BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0336.1
(1182 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g44510 polyprotein, putative 625 e-179
At4g16870 retrotransposon like protein 614 e-175
At1g59265 polyprotein, putative 573 e-163
At4g02960 putative polyprotein of LTR transposon 573 e-163
At1g58889 polyprotein, putative 572 e-163
At1g53810 560 e-159
At1g60020 hypothetical protein 547 e-155
At1g31210 putative reverse transcriptase 538 e-153
At4g28900 putative protein 520 e-147
At4g10690 retrotransposon like protein 508 e-144
At4g27210 putative protein 504 e-142
At2g14930 pseudogene 465 e-131
At1g36620 hypothetical protein 445 e-125
At2g20460 putative retroelement pol polyprotein 442 e-124
At2g16000 putative retroelement pol polyprotein 442 e-124
At1g57640 412 e-115
At4g14460 retrovirus-related like polyprotein 407 e-113
At2g16670 putative retroelement pol polyprotein 407 e-113
At1g70010 hypothetical protein 402 e-112
At1g26990 polyprotein, putative 360 3e-99
>At1g44510 polyprotein, putative
Length = 1459
Score = 625 bits (1613), Expect = e-179
Identities = 428/1233 (34%), Positives = 614/1233 (49%), Gaps = 207/1233 (16%)
Query: 34 KLSDRNFLLWKQQVEPIIKAHNLH-VLVQDPEIPPRFVTERDRVAGTLNPAYSVWESKDQ 92
KL+ N+L+W Q+ ++ ++L L IPP T V+ NP++++W+ +D+
Sbjct: 32 KLTSTNYLMWSIQIHALLDGYDLAGYLDNSVVIPPETTTINSVVSA--NPSFTLWKRQDK 89
Query: 93 YLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRSETLGNRTI 152
+ S L ++S V S + +S Q+W +++ + + QLR +++ T G +TI
Sbjct: 90 LIFSALIGAISPAVQSLVSRATNSSQIWSTLNNTYAKPSYGHIKQLRQQIQRLTKGTKTI 149
Query: 153 SEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEHSIDELEAL 212
E++ + +D L +G P+ E ++ IL+GLP +Y+ ++ D++E
Sbjct: 150 DEYVQSHTTRLDQLAILGKPMEHEEQVEHILKGLPEEYKTVV------------DQIE-- 195
Query: 213 LLAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGESQDSDPMDSY 272
GK TP+ T ++ L N ++ S S+S S Q + ++
Sbjct: 196 --------GKDNTPTIT---EIHERLINHESKLLSDEVPPSSSFPMSANAVQQRNFNNNC 244
Query: 273 DSSGHGRGSSRGRGARGRGRGRSSIQCQLCYKFGHDVWQCYHRFNPNFVPQKPPQNSPQN 332
+ + H + R +G + H N N
Sbjct: 245 NQNQH----------KNRYQGNT------------------HNNNTNT------------ 264
Query: 333 SQWNSSPQWHSNSQWSSTPQWNSQWSAPVSSPWQHSSSQWPPRYPPAPSGYAPMASSPGV 392
NS P ++ S + + + + S HS+ R P + P +SS
Sbjct: 265 ---NSQPSTYNKSGQRTFKPYLGK--CQICSVQGHSAR----RCPQLQAMQLPASSSAHS 315
Query: 393 PYRGPAPSPMGYAQAHVAFQTSTSTPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAG 452
P+ P +A++A +P A +P W DSGA+HH+TS+ + P+ G
Sbjct: 316 PFTPWQP------RANLAI----GSPYAANP---WLLDSGATHHITSDLNALSLHQPYNG 362
Query: 453 QDQLFVGNGQGLPISGIGSSTLSS---GLVLNNLLHVPSITKNLVSVSKFARDNGVFFEF 509
+ + + +G GL I GS+ L S L L+ +L+VP I KNL+SV + N V EF
Sbjct: 363 GEYVMIADGTGLTIKQTGSTFLPSQNRDLALHKVLYVPDIRKNLISVYRLCNTNQVSVEF 422
Query: 510 HPYYCCVKSQASSKVLLQGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGH 569
P VK + +LLQG D LY++ PV +P + S S
Sbjct: 423 FPASFQVKDLNTGTLLLQGRT-KDDLYEW--------------PVTNPPATALFTSPSPK 467
Query: 570 APVEQPSVVSSVCTANLWHFRLGHPSLNVLRKALQFCKIPVS----NKMDVDFCKACVMG 625
T + WH RLGHPS ++L L +PVS NK C C++
Sbjct: 468 T------------TLSSWHSRLGHPSASILNTLLSKFSLPVSVASSNKTS---CSDCLIN 512
Query: 626 KSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKS 685
KSH+LP + S+ +SPLE +++D+W SP S Y YY+ +D Y+RYTW+Y L+ KS
Sbjct: 513 KSHKLPFATSSIHSSSPLEYIFTDVW-TSPIISHDNYKYYLVLVDHYTRYTWLYPLQQKS 571
Query: 686 EAISAFHQFKASSELQLNAKIKALQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVV 745
+ + F FKA E + AKI+ L +D GGEF +FL GI H PHT NG+
Sbjct: 572 QVKATFIAFKALVENRFQAKIRTLYSDNGGEFIALRDFLVSNGISHLTSPPHTPEHNGLS 631
Query: 746 ERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDY 805
ERKHRHIV+ GL+LL AS+P YW +AF+TAVYLINR+PT L P KLF P+Y
Sbjct: 632 ERKHRHIVETGLTLLTQASVPREYWTYAFATAVYLINRMPTPVLCLQSPFQKLFGSSPNY 691
Query: 806 TFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFD 864
L+VFGC CFP +RPY +KL+ RS+ CVFLGYS + Y CL + R+Y S+ V+FD
Sbjct: 692 QRLRVFGCLCFPWLRPYTRNKLEERSKRCVFLGYSLTQTAYLCLDVDNNRLYTSRHVMFD 751
Query: 865 EHTFPYPKLFAQNSNS-----------------------------PSLSPAVVLP----- 890
E T+P+ + S S P+ SP P
Sbjct: 752 ESTYPFAASIREQSQSSLVTPPESSSSSSPANSGFPCSVLRLQSPPASSPETPSPPQQQN 811
Query: 891 ---------SLPSVEHFSQ---------PAIAQPSSSLP--------------SPFL-PS 917
P+ H SQ P+++ + P SPF+ P
Sbjct: 812 DSPVSPRQTGSPTPSHHSQVRDSTLSPSPSVSNSEPTAPHENGPEPEAQSNPNSPFIGPL 871
Query: 918 PIASSDQNPSSTSPASAPATSEASAEIPSQVTIPTSSGQVSAPSSSGNVHPMITRSKNGI 977
P + + NPSS+ S +A P+Q TI +S S P N H M TRSKN I
Sbjct: 872 PNPNPETNPSSSIEQRPVDKSTTTALPPNQTTIAATSNSRSQPPK--NNHQMKTRSKNNI 929
Query: 978 VQPRVQPTLLTVQL------EPTTVKQALAHPQWLQAMQAEFDALQKNKTWSLVPLPPGR 1031
+P+ + T LTV L EP TV QAL +W AM EFDA Q+N TW LVP P +
Sbjct: 930 TKPKTK-TSLTVALTQPHLSEPNTVTQALKDKKWRFAMSDEFDAQQRNHTWDLVPPNPTQ 988
Query: 1032 EAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYTETFSPVIKPVTIRVILTLAL 1091
+GC+WVF++K+ P+G ++KYKARLVAKGF+QQ G DY ETFSPVIK TIRV+L +A+
Sbjct: 989 HLVGCRWVFKLKYLPNGLIDKYKARLVAKGFNQQYGVDYAETFSPVIKATTIRVVLDVAV 1048
Query: 1092 TNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGF-EHDK-KLVCRLHKALYGLKQAPRAWFE 1149
+W ++QLDVNNAFL G L EEVYM QP GF + D+ VCRL KA+YGLKQAPRAW+
Sbjct: 1049 KKNWPLKQLDVNNAFLQGTLTEEVYMAQPPGFVDKDRPSHVCRLRKAIYGLKQAPRAWYM 1108
Query: 1150 KLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
+L L+ GFV S D SLF+ S ++Y+L
Sbjct: 1109 ELKQHLLNIGFVNSLADTSLFIYSHGTTLLYLL 1141
>At4g16870 retrotransposon like protein
Length = 1474
Score = 614 bits (1583), Expect = e-175
Identities = 427/1253 (34%), Positives = 607/1253 (48%), Gaps = 233/1253 (18%)
Query: 34 KLSDRNFLLWKQQVEPIIKAHNLHVLVQDP-EIPPRFVTERDRVAGTLNPAYSVWESKDQ 92
KL+ N+L+W Q+ ++ + L + E P +T + V+ NP Y++W+ +D+
Sbjct: 33 KLTSNNYLMWSLQIHALLDGYELAGHLDGSIETPAPTLTTNNVVSA--NPQYTLWKRQDR 90
Query: 93 YLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRSETLGNRTI 152
+ S L ++S PV + + Q+W+ + + + + QLRT+++ G +TI
Sbjct: 91 LIFSALIGAISPPVQPLVSRATKASQIWKTLTNTYAKSSYDHIKQLRTQIKQLKKGTKTI 150
Query: 153 SEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEHSIDELEAL 212
E++L +++D L +G P+ E ++ IL+GLP DY+ ++ D++E
Sbjct: 151 DEYVLSHTTLLDQLAILGKPMEHEEQVERILEGLPEDYKTVV------------DQIE-- 196
Query: 213 LLAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGESQDSDPMDSY 272
GK TPS T ++ L N + S + S+S S +Q
Sbjct: 197 --------GKDNTPSIT---EIHERLINHEAKLLSTAALSSSSLPMSANVAQ-------- 237
Query: 273 DSSGHGRGSSRGRGARGRGRGRSSIQCQLCYKFGHDVWQCYHRFNPNFVPQKPPQNSPQN 332
Q +H N N K N Q
Sbjct: 238 --------------------------------------QRHHNNNRNNNQNK---NRTQG 256
Query: 333 SQWNSSPQWHSNSQWSSTPQWNSQWSAPVSSPWQHSSSQWPPRYPPAPSGYAPMASSPGV 392
+ + ++ Q +N++ P + + HS+ + P PS + ++S
Sbjct: 257 NTYTNNWQPSANNKSGQRPFKPYLGKCQICNVQGHSARRCPQLQAMQPSSSS--SASTFT 314
Query: 393 PYRGPAPSPMGYAQAHVAFQTSTSTPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAG 452
P++ A MG A A +W DSGA+HH+TS+ + P+ G
Sbjct: 315 PWQPRANLAMG----------------APYTANNWLLDSGATHHITSDLNALALHQPYNG 358
Query: 453 QDQLFVGNGQGLPISGIGSSTLSSG---LVLNNLLHVPSITKNLVSVSKFARDNGVFFEF 509
D + + +G L I+ GS+ L S L LN +L+VP I KNLVSV + N V EF
Sbjct: 359 DD-VMIADGTSLKITKTGSTFLPSNARDLTLNKVLYVPDIQKNLVSVYRLCNTNQVSVEF 417
Query: 510 HPYYCCVKSQASSKVLLQGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGH 569
P VK + +LLQG D LY++ PV +P + + S
Sbjct: 418 FPASFQVKDLNTGTLLLQGRT-KDELYEW--------------PVTNPKATALFTTPSPK 462
Query: 570 APVEQPSVVSSVCTANLWHFRLGHPSLNVLRKALQFCKIPVS----NKMDVDFCKACVMG 625
T + WH RLGHPS ++L + +PVS NK+ C C +
Sbjct: 463 T------------TLSSWHSRLGHPSSSILNTLISKFSLPVSVSASNKLA---CSDCFIN 507
Query: 626 KSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKS 685
KSH+LP S+S+ + TSPLE ++SD+W SP S Y YY+ +D ++RYTW+Y L+ KS
Sbjct: 508 KSHKLPFSISSIKSTSPLEYIFSDVW-MSPILSPDNYKYYLVLVDHHTRYTWLYPLQQKS 566
Query: 686 EAISAFHQFKASSELQLNAKIKALQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVV 745
+ S F FKA E + AKI+ L +D GGEF FL GI H PHT NG+
Sbjct: 567 QVKSTFIAFKALVENRFQAKIRTLYSDNGGEFIALREFLVSNGISHLTSPPHTPEHNGLS 626
Query: 746 ERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDY 805
ERKHRHIV+ GL+LL AS+P YW +AF+ AVYLINR+PT L + P KLF P+Y
Sbjct: 627 ERKHRHIVETGLTLLTQASVPREYWPYAFAAAVYLINRMPTPVLSMESPFQKLFGSKPNY 686
Query: 806 TFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFD 864
L+VFGC CFP +RPY +KL+ RS+ CVFLGYS + Y C R+Y S+ V+FD
Sbjct: 687 ERLRVFGCLCFPWLRPYTHNKLEERSRRCVFLGYSLTQTAYLCFDVEHKRLYTSRHVVFD 746
Query: 865 EHTFPYPKLFAQNS-------------NSPSLSPAVVLPSLPS----VEHFSQPAIAQPS 907
E +FP+ L +QNS +P LS + VLPS S V H QP + P+
Sbjct: 747 EASFPFSNLTSQNSLPTVTFEQSSSPLVTPILSSSSVLPSCLSSPCTVLHQQQPPVTTPN 806
Query: 908 S-------SLPSPFLP----------------SPIASS---------------------- 922
S + P+P P SP+ SS
Sbjct: 807 SPHSSQPTTSPAPLSPHRSTTMDFQVPQVRSSSPLLSSSSSLNSEPTAPNENGPEPEAQS 866
Query: 923 ---------------------DQNPS-----STSPASAPATSEASAEIPSQVTIPTSSGQ 956
++NP+ + +P P + P++ T+ +S Q
Sbjct: 867 PPIGPLSNPTHEAFIGPLPNPNRNPTNEIEPTPAPHPKPVKPTTTTTTPNRTTVSDASHQ 926
Query: 957 VSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTV-----QLEPTTVKQALAHPQWLQAMQA 1011
+AP N H M TR+KN I +P + +L EPT V QAL +W AM
Sbjct: 927 PTAPQQ--NQHNMKTRAKNNIKKPNTKFSLTATLPNRSPSEPTNVTQALKDKKWRFAMSD 984
Query: 1012 EFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYT 1071
EFDA Q+N TW LVP + +GCKWVF++K+ P+G ++KYKARLVAKGF+QQ G DY
Sbjct: 985 EFDAQQRNHTWDLVP-HESQLLVGCKWVFKLKYLPNGAIDKYKARLVAKGFNQQYGVDYA 1043
Query: 1072 ETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGF-EHDKKL- 1129
ETFSPVIK TIR++L +A+ W I+QLDVNNAFL G L EEVYM QP GF + D+
Sbjct: 1044 ETFSPVIKSTTIRLVLDVAVKKDWEIKQLDVNNAFLQGTLTEEVYMAQPPGFIDKDRPTH 1103
Query: 1130 VCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
VCRL KA+YGLKQAPRAW+ +L L GFV S D SLF+ +YVL
Sbjct: 1104 VCRLRKAIYGLKQAPRAWYMELKQHLFNIGFVNSLSDASLFIYCHGTTFVYVL 1156
>At1g59265 polyprotein, putative
Length = 1466
Score = 573 bits (1478), Expect = e-163
Identities = 366/958 (38%), Positives = 500/958 (51%), Gaps = 161/958 (16%)
Query: 342 HSNSQWSSTPQWNSQWSAPVSSPWQHSSSQWPPRYPPAPSGYAPMASSPGVPYRGPAPSP 401
++N+ + +++++ + S PWQ SS+ + P ++ PY G
Sbjct: 235 NNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN------------NNQSKPYLGKCQ-- 280
Query: 402 MGYAQAHVA--------FQTSTSTPQATSPAQSWYP-----------------DSGASHH 436
+ Q H A F +S ++ Q SP W P DSGA+HH
Sbjct: 281 ICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHH 340
Query: 437 VTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTLSSG---LVLNNLLHVPSITKNL 493
+TS+ N+ P+ G D + V +G +PIS GS++LS+ L L+N+L+VP+I KNL
Sbjct: 341 ITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNL 400
Query: 494 VSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKFHEFKLSHLPVSLSAP 553
+SV + NGV EF P VK + LLQG D LY++ P++ S
Sbjct: 401 ISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKT-KDELYEW--------PIASS-- 449
Query: 554 VQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHPSLNVLRKALQFCKIPVSNK 613
PVS+ S SS T + WH RLGHP+ ++L + + V N
Sbjct: 450 --QPVSLFASPSSKA--------------THSSWHARLGHPAPSILNSVISNYSLSVLNP 493
Query: 614 MDVDF-CKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSSSGYLYYITFIDAY 672
C C++ KS+++P S ST T PLE +YSD+W SP S Y YY+ F+D +
Sbjct: 494 SHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHF 552
Query: 673 SRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWGGEFRVFPNFLKDFGIHHR 732
+RYTW+Y LK KS+ F FK E + +I +D GGEF + GI H
Sbjct: 553 TRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHL 612
Query: 733 LICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVYLINRLPTSSLQFD 792
PHT NG+ ERKHRHIV+ GL+LL+HASIP TYW +AF+ AVYLINRLPT LQ +
Sbjct: 613 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLE 672
Query: 793 IPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGYSPSHRGYKCL-AS 851
P KLF P+Y L+VFGC C+P +RPYN HKLD +S++CVFLGYS + Y CL
Sbjct: 673 SPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQ 732
Query: 852 SGRIYISKDVIFDEHTFPYPKLFA--------QNSNSPSLSPAVVLPS----LPSVEHFS 899
+ R+YIS+ V FDE+ FP+ A + +S SP LP+ LP+
Sbjct: 733 TSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSD 792
Query: 900 QPAIAQPSSSLPSPFLPSPIASSD------------------------------------ 923
A P SS +PF S ++SS+
Sbjct: 793 PHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQT 852
Query: 924 --------QNPSSTSPA------SAPATSEASAEIPSQVTIPTSSGQVSAPSS------- 962
NP++ SP+ S PA S +S+ PS T +SS P S
Sbjct: 853 HSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSS--PSPTTSASSSSTSPTPPSILIHPPP 910
Query: 963 ------------SGNVHPMITRSKNGIVQPRVQPTL---LTVQLEPTTVKQALAHPQWLQ 1007
N H M TR+K GI++P + +L L + EP T QAL +W
Sbjct: 911 PLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRN 970
Query: 1008 AMQAEFDALQKNKTWSLVPLPPGREAI-GCKWVFRVKHNPDGTLNKYKARLVAKGFHQQP 1066
AM +E +A N TW LVP PP I GC+W+F K+N DG+LN+YKARLVAKG++Q+P
Sbjct: 971 AMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRP 1030
Query: 1067 GFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGF-EH 1125
G DY ETFSPVIK +IR++L +A+ W I+QLDVNNAFL G L ++VYM QP GF +
Sbjct: 1031 GLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDK 1090
Query: 1126 DK-KLVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
D+ VC+L KALYGLKQAPRAW+ +L + L+ GFV S D SLFVL + ++Y+L
Sbjct: 1091 DRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYML 1148
Score = 97.4 bits (241), Expect = 4e-20
Identities = 68/298 (22%), Positives = 139/298 (45%), Gaps = 19/298 (6%)
Query: 34 KLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPRFVTERDRVAGTLNPAYSVWESKDQY 93
KL+ N+L+W +QV + + L + P D A +NP Y+ W+ +D+
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTD-AAPRVNPDYTRWKRQDKL 83
Query: 94 LLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRSETLGNRTIS 153
+ S + ++S V + + Q+WE + + N + TQLRT+L+ T G +TI
Sbjct: 84 IYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTID 143
Query: 154 EFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEHSIDELEALL 213
+++ + + D L +G P+ E ++ +L+ LP +Y+ +I I+ + ++ E+ L
Sbjct: 144 DYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERL 203
Query: 214 LAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGESQDSDPMDSYD 273
L E+++ ++V+ A P T ++AVS ++ + T + ++ D+ +
Sbjct: 204 LNHESKI-----------LAVSSATVIPIT--ANAVSHRNTTTTNNNNNGNRNNRYDNRN 250
Query: 274 SSGHGRGSSRGRGARGRGRGRSSI---QCQLCYKFGHDVWQC--YHRFNPNFVPQKPP 326
++ + + + +S +CQ+C GH +C F + Q+PP
Sbjct: 251 NNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPP 308
>At4g02960 putative polyprotein of LTR transposon
Length = 1456
Score = 573 bits (1476), Expect = e-163
Identities = 368/937 (39%), Positives = 483/937 (51%), Gaps = 155/937 (16%)
Query: 362 SSPWQHSSS--QWPPRYPPAPSGYAPMASSPGVPYRGPAPSPMGYAQAHVAFQTSTSTPQ 419
S+ WQ SSS + R P G + S G S Q H FQ++T+ Q
Sbjct: 234 SNSWQPSSSGSRSDNRQPKPYLGRCQICSVQG-------HSAKRCPQLH-QFQSTTNQQQ 285
Query: 420 ATSPAQSWYP-----------------DSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQ 462
+TSP W P DSGA+HH+TS+ N+ P+ G D + + +G
Sbjct: 286 STSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGS 345
Query: 463 GLPISGIGSSTL---SSGLVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQ 519
+PI+ GS++L S L LN +L+VP+I KNL+SV + N V EF P VK
Sbjct: 346 TIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDL 405
Query: 520 ASSKVLLQGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVS 579
+ LLQG D LY++ P++ S V S+ +
Sbjct: 406 NTGVPLLQGKT-KDELYEW--------PIASSQAV---------------------SMFA 435
Query: 580 SVC---TANLWHFRLGHPSLNVLRKALQFCKIPVSNKMD-VDFCKACVMGKSHRLPSSLS 635
S C T + WH RLGHPSL +L + +PV N + C C + KSH++P S S
Sbjct: 436 SPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNS 495
Query: 636 TTEYTSPLELVYSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFK 695
T + PLE +YSD+W SP S Y YY+ F+D ++RYTW+Y LK KS+ F FK
Sbjct: 496 TITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFK 554
Query: 696 ASSELQLNAKIKALQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDL 755
+ E + +I L +D GGEF V ++L GI H PHT NG+ ERKHRHIV++
Sbjct: 555 SLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEM 614
Query: 756 GLSLLAHASIPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTC 815
GL+LL+HAS+P TYW +AFS AVYLINRLPT LQ P KLF Q P+Y LKVFGC C
Sbjct: 615 GLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCAC 674
Query: 816 FPLMRPYNSHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKL- 873
+P +RPYN HKL+ +S++C F+GYS + Y CL +GR+Y S+ V FDE FP+
Sbjct: 675 YPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTN 734
Query: 874 --------------------------------------FAQNSNSPSLSPAVVLPSLPSV 895
S P SP+ + + S
Sbjct: 735 FGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSS 794
Query: 896 EHFSQPAIAQPSSS---LPSPFLPSPIASSDQ--------------NPSSTSPASAPATS 938
+ +I+ PSSS PS P P A Q NP+S SP S S
Sbjct: 795 SNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNS 854
Query: 939 EASAEIPSQVTIPTSSGQVSAPSSSG---------------------------NVHPMIT 971
S IPT S +S P+S N H M T
Sbjct: 855 PLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMAT 914
Query: 972 RSKNGIVQPRVQ---PTLLTVQLEPTTVKQALAHPQWLQAMQAEFDALQKNKTWSLVPLP 1028
R+K+GI +P + T L EP T QA+ +W QAM +E +A N TW LVP P
Sbjct: 915 RAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPP 974
Query: 1029 PGREAI-GCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYTETFSPVIKPVTIRVIL 1087
P I GC+W+F K N DG+LN+YKARLVAKG++Q+PG DY ETFSPVIK +IR++L
Sbjct: 975 PPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1034
Query: 1088 TLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGF-EHDK-KLVCRLHKALYGLKQAPR 1145
+A+ W I+QLDVNNAFL G L +EVYM QP GF + D+ VCRL KA+YGLKQAPR
Sbjct: 1035 GVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1094
Query: 1146 AWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
AW+ +L + L+ GFV S D SLFVL + +IY+L
Sbjct: 1095 AWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1131
Score = 82.8 bits (203), Expect = 1e-15
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 43/316 (13%)
Query: 34 KLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPRFVTERDRVAGTLNPAYSVWESKDQY 93
KL+ N+L+W +QV + + L + P D V +NP Y+ W +D+
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVP-RVNPDYTRWRRQDKL 83
Query: 94 LLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRSETLGNRTIS 153
+ S + ++S V + + Q+WE + + N + TQLR R
Sbjct: 84 IYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITR---------- 133
Query: 154 EFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEHSIDELEALL 213
D L +G P+ E ++ +L+ LP DY+ +I I+ + S+ E+ L
Sbjct: 134 ---------FDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERL 184
Query: 214 LAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGESQDSDPMDSYD 273
+ +E++L A V +N T ++ + + ++ + +++ +S+
Sbjct: 185 INRESKL------LALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQ 238
Query: 274 SSGHGRGSSRGRGARGRGRGRSSIQCQLCYKFGHDVWQC--YHRFNPN---------FVP 322
S G S + GR CQ+C GH +C H+F F P
Sbjct: 239 PSSSGSRSDNRQPKPYLGR------CQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTP 292
Query: 323 QKPPQNSPQNSQWNSS 338
+P N NS +N++
Sbjct: 293 WQPRANLAVNSPYNAN 308
Score = 30.4 bits (67), Expect = 6.3
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
Query: 328 NSPQNSQWNSSPQWHSNSQWSSTP----------QWNSQWSAPVSSPWQHSSSQWPPRYP 377
++ Q + +S+P W S++ +TP P SSP ++Q
Sbjct: 738 STSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNL 797
Query: 378 PAPSGYAPMASSPGVP-YRGPAPSPMGYAQAHVAFQTSTSTPQATSP 423
P+ S +P +S P P + GP P+ AQ H +++++P +P
Sbjct: 798 PSSSISSPSSSEPTAPSHNGPQPT----AQPHQTQNSNSNSPILNNP 840
>At1g58889 polyprotein, putative
Length = 1466
Score = 572 bits (1474), Expect = e-163
Identities = 365/958 (38%), Positives = 499/958 (51%), Gaps = 161/958 (16%)
Query: 342 HSNSQWSSTPQWNSQWSAPVSSPWQHSSSQWPPRYPPAPSGYAPMASSPGVPYRGPAPSP 401
++N+ + +++++ + S PWQ SS+ + P ++ PY G
Sbjct: 235 NNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN------------NNQSKPYLGKCQ-- 280
Query: 402 MGYAQAHVA--------FQTSTSTPQATSPAQSWYP-----------------DSGASHH 436
+ Q H A F +S ++ Q SP W P DSGA+HH
Sbjct: 281 ICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHH 340
Query: 437 VTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTLSSG---LVLNNLLHVPSITKNL 493
+TS+ N+ P+ G D + V +G +PIS GS++LS+ L L+N+L+VP+I KNL
Sbjct: 341 ITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNL 400
Query: 494 VSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKFHEFKLSHLPVSLSAP 553
+SV + NGV EF P VK + LLQG D LY++ P++ S
Sbjct: 401 ISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKT-KDELYEW--------PIASS-- 449
Query: 554 VQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHPSLNVLRKALQFCKIPVSNK 613
PVS+ S SS T + WH RLGHP+ ++L + + V N
Sbjct: 450 --QPVSLFASPSSKA--------------THSSWHARLGHPAPSILNSVISNYSLSVLNP 493
Query: 614 MDVDF-CKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSSSGYLYYITFIDAY 672
C C++ KS+++P S ST T PLE +YSD+W SP S Y YY+ F+D +
Sbjct: 494 SHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHF 552
Query: 673 SRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWGGEFRVFPNFLKDFGIHHR 732
+RYTW+Y LK KS+ F FK E + +I +D GGEF + GI H
Sbjct: 553 TRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHL 612
Query: 733 LICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVYLINRLPTSSLQFD 792
PHT NG+ ERKHRHIV+ GL+LL+HASIP TYW +AF+ AVYLINRLPT LQ +
Sbjct: 613 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLE 672
Query: 793 IPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGYSPSHRGYKCL-AS 851
P KLF P+Y L+VFGC C+P +RPYN HKLD +S++CVFLGYS + Y CL
Sbjct: 673 SPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQ 732
Query: 852 SGRIYISKDVIFDEHTFPYPKLFA--------QNSNSPSLSPAVVLPS----LPSVEHFS 899
+ R+YIS+ V FDE+ FP+ A + +S SP LP+ LP+
Sbjct: 733 TSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSD 792
Query: 900 QPAIAQPSSSLPSPFLPSPIASSD------------------------------------ 923
A P SS +PF S ++SS+
Sbjct: 793 PHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQT 852
Query: 924 --------QNPSSTSPA------SAPATSEASAEIPSQVTIPTSSGQVSAPSS------- 962
NP++ SP+ S PA S +S+ PS T +SS P S
Sbjct: 853 HSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSS--PSPTTSASSSSTSPTPPSILIHPPP 910
Query: 963 ------------SGNVHPMITRSKNGIVQPRVQPTL---LTVQLEPTTVKQALAHPQWLQ 1007
N H M TR+K GI++P + +L L + EP T QAL +W
Sbjct: 911 PLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRN 970
Query: 1008 AMQAEFDALQKNKTWSLVPLPPGREAI-GCKWVFRVKHNPDGTLNKYKARLVAKGFHQQP 1066
AM +E +A N TW LVP PP I GC+W+F K+N DG+LN+YKAR VAKG++Q+P
Sbjct: 971 AMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARFVAKGYNQRP 1030
Query: 1067 GFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGF-EH 1125
G DY ETFSPVIK +IR++L +A+ W I+QLDVNNAFL G L ++VYM QP GF +
Sbjct: 1031 GLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDK 1090
Query: 1126 DK-KLVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
D+ VC+L KALYGLKQAPRAW+ +L + L+ GFV S D SLFVL + ++Y+L
Sbjct: 1091 DRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYML 1148
Score = 97.4 bits (241), Expect = 4e-20
Identities = 68/298 (22%), Positives = 139/298 (45%), Gaps = 19/298 (6%)
Query: 34 KLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPRFVTERDRVAGTLNPAYSVWESKDQY 93
KL+ N+L+W +QV + + L + P D A +NP Y+ W+ +D+
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTD-AAPRVNPDYTRWKRQDKL 83
Query: 94 LLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRSETLGNRTIS 153
+ S + ++S V + + Q+WE + + N + TQLRT+L+ T G +TI
Sbjct: 84 IYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTID 143
Query: 154 EFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEHSIDELEALL 213
+++ + + D L +G P+ E ++ +L+ LP +Y+ +I I+ + ++ E+ L
Sbjct: 144 DYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERL 203
Query: 214 LAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGESQDSDPMDSYD 273
L E+++ ++V+ A P T ++AVS ++ + T + ++ D+ +
Sbjct: 204 LNHESKI-----------LAVSSATVIPIT--ANAVSHRNTTTTNNNNNGNRNNRYDNRN 250
Query: 274 SSGHGRGSSRGRGARGRGRGRSSI---QCQLCYKFGHDVWQC--YHRFNPNFVPQKPP 326
++ + + + +S +CQ+C GH +C F + Q+PP
Sbjct: 251 NNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPP 308
>At1g53810
Length = 1522
Score = 560 bits (1442), Expect = e-159
Identities = 331/830 (39%), Positives = 453/830 (53%), Gaps = 86/830 (10%)
Query: 409 VAFQTSTSTPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISG 468
+A T T W PDS AS HVT+ + Q P+ G D + V +G LPI+
Sbjct: 308 MALATMRITDVTDHHGHEWIPDSAASAHVTNNRHVLQQSQPYHGSDSIMVADGNFLPITH 367
Query: 469 IGSSTLSSG---LVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVL 525
GS +++S + L +L P I K+L+SVSK D EF + +A+ K+L
Sbjct: 368 TGSGSIASSSGKIPLKEVLVCPDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKLL 427
Query: 526 LQGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTAN 585
+ G DGLY E KL L S + ++
Sbjct: 428 VMGR-NRDGLYSLEEPKLQVL----------------------------YSTRQNSASSE 458
Query: 586 LWHFRLGHPSLNVLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLEL 645
+WH RLGH + VL + I + NK+ C+AC +GKS RLP LST + PLE
Sbjct: 459 VWHRRLGHANAEVLHQLASSKSIIIINKVVKTVCEACHLGKSTRLPFMLSTFNASRPLER 518
Query: 646 VYSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAK 705
++ DLWGPSP+ S G+ YY+ FID YSR+TW Y LK KS+ S F F+ E QL K
Sbjct: 519 IHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHK 578
Query: 706 IKALQTDWGGEF--RVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHA 763
IK Q D GGEF F L+D GI + CP+T QNG+ ERKHRHIV+LGLS++ +
Sbjct: 579 IKIFQCDGGGEFISSQFLKHLQDHGIQQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQS 638
Query: 764 SIPLTYWDFAFSTAVYLINRLPTSSL-QFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPY 822
+PL YW +F TA ++IN LPTSSL + P KL+ + P+Y+ L+VFGC C+P +R Y
Sbjct: 639 KLPLKYWLESFFTANFVINLLPTSSLDNNESPYQKLYGKAPEYSALRVFGCACYPTLRDY 698
Query: 823 NSHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQ---NS 878
S K D RS +CVFLGY+ ++GY+CL +GRIYIS+ V+FDE+T P+ +++
Sbjct: 699 ASTKFDPRSLKCVFLGYNEKYKGYRCLYPPTGRIYISRHVVFDENTHPFESIYSHLHPQD 758
Query: 879 NSPSL-----SPAVVLPSLPSVEHFSQPAIAQPSSSLPSPFLPSPIASSDQNPSSTSPAS 933
+P L S V P+ P + +I QP ++ S P+ +A+ P+++ S
Sbjct: 759 KTPLLEAWFKSFHHVTPTQPDQSRYPVSSIPQPETTDLSA-APASVAAETAGPNASDDTS 817
Query: 934 AP-------------ATSEASAEIPSQVTIPTSSGQVSAPSSSG---------------- 964
T SA I PT+ +P+ S
Sbjct: 818 QDNETISVVSGSPERTTGLDSASIGDSYHSPTADSSHPSPARSSPASSPQGSPIQMAPAQ 877
Query: 965 -------NVHPMITRSKNGIVQPRVQPTLLTVQL---EPTTVKQALAHPQWLQAMQAEFD 1014
N H M+TR K GI +P + LLT ++ EP TV +AL HP W AMQ E
Sbjct: 878 QVQAPVTNEHAMVTRGKEGISKPNKRYVLLTHKVSIPEPKTVTEALKHPGWNNAMQEEMG 937
Query: 1015 ALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYTETF 1074
++ +TW+LVP P +G WVFR K + DG+L+K KARLVAKGF Q+ G DY ET+
Sbjct: 938 NCKETETWTLVPYSPNMNVLGSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLETY 997
Query: 1075 SPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFEHDKK--LVCR 1132
SPV++ T+R+IL +A W ++Q+DV NAFL+GDL E VYM+QP GF K VC
Sbjct: 998 SPVVRTPTVRLILHVATVLKWELKQMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDHVCL 1057
Query: 1133 LHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
LHK+LYGLKQ+PRAWF++ ++ L++FGF+ S DPSLFV S VI +L
Sbjct: 1058 LHKSLYGLKQSPRAWFDRFSNFLLEFGFICSLFDPSLFVYSSNNDVILLL 1107
Score = 122 bits (307), Expect = 9e-28
Identities = 83/310 (26%), Positives = 143/310 (45%), Gaps = 31/310 (10%)
Query: 31 ISEKLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPP---RFVTERDRVAGTLNPAYSVW 87
++ L+ +N++LWK Q E + L V P R VT + + NP + W
Sbjct: 15 VTVTLNQQNYILWKSQFESFLSGQGLLGFVTGSISAPAQTRSVTHNNVTSEEPNPEFYTW 74
Query: 88 ESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRSETL 147
DQ + SWL S + +LS ++ C S Q+W + + F+ + ++ +L+ L++
Sbjct: 75 HQTDQVVKSWLLGSFAEDILSVVVNCFTSHQVWLTLANHFNRVSSSRLFELQRRLQTLEK 134
Query: 148 GNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEH--- 204
+ T+ FL +K I D L ++G P+ + + L GL +YE + T I + +
Sbjct: 135 KDNTMEVFLKDLKHICDQLASVGSPVPEKMKIFSALNGLGREYEPIKTTIENSVDSNPSL 194
Query: 205 SIDELEALLLAKEARLGKYRT-PSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGES 263
S+DE+ + L + RL Y T P+ + ++ NV S+ H ++G+
Sbjct: 195 SLDEVASKLRGYDDRLQSYVTEPTISPHVAFNVTHSD-----------SGYYHNNNRGKG 243
Query: 264 QDSDPMDSYDSSGHGRGSSRGRG-------ARGRGRGRSSIQCQLCYKFGHDVWQCYHRF 316
+ S SG S+RGRG G G S + CQ+C K GH +C+HRF
Sbjct: 244 R------SNSGSGKSSFSTRGRGFHQQISPTSGSQAGNSGLVCQICGKAGHHALKCWHRF 297
Query: 317 NPNFVPQKPP 326
+ ++ + P
Sbjct: 298 DNSYQHEDLP 307
>At1g60020 hypothetical protein
Length = 1194
Score = 547 bits (1409), Expect = e-155
Identities = 326/835 (39%), Positives = 444/835 (53%), Gaps = 105/835 (12%)
Query: 424 AQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGS---STLSSGLVL 480
A +W DSGA+HH+TS+ N+ P+ G + + + +G GL IS GS ST S L L
Sbjct: 285 ANNWLLDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGSALISTPSRSLAL 344
Query: 481 NNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKFHE 540
++L+VP+I KNL+SV + N V EF P + VK + LLQG D LY++
Sbjct: 345 TDVLYVPNIHKNLISVYRMCNANKVSVEFFPAHFQVKDLKTGVQLLQGRT-KDELYEW-- 401
Query: 541 FKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHPSLNVLR 600
PV P S H P WH RLGHPSL+ L+
Sbjct: 402 ------------PVNPP-------KPSSHFTTTTPKT-----DLTSWHSRLGHPSLSTLK 437
Query: 601 KALQFCKIPVSNKMDVDF-CKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSS 659
+ +PVSN + F C C++ K+H+LP +T T PLE +Y DLW SP S
Sbjct: 438 VVVSQFSLPVSNSLQKQFNCSDCLLNKTHKLPFHTNTITSTQPLEYLYIDLW-TSPIVSI 496
Query: 660 SGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWGGEFRV 719
+ YY+ +D Y+RY+W Y +K KS F FKA + KI L +D GGEF
Sbjct: 497 DNFKYYLVIVDHYTRYSWFYPIKQKSHVKDVFMTFKALVANKFQRKIIHLYSDNGGEFIA 556
Query: 720 FPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVY 779
+FL GI H PHT NG+ ERKHRHIV+ GL+LL AS+P +YW +AF+ A+Y
Sbjct: 557 LRSFLSSNGITHLTTPPHTPEHNGISERKHRHIVETGLTLLGQASMPKSYWSYAFTIAIY 616
Query: 780 LINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGY 839
LINR+ + + P +LF Q P+Y L+VFGC CFP +RPY +HKLD R CVFLGY
Sbjct: 617 LINRMSSDVIGGISPYKRLFGQAPNYLKLRVFGCLCFPWLRPYTTHKLDDRPAPCVFLGY 676
Query: 840 SPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPK------LFAQNSNSPSLS------PA 886
S + Y CL ++GR+Y S+ V F E+T+P+ K + SN+ S++ P
Sbjct: 677 SQTQSAYLCLNRTTGRVYTSRHVQFVENTYPFTKPTLDPFTNLEESNNHSITTTVPSPPF 736
Query: 887 VVLPSLPS-VEHFSQPAIAQPSSSLPSPFLP----------------------------- 916
V LPS+P QP +QP+ S PSP P
Sbjct: 737 VQLPSVPPPTRDPHQPPPSQPAPS-PSPLSPPSMSSPVMTSSPQFSSNRDSTTLHGDYSH 795
Query: 917 ------------SPIASSDQNPSSTSPASAPATS-----------EASAEIPSQVTIPTS 953
PI S + S + P S+P+ S +S+ P+ + P+
Sbjct: 796 VDYGLSSPSNPPGPITSPTTSKSPSEPTSSPSHSNQPNKTPPNSPSSSSSSPTPIPSPSP 855
Query: 954 SGQVSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTV----QLEPTTVKQALAHPQWLQAM 1009
S P N H M TR+KN I +P + TL PTTV +AL P W AM
Sbjct: 856 QSSNSPPPPPQNQHSMRTRAKNNITKPIKKLTLAATPKGKSKIPTTVAEALRDPNWRNAM 915
Query: 1010 QAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFD 1069
EF+A +N T+ LVP P + +G +W+F +K+NPDG++N+YKAR +AKGFHQQ G D
Sbjct: 916 SEEFNAGLRNSTYDLVPPKPHQNFVGTRWIFTIKYNPDGSINRYKARFLAKGFHQQHGLD 975
Query: 1070 YTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFEHDKK- 1128
Y+ TFSPVIK T++ +L +A++ W I+QLD+NNAFL G L E+VY+ QP GF + +
Sbjct: 976 YSNTFSPVIKSTTVQTVLDIAVSRSWDIRQLDINNAFLQGRLTEDVYVAQPPGFINPDRP 1035
Query: 1129 -LVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
VC L KAL+GLKQAPRAW+++L L+ GF S + SLF+ IY+L
Sbjct: 1036 NYVCHLKKALHGLKQAPRAWYQELRGFLLTCGFTNSVANTSLFIRQHNKDYIYIL 1090
Score = 85.5 bits (210), Expect = 2e-16
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 34 KLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPRFVTERDRVAGTLNPAYSVWESKDQY 93
KL+ N+++W +QV ++ ++L + P + V+ NPAY W+ +D+
Sbjct: 30 KLTPTNYIMWNRQVHALLDGYDLAGYIDGSVTAPSEMITTAGVSAA-NPAYKFWKRQDKL 88
Query: 94 LLSWLQSSLST---PVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRSETLGNR 150
+ S + +++T P+LSR A ++WEK+ S + + Q+R ++ + G +
Sbjct: 89 IYSAILGTITTTIQPLLSRSNTAA---EIWEKLKSIYATPSWGHIQQMRQHIKQWSKGTK 145
Query: 151 TISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEHSIDELE 210
TI+E+ + D L +G P+ E ++ +L GL DY+ ++ R + ++ EL
Sbjct: 146 TITEYFQGHTTRFDELALLGKPLEHAEQIEFLLGGLSEDYKSVVDQTEIRDKPPTLTELL 205
Query: 211 ALLLAKEARL--GKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGESQDSDP 268
LL +EA+L TPS N + + + SH +S SQ S P
Sbjct: 206 EKLLNREAKLMCAAATTPSLPATAHAANYKGNSNNNQYNNNNRNNKSHGSSY-NSQQSIP 264
Query: 269 MDSY 272
+
Sbjct: 265 ASPF 268
Score = 33.5 bits (75), Expect = 0.74
Identities = 33/128 (25%), Positives = 53/128 (40%), Gaps = 5/128 (3%)
Query: 318 PNFVPQKPPQNSPQNSQWNSSPQWHSNSQWSSTPQWNS-QWSAPVSSPWQH-SSSQWPPR 375
P P +PP + P S SP S+ +S+PQ++S + S + + H P
Sbjct: 745 PTRDPHQPPPSQPAPSPSPLSPPSMSSPVMTSSPQFSSNRDSTTLHGDYSHVDYGLSSPS 804
Query: 376 YPPAPSGYAPMASSPGVPYRGPAPSPMGYAQAHVAFQTSTSTPQATSPAQSWYPDSGASH 435
PP P + SP P P+ S + +S+S+P +P S P S S
Sbjct: 805 NPPGPITSPTTSKSPSEPTSSPSHSNQPNKTPPNSPSSSSSSP---TPIPSPSPQSSNSP 861
Query: 436 HVTSESQN 443
++Q+
Sbjct: 862 PPPPQNQH 869
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 538 bits (1387), Expect = e-153
Identities = 311/777 (40%), Positives = 439/777 (56%), Gaps = 64/777 (8%)
Query: 425 QSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTLSSG---LVLN 481
+ W+PDS A+ HVTS + + T + G D + VG+G LPI+ GS+T+ S + LN
Sbjct: 320 KEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLN 379
Query: 482 NLLHVPSITKNLVSVSKFARDN--GVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKFH 539
+L VP+I K+L+SVSK D GV+F+ + C+ + KV+ G +GLY
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKV--CIIDLQTQKVVTTGP-RRNGLYVLE 436
Query: 540 EFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHPSLNVL 599
Q V+++++ + T +WH RLGH + L
Sbjct: 437 N--------------QEFVALYSNRQCAA--------------TEEVWHHRLGHANSKAL 468
Query: 600 RKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSS 659
+ I ++ C+ C MGKS RLP +S + PL+ ++ DLWGPSP S+
Sbjct: 469 QHLQNSKAIQINKSRTSPVCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSN 528
Query: 660 SGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWGGEF-- 717
G YY F+D YSRY+W Y L KSE +S F F+ E QLN KIK Q+D GGEF
Sbjct: 529 QGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVS 588
Query: 718 RVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAFSTA 777
L + GIHHR+ CP+T QNG+ ERKHRH+V+LGLS+L H+ P +W +F TA
Sbjct: 589 NKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTA 648
Query: 778 VYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQECVFL 837
Y+INRLP+S L+ P LF + PDY+ L+VFG C+P +RP +K D RS +CVFL
Sbjct: 649 NYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFL 708
Query: 838 GYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQNSNSPSLSPAVVLPSLPSVE 896
GY+ ++GY+C +G++YIS++VIF+E P+ + + SL P P L + +
Sbjct: 709 GYNSQYKGYRCFYPPTGKVYISRNVIFNESELPFKEKY------QSLVPQYSTPLLQAWQ 762
Query: 897 HFSQPAIAQPSSSLPSPFLPSPI-----ASSDQNPSSTSPASAPATSEASAEI-PSQVTI 950
H I+ P++ P PI A S T P + E+ P I
Sbjct: 763 HNKISEISVPAA--PVQLFSKPIDLNTYAGSQVTEQLTDPEPTSNNEGSDEEVNPVAEEI 820
Query: 951 PTSSGQVSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTVQL---EPTTVKQALAHPQWLQ 1007
+ QV N H M TRSK GI +P + L+T ++ EP T+ A+ HP W +
Sbjct: 821 AANQEQVI------NSHAMTTRSKAGIQKPNTRYALITSRMNTAEPKTLASAMKHPGWNE 874
Query: 1008 AMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPG 1067
A+ E + + TWSLVP + KWVF+ K +PDG+++K KARLVAKGF Q+ G
Sbjct: 875 AVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEG 934
Query: 1068 FDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFEHDK 1127
DY ETFSPV++ TIR++L ++ + W I+QLDV+NAFL+G+L E V+M QP GF +
Sbjct: 935 VDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQ 994
Query: 1128 K--LVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
K VCRL KA+YGLKQAPRAWF+ ++ L+ +GFV SK DPSLFV + ++Y+L
Sbjct: 995 KPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLL 1051
Score = 115 bits (288), Expect = 1e-25
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 47/339 (13%)
Query: 28 TYTISEKLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPP---RFVTERDRVAGTLNPAY 84
T +++ KL+D N+LLWK Q E ++ + L V P R V + + NP Y
Sbjct: 14 TSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLY 73
Query: 85 SVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRS 144
W DQ + SWL +LS VL + + S Q+W + F+ + A+ LR L+
Sbjct: 74 ESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQL 133
Query: 145 ETLGNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEH 204
+ + S + + K+I D+L +IG P+ + L GL DY+ + T+I
Sbjct: 134 LSKKEKPFSVYCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDPITTVI------- 186
Query: 205 SIDELEALLLAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQ---- 260
++ L K TP + N +S Q S S + A+ T
Sbjct: 187 ------------QSSLSKLPTP------TFNDVVSEVQGFDSKLQSYEEAASVTPHLAFN 228
Query: 261 -GESQDSDPMDSYDSSGHGR-GSSRGRGARG-RGRGRSSIQ-----------CQLCYKFG 306
S+ P + + G GR G ++GRG RGRG S Q CQ+C + G
Sbjct: 229 IERSESGSPQYNPNQKGRGRSGQNKGRGGYSTRGRGFSQHQSSPQVSGPRPVCQICGRTG 288
Query: 307 HDVWQCYHRFNPNFVPQKPPQNSPQNSQWNSSPQWHSNS 345
H +CY+RF+ N+ + ++ + S ++ +WH +S
Sbjct: 289 HTALKCYNRFDNNYQAEIQAFSTLRVSD-DTGKEWHPDS 326
>At4g28900 putative protein
Length = 1415
Score = 520 bits (1338), Expect = e-147
Identities = 316/824 (38%), Positives = 451/824 (54%), Gaps = 84/824 (10%)
Query: 410 AFQTSTSTPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGI 469
AF + Q ++P W DSGA+ H+T+ + + P++G+D + VGN LPI+ I
Sbjct: 279 AFAAMRVSDQKSNP---WVTDSGATSHITNSTSQLQSAQPYSGEDSVIVGNSDFLPITHI 335
Query: 470 GSSTLSSG---LVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLL 526
GS+ L+S L L ++L P+ITK+L+SVSK D EF VK + + ++L
Sbjct: 336 GSAVLTSNQGNLPLRDVLVCPNITKSLLSVSKLTSDYPCVIEFDSDGVIVKDKLTKQLLT 395
Query: 527 QGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANL 586
+G+ D LY K SS A ++ +
Sbjct: 396 KGTRHND-LYLLENPKFM-----------------ACYSSRQQATSDE-----------V 426
Query: 587 WHFRLGHPSLNVLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELV 646
WH RLGHP+ +VL++ L+ I +S K C AC MGK +LP + S + LE V
Sbjct: 427 WHMRLGHPNQDVLQQLLRNKAIVIS-KTSHSLCDACQMGKICKLPFASSDFVSSRLLERV 485
Query: 647 YSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKI 706
+ DLWGP+P SS G+ YY+ FID YSR+TW Y L+ KS+ S F F+ E Q KI
Sbjct: 486 HCDLWGPAPVVSSQGFRYYVIFIDNYSRFTWFYPLRLKSDFFSVFLTFQKMVENQCQQKI 545
Query: 707 KALQTDWGGEF--RVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHAS 764
+ Q D GGEF F + L + GI + CP+T QNG+ ERKHRHI +LG S++
Sbjct: 546 ASFQCDGGGEFISNQFVSHLAECGIRQLISCPYTPQQNGIAERKHRHITELGSSMMFQGK 605
Query: 765 IPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYK-LFKQIPDYTFLKVFGCTCFPLMRPYN 823
+P W AF T+ +L N LP+S L+ Y+ L + P YT L+VFGC C+P +RPY
Sbjct: 606 VPQFLWVEAFYTSNFLCNLLPSSVLKDQKSPYEVLMGKAPVYTSLRVFGCACYPNLRPYA 665
Query: 824 SHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFA---QNSN 879
S+K D +S CVF GY+ ++GYKC +G+IYI++ V+FDE F + +++ +N
Sbjct: 666 SNKFDPKSLLCVFTGYNEKYKGYKCFHPPTGKIYINRHVLFDESKFLFSDIYSDKVSGTN 725
Query: 880 SPSLSP------AVVLPSLPSVEHFSQPAIA--------------------QPSSSLP-S 912
S +S +P+ P V S A + S+P
Sbjct: 726 STLVSAWQSNFLPKSIPATPEVLDISNTAASFSDEQGEFSGAVGGGGCGCTADLDSVPIG 785
Query: 913 PFLPSPIASSDQNPSSTSPASAPAT---------SEASAEIPSQVTIPTSSGQVSAPSSS 963
LPS + +P +P S+ + SE S S V ++ +A +++
Sbjct: 786 NSLPSSPVTQQNSPQPETPISSAGSGNDAEDSELSENSENSESSVFSEATTETEAADNTN 845
Query: 964 GNVHPMITRSKNGIVQPRVQPTLLTVQLE---PTTVKQALAHPQWLQAMQAEFDALQKNK 1020
HPMITRSK+GI +P + + TV+ P TVK AL P W AM E+D+ ++
Sbjct: 846 DQSHPMITRSKSGIFKPNPKYAMFTVKSNYPVPKTVKTALKDPGWTDAMGEEYDSFEETH 905
Query: 1021 TWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYTETFSPVIKP 1080
TW LVP +GC+WVF+ K DGTL++ KARLVAKG+ Q+ G DY ET+SPV++
Sbjct: 906 TWDLVPPDSFITPLGCRWVFKTKLKADGTLDRLKARLVAKGYEQEEGVDYMETYSPVVRT 965
Query: 1081 VTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFEHDKK--LVCRLHKALY 1138
T+R IL +A N W I+QLDV NAFL+GDL E VYM QP GFE+ + VC+L+KA+Y
Sbjct: 966 ATVRTILHVATINKWEIKQLDVKNAFLHGDLKETVYMYQPPGFENQDRPDYVCKLNKAIY 1025
Query: 1139 GLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
GLKQAPRAWF+K ++ L++FGF+ + DPSLFV K ++++L
Sbjct: 1026 GLKQAPRAWFDKFSTFLLEFGFICTYSDPSLFVFLKGRDLMFLL 1069
Score = 90.1 bits (222), Expect = 7e-18
Identities = 68/298 (22%), Positives = 124/298 (40%), Gaps = 45/298 (15%)
Query: 28 TYTISEKLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPP---RFVTERDRVAGTLNPAY 84
++ ++ KLS N+LLWK Q E + L V P R + D+V NP +
Sbjct: 14 SHYVTLKLSTANYLLWKIQFETWLNNQRLLGFVTGANPCPNATRSIRNGDQVTEATNPDF 73
Query: 85 SVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRTELRS 144
W DQ ++ WL SLS L + G S ++W + ++ + ++ + L+ L
Sbjct: 74 LTWVQNDQKIMGWLLGSLSEDALRSVYGLHTSREVWFSLAKKYNRVSASRKSDLQRRLNP 133
Query: 145 ETLGNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTRFEEH 204
+ +++ E+L +K I D L +IG P+ E + +L GL +Y + T+I + +
Sbjct: 134 VSKNEKSMLEYLNCVKQICDQLDSIGCPVPENEKIFGVLNGLGQEYMLVSTMIKGSMDTY 193
Query: 205 --SIDELEALLLAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQSASHTTSQGE 262
S +++ L+ + +L G+
Sbjct: 194 PMSFEDVVFKLINFDDKL--------------------------------------QNGQ 215
Query: 263 SQDSDPMDSYDSSGHGRGSSRGRGARGRGRGRSSIQCQLCYKFGHDVWQCYHRFNPNF 320
S + ++Y + G G G+ R + CQ+C K+GH ++C+ RF+ F
Sbjct: 216 SGGNRGRNNYTTKGRGFPQQISSGSPSDSGTRPT--CQICNKYGHSAYKCWKRFDHAF 271
>At4g10690 retrotransposon like protein
Length = 1515
Score = 508 bits (1309), Expect = e-144
Identities = 320/840 (38%), Positives = 445/840 (52%), Gaps = 102/840 (12%)
Query: 410 AFQTSTSTPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGI 469
AF + Q + + W PDS A+ H+T+ + + ++G D + VGNG LPI+ I
Sbjct: 307 AFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHI 366
Query: 470 GSSTLSSG---LVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLL 526
G+ L+ L L ++L P ITK+L+SVSK D F F +K + + ++L
Sbjct: 367 GTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLLT 426
Query: 527 QGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANL 586
QG+ GLY V P Q S S +
Sbjct: 427 QGNKHK-GLY-----------VLKDVPFQTYYSTRQQSSDD-----------------EV 457
Query: 587 WHFRLGHPSLNVLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELV 646
WH RLGHP+ VL+ ++ K V NK + C+AC MGK RLP S + PLE +
Sbjct: 458 WHQRLGHPNKEVLQHLIK-TKAIVVNKTSSNMCEACQMGKVCRLPFVASEFVSSRPLERI 516
Query: 647 YSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKI 706
+ DLWGP+P S+ G+ YY+ FID YSR+TW Y LK KS+ S F F+ E Q KI
Sbjct: 517 HCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPLKLKSDFFSVFVLFQQLVENQYQHKI 576
Query: 707 KALQTDWGGEF--RVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHAS 764
Q D GGEF F L GI + CPHT QNG+ ER+HR++ +LGLSL+ H+
Sbjct: 577 AMFQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSK 636
Query: 765 IPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPD-YTFLKVFGCTCFPLMRPYN 823
+P W AF T+ +L N LP+S+L + Y++ P YT L+VFG C+P +RPY
Sbjct: 637 VPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYA 696
Query: 824 SHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQ---NSN 879
+K D +S CVFLGY+ ++GY+CL +G++YI + V+FDE FPY +++Q S
Sbjct: 697 KNKFDPKSLLCVFLGYNNKYKGYRCLHPPTGKVYICRHVLFDERKFPYSDIYSQFQTISG 756
Query: 880 SP-------SLSPAVVLPSLPS--VEHFSQPAIAQPSSSLPSPFL--------------- 915
SP S + PS VE P+ A SSS+P+
Sbjct: 757 SPLFTAWQKGFSSTALSRETPSTNVEDIIFPS-ATVSSSVPTGCAPNIAETATAPDVDVA 815
Query: 916 --------PSPIAS-----------SDQNPSSTSPASAPATSEASAEIPSQVTI------ 950
PSPI S SDQN ST T+ +SA P + +
Sbjct: 816 AAHDMVVPPSPITSTSLPTQPEESTSDQNHYSTD----SETAISSAMTPQSINVSLFEDS 871
Query: 951 ---PTSSGQVSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTVQL---EPTTVKQALAHPQ 1004
P S S ++ HPMITR+K+GI +P + L +V+ EP +VK+AL
Sbjct: 872 DFPPLQSVISSTTAAPETSHPMITRAKSGITKPNPKYALFSVKSNYPEPKSVKEALKDEG 931
Query: 1005 WLQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQ 1064
W AM E + + TW LVP +GCKWVF+ K N DG+L++ KARLVA+G+ Q
Sbjct: 932 WTNAMGEEMGTMHETDTWDLVPPEMVDRLLGCKWVFKTKLNSDGSLDRLKARLVARGYEQ 991
Query: 1065 QPGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFE 1124
+ G DY ET+SPV++ T+R IL +A N W+++QLDV NAFL+ +L E V+M QP GFE
Sbjct: 992 EEGVDYVETYSPVVRSATVRSILHVATINKWSLKQLDVKNAFLHDELKETVFMTQPPGFE 1051
Query: 1125 HDKK--LVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
+ VC+L KA+Y LKQAPRAWF+K +S L+++GF+ S DPSLFV K V+++L
Sbjct: 1052 DPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDVMFLL 1111
Score = 103 bits (257), Expect = 6e-22
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 26/281 (9%)
Query: 70 VTERDRVAGTLNPAYSVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHN 129
VT+ D + N + W DQ + +W+ SLS L +IG + ++W + F+
Sbjct: 55 VTKDDIQSEEANQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNR 114
Query: 130 QTRAKSTQLRTELRSETLGNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSD 189
+ + L+ L + + +T+ +L ++K+I D L +IG P++ +E + +L GL +
Sbjct: 115 FSTTRKYDLQKRLGTCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKE 174
Query: 190 YEDLITLISTRFEEHSIDE-----LEALLLAKEARLGKYRTPSATGEISVNVALSNPQTP 244
YE + T+I EHS+D + ++ K T +A E++ ++A ++
Sbjct: 175 YESIATVI-----EHSLDVYPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSY 229
Query: 245 SSSAVSTQSASHTTSQGESQDSDPMDSYDSSGHGRGSSRGRGARGRGRGRSSIQCQLCYK 304
SS ++ + G + SY S G G G G+ S CQ+C K
Sbjct: 230 SS------RGNNNSRGGRYGNFRGRGSYSSRGRGFHQQFGSGSNNGSGNGSKPTCQICRK 283
Query: 305 FGHDVWQCYHRFNPNFVPQKPP----------QNSPQNSQW 335
+GH ++CY RF N++P+ P QN + +W
Sbjct: 284 YGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEW 324
>At4g27210 putative protein
Length = 1318
Score = 504 bits (1297), Expect = e-142
Identities = 315/798 (39%), Positives = 428/798 (53%), Gaps = 111/798 (13%)
Query: 427 WYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTL--SSGLV-LNNL 483
W PDS A+ HVT+ +++ Q P+ G D + V +G LPI+ GS+ L SSG V L ++
Sbjct: 177 WLPDSAATAHVTNSPRSLQQSQPYHGTDAIMVDDGNYLPITHTGSTNLASSSGTVPLTDV 236
Query: 484 LHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKFHEFKL 543
L PSITK+L+S+SK +D EF V +A+ K+LL GS DGLY + K
Sbjct: 237 LVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLLLMGS-NRDGLYCLKDDK- 294
Query: 544 SHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHPSLNVLRKAL 603
Q T S+ +WH RLGHP +L+
Sbjct: 295 -----------QFQAFFSTRQRSASD---------------EVWHRRLGHPHPQILQ--- 325
Query: 604 QFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSSSGYL 663
PLE V+ DLWGP+ S G+
Sbjct: 326 --------------------------------------PLERVHCDLWGPTTITSVQGFR 347
Query: 664 YYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWGGEF--RVFP 721
YY FID YSR++WIY LK KS+ + F F E QL+ KI Q D GGEF F
Sbjct: 348 YYAVFIDHYSRFSWIYPLKLKSDFYNIFLAFHKLVENQLSQKISVFQCDGGGEFVSHKFL 407
Query: 722 NFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVYLI 781
L+ GI +L CPHT QNG+ ERKHRH+V+LGLS+L + +P +W AF TA +LI
Sbjct: 408 QHLQSHGIQQQLSCPHTPQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLI 467
Query: 782 NRLPTSSLQFDI-PLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGYS 840
N LPTS+L+ I P KL+ + PDYT L+ FG CFP +R Y +K + S +CVFLGY+
Sbjct: 468 NLLPTSALKESISPYEKLYDKKPDYTSLRSFGSACFPTLRDYAENKFNPCSLKCVFLGYN 527
Query: 841 PSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQ---NSNSPSLSPAVVLPSLPSVE 896
++GY+CL +GR+YIS+ VIFDE +P+ + +P L+ + P+
Sbjct: 528 EKYKGYRCLYPPTGRLYISRHVIFDESVYPFSHTYKHLHPQPRTPLLAAWLRSSDSPAPS 587
Query: 897 HFSQPAIAQP---SSSLP------SPFLPS--PIASSDQNPSSTSPASAPATSEASAEIP 945
+ P+ P S+ P +P LP+ PI+S + T+ S SE + +
Sbjct: 588 TSTSPSSRSPLFTSADFPPLPQRKTPLLPTLVPISSVSHASNITTQQSPDFDSERTTDFD 647
Query: 946 S----------------QVTIPTSSGQVSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTV 989
S + TI +S V +S NVHPM+TR+K GI +P + L+
Sbjct: 648 SASIGDSSHSSQAGSDSEETIQQASVNVHQTHASTNVHPMVTRAKVGISKPNPRYVFLSH 707
Query: 990 QL---EPTTVKQALAHPQWLQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNP 1046
++ EP TV AL HP W AM E + +TWSLVP +G KWVFR K +
Sbjct: 708 KVSYPEPKTVTAALKHPGWTGAMTEEIGNCSETQTWSLVPYKSDMHVLGSKWVFRTKLHA 767
Query: 1047 DGTLNKYKARLVAKGFHQQPGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAF 1106
DGTLNK KAR+VAKGF Q+ G DY ET+SPV++ T+R++L LA +W I+Q+DV NAF
Sbjct: 768 DGTLNKLKARIVAKGFLQEEGIDYLETYSPVVRTPTVRLVLHLATALNWDIKQMDVKNAF 827
Query: 1107 LNGDLAEEVYMQQPQGFEHDKK--LVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASK 1164
L+GDL E VYM QP GF K VC LHK++YGLKQ+PRAWF+K ++ L++FGF SK
Sbjct: 828 LHGDLKETVYMTQPAGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSK 887
Query: 1165 CDPSLFVLSKKPLVIYVL 1182
DPSLF+ + +I +L
Sbjct: 888 SDPSLFIYAHNNNLILLL 905
Score = 39.3 bits (90), Expect = 0.013
Identities = 19/77 (24%), Positives = 41/77 (52%)
Query: 137 QLRTELRSETLGNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITL 196
+L+ L++ + ++T+ +L +K+I D L ++G P++ + + L GL +YE + T
Sbjct: 49 ELQRRLQNVSKRDKTMDAYLNDLKNICDQLASVGSPVTEKMKIFAALNGLGREYEPIKTT 108
Query: 197 ISTRFEEHSIDELEALL 213
I + LE ++
Sbjct: 109 IENSMDTQPGPSLENVI 125
>At2g14930 pseudogene
Length = 1149
Score = 465 bits (1197), Expect = e-131
Identities = 295/784 (37%), Positives = 410/784 (51%), Gaps = 70/784 (8%)
Query: 422 SPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTL---SSGL 478
S W PDS A+ H+T+ S + Q P+ G D + +G LPI+ IGS+ L S L
Sbjct: 309 SDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFLPITHIGSANLPSTSGNL 368
Query: 479 VLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKF 538
L ++L P+I K+L+SVSK +D F F VK +A+ KVL +GS ++GLYK
Sbjct: 369 PLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKGSSTSEGLYKL 428
Query: 539 H--EFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHPSL 596
+F++ + + A T +WH RLGHP+
Sbjct: 429 ENPKFQMFYSTRQVKA------------------------------TDEVWHMRLGHPNP 458
Query: 597 NVL-----RKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELVYSDLW 651
VL +KA+Q NK C++C +GKS RLP S + PLE V+ DLW
Sbjct: 459 QVLQLLANKKAIQI------NKSTSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLW 512
Query: 652 GPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQT 711
GP+P S G+ YY+ FID SR+ W Y LK KS+ S F +F++ E L KI Q+
Sbjct: 513 GPAPVSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQS 572
Query: 712 DWGGEFRV--FPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTY 769
D GGEF F L++ GI H + CPHT QNG+ ERKHR + + GL+L+ + P +
Sbjct: 573 DGGGEFTSNRFLQHLQESGIQHYISCPHTPQQNGLAERKHRQLTERGLTLMFQSKAPQRF 632
Query: 770 WDFAFSTAVYLINRLPTSSLQFDIPLYK-LFKQIPDYTFLKVFGCTCFPLMRPYNSHKLD 828
W AF TA +L N LPTS+L Y+ LF + PDY+ L+ FGC CFP +R Y +K D
Sbjct: 633 WVEAFFTANFLSNLLPTSALDSSTTPYQVLFGKAPDYSALRTFGCACFPTLRAYARNKFD 692
Query: 829 FRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQNSNSPSLSPAV 887
RS +C+FLGY+ ++GY+C + R+Y+S+ V+FDE +FP+ + + PS +P
Sbjct: 693 PRSLKCIFLGYTEKYKGYRCFFPPTNRVYLSRHVLFDESSFPFIDTYTSLQH-PSPTPMF 751
Query: 888 -----VLPSLPSVEHFSQPAIAQPSSSLP--SPFLPSPIASSDQNPSSTSPASAPATSEA 940
PS S Q A +S+P + PI S P+ P S
Sbjct: 752 DAWLKSFPSSSSPLENDQTAGFNSGASVPVITAQQTQPILSLKDGPNILLPEGEITVSSN 811
Query: 941 SAEIPSQVTIPTSSGQVSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTVQLEPTTVKQAL 1000
+ +I + P + SS N T S + L+P
Sbjct: 812 NQDIEDE---PICVTPLQTLSSEDNAKSSETLSMGS---EECSECTASFDLDPIGNNALS 865
Query: 1001 AHPQWLQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAK 1060
+ P+ Q + + + T S P+ + K RVK N DG+L+KYKARLVA+
Sbjct: 866 SSPRHDQLTSS----IPRAATESTHPMTTRLKKGIIKLNQRVKLNVDGSLDKYKARLVAQ 921
Query: 1061 GFHQQPGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQP 1120
GF Q+ G DY ET+SPV++ T+R +L L+ +W ++Q+DV N FL+GDL E VYM+QP
Sbjct: 922 GFKQEEGIDYLETYSPVVRSATVRAVLHLSTIMNWELKQMDVKNGFLHGDLTETVYMKQP 981
Query: 1121 QGF--EHDKKLVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLV 1178
GF + VC LHKALYGLKQAPRAWF+K + L+ FGFV S DPSLFV K V
Sbjct: 982 AGFIDKAHPDHVCLLHKALYGLKQAPRAWFDKFSKFLLSFGFVCSMSDPSLFVCVKNKDV 1041
Query: 1179 IYVL 1182
I +L
Sbjct: 1042 IMLL 1045
Score = 105 bits (261), Expect = 2e-22
Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 47/315 (14%)
Query: 21 FKLPSLS-TYTISEKLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPRFVTERDRVAGT 79
+ LPSL+ + ++ KL+DRN++LWK Q E + L V P + AG
Sbjct: 8 YTLPSLNISNCVTVKLTDRNYILWKSQFESFLSGQGLLGFVNGAYAAPTGTVSGPQDAGV 67
Query: 80 L----NPAYSVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKS 135
NP Y W DQ ++S +LS ++G S ++W + F+ + ++
Sbjct: 68 TEAIPNPDYQAWFRSDQVVMS-------EDILSVVVGSKTSHEVWMNLAKHFNRISSSRI 120
Query: 136 TQLRTELRSETLGNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLIT 195
+L+ L S + +T+ E+L +K+I D L ++G P++ + + ++ GL +YE LIT
Sbjct: 121 FELQRRLHSLSKEGKTMEEYLRYLKTICDQLASVGSPVAEKMKIFAMVHGLTREYEPLIT 180
Query: 196 LIS---TRFEEHSIDELEALLLAKEARLGKYRTPSATGEISVNVALSNPQTPSSSAVSTQ 252
+ F S +++ L + RL Y + ++ N S
Sbjct: 181 SLEGTLDAFPGPSYEDVVYRLKNFDDRLQGYTVTDVSPHLAFNTFRS------------- 227
Query: 253 SASHTTSQGESQDSDPMDSYDSSGHGRGSSRGRGARGRGRGRSSI-------QCQLCYKF 305
+++G ++ G G S+RGRG + + SS CQ+C K
Sbjct: 228 -----SNRGRG-------GRNNRGKGNFSTRGRGFQQQFSSSSSSVSASEKPMCQICGKR 275
Query: 306 GHDVWQCYHRFNPNF 320
GH QC+HRF+ ++
Sbjct: 276 GHYALQCWHRFDDSY 290
>At1g36620 hypothetical protein
Length = 1152
Score = 445 bits (1144), Expect = e-125
Identities = 339/1143 (29%), Positives = 526/1143 (45%), Gaps = 136/1143 (11%)
Query: 81 NPAYSVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQTRAKSTQLRT 140
+P Y W + L+ WL +SL V + ++ +WE + + + ++ QL+
Sbjct: 78 SPDYPRWLQTNSMLVGWLYASLDPQVQKSISVVDNARVMWESLRTRYSVGNASRVHQLKY 137
Query: 141 ELRSETLGNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVILQGLPSDYEDLITLISTR 200
++ + +T + + ++K + D L DYE L+T R
Sbjct: 138 DIVACRQDGQTAANYFGKLKVMWDDL---------------------DDYEPLLTCCCNR 176
Query: 201 ---------FEEHSIDELEALLLAKEA-RLGKYRTPSATGEISVNVALSNPQTPSSSAVS 250
+ + + L+ +A + G RT + G +S + +S S
Sbjct: 177 PSCTHRVRQSQRRDHERIHQFLMGLDAAKFGTSRT-NILGRLSRDDNISLDSIYSEIIAE 235
Query: 251 TQSASHTTSQGESQDSDPMDSYDSSGHGRGSSRGRGARGR-GRGRSSIQCQLCYKFGHDV 309
+ + T S+ E D+ G G A R + C C + H
Sbjct: 236 ERHLTITRSKEERVDAV----------GFAVQTGVNAIASVTRVNNMGPCTHCGRSNHSA 285
Query: 310 WQCYHRFN-PNFVPQKPPQNSPQNSQWNSS-PQWHSNSQWSSTPQWNSQWSAPVSSPWQH 367
C+ P + +K S + SS P+ +S N+Q S P SS +
Sbjct: 286 DTCFKLHGVPEWYTEKYGDTSSGRGRGRSSTPRGRGRGHGNSYKANNAQTSHPSSSASEF 345
Query: 368 SSSQWPPRYPPAPSGYAPMASSPGVPYRGPAPSPMGYAQAHVAFQTSTSTPQATSPAQ-- 425
S PGV + + + T+TS+ + +
Sbjct: 346 SDI-------------------PGV-----SKEAWSAIRNLLKQDTATSSEKLSGKTNCV 381
Query: 426 SWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTLSSGLVLNNLLH 485
+ DSGASHH+T + + + + N + + G+ L + + L ++L
Sbjct: 382 DFLIDSGASHHMTGFLDLLTEIYEIP-HSVVVLPNAKHTIATKKGTLILGANMKLTHVLF 440
Query: 486 VPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKFHEFKLSH 545
VP ++ L+SV++ R+ F F C ++ + +SK+L+ ++G+Y H
Sbjct: 441 VPDLSCTLISVARLLRELHCFAIFTDKVCVIQDR-TSKMLIGVGTESNGVY--------H 491
Query: 546 LPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHPSLNVLRKALQF 605
L Q V TS + VV LWH RLGHPS VL L
Sbjct: 492 L--------QRAEVVATSAN-----------VVKWKTNKALWHMRLGHPSSKVLSSVLPS 532
Query: 606 CKIPVSNKMDVD-FCKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSSSGYLY 664
+ S D+ C CV K R S S + ++ D+WGP SS G Y
Sbjct: 533 LEDFDSCSSDLKTICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGPYKHASSCGAHY 592
Query: 665 YITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWGGEFRVFPNFL 724
++T +D +SR WI+L+ AKSE S QF A + Q N ++K ++++ G EF ++
Sbjct: 593 FLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSYF 652
Query: 725 KDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVYLINRL 784
+ GI H++ C +TH QNG VERKHRHI+++ SLL A +P+++W+ + TA YLINR
Sbjct: 653 AERGIVHQISCVYTHQQNGRVERKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRT 712
Query: 785 PTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGYSPSHR 844
PT L P L+ Q P Y L+VFG CF K R ++C+F+GY +
Sbjct: 713 PTPILDGKTPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQK 772
Query: 845 GYKCLASSGRI-YISKDVIFDEHTFPYPKLFAQNSNSPSL-SPAVVLPS--LPSVEHFSQ 900
G++ +I ++S+DV+F E FP FA N + SPA V+PS LP + F
Sbjct: 773 GWRIYDIESQIFFVSRDVVFQEDIFP----FADKKNKDTFSSPAAVIPSPILPYDDEFLD 828
Query: 901 -------------PAIAQPSSSLPSPFLPSPIASSDQNPSSTSPASAPATSEASAEIPSQ 947
PAI + S PS SPI ++ P++ SP E
Sbjct: 829 IYQIGDVPATNPLPAIIDVNDSPPS----SPIITA--TPAAASPPPLRRGLRQRQENVRL 882
Query: 948 VTIPTSSGQVSAPSSSGN-----VHPMITRSKNGIVQPRVQPTLLTVQL--EPTTVKQAL 1000
T S Q + + + ++PM I P Q L + + P T QA+
Sbjct: 883 KDYQTYSAQCESTQTLSDNIGTCIYPMANYVSGEIFSPSNQHFLAAISMVDPPQTYNQAI 942
Query: 1001 AHPQWLQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAK 1060
+W A+ E DAL+ TW + LP G +AIG KWVFR+K+N +GT+ +YKARLVA
Sbjct: 943 REKEWRNAVFFEVDALEDQGTWDITKLPQGVKAIGSKWVFRIKYNSNGTVERYKARLVAL 1002
Query: 1061 GFHQQPGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQP 1120
G HQ+ G D+T+TF+PV+K T+R++L +A W + Q+DV+NAFL+GDL E++YM+ P
Sbjct: 1003 GNHQKEGIDFTKTFAPVVKMQTVRLLLDVAAAKDWELHQMDVHNAFLHGDLKEDIYMKPP 1062
Query: 1121 QGFE-HDKKLVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVI 1179
GF+ D LVC+L K++YGLKQAPR WFEKL+++L++FGF SK D SLF + V+
Sbjct: 1063 PGFKTTDPSLVCKLKKSIYGLKQAPRCWFEKLSTSLLKFGFTQSKKDYSLFTSIRGSKVL 1122
Query: 1180 YVL 1182
+V+
Sbjct: 1123 HVI 1125
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 442 bits (1138), Expect = e-124
Identities = 331/1181 (28%), Positives = 539/1181 (45%), Gaps = 130/1181 (11%)
Query: 11 PPASPLPPHRFKLPSLSTYTISEKLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPRFV 70
P SP H P LS IS +L + + W + + A N V D +P
Sbjct: 61 PTQSPFFLHSADHPGLSI--ISHRLDETTYGDWSVAMRISLDAKNKLGFV-DGSLPRPLE 117
Query: 71 TERDRVAGTLNPAYSVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQ 130
++ P + +W + + SWL +S+S + ++ + +W + F+
Sbjct: 118 SD---------PNFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLT 168
Query: 131 TRAKSTQLRTELRSETLGNRTISEFLLQIKSI---IDSLFAIGDPISPREHLDVILQGLP 187
++ L E++ G ++SE+ +K++ +DS A+ DP + + + + +
Sbjct: 169 NLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWDQLDSTEALDDPCTCGKAVRLYQK--- 225
Query: 188 SDYEDLITLISTRFEEHSIDELEALLLAKEARLGKYRTPSATGEISVNVALSNPQTPSSS 247
++ ++ ++ E ++I + ++AK+A PS E+ + N Q +
Sbjct: 226 AEKAKIMKFLAGLNESYAI--VRRQIIAKKA------LPSLA-EVYHILDQDNSQKGFFN 276
Query: 248 AVSTQSASHTTSQGESQDSDPMDSYDSSGHGRGSSRGRGARGRGRGRSSIQCQLCYKFGH 307
V+ +A + S + P Y SG +G C C + GH
Sbjct: 277 VVAPPAAFQVSEVSHSPITSPEIMYVQSGPNKGRPT---------------CSFCNRVGH 321
Query: 308 DVWQCY--HRFNPNFVPQ-----KPPQNSPQNSQWNSSPQWHSNSQWSSTPQWNSQWSAP 360
+CY H F P F P+ KPP+ +Q SP + + ++
Sbjct: 322 IAERCYKKHGFPPGFTPKGKSSDKPPKPQAVAAQVTLSPDKMTGQLETLAGNFSPDQIQN 381
Query: 361 VSSPWQHSSSQWPPRY--PPAPSGYAPMASSPGVPYRGPAPSPMGYAQAHVAFQTSTSTP 418
+ + + SSQ P+ P S +SS V APS + ++ + F +
Sbjct: 382 LIALF---SSQLQPQIVSPQTASSQHEASSSQSV-----APSGILFSPSTYCFIGILAVS 433
Query: 419 QATSPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTLSSGL 478
+ + +W DSGA+HHV S + + Q + + + G + ISG+G+ ++ +
Sbjct: 434 HNSLSSDTWVIDSGATHHV-SHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDI 492
Query: 479 VLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADGLYKF 538
+L N+L +P NL+S+S D G F P C ++ L +G
Sbjct: 493 ILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGK--------- 543
Query: 539 HEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSV-VSSVCTANLWHFRLGHPSLN 597
++ +L V + P++ V++V ++WH RLGHPS +
Sbjct: 544 ---RIGNLYV---------------------LDTQSPAISVNAVVDVSVWHKRLGHPSFS 579
Query: 598 VLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPSPSP 657
L + +C C + K +L + S EL++ D+WGP
Sbjct: 580 RLDSLSEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVE 639
Query: 658 SSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWGGEF 717
+ GY Y++T +D +SR TWIYLLK+KS+ ++ F F E Q + ++K++++D E
Sbjct: 640 TVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKEL 699
Query: 718 RVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAFSTA 777
F F K GI CP T QN VVERKH+HI+++ +L+ +++ L YW TA
Sbjct: 700 -AFTEFYKAKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTA 758
Query: 778 VYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQECVFL 837
V+LINR P++ L P L ++PDY+ LK FGC C+ HK RS+ CVFL
Sbjct: 759 VFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFL 818
Query: 838 GYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQNSNSPSLSPAVVLPSLPSVE 896
GY +GYK L S ++IS++V F E FP A + S + + V P P
Sbjct: 819 GYPFGFKGYKLLDLESNVVHISRNVEFHEELFP----LASSQQSATTASDVFTPMDPL-- 872
Query: 897 HFSQPAIAQPSSSLPSPFLPSPIASSDQNPSSTSPASAPATSEASAEIPSQVTIPTSSGQ 956
S + + LPSP S S PA + + S
Sbjct: 873 ---------SSGNSITSHLPSPQISPSTQISKRRITKFPAHLQ---DYHCYFVNKDDSHP 920
Query: 957 VSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTVQLEPTTVKQALAHPQWLQAMQAEFDAL 1016
+S+ S + P N I + + P + +A +W A+ E A+
Sbjct: 921 ISSSLSYSQISPSHMLYINNISKIPI----------PQSYHEAKDSKEWCGAIDQEIGAM 970
Query: 1017 QKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYTETFSP 1076
++ TW + LPPG++A+GCKWVF VK + DG+L ++KAR+VAKG+ Q+ G DYTETFSP
Sbjct: 971 ERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSP 1030
Query: 1077 VIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFEHDK------KLV 1130
V K T++++L ++ + W + QLD++NAFLNGDL E +YM+ P G+ K +V
Sbjct: 1031 VAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVV 1090
Query: 1131 CRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFV 1171
CRL K++YGLKQA R WF K +++L+ GF D +LFV
Sbjct: 1091 CRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFV 1131
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 442 bits (1136), Expect = e-124
Identities = 342/1192 (28%), Positives = 548/1192 (45%), Gaps = 155/1192 (13%)
Query: 11 PPASPLPPHRFKLPSLSTYTISEKLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPRFV 70
P SP H P L+ IS +L + N+ W + + A N + P
Sbjct: 57 PTQSPFFLHSADHPGLNI--ISHRLDETNYGDWSVAMLISLDAKNKTGFIDGTLSRP--- 111
Query: 71 TERDRVAGTLNPAYSVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEKIHSFFHNQ 130
+ LN + +W + + SWL +S+S + ++ + +W ++S F+
Sbjct: 112 -----LESDLN--FRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDASDIWRDLNSRFNVT 164
Query: 131 TRAKSTQLRTELRSETLGNRTISEFLLQIKSI---IDSLFAIGDPISPREHLDVILQGLP 187
++ L E++ G ++SE+ ++K++ +DS A+ +P + + + + +
Sbjct: 165 NLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWDQLDSTEALDEPCTCGKAMRLQQK--- 221
Query: 188 SDYEDLITLISTRFEEHSIDELEALLLAKEARLGKYRTPSATGEISVNVALSNPQTPSSS 247
++ ++ ++ E ++I + ++AK+A PS GE+ + N Q S+
Sbjct: 222 AEQAKIVKFLAGLNESYAI--VRRQIIAKKA------LPSL-GEVYHILDQDNSQQSFSN 272
Query: 248 AVSTQSASHTTSQGESQDSDPMDSYDSSGHGRGSSRGRGARGRGRGRSSIQCQLCYKFGH 307
V+ +A + +S DP Y +G +G C + GH
Sbjct: 273 VVAPPAAFQVSEITQSPSMDPTVCYVQNGPNKGRPI---------------CSFYNRVGH 317
Query: 308 DVWQCY--HRFNPNFVP--------QKPPQ---NSPQNSQWNSSPQWHSNSQWSSTPQWN 354
+CY H F P F P QKP N ++S+ N+S + + + + +
Sbjct: 318 IAERCYKKHGFPPGFTPKGKAGEKLQKPKPLAANVAESSEVNTSLE---SMVGNLSKEQL 374
Query: 355 SQWSAPVSSPWQHSSSQWPPRYPPAPSGYAPMASSPGVPYRGPAPSPMGYAQAHVAFQTS 414
Q+ A SS Q++ PS YA ++S G SP Y+ F
Sbjct: 375 QQFIAMFSSQLQNTP----------PSTYATASTSQS-DNLGICFSPSTYS-----FIGI 418
Query: 415 TSTPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGIGSSTL 474
+ + T + +W DSGA+HHV S +++ + + + G + ISG+G+ L
Sbjct: 419 LTVARHTLSSATWVIDSGATHHV-SHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKL 477
Query: 475 SSGLVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGSVGADG 534
+ ++L N+L +P NL+S+S D G F C ++ ++L QG A+
Sbjct: 478 NDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVAN- 536
Query: 535 LYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWHFRLGHP 594
L L V +Q V++V ++WH RLGH
Sbjct: 537 --------LYLLDVG-----------------------DQSISVNAVVDISMWHRRLGHA 565
Query: 595 SLNVLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELVYSDLWGPS 654
SL L DFC C + K +L S +L++ D+WGP
Sbjct: 566 SLQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPF 625
Query: 655 PSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKALQTDWG 714
+ GY Y++T +D +SR TW+YLLK KSE ++ F F E Q K+KA+++D
Sbjct: 626 SVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNA 685
Query: 715 GEFRVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLTYWDFAF 774
E + F +F + GI CP T QN VVERKH+HI+++ +L+ + +PL+ W
Sbjct: 686 PELK-FTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCV 744
Query: 775 STAVYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLDFRSQEC 834
TAV+LINR P+ L P L P Y L+ FGC C+ P HK RS+ C
Sbjct: 745 LTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRAC 804
Query: 835 VFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQNSNSPSLSPAVVLPSLP 893
+FLGY ++GYK + S ++IS++V F E FP A+N S S S + P +P
Sbjct: 805 LFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFP----LAKNPGSES-SLKLFTPMVP 859
Query: 894 SVEHFSQPAIAQPSSSLPSPFLPSPIASSDQNPSSTSPASAPA--------TSEASAEIP 945
PSS LPS I+ SS PA T ++ + P
Sbjct: 860 VSSGIISDTTHSPSS------LPSQISDLPPQISSQRVRKPPAHLNDYHCNTMQSDHKYP 913
Query: 946 SQVTIPTSSGQVSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTVQLEPTTVKQALAHPQW 1005
+S+ S + P N I + + PT +A +W
Sbjct: 914 -----------ISSTISYSKISPSHMCYINNITKIPI----------PTNYAEAQDTKEW 952
Query: 1006 LQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQ 1065
+A+ AE A++K TW + LP G++A+GCKWVF +K DG L +YKARLVAKG+ Q+
Sbjct: 953 CEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQK 1012
Query: 1066 PGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFEH 1125
G DYT+TFSPV K TI+++L ++ + W ++QLDV+NAFLNG+L EE++M+ P+G+
Sbjct: 1013 EGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAE 1072
Query: 1126 DK------KLVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFV 1171
K +V RL +++YGLKQA R WF+K +S+L+ GF + D +LF+
Sbjct: 1073 RKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFL 1124
>At1g57640
Length = 1444
Score = 412 bits (1059), Expect = e-115
Identities = 338/1262 (26%), Positives = 536/1262 (41%), Gaps = 229/1262 (18%)
Query: 9 PPPPASPLPPHRFKLPSLSTYTISEKLSDRNFLLWKQQVEPIIKAHNLHVLVQDPEIPPR 68
PPPP S + R ++S Y ++ + + PI+K +N + R
Sbjct: 5 PPPPPSVIEVRR----TISPYDLTAADNSGAVIS-----HPILKTNNYEEWACGFKTALR 55
Query: 69 FVTERDRVAGTL------NPAYSVWESKDQYLLSWLQSSLSTPVLSRMIGCAHSFQLWEK 122
+ + GT+ +P W + + L+SW++ ++ + +L+ + + LWE+
Sbjct: 56 SRKKFGFLDGTIPQPLDGSPDLEDWLTINALLVSWMKMTIDSELLTNISHRDVARDLWEQ 115
Query: 123 IHSFFHNQTRAKSTQLRTELRSETLGNRTISEFLLQIKSIIDSLFAIGDPISPREHLDVI 182
I F K+ +++ +L T + + ++ L I D I+ L +
Sbjct: 116 IRKRFSVSNGPKNQKMKADLA-------TCKQEGMTVEGYYGKLNKIWDNINSYRPLRIC 168
Query: 183 LQGLPSDYEDLITLISTRFEEHSIDELEALLLAKEARLGKYRTPSATGEISVNVALSNPQ 242
G I + T E++ D++ L G T T S+ + P
Sbjct: 169 KCGR------CICNLGTDQEKYREDDMVHQYL-----YGLNETKFHTIRSSLTSRVPLPG 217
Query: 243 TPSSSAVSTQSASHTTSQGESQDSDPMDSYDSSGHGRGSSRGRGARGRGRGRSSIQCQLC 302
+ Q ++ +++ + ++ R + ++ C C
Sbjct: 218 LEEVYNIVRQEEDMVNNRSSNEERTDVTAFAVQMRPRSEVISEKFANSEKLQNKKLCTHC 277
Query: 303 YKFGHDVWQCYHRFNPNFVPQKPPQNSPQNSQWNSSPQWHSNSQWSSTPQWNSQWSAPVS 362
+ GH C+ P+W W P+ S +
Sbjct: 278 NRGGHSPENCFVLIG--------------------YPEW-----WGDRPRGKSNSNG--- 309
Query: 363 SPWQHSSSQWPPRYPPAPSGYAPMASSPGVPYRGPAPSPMGYAQAHVAFQTSTSTPQATS 422
S+S+ R+ P +G P + V GP PS HV + S A S
Sbjct: 310 -----STSRGRGRFGPGFNGGQPRPTYVNVVMTGPFPS-----SEHVNRVITDSDRDAVS 359
Query: 423 PAQ----------------------------------SWYPDSGASHHVTSESQNVHQFT 448
SW D+GASHH+T + +
Sbjct: 360 GLTDEQWRGVVKLLNAGRSDNKSNAHETQSGTCSLFTSWILDTGASHHMTGNLELLSDMR 419
Query: 449 PFAGQDQLFVGNGQGLPISGIGSSTLSSGLVLNNLLHVPSITKNLVSVSKFARDNGVFFE 508
+ + + + +S G+ L S L+L ++ +V + +L+SV + +N
Sbjct: 420 SMSPVLIILADGNKRVAVSE-GTVRLGSHLILKSVFYVKELESDLISVGQMMDENH---- 474
Query: 509 FHPYYCCVKSQASSKVLLQGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSG 568
CV + A VHTSV
Sbjct: 475 ------CVNAAA---------------------------------------VHTSVK--- 486
Query: 569 HAPVEQPSVVSSVCTANLWHFRLGHPS---LNVLRKALQFCKIPVSNKMDVDFCKACVMG 625
AP + LWH RLGH S +N+L + L + ++ + C C+
Sbjct: 487 -APFD------------LWHRRLGHASDKIVNLLPREL----LSSGKEILENVCDTCMRA 529
Query: 626 KSHRLPSSLSTTEYTSPLELVYSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKS 685
K R LS +L++ D+WGP +PS SG Y++T +D YSR W+YL+ KS
Sbjct: 530 KQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKS 589
Query: 686 EAISAFHQFKASSELQLNAKIKALQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVV 745
E F A E Q + +IK +++D G EF + GI H C T HQNG V
Sbjct: 590 ETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHETSCVGTPHQNGRV 649
Query: 746 ERKHRHIVDLGLSLLAHASIPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDY 805
ERKHRHI+++ +L + +P+ +W +A YLINR P+ LQ P L+K P Y
Sbjct: 650 ERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKY 709
Query: 806 TFLKVFGCTCFPLMRPYNSHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFD 864
+ L+VFG C+ + + K RS+ CVF+GY +G++ + ++S+DVIF
Sbjct: 710 SHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQ 769
Query: 865 EHTFPYPK----------------------------LFAQNSNSPSLSPAVVL-PSLPSV 895
E FPY K + +N ++ P V P +P +
Sbjct: 770 ETEFPYSKMSCNEEDERVLVDCVGPPFIEEAIGPRTIIGRNIGEATVGPNVATGPIIPEI 829
Query: 896 EHFSQPAIAQPSSSLPSPFL-PSPIASSDQNPSSTSPA-----SAPATSEASAEIPSQVT 949
S S S PFL S + ++D SST+PA + ++ ++ + VT
Sbjct: 830 NQESSSPSEFVSLSSLDPFLASSTVQTADLPLSSTTPAPIQLRRSSRQTQKPMKLKNFVT 889
Query: 950 IPTSSGQVSAPSSSGNVHPM--------ITRSKNGIVQPRVQPTLLTVQLEPTTVKQALA 1001
S +S +SS +++P+ T S + +T +EPTT +A+
Sbjct: 890 NTVSVESISPEASSSSLYPIEKYVDCHRFTSSHKAFL------AAVTAGMEPTTYNEAMV 943
Query: 1002 HPQWLQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKG 1061
W +AM AE ++L+ N+T+S+V LPPG+ A+G KWV+++K+ DG + +YKARLV G
Sbjct: 944 DKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLG 1003
Query: 1062 FHQQPGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQ 1121
Q+ G DY ETF+PV K T+R+ L +A W + Q+DV+NAFL+GDL EEVYM+ PQ
Sbjct: 1004 NCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQ 1063
Query: 1122 GFE-HDKKLVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVLSKKPLVIY 1180
GF+ D VCRLHK+LYGLKQAPR WF KL+SAL Q+GF S D SLF + + ++
Sbjct: 1064 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVH 1123
Query: 1181 VL 1182
VL
Sbjct: 1124 VL 1125
>At4g14460 retrovirus-related like polyprotein
Length = 1489
Score = 407 bits (1046), Expect = e-113
Identities = 279/858 (32%), Positives = 420/858 (48%), Gaps = 124/858 (14%)
Query: 352 QWNSQWSAPVSSPWQHSSSQWP-PRYPPAPSGYAPMASSPGVPYRGPAPSPMGYAQAHVA 410
Q SQ+ A V P +SS P P + G+ + S+ G P+ S + Y +
Sbjct: 406 QMISQFQAQVQVPEPAASSSNPSPLATVSEHGFMALTSTSGTIIPFPSTS-LKYENNDLK 464
Query: 411 FQTST-STPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVGNGQGLPISGI 469
FQ T S Q P+ +W DSGAS HV S+ + +G
Sbjct: 465 FQNHTLSALQKFLPSDAWIIDSGASSHVCSDLAMFRELKSVSG----------------- 507
Query: 470 GSSTLSSGLVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGS 529
+ ++ L+L+N+LHVP NL+SVS + F+ CC+ + S ++
Sbjct: 508 -TVHITQKLILHNVLHVPDFKFNLMSVSSLVKTISCSAHFY-VDCCLIQELSQGLM---- 561
Query: 530 VGADGLY-KFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWH 588
+G LY + + + S S P + SV + GH LWH
Sbjct: 562 IGRGRLYHNLYILETENTSPSTSTPAACLFT--GSVLNDGH----------------LWH 603
Query: 589 FRLGHPSLNVLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELVYS 648
RLGHPS VL+K + I +N ++P +LV+
Sbjct: 604 QRLGHPSSVVLQKLKRLAYISHNNLA-------------------------SNPFDLVHL 638
Query: 649 DLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKA 708
D+WGP S G+ Y++T +D +R TW+Y+L+ K + S F +F Q NAKIKA
Sbjct: 639 DIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRNKKDVSSVFPEFIKLVSTQFNAKIKA 698
Query: 709 LQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLT 768
+++D E F +K+ G+ H C +T QN VVERKH+HI+++ +LL ++IP+
Sbjct: 699 IRSDNAPELG-FTEIVKEHGMLHHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQ 757
Query: 769 YWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLD 828
YW +TAV+LINRLP+ L P + + PDY+ LK FGC CF + K
Sbjct: 758 YWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFT 817
Query: 829 FRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQNSNSPSLSPAV 887
R++ CVFLGY ++GYK L S + +S++V+F EH FP+ K + + + P
Sbjct: 818 PRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVFKEHVFPF-KTSELLNKAVDMFPNS 876
Query: 888 VLPSLPSVEHF--SQPAI-------------------AQPSSSLPSPFLPSPIASSDQNP 926
+LP LP+ HF + P I + SS+LPS PS +
Sbjct: 877 ILP-LPAPLHFVETMPLIDEDSLIPTTTDSRTADNHASSSSSALPSIIPPSSNTETQDID 935
Query: 927 SSTSPAS-APATSEASAE--------IPSQVTIPTSSGQV-----------SAPSSSGNV 966
S+ P + + T+ A + +PS T+P + + S+P +
Sbjct: 936 SNAVPITRSKRTTRAPSYLSEYHCSLVPSISTLPPTDSSIPIHPLPEIFTASSPKKT-TP 994
Query: 967 HPMITRSKNGIVQPRVQPTLLT--VQLEPTTVKQALAHPQWLQAMQAEFDALQKNKTWSL 1024
+P+ T P Q + + EP T QA+ +W++ E A++ NKTWS+
Sbjct: 995 YPISTVVSYDKYTPLCQSYIFAYNTETEPKTFSQAMKSEKWIRVAVEELQAMELNKTWSV 1054
Query: 1025 VPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYTETFSPVIKPVTIR 1084
LPP + +GCKWVF +K+NPDGT+ +YKARLVA+GF QQ G D+ +TFSPV K + +
Sbjct: 1055 ESLPPDKNVVGCKWVFTIKYNPDGTVERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAK 1114
Query: 1085 VILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQQPQGFEH------DKKLVCRLHKALY 1138
++L LA WT+ Q+DV++AFL+GDL EE++M PQG+ VCRL K++Y
Sbjct: 1115 MMLGLAAITGWTLTQMDVSDAFLHGDLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIY 1174
Query: 1139 GLKQAPRAWFEKLTSALV 1156
GLKQA R W+++ +ALV
Sbjct: 1175 GLKQASRQWYKRFVAALV 1192
>At2g16670 putative retroelement pol polyprotein
Length = 1333
Score = 407 bits (1045), Expect = e-113
Identities = 264/749 (35%), Positives = 380/749 (50%), Gaps = 75/749 (10%)
Query: 470 GSSTLSSGLVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKVLLQGS 529
G+ L S LV+ ++ +V +L+S+ + +N + + V+ + S V+ G
Sbjct: 305 GTVRLGSNLVMISVFYVEEFQSDLISIGQLMDENRCVLQMSDRFLVVQDRTSRMVMGAGR 364
Query: 530 -VGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTANLWH 588
VG FH F+ + + S++ V LWH
Sbjct: 365 RVGGT----FH-FRSTEIAASVT--------------------------VKEEKNYELWH 393
Query: 589 FRLGHPSLNVLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTEYTSPLELVYS 648
R+GHP+ V+ + + VS+ C C K R LS + EL+Y
Sbjct: 394 SRMGHPAARVV-SLIPESSVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYC 452
Query: 649 DLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLNAKIKA 708
DLWGP +PS +G Y++T ID YSR W+YLL KSEA F A ++ Q N KIK
Sbjct: 453 DLWGPYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKT 512
Query: 709 LQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHASIPLT 768
+++D G EF F ++ G+ H C T +N VERKHRH++++ +L A++P+
Sbjct: 513 VRSDNGTEFLCLTKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQ 572
Query: 769 YWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYNSHKLD 828
+W TA YLINR P+S L P +L K+ P + L+VFG C+ R K
Sbjct: 573 FWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFA 632
Query: 829 FRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQN---SNSPSLS 884
RS+ CVF+GY +G++ ++S+DV+F E FP+ QN +L
Sbjct: 633 ERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPFRISHEQNVIEEEEEALW 692
Query: 885 PAVVLPSLPSVEHFSQPAIAQPSSSLPSPFLPSPIAS----SDQNPSSTSPASAPATSEA 940
+V + H Q A P + SP PS +S S +P T PATS
Sbjct: 693 APIVDGLIEEEVHLGQNAGPTPPICVSSPISPSATSSRSEHSTSSPLDTEVVPTPATSTT 752
Query: 941 SAEIPSQVT----------IPTSSGQVSAPS-------SSGNVHPMITRSKNGIVQ---- 979
SA PS T PT++ V+ P+ S+ N P +T K+ +V
Sbjct: 753 SASSPSSPTNLQFLPLSRAKPTTAQAVAPPAVPPPRRQSTRNKAPPVT-LKDFVVNTTVC 811
Query: 980 ----PRVQPTLLTVQLEPTTVKQALAHPQWLQAMQAEFDALQKNKTWSLVPLPPGREAIG 1035
++ L +Q T + + +H ++ DA ++N TW++ LPPG+ AIG
Sbjct: 812 QESPSKLNSILYQLQKRDDTRRFSASHTTYV-----AIDAQEENHTWTIEDLPPGKRAIG 866
Query: 1036 CKWVFRVKHNPDGTLNKYKARLVAKGFHQQPGFDYTETFSPVIKPVTIRVILTLALTNHW 1095
+WV++VKHN DG++ +YKARLVA G Q+ G DY ETF+PV K T+R+ L +A+ +W
Sbjct: 867 SQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNW 926
Query: 1096 TIQQLDVNNAFLNGDLAEEVYMQQPQGFE--HDKKLVCRLHKALYGLKQAPRAWFEKLTS 1153
I Q+DV+NAFL+GDL EEVYM+ P GFE H K VCRL KALYGLKQAPR WFEKLT+
Sbjct: 927 EIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNK-VCRLRKALYGLKQAPRCWFEKLTT 985
Query: 1154 ALVQFGFVASKCDPSLFVLSKKPLVIYVL 1182
AL ++GF S D SLF L K + I +L
Sbjct: 986 ALKRYGFQQSLADYSLFTLVKGSVRIKIL 1014
>At1g70010 hypothetical protein
Length = 1315
Score = 402 bits (1033), Expect = e-112
Identities = 252/730 (34%), Positives = 367/730 (49%), Gaps = 57/730 (7%)
Query: 465 PISGIGSSTLSSGLVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQASSKV 524
PISG S L L+LN++L +P NL+SVS + G F C ++ +
Sbjct: 312 PISG--SVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELM 369
Query: 525 LLQGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSVCTA 584
+ G A+ LY + S H + V+SV +
Sbjct: 370 VGMGKQVAN-LYI------------------------VDLDSLSHPGTDSSITVASVTSH 404
Query: 585 NLWHFRLGHPSLNVLRKALQFCKIPVSNKMDVDF-CKACVMGKSHRLPSSLSTTEYTSPL 643
+LWH RLGHPS+ L+ P K + DF C+ C + K LP + + P
Sbjct: 405 DLWHKRLGHPSVQKLQPMSSLLSFP-KQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPF 463
Query: 644 ELVYSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASSELQLN 703
+L++ D WGP + GY Y++T +D YSR TW+YLL+ KS+ ++ F E Q
Sbjct: 464 DLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFE 523
Query: 704 AKIKALQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLSLLAHA 763
IK +++D E F F GI CP T QN VVERKH+HI+++ SL +
Sbjct: 524 TTIKGVRSDNAPELN-FTQFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQS 582
Query: 764 SIPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPLMRPYN 823
IP++YW TAVYLINRLP L+ P L K +P Y +KVFGC C+ P +
Sbjct: 583 HIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKD 642
Query: 824 SHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPY--PKLFAQNSNS 880
HK R++ C F+GY +GYK L + I +S+ V+F E FP+ L + N
Sbjct: 643 RHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNF 702
Query: 881 -PSLSPAVVLPSLPSVEHFSQPAIAQPSSSLPSPFLPSPIASSDQNPSSTSPASAPATSE 939
P L+P P ++ S + SS LPS NP++ P + TS
Sbjct: 703 FPDLNPT------PPMQRQSSDHVNPSDSSSSVEILPSA------NPTNNVPEPSVQTSH 750
Query: 940 ASAEIPSQVTIPTSSGQVSAPSSSGNVHPMITRSKNGIVQPRVQ-PTLLTVQLEPTTVKQ 998
A+ P+ + VS S+ + ++ + I P + L EP+ +
Sbjct: 751 RKAKKPAYLQDYYCHSVVS--STPHEIRKFLSYDR--INDPYLTFLACLDKTKEPSNYTE 806
Query: 999 ALAHPQWLQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTLNKYKARLV 1058
A W AM AEFD L+ TW + LP + IGC+W+F++K+N DG++ +YKARLV
Sbjct: 807 AEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLV 866
Query: 1059 AKGFHQQPGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGDLAEEVYMQ 1118
A+G+ Q+ G DY ETFSPV K +++++L +A ++ QLD++NAFLNGDL EE+YM+
Sbjct: 867 AQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMR 926
Query: 1119 QPQGFEHDK------KLVCRLHKALYGLKQAPRAWFEKLTSALVQFGFVASKCDPSLFVL 1172
PQG+ + VCRL K+LYGLKQA R W+ K +S L+ GF+ S CD + F+
Sbjct: 927 LPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLK 986
Query: 1173 SKKPLVIYVL 1182
+ + VL
Sbjct: 987 ISDGIFLCVL 996
>At1g26990 polyprotein, putative
Length = 1436
Score = 360 bits (923), Expect = 3e-99
Identities = 243/733 (33%), Positives = 359/733 (48%), Gaps = 60/733 (8%)
Query: 404 YAQAHVAFQTSTSTPQATSPAQSWYPDSGASHHVTSESQNVHQFTPFAGQDQLFVG--NG 461
Y + TS+ + ++W DSGASHHVT E H + D+ FV NG
Sbjct: 398 YDSTYYEMLTSSIPIETELSLRAWVIDSGASHHVTHERNLYHTYKAL---DRTFVRLPNG 454
Query: 462 QGLPISGIGSSTLSSGLVLNNLLHVPSITKNLVSVSKFARDNGVFFEFHPYYCCVKSQAS 521
+ I G G L+ L L+N+L +P NL+SVS + F C + QA
Sbjct: 455 HTVKIEGTGFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMI--QAL 512
Query: 522 SKVLLQGSVGADGLYKFHEFKLSHLPVSLSAPVQHPVSVHTSVSSSGHAPVEQPSVVSSV 581
+K L+ G G S + VS S P + SV +SV +
Sbjct: 513 TKELMLGKGSQVGNLYILNLDKSLVDVS-SFPGK---SVCSSVKNE-------------- 554
Query: 582 CTANLWHFRLGHPS---LNVLRKALQFCKIPVSNKMDVDFCKACVMGKSHRLPSSLSTTE 638
+ +WH RLGHPS ++ L L K ++ D C C + K LP
Sbjct: 555 --SEMWHKRLGHPSFAKIDTLSDVLMLPKQKINK--DSSHCHVCHLSKQKHLPFKSVNHI 610
Query: 639 YTSPLELVYSDLWGPSPSPSSSGYLYYITFIDAYSRYTWIYLLKAKSEAISAFHQFKASS 698
ELV+ D WGP P+ Y Y++T +D +SR TWIYLLK KS+ ++ F F
Sbjct: 611 REKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMV 670
Query: 699 ELQLNAKIKALQTDWGGEFRVFPNFLKDFGIHHRLICPHTHHQNGVVERKHRHIVDLGLS 758
E Q + K+ ++++D E + F K+ GI CP T QN VVERKH+H++++ +
Sbjct: 671 ETQYHTKVCSVRSDNAHELKFNELFAKE-GIKADHPCPETPEQNFVVERKHQHLLNVARA 729
Query: 759 LLAHASIPLTYWDFAFSTAVYLINRLPTSSLQFDIPLYKLFKQIPDYTFLKVFGCTCFPL 818
L+ + IPL YW TAV+LINRL + + + P +L K PDY+ LK FGC C+
Sbjct: 730 LMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCYCS 789
Query: 819 MRPYNSHKLDFRSQECVFLGYSPSHRGYKCL-ASSGRIYISKDVIFDEHTFPYPKLFAQN 877
P + K D R++ C+FLGY ++GYK L + + IS+ VIF E FP+ +
Sbjct: 790 TSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFPFASSNITD 849
Query: 878 SNSPSLSPAVVLPSLPSVEHFSQPAIAQPSSSLPSPFLPSPIASSDQNPSSTSPASAPAT 937
+ + P + LP+ + EH + Q SS P + D++ S S P
Sbjct: 850 A-AKDFFPHIYLPAPNNDEHL---PLVQSSSDAPH--------NHDESSSMIFVPSEP-K 896
Query: 938 SEASAEIPSQV-------TIPTSSGQVSAPSSSGNVHPMITRSKNGIVQPRVQPTLLTVQ 990
S ++PS + PT++ P ++ + ++ + ++T
Sbjct: 897 STRQRKLPSHLQDFHCYNNTPTTTKTSPYPLTNYISYSYLSEPFGAFI------NIITAT 950
Query: 991 LEPTTVKQALAHPQWLQAMQAEFDALQKNKTWSLVPLPPGREAIGCKWVFRVKHNPDGTL 1050
P +A W AM E A + TWS+ LP G+ A+GCKW+ +K DG++
Sbjct: 951 KLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGSI 1010
Query: 1051 NKYKARLVAKGFHQQPGFDYTETFSPVIKPVTIRVILTLALTNHWTIQQLDVNNAFLNGD 1110
++KARLVAKG+ QQ G D+ TFSPV K VT++V+L+LA W + QLD++NA LNGD
Sbjct: 1011 ERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNGD 1070
Query: 1111 LAEEVYMQQPQGF 1123
L EE+YM+ P G+
Sbjct: 1071 LEEEIYMKLPPGY 1083
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.317 0.132 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,234,768
Number of Sequences: 26719
Number of extensions: 1403232
Number of successful extensions: 13913
Number of sequences better than 10.0: 423
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 8760
Number of HSP's gapped (non-prelim): 3745
length of query: 1182
length of database: 11,318,596
effective HSP length: 110
effective length of query: 1072
effective length of database: 8,379,506
effective search space: 8982830432
effective search space used: 8982830432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0336.1