI PE R R R P F D+ + +A+ M+ ++P S+ EA+
Sbjct: 403 ----EPILVEPEVR---RSERSRHEPDRFRDWVMDD------HALFMIESDEPTSYEEAL 449
Query: 830 K---NKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARL 886
+ KW +A +E+ES+ +N+ W L LP GVKPI KW+FK K++ DG+++ +KA L
Sbjct: 450 MGPDSDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGL 509
Query: 887 VAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFV 946
VAKGY Q H +DY E ++PVA L +IR++L AA + +E++Q+DVK+AFL+G L+E V++
Sbjct: 510 VAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYM 569
Query: 947 QQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKG 1006
QP+GF KV +L +++YGLKQA R+W R DF R E ++ K+ G
Sbjct: 570 TQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSG 629
Query: 1007 GRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEV--KQC*DGIF 1064
+ + LYVDD++ GND + K+ + F M D+G+ Y LG+ + + I
Sbjct: 630 SAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIG 689
Query: 1065 IC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSK------DEGGVRVDETLFKQVVGSLM 1118
+ Y VL RF+M DS P G LSK + R+ + + +GS+M
Sbjct: 690 LSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIM 749
Query: 1119 Y-LTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMA 1177
Y + TRPD+ +S+ SR+ S P SHW+ + I +YL+ T D + Y G + +
Sbjct: 750 YAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVY-GGSEELVVSG 808
Query: 1178 FPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWL 1237
+ D+ + D DD RS S F F L G VSW S KQ VA STTEAEYIAA+ A + VW+
Sbjct: 809 YTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWI 868
Query: 1238 IRVLEKIGVEEKTS--TEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKL 1295
+ + ++GV S ++ CDN+ I +K P H KSKHI R+H +R++++ G +K+
Sbjct: 869 RKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKI 928
Query: 1296 SYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
S ++ +AD TKP+ + E +G+
Sbjct: 929 SRVSTDANVADHFTKPLPQPKHESHTTAIGI 959
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 547 bits (1409), Expect = e-155
Identities = 332/1065 (31%), Positives = 563/1065 (52%), Gaps = 67/1065 (6%)
Query: 290 HQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGI 349
H + + W +DSG ++H+ +++ F L+ V L + + G++ + + I
Sbjct: 434 HNSLSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDII 493
Query: 350 TQVISDVYYIPELKNNLLSIGQLQ-EKGLAILIQDGTCKVFHPMRGVIM-QTNMSGNIMF 407
Q +V +IPE + NL+SI L + G ++ C++ +G+ + + GN+
Sbjct: 494 LQ---NVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNL-- 548
Query: 408 FLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKI 467
++L + +P SV AV + + H R GH + L +LS V+G ++ +
Sbjct: 549 YVLDTQSPAISV----NAVV--DVSVWHKRLGHPSFSRLDSLSE---VLGTTRHKNKKSA 599
Query: 468 -CTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKT 526
C C KQ + P + + +L+H D+ GP +Y L+ +DDH+R T
Sbjct: 600 YCHVCHLAKQKKLSFPSANNI-CNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRAT 658
Query: 527 WVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLT 586
W+Y L KS+ F + VE + + +R+D E F EF +++GI +
Sbjct: 659 WIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHS 715
Query: 587 TTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTP 646
TP QN V ERK++ I+NV R+++ + + +W + V V + NR P + NKTP
Sbjct: 716 CPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTP 775
Query: 647 EEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSK 706
E +G+ P + F C+ + ++R K +S+ CVFLG K ++L S
Sbjct: 776 FEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESN 835
Query: 707 KIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNS 766
+ +S++V F EE L L ++ + T ++ LSS NS
Sbjct: 836 VVHISRNVEFHEE-------------LFPLASSQQSATTASDVFTPMDPLSSG-----NS 877
Query: 767 LPESLPNEPISNTPEELVEGRVVRERRVPSWFADY-------ETREGLEENLN------A 813
+ LP+ IS P + R R + P+ DY + + +L+ +
Sbjct: 878 ITSHLPSPQIS--PSTQISKR--RITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPS 933
Query: 814 MMMVTEND-----PVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWV 868
M+ N P S+ EA +K+W A+ EI ++ER +WE+T LP G K +G KWV
Sbjct: 934 HMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWV 993
Query: 869 FKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQ 928
F K + DG +E+FKAR+VAKGY Q+ +DYTE F+PVA++ T++++L+V+A W + Q
Sbjct: 994 FTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQ 1053
Query: 929 LDVKSAFLHGELKEEVFVQQPKGFIR-KGEE---DKVYRLKKALYGLKQALRAWYSRIEA 984
LD+ +AFL+G+L+E ++++ P G+ KG + V RLKK++YGLKQA R W+ +
Sbjct: 1054 LDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSN 1113
Query: 985 YFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSD 1044
+ FE+ +H LF + G +++ +YVDD++ ++ F + +
Sbjct: 1114 SLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRE 1173
Query: 1045 LGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVR 1104
LG +KYFLG+EV + +GI + R+YA ++L DM D P P +LSK++G +
Sbjct: 1174 LGPLKYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLL 1233
Query: 1105 VDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGI 1164
D+ +++++VG LMYLT+TRPD+ + V+ + +F S+P +H A ++L+Y+KGT G+
Sbjct: 1234 EDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGL 1293
Query: 1165 FYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEY 1224
FY ++ L + D+D+ D RRST+ F +GS ++SW SKKQ V+ S+ EAEY
Sbjct: 1294 FY-SAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEY 1352
Query: 1225 IAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFL 1284
A AL +C+ WL +L + V + D++ + ++ NPVFH ++KHI++ H +
Sbjct: 1353 RALALASCEMAWLSTLLLALRVHSGVPI-LYSDSTAAVYIATNPVFHERTKHIEIDCHTV 1411
Query: 1285 RDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEV 1329
R+ +++G +KL + ++DQ+ADI+TKP+ QF L + + +
Sbjct: 1412 REKLDNGQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNI 1456
>At1g70010 hypothetical protein
Length = 1315
Score = 528 bits (1359), Expect = e-149
Identities = 326/1009 (32%), Positives = 533/1009 (52%), Gaps = 52/1009 (5%)
Query: 352 VISDVYYIPELKNNLLSIGQLQEK-GLAILIQDGTCKVFHPMRGVIMQTNMS-GNIMFFL 409
+++DV +IP+ K NLLS+ L + G I + +C + R +++ N+
Sbjct: 324 ILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVD 383
Query: 410 LASMA-PKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKI- 467
L S++ P + +V+ + + H R GH + + L+ +S ++ P ++
Sbjct: 384 LDSLSHPGTDSSITVASVTSHD--LWHKRLGHPSVQKLQPMSS---LLSFPKQKNNTDFH 438
Query: 468 CTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTW 527
C C KQ P + ++S+ L+H D GP + RY L+ +DD++R TW
Sbjct: 439 CRVCHISKQKHLPFVSHNN-KSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATW 497
Query: 528 VYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTT 587
VY L KS+ + VE + I +R+D E F +F S+GI +
Sbjct: 498 VYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSKGIVPYHSC 554
Query: 588 TYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPE 647
TP QN V ERK++ I+NV RS+ + +P +W + + V++ NR P +E+K P
Sbjct: 555 PETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPF 614
Query: 648 EAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKK 707
E + P + ++F C+ + + R K ++K C F+G K ++L +
Sbjct: 615 EVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHS 674
Query: 708 IIVSKDVVFEEEESWDWGRIEEEIKLDILECGEEDQN--EEENGRTDLNNLSSN--SSSS 763
IIVS+ VVF EE G + +E+QN + N + SS+ + S
Sbjct: 675 IIVSRHVVFHEELFPFLGS----------DLSQEEQNFFPDLNPTPPMQRQSSDHVNPSD 724
Query: 764 SNSLPESLPN-EPISNTPEELVEGRVVRERRVPSWFADY-----------ETREGLE-EN 810
S+S E LP+ P +N PE V+ R+ + P++ DY E R+ L +
Sbjct: 725 SSSSVEILPSANPTNNVPEPSVQTSH-RKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDR 783
Query: 811 LNAMMMV------TENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIG 864
+N + +P ++ EA K + WRDAM AE + +E +WE+ LP + IG
Sbjct: 784 INDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIG 843
Query: 865 VKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSW 924
+W+FK K N DG VE++KARLVA+GY Q+ +DY E F+PVA+L++++++L VAA+F
Sbjct: 844 CRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKL 903
Query: 925 EVFQLDVKSAFLHGELKEEVFVQQPKGFI-RKGEE---DKVYRLKKALYGLKQALRAWYS 980
+ QLD+ +AFL+G+L EE++++ P+G+ R+G+ + V RLKK+LYGLKQA R WY
Sbjct: 904 SLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYL 963
Query: 981 RIEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEF 1040
+ + + F + +H F K G L V +Y+DD+I N+ D KS M F
Sbjct: 964 KFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFF 1023
Query: 1041 DMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDE 1100
+ DLG++KYFLG+E+ + GI I R+YA D+L P P + D
Sbjct: 1024 KLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDS 1083
Query: 1101 GGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTT 1160
GG V+ +++++G LMYL +TRPD+ + V+ +++F +P +H A +IL+Y+KGT
Sbjct: 1084 GGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTI 1143
Query: 1161 DLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTT 1220
G+FY S ++L + ++DY D RRSTS + LG ++ W S+KQ VV+ S+
Sbjct: 1144 GQGLFY-SATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSA 1202
Query: 1221 EAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVR 1280
EAEY + ++ + VWL L+++ V T + CDN I ++ N VFH ++KHI+
Sbjct: 1203 EAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESD 1262
Query: 1281 FHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEV 1329
H +R+ + G+ +L + N++ QIAD TKP+ F +L +G+ +
Sbjct: 1263 CHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGLLNI 1311
Score = 32.0 bits (71), Expect = 2.4
Identities = 16/54 (29%), Positives = 31/54 (56%), Gaps = 4/54 (7%)
Query: 71 VKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVK----REQLQVMRR 120
VK++L ++ +EI +IL T+ IW + ++H SS + R+Q+ +R+
Sbjct: 38 VKSWLLNSVSKEIYTSILYFPTAAAIWKDLYTRFHKSSLPRLYKLRQQIHSLRQ 91
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,525,316
Number of Sequences: 26719
Number of extensions: 1384420
Number of successful extensions: 5995
Number of sequences better than 10.0: 238
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 4837
Number of HSP's gapped (non-prelim): 606
length of query: 1332
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1221
effective length of database: 8,352,787
effective search space: 10198752927
effective search space used: 10198752927
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0346.12