BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.5
(504 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60590 polygalacturonase like protein 623 e-179
At1g10640 similar to polygalacturonase-like protein 537 e-153
At5g14650 polygalacturonase - like protein 478 e-135
At1g02460 polygalacturonase PG1, putative 348 4e-96
At1g48100 polygalacturonase PG1, putative 346 2e-95
At3g26610 polygalacturonase, putative 334 6e-92
At1g56710 polygalacturonase, putative 314 8e-86
At4g01890 putative polygalacturonidase 301 7e-82
At1g70500 putative polygalacturonase 256 2e-68
At1g23460 putative polygalacturonase precursor 251 9e-67
At1g80170 putative polygalacturonase 239 3e-63
At2g41850 polygalacturonase like protein 219 3e-57
At3g57510 endo-polygalacturonase 210 2e-54
At3g07970 putative polygalacturonase 204 1e-52
At5g44840 polygalacturonase 199 2e-51
At4g35670 putative polygalacturonase 191 8e-49
At1g78400 similar to exopolygalacturonase precursor sp|Q00293|PG... 171 1e-42
At1g43080 hypothetical protein 168 7e-42
At1g43100 hypothetical protein 167 1e-41
At1g43090 hypothetical protein 167 1e-41
>At1g60590 polygalacturonase like protein
Length = 474
Score = 623 bits (1606), Expect = e-179
Identities = 302/477 (63%), Positives = 366/477 (76%), Gaps = 46/477 (9%)
Query: 69 SSHSKPKPPPPTH--KKTPSSPLF---------PKPKVDPPSTP----PSNDYNGGSSTM 113
S SKPKP T K SP+ P P V PP TP P D S
Sbjct: 2 SHKSKPKPKMKTQPPKSNDGSPVVSQPPQVQQPPPPHVQPPPTPLPLQPVED-----SQQ 56
Query: 114 FNVLDFGAKGDGRTDDTKAFQATCAMACKVEASTMVVPAAYVFYVGPISFSGPYCKPNIV 173
FNVLDFGAKGDG +DDT+AF+A A ACKVEASTM++P Y+F VGPISFSGPYC+ NIV
Sbjct: 57 FNVLDFGAKGDGMSDDTQAFEAAWASACKVEASTMIIPPDYIFLVGPISFSGPYCQANIV 116
Query: 174 FQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQGKGVIDGRGSVWWQ-DFPYDDPIDD 232
FQL+G I+APT++ +WGGGL+ W+EF+KL GITIQG GVIDGRG+VWWQ D+ D PIDD
Sbjct: 117 FQLEGMIVAPTDTESWGGGLMWWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSDYPIDD 176
Query: 233 EEKLIVPLNHT--QKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQCHLK 290
+ KLIVPLN++ ++P +P+++E+ +MP++KPTALRFYGS TVTGITIQNSPQCHLK
Sbjct: 177 DFKLIVPLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQNSPQCHLK 236
Query: 291 FDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMACG---------------- 334
FDNC VLVHDV++SSPGDSPNTDGIHLQN++DV+IH++ +ACG
Sbjct: 237 FDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYVH 296
Query: 335 -------HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSN 387
HGISIGSLGKD+T+ACVSNIT+RDV MHNTM GVRIKTWQGG GSV+G+LFSN
Sbjct: 297 NVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFSN 356
Query: 388 IQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGTYTVKPVHFACSDSLPCVD 447
IQ++EVQLPIVIDQFYCD C NHTSAV++ G+ YE I+GTYTVKPVHFACSDS PC+D
Sbjct: 357 IQLTEVQLPIVIDQFYCDHSKCMNHTSAVSVEGVTYEKIRGTYTVKPVHFACSDSFPCID 416
Query: 448 VSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPPIDCIQIGKPSSNRIQTNHDIC 504
V L+ +ELKPVQ QYH+Y+PFCW+T+G+L + T PPIDC+QIGKP+ N + ++HDIC
Sbjct: 417 VQLSGIELKPVQLQYHMYDPFCWKTFGELNSATVPPIDCLQIGKPARNGVHSDHDIC 473
>At1g10640 similar to polygalacturonase-like protein
Length = 380
Score = 537 bits (1384), Expect = e-153
Identities = 250/383 (65%), Positives = 308/383 (80%), Gaps = 29/383 (7%)
Query: 148 MVVPAAYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITI 207
M+VP Y + VGPISFSGPYC+ NIVFQLDGTIIAPT+S WG GL+ W++F+KL GI +
Sbjct: 1 MLVPPEYTYLVGPISFSGPYCQANIVFQLDGTIIAPTDSKTWGKGLMWWIDFTKLKGIKV 60
Query: 208 QGKGVIDGRGSVWWQ-DFPYDDPIDDEEKLIVPLNHT--QKPSLPVQNEMGRQMPAVKPT 264
QGKGVIDGRGS WWQ D P+ ID + KLIVPLN++ Q P +P+++E+ +MP++KPT
Sbjct: 61 QGKGVIDGRGSGWWQQDSPF---IDSDTKLIVPLNNSANQNPPMPIRSELDERMPSIKPT 117
Query: 265 ALRFYGSFSPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDV 324
ALRF GSF VTGITIQNSPQCHLKFD+C GV+VHD+++SSPGDSPNTDGIHLQN+KDV
Sbjct: 118 ALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDV 177
Query: 325 LIHSSKMACG-----------------------HGISIGSLGKDNTRACVSNITIRDVNM 361
LIHS+ +ACG HGISIGSLGK+ T+ACVSNIT+RDV M
Sbjct: 178 LIHSTTLACGDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAM 237
Query: 362 HNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGI 421
HNTM GVRIKTWQGG GSV+G++FSNIQ+++VQ+PI I+QFYCD C N TSAVA+ G+
Sbjct: 238 HNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSKCKNQTSAVAVEGV 297
Query: 422 NYEGIKGTYTVKPVHFACSDSLPCVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTT 481
YE IKGTYTVKPVHFACSD+ PCVDV L+S+ELKPVQE+Y +Y+ +CWQT+G+L TPT
Sbjct: 298 TYERIKGTYTVKPVHFACSDNFPCVDVQLSSIELKPVQEKYRMYDAYCWQTFGELNTPTL 357
Query: 482 PPIDCIQIGKPSSNRIQTNHDIC 504
PPIDC++IGKP N++Q++HD+C
Sbjct: 358 PPIDCLKIGKPPRNKVQSDHDVC 380
>At5g14650 polygalacturonase - like protein
Length = 435
Score = 478 bits (1230), Expect = e-135
Identities = 239/420 (56%), Positives = 285/420 (66%), Gaps = 52/420 (12%)
Query: 108 GGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVEASTMVVPAAYVFYVGPISFSGPY 167
GGSS NVLD GAKGDG +DDTKAF+ +ACKV AST++VP+ F VGP+SF G
Sbjct: 45 GGSSGTINVLDHGAKGDGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLVGPVSFLGKE 104
Query: 168 CKPNIVFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYD 227
CK IVFQL+G IIAPT+++AWG GLLQW+EF L GITI+GKG+IDGRGSVWW D
Sbjct: 105 CKEKIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGSVWWNDM--- 161
Query: 228 DPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQC 287
MG +MP KPTALRFYGS TV+GITIQNSPQ
Sbjct: 162 --------------------------MGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQT 195
Query: 288 HLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMACG------------- 334
HLKFDNC + V D + SSPGDSPNTDGIHLQNS+D +I+ S +ACG
Sbjct: 196 HLKFDNCISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNI 255
Query: 335 ----------HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGSVQGVL 384
HGISIG LGKDNT+ACVSNIT+RDV MH T NGVRIK+WQGGSGSV+ V+
Sbjct: 256 NIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVM 315
Query: 385 FSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGTYTVKPVHFACSDSLP 444
FSNIQVS V PI+IDQ+YCD C N TSAVA++ INY IKGTYT +PV FACSDSLP
Sbjct: 316 FSNIQVSNVANPIIIDQYYCDGGGCHNETSAVAVSNINYINIKGTYTKEPVRFACSDSLP 375
Query: 445 CVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPPIDCIQIGKPSSNRIQTNHDIC 504
C +SL+++ELKP + +PFCW+ +G+L T T PPI C++ K ++N+D C
Sbjct: 376 CTGISLSTIELKPATGKASSLDPFCWKAHGELKTKTLPPIQCLKTEKSPEAASRSNNDAC 435
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 4 MSGLSFRFFSYMLLIVLLIWSSNFETCIARRGKHWRQSRTVSASLFKKKGNSHGNSH-NQ 62
M L+ + S L+++ ++SS F TC AR +W+ +R A +G S G +
Sbjct: 1 MCRLTLKCLSLNFLLLISLFSSRFGTCDARYSVYWKGNRRSIA-----EGGSSGTINVLD 55
Query: 63 HG--GGGSSSHSK 73
HG G G+S +K
Sbjct: 56 HGAKGDGTSDDTK 68
>At1g02460 polygalacturonase PG1, putative
Length = 491
Score = 348 bits (893), Expect = 4e-96
Identities = 202/480 (42%), Positives = 271/480 (56%), Gaps = 73/480 (15%)
Query: 51 KKGNSHGNSHNQHGGGGSSSHSKPKPP------PPTHKKTPSSPLFPKPKVDP-PSTPPS 103
K+ + H N+HN H SKPKPP PPT P P P P + P PS P+
Sbjct: 33 KEKHKH-NNHNHHS-------SKPKPPSSSISQPPT--PPPGPPDSPAPSLPPSPSDDPA 82
Query: 104 NDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVEAST---MVVPAAYVFYVGP 160
+D NG ++NV +GA GDG TDDT+AF+ +C E +T ++VP Y F +
Sbjct: 83 DDNNG----IYNVRKYGAVGDGETDDTEAFKTAWDSSCNNENNTDSVLLVPYGYTFMIQS 138
Query: 161 ISFSGPYCKPNIVFQLDGTIIAPTNSNAWGGGLL--QWLEFSKLVGITIQGKGVIDGRGS 218
F+GP C+ FQ+DGTI+ P +W + QWL F ++ G+ ++G+GVIDGRG
Sbjct: 139 TIFTGP-CRSYQFFQVDGTIVTPDGPESWPSNISKRQWLVFYRVNGMALKGEGVIDGRGQ 197
Query: 219 VWWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTG 278
WW D P KP V P P ALRF+ S + V G
Sbjct: 198 KWW-DLPC------------------KPHRSVNKSAIVTGPCDSPIALRFFMSSNLRVEG 238
Query: 279 ITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSS--------- 329
+ I+NSPQ H +FD C GV V + I++P SPNTDGIH++NS V I++S
Sbjct: 239 LQIKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCV 298
Query: 330 ------------KMACG---HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQ 374
+ CG HGISIGSLG N+RACVSNIT+RD + + NGVRIKTWQ
Sbjct: 299 SIGSGSYDVDIRNLTCGPGGHGISIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQ 358
Query: 375 GGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGTYTVK- 433
GGSGSV GV F+NI V V+ PI+IDQ+YC + C N TSAV ++ I Y+GIKGTY ++
Sbjct: 359 GGSGSVSGVTFNNIHVDSVRNPIIIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRS 418
Query: 434 -PVHFACSDSLPCVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPPIDCIQIGKP 492
P+HF CSD++PC +++L+ +EL P + + L +PFCW YG + PP+ C+ P
Sbjct: 419 PPMHFGCSDAVPCTNLTLSDIELLPAKGEIVL-DPFCWNAYGIAEELSIPPVWCLMSDPP 477
>At1g48100 polygalacturonase PG1, putative
Length = 475
Score = 346 bits (888), Expect = 2e-95
Identities = 197/481 (40%), Positives = 262/481 (53%), Gaps = 62/481 (12%)
Query: 44 VSASLFKKKGNSHGNSHNQHGGGGSSSHSKPKPPPP---THKKTPSSPLFPKPKVDPPST 100
+S LF N ++ H G +H P PPPP T P P P DP
Sbjct: 13 ISTVLFGHFTNVARARYHYHKGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDP--A 70
Query: 101 PPSNDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVEASTMVVPAAYVFYVGP 160
P +D S +F+V FGA GDG DDT AFQ AC VE+ ++ P VF +
Sbjct: 71 PGDSD----SGCVFDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITS 126
Query: 161 ISFSGPYCKPNIVFQLDGTIIAPTNSNAWG--GGLLQWLEFSKLVGITIQGKGVIDGRGS 218
FSGP CKP +VFQLDG ++ P W QWL F +L G T GKG ++G G
Sbjct: 127 TIFSGP-CKPGLVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQ 185
Query: 219 VWWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQM--PAVKPTALRFYGSFSPTV 276
WW P P + G P PT +RF+ S + V
Sbjct: 186 KWWD----------------------LPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEV 223
Query: 277 TGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMA---- 332
G+ IQNSPQ H+KFD C GVL++++ ISSP SPNTDGIHL N++ V I++S ++
Sbjct: 224 KGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDD 283
Query: 333 -----------------CG--HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTW 373
CG HGISIGSLG N++ACVSNIT+R+ + ++ NG+R+KTW
Sbjct: 284 CISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTW 343
Query: 374 QGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGTYTVK 433
QGG+GSV +LF NIQ+ V I++DQ+YC + C N TSAV + + Y IKGTY V+
Sbjct: 344 QGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNETSAVKVFDVEYRNIKGTYDVR 403
Query: 434 --PVHFACSDSLPCVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPPIDCIQIGK 491
P+HFACSD++ C +++++ VEL P +E + +PFCW YG+ T T PPIDC+ G
Sbjct: 404 SPPIHFACSDTVACTNITMSEVELLP-EEGELVDDPFCWNAYGKQETLTIPPIDCLLDGS 462
Query: 492 P 492
P
Sbjct: 463 P 463
>At3g26610 polygalacturonase, putative
Length = 470
Score = 334 bits (857), Expect = 6e-92
Identities = 173/418 (41%), Positives = 240/418 (57%), Gaps = 53/418 (12%)
Query: 94 KVDPPSTPPSNDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVEASTMVVPAA 153
K P +P Y + +FN+ +GAKGDG +DD+KA ACKV + +PA
Sbjct: 47 KNTPTGSPAPAPYPSTNEGVFNIFSYGAKGDGVSDDSKALVGAWKAACKVVGGKVEIPAG 106
Query: 154 YVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNSNAW-GGGLLQWLEFSKLVGITIQGKGV 212
F V ++ GP CK V Q++G ++AP +W L QWL F + +TIQG G
Sbjct: 107 TQFLVKAVTLQGP-CKEETVVQIEGILVAPEKIGSWPNSSLFQWLNFKWVSHLTIQGSGT 165
Query: 213 IDGRGSVWWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSF 272
++GRG WW Y + +P +KPTALRFY S
Sbjct: 166 LNGRGYNWWNLDTYQT-----------------------QTRNKYIPPMKPTALRFYSSN 202
Query: 273 SPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMA 332
+ TV I+I NSP CHLKFD+ +GV V++++ISSP +SPNTDGIHLQN+++V I S +A
Sbjct: 203 NVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIHLQNTRNVEIQHSNIA 262
Query: 333 CG-----------------------HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVR 369
CG HGISIG LGKD + ACVS+I + D+++ NT+ GVR
Sbjct: 263 CGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVACVSDIIVEDISIQNTLAGVR 322
Query: 370 IKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGT 429
IKTWQGG G V+ + FSNIQV +V++PIVIDQ+YCDK C N T AV+++G+ Y I G+
Sbjct: 323 IKTWQGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSKCKNQTRAVSISGVKYNNIVGS 382
Query: 430 YTVKPVHFACSDSLPCVDVSLTSVELKPV-----QEQYHLYEPFCWQTYGQLMTPTTP 482
+TV+PV ACS+++PC+DV L + L+P + + + CW +YG+ P P
Sbjct: 383 FTVQPVRIACSNNVPCMDVDLMDIRLRPSGGIRGLQTHQQQQALCWNSYGKTQGPLVP 440
>At1g56710 polygalacturonase, putative
Length = 434
Score = 314 bits (804), Expect = 8e-86
Identities = 175/425 (41%), Positives = 244/425 (57%), Gaps = 52/425 (12%)
Query: 97 PPSTPPSNDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKV---EASTMVVPAA 153
P P ND + + T+F+V FGA GD TDDT AF+ AC +++ ++VP
Sbjct: 31 PAPNPAYNDNDNIAPTVFDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKSALLLVPYT 90
Query: 154 YVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNSNAWGGGLL-QWLEFSKLVGITIQGKGV 212
+ F V P +F+GP C+ N+V Q+DG I++P +W QW+ F ++ G++IQG GV
Sbjct: 91 FCFLVKPTTFNGP-CRTNLVLQIDGFIVSPDGPRSWPSNYQRQWMMFYRVNGLSIQGSGV 149
Query: 213 IDGRGSVWWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSF 272
I+GRG WW N KP + N + P P A+R + S
Sbjct: 150 INGRGQKWW-------------------NLPCKPHKGL-NGTTQTGPCDSPVAIRLFQSS 189
Query: 273 SPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMA 332
+ GI NS Q H++FDNC+ V+V V I +P SPNTDGIH++N+ +V I +S ++
Sbjct: 190 KVRIQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPASSPNTDGIHIENTHNVQIRNSMIS 249
Query: 333 ---------------------CG--HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVR 369
CG HGISIGSLG N++A VSNIT+ + + N+ NGVR
Sbjct: 250 NGDDCISIGAGCFNVDIKNVTCGPSHGISIGSLGVHNSQAYVSNITVTNSTIWNSDNGVR 309
Query: 370 IKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGT 429
IKTWQGGSGSV ++FSNI + V+ PI+IDQ+YC +C N TSAV ++ + Y IKGT
Sbjct: 310 IKTWQGGSGSVSRIVFSNILMVNVRNPIMIDQYYCQTNNCANQTSAVIISDVLYANIKGT 369
Query: 430 YTVK--PVHFACSDSLPCVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPPIDCI 487
Y ++ P+HF CSDS+PC +++LT V+L P + Q HL PFCW YG M T PP+ C+
Sbjct: 370 YDLRSPPIHFGCSDSVPCTNLTLTEVDLFPSKGQ-HLENPFCWNAYGS-MKITVPPVYCL 427
Query: 488 QIGKP 492
P
Sbjct: 428 LDAPP 432
>At4g01890 putative polygalacturonidase
Length = 452
Score = 301 bits (770), Expect = 7e-82
Identities = 172/441 (39%), Positives = 238/441 (53%), Gaps = 69/441 (15%)
Query: 86 SSPLFPKPKVDPPSTPPSNDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVE- 144
S P P P + PS PS + +++V +GA G+G DDT +F+ AC
Sbjct: 37 SQPPSPSPNPNDPSKSPSRSQDLDHEVVYDVRKYGAVGNGVADDTVSFKTAWDSACSNNK 96
Query: 145 ---ASTMVVPAAYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNSNAWGGGL--LQWLEF 199
AS + VP + F + F+GP C+ FQ+DGTI+ +W L QWL F
Sbjct: 97 NNTASVLHVPYGFTFMIRSTIFTGP-CRSYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAF 155
Query: 200 SKLVGITIQGKGVIDGRGSVWWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMP 259
++ G+ +QG GVIDGRG WW +P
Sbjct: 156 YRINGMALQGAGVIDGRGQNWWD-----------------------------------LP 180
Query: 260 AVKPTALRFYGSFSPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQ 319
ALRF+ S + V G++I+NSPQ HLK D C+ V ++ + I SP SPNTDGIH++
Sbjct: 181 CKPHQALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIISPPASPNTDGIHIE 240
Query: 320 NSKDVLIHSS---------------------KMACG---HGISIGSLGKDNTRACVSNIT 355
NS V I++S + CG HGISIGSLG+ N+ ACVSN+T
Sbjct: 241 NSNSVEIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGISIGSLGEKNSHACVSNVT 300
Query: 356 IRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRSCTNHTSA 415
+RD + + NGVRIKTWQGGSGSV GV F NI V V+ PI+IDQ+YC +SC N TSA
Sbjct: 301 VRDSFIKFSENGVRIKTWQGGSGSVSGVTFDNIHVDTVRNPIIIDQYYCTTKSCANKTSA 360
Query: 416 VALAGINYEGIKGTYTVK--PVHFACSDSLPCVDVSLTSVELKPVQEQYHLYEPFCWQTY 473
V + I Y+ IKGTY ++ P+HF CS+++PC +++L+++EL P +E + PFCW Y
Sbjct: 361 VFVNDIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSNIELLPSKEDI-VVGPFCWNAY 419
Query: 474 GQLMTPTTPPIDCIQIGKPSS 494
G + P I C++ +S
Sbjct: 420 GITDEFSVPLISCLKSNPSTS 440
>At1g70500 putative polygalacturonase
Length = 468
Score = 256 bits (654), Expect = 2e-68
Identities = 153/412 (37%), Positives = 213/412 (51%), Gaps = 60/412 (14%)
Query: 103 SNDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVEASTMVVPAAYVFYVGPIS 162
++ Y+G + NV F A GDG +DDT+AF MAC S ++VP + V
Sbjct: 58 TSQYSG--KNLVNVDSFNASGDGVSDDTQAFIRAWTMACSAPNSVLLVPQGRSYLVNATK 115
Query: 163 FSGPYCKPNIVFQLDGTIIAPTNSNAWGGGLLQ-WLEFSKLVGITIQGKGVIDGRGSVWW 221
F GP C+ ++ Q+DGTIIAP + W + WL+FSKL G+ QG GVIDG G+ WW
Sbjct: 116 FDGP-CQEKLIIQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGVIDGSGTKWW 174
Query: 222 QDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAV-KPTALRFYGSFSPTVTGIT 280
+ + P V PTAL Y S + V G+T
Sbjct: 175 A---------------------------ASCKKNKSNPCVGAPTALTIYSSSNVYVRGLT 207
Query: 281 IQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMACG------ 334
I+NS Q HL V + V ++SPGDSPNTDGIH+ S DV++ SK++ G
Sbjct: 208 IRNSQQMHLIIQRSTTVRISRVMVTSPGDSPNTDGIHITASTDVVVQDSKISTGDDCVSI 267
Query: 335 -----------------HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGS 377
HGISIGSLG+ +++ V+ + + + NT NG+RIKTWQGG+
Sbjct: 268 VNGSAKIKMKRIYCGPGHGISIGSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTWQGGN 327
Query: 378 GSVQGVLFSNIQVSEVQLPIVIDQFYCDKRS-CTNHTSAVALAGINYEGIKG-TYTVKPV 435
G V+GV F N+ + +V PI+IDQFYCD S C N TSAV ++ I Y I G T + K +
Sbjct: 328 GYVKGVRFENVVMQDVANPIIIDQFYCDSPSTCQNQTSAVHISEIMYRNITGTTKSSKAI 387
Query: 436 HFACSDSLPCVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPPIDCI 487
+F CSD++PC + L ++ L+ + E +C G P DC+
Sbjct: 388 NFKCSDAVPCSHIVLNNINLEGNDGK---VEAYCNSAEGFGYGVVHPSADCL 436
>At1g23460 putative polygalacturonase precursor
Length = 457
Score = 251 bits (640), Expect = 9e-67
Identities = 155/417 (37%), Positives = 206/417 (49%), Gaps = 68/417 (16%)
Query: 102 PSNDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVEASTMVVPAAYVFYVGPI 161
PS + NV FGA GDG +DDT+AF + + AC S +VP + V
Sbjct: 54 PSFTSRHSGKNLVNVDTFGAAGDGVSDDTQAFVSAWSKACSTSKSVFLVPEGRRYLVNAT 113
Query: 162 SFSGPYCKPNIVFQ-----LDGTIIAPTNSNAWGGGLLQ-WLEFSKLVGITIQGKGVIDG 215
F+GP C+ ++ Q +DGTI+AP + W + WLEFSKL G+ QGKGVIDG
Sbjct: 114 KFNGP-CEQKLIIQVKLSSIDGTIVAPDEPSNWDSKFQRIWLEFSKLKGVVFQGKGVIDG 172
Query: 216 RGSVWWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPT 275
GS WW K AL S
Sbjct: 173 SGSKWW---------------------------------AASCKKNKSNALTIESSSGVK 199
Query: 276 VTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMAC-- 333
V+G+TIQNS Q + + V V V +SSPGDSPNTDGIH+ S +V++ K+
Sbjct: 200 VSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGD 259
Query: 334 ---------------------GHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKT 372
GHGISIGSLGKDNT V+ + + + T NG+RIKT
Sbjct: 260 DCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKT 319
Query: 373 WQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDK-RSCTNHTSAVALAGINYEGIKG-TY 430
+QGGSG VQG+ F+N+++ +V PI+IDQFYCD +C N TSAV ++ I Y I G T
Sbjct: 320 YQGGSGYVQGIRFTNVEMQDVANPILIDQFYCDSPTTCQNQTSAVKISQIMYRNITGTTK 379
Query: 431 TVKPVHFACSDSLPCVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPPIDCI 487
+ K + FACSD++PC + L +V L+ Q E +C G P DC+
Sbjct: 380 SAKAIKFACSDTVPCSHIVLNNVNLEGNDGQ---VEAYCNSAEGFGYGVIHPSADCL 433
>At1g80170 putative polygalacturonase
Length = 444
Score = 239 bits (610), Expect = 3e-63
Identities = 144/401 (35%), Positives = 208/401 (50%), Gaps = 55/401 (13%)
Query: 110 SSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVEAST-MVVPAAYVFYVGPISFSGPYC 168
S + +V +FGAKG+G TDDTKAF AC + T ++VP Y + PI SGP C
Sbjct: 49 SERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGP-C 107
Query: 169 KPNIVFQLDGTIIAPTNSNAWGG-GLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYD 227
K + Q+ GTIIAP + + W G +WL F L +T++G G ++G G WW+
Sbjct: 108 KARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWE----- 162
Query: 228 DPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQC 287
NH S P + PTAL F+ + V + + +S Q
Sbjct: 163 --------RSCKHNH----SNPCRG---------APTALTFHKCKNMRVENLNVIDSQQM 201
Query: 288 HLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHS------------------- 328
H+ +C V + + + +P SPNTDGIH+ S+ ++I +
Sbjct: 202 HIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQI 261
Query: 329 --SKMAC--GHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGSVQGVL 384
S + C GHGISIGSLGK + V +IT+ + +T NGVRIKTWQGGSG V ++
Sbjct: 262 SISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKII 321
Query: 385 FSNIQVSEVQLPIVIDQFYCDKRS-CTNHTSAVALAGINYEGIKGTYTVK-PVHFACSDS 442
F NI+++ V PI+IDQ+YCD R C N TSA+++ I++ ++GT K + +CSDS
Sbjct: 322 FRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDS 381
Query: 443 LPCVDVSLTSVELKPVQEQYHLYEPFCWQTYGQLMTPTTPP 483
PC ++ L ++L+P E FCW+ YG PP
Sbjct: 382 SPCRNILLQDIDLEPSNGD-GFTESFCWEAYGSSSGQVYPP 421
>At2g41850 polygalacturonase like protein
Length = 433
Score = 219 bits (558), Expect = 3e-57
Identities = 130/373 (34%), Positives = 191/373 (50%), Gaps = 57/373 (15%)
Query: 112 TMFNVLDFGAKGDGRTDDTKAFQATCAMACKVE-ASTMVVPAAYVFYVGPISFSGPYCKP 170
T +V DFGAKGDG+TDDT+AF AC A ++VP + + I +GP C
Sbjct: 66 TTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGP-CNS 124
Query: 171 NIVFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQG--KGVIDGRGSVWWQDFPYDD 228
+ Q+ GT+ A + + + +W+ F + +++ G GV+DG G WWQ+
Sbjct: 125 ILTVQIFGTLSASQKRSDY-KDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQN----- 178
Query: 229 PIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVK-PTALRFYGSFSPTVTGITIQNSPQC 287
+ + P K PTAL FY S S V + ++N+ Q
Sbjct: 179 ----------------------SCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQI 216
Query: 288 HLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSS------------------ 329
+ + C+ V V +V +++P DSPNTDGIH+ N++++ + S
Sbjct: 217 QISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNV 276
Query: 330 ---KMAC--GHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGSVQGVL 384
+ C GHGISIGSLG DN++A VS +T+ + T NGVRIKT+QGGSG+ ++
Sbjct: 277 QINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNII 336
Query: 385 FSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGT-YTVKPVHFACSDSL 443
F NIQ+ V+ PI+IDQ YCDK CT SAV + + Y I GT + + F CS +
Sbjct: 337 FQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNY 396
Query: 444 PCVDVSLTSVELK 456
PC + L V +K
Sbjct: 397 PCQGIVLDRVNIK 409
>At3g57510 endo-polygalacturonase
Length = 431
Score = 210 bits (534), Expect = 2e-54
Identities = 129/382 (33%), Positives = 194/382 (50%), Gaps = 57/382 (14%)
Query: 103 SNDYNGGSSTMFNVLDFGAKGDGRTDDTKAFQATCAMACKVE-ASTMVVPAAYVFYVGPI 161
S+D ++ +V +FGAKGDG+TDDT+AF+ AC +T +VP + +
Sbjct: 57 SSDETTLEASTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTYLLKST 116
Query: 162 SFSGPYCKPNIVFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQG--KGVIDGRGSV 219
F GP CK FQ+ GT+ A T + + WL + ++I G G+I+G G
Sbjct: 117 RFRGP-CKSLRNFQILGTLSASTKRSDY-KDKNHWLILEDVNNLSIDGGSTGIINGNGKT 174
Query: 220 WWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVK-PTALRFYGSFSPTVTG 278
WWQ+ ++ + P K PTAL Y + V
Sbjct: 175 WWQN---------------------------SCKIDKSKPCTKAPTALTLYNLKNLNVKN 207
Query: 279 ITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMAC----- 333
+ ++N+ Q + + CN V V +V I++PGDSPNTDGIH+ N++++ + +S +
Sbjct: 208 LRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCI 267
Query: 334 ------------------GHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQG 375
GHGISIGSLG DN++A VS I + + NGVRIKT+QG
Sbjct: 268 SIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQG 327
Query: 376 GSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGT-YTVKP 434
GSG+ + + F NI++ V+ PI+IDQ YCDK C + SAV + + Y+ I GT T
Sbjct: 328 GSGTAKNIKFQNIRMENVKNPIIIDQDYCDKDKCEDQESAVQVKNVVYKNISGTSATDVA 387
Query: 435 VHFACSDSLPCVDVSLTSVELK 456
+ CS+ PC + L +V++K
Sbjct: 388 ITLNCSEKYPCQGIVLENVKIK 409
>At3g07970 putative polygalacturonase
Length = 438
Score = 204 bits (518), Expect = 1e-52
Identities = 144/477 (30%), Positives = 227/477 (47%), Gaps = 92/477 (19%)
Query: 14 YMLLIVLLIWSSNF-ETCIARRGKHWRQSRTVSASLFKKKGNSHGNSHNQHGGGGSSSHS 72
Y +I+L ++ F +C + + R +S++++ + H QHG +SH
Sbjct: 2 YEKIIILSVFLLTFLPSCFSSYPFNHRDDLFMSSNVYYETNRQH-----QHGHNTRNSHL 56
Query: 73 KPKPPPPTHKKTPSSPLFPKPKVDPPSTPPSNDYNGGSSTMFNVLDFGAKGDGRTDDTKA 132
K + H P S S FNV FGAK +G DD+KA
Sbjct: 57 KNR-----HGYAPRS----------------------SPRSFNVNTFGAKANGN-DDSKA 88
Query: 133 FQATCAMACKVEASTMVV-PAAYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNSNAWGG 191
F AC +V P + + ++FSGP CK +++ + G I A N + +
Sbjct: 89 FMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGP-CKSSLIIFIYGRIEAWENPSDYKE 147
Query: 192 GLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYDDPIDDEEKLIVPLNHTQKPSLPVQ 251
W+ F + + ++G G IDG G +WW P
Sbjct: 148 RR-HWIVFENVNNLRVEGGGRIDGNGHIWW---------------------------PKS 179
Query: 252 NEMGRQMPAV-KPTALRFYGSFSPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDS 310
++ Q+P + PTA+ F + V+ I ++N+ Q HL F +C V ++ ++SP DS
Sbjct: 180 CKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADS 239
Query: 311 PNTDGIHLQNSKDVLIHSS---------------------KMACG--HGISIGSLGKDNT 347
PNTDGIH+ ++++LI S + CG HGISIGSLG+DN+
Sbjct: 240 PNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNS 299
Query: 348 RACVSNITIRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDK- 406
A VSN+ + + T NGVRIKTWQGG G + ++F +I + V PI+I+Q YCD+
Sbjct: 300 EAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRV 359
Query: 407 RSCTNHTSAVALAGINYEGIKGTYTVKP--VHFACSDSLPCVDVSLTSVELKPVQEQ 461
+C SAV ++ + Y+ I+GT + +P V F CS ++PC +S+ +V+L +Q
Sbjct: 360 EACPEQKSAVQVSNVLYKNIQGT-SSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQ 415
>At5g44840 polygalacturonase
Length = 381
Score = 199 bits (507), Expect = 2e-51
Identities = 118/390 (30%), Positives = 185/390 (47%), Gaps = 71/390 (18%)
Query: 113 MFNVLDFGAKGDGRTDDTKAFQATCAMACKV--EASTMVVPAAYVFYVGPISFSGPYCKP 170
+++VL+FGA G+G TDD+KAF + C + T ++P+ F + P++F GP P
Sbjct: 23 IYDVLEFGADGNGITDDSKAFVKAWSAMCGSGGNSKTFIIPSNKTFLLQPLTFQGPCKSP 82
Query: 171 NIVFQLDGTIIAPTNSNAWGG-GLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYDDP 229
++ + DG I+AP N AW L +W+ F +++G+T+ G G I GRGS +W+
Sbjct: 83 SVQVKFDGKIVAPINKAAWSDYKLFRWVSFKEIIGLTVNGSGTIHGRGSSFWKQ------ 136
Query: 230 IDDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQCHL 289
L F +TGIT NSP+ H+
Sbjct: 137 ------------------------------------LHFQRCNDLMITGITSFNSPKNHI 160
Query: 290 KFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHS--------------------- 328
C V + + + +P DSPNTDGI++ S DV I+
Sbjct: 161 SISECKRVKITKIKLVAPHDSPNTDGINISESSDVDIYDTVIGTGDDCVAINSGSMNINI 220
Query: 329 SKMAC--GHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGSVQGVLFS 386
++M C GHGIS+GS+G+D + V N+ + + T NG RIKTW G G + +LF
Sbjct: 221 ARMNCGPGHGISVGSVGRDGEESIVENVQVTNCTFIRTDNGARIKTWPNGKGYAKNILFK 280
Query: 387 NIQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGTYTV-KPVHFACSDSLPC 445
++ E + PI+IDQ Y DK SAVA++ + + ++GT + + + CS C
Sbjct: 281 SLTFRETKNPIIIDQNYVDKGRLDVEESAVAISNVTFTDLRGTSKLDEIIKIDCSKVTYC 340
Query: 446 VDVSLTSVELKPVQEQYHLYEPFCWQTYGQ 475
D+ L +++ V + E C YG+
Sbjct: 341 KDIVLDKIDIATVDGNKPIVE--CSNVYGK 368
>At4g35670 putative polygalacturonase
Length = 374
Score = 191 bits (485), Expect = 8e-49
Identities = 116/369 (31%), Positives = 180/369 (48%), Gaps = 70/369 (18%)
Query: 114 FNVLDFGAKGDGRTDDTKAFQATCAMACKVEAS--TMVVPAAYVFYVGPISFSGPYCKPN 171
+NVL+F AKGDG+TDD++AF AC + T+++P+ F + P F GP +
Sbjct: 14 YNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSSS 73
Query: 172 IVFQLDGTIIAPTNSNAWGGGLLQ-WLEFSKLVGITIQGKGVIDGRGSVWWQDFPYDDPI 230
I QLDGTI+AP++ AW + + W++FS + G+ I G G ID RGS +W+
Sbjct: 74 IKVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWE-------- 125
Query: 231 DDEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQCHLK 290
AL + + GIT +SP+ H+
Sbjct: 126 ----------------------------------ALHISKCDNLRINGITSIDSPKNHIS 151
Query: 291 FDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKMAC----------------- 333
CN V + ++++ +P SPNTDGI + +S ++ I S +
Sbjct: 152 IKTCNTVAISNINLFAPETSPNTDGIDISDSTNINIFDSTIQTGDDCIAINSGSSNINIT 211
Query: 334 ------GHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSN 387
GHGIS+GSLG A VS++ + + T NG RIKTW GG G + + F++
Sbjct: 212 GINCGPGHGISVGSLGAGGAEAKVSDVQVTHCTFNQTTNGARIKTWLGGQGYARNISFTD 271
Query: 388 IQVSEVQLPIVIDQFYCDKRSCTNHTSAVALAGINYEGIKGTYTVK-PVHFACSDSLPCV 446
I + + PI+IDQ Y DK T SAVA++ + + +GT + K + CS++ CV
Sbjct: 272 ITLVNTKNPIIIDQHYIDKGRLTEE-SAVAISNVKFVDFRGTSSNKNAITLKCSETTHCV 330
Query: 447 DVSLTSVEL 455
DV + +++
Sbjct: 331 DVVMDGIDI 339
>At1g78400 similar to exopolygalacturonase precursor
sp|Q00293|PGLX_ASPTU
Length = 412
Score = 171 bits (432), Expect = 1e-42
Identities = 125/382 (32%), Positives = 184/382 (47%), Gaps = 73/382 (19%)
Query: 113 MFNVLDFGAKGDGRTDDTKAFQATCAMACKVEASTMVVPAAYVFYVGPISFSGPYCKPNI 172
+F+V +GA+GDG+TD+T AF AC+ + V FY+G ++F+GP CK I
Sbjct: 34 VFDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGP-CKSRI 92
Query: 173 VFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYDDPIDD 232
F + GT++AP + NA W+ F + +T+ G G++DG+GS W
Sbjct: 93 SFIIKGTLLAPKDPNAIKQD--SWIIFRYVDYLTVSGGGILDGQGSYSW----------- 139
Query: 233 EEKLIVPLNHTQKP----SLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQCH 288
PLN+ ++ +LP+ MG Q +RF +T I NS H
Sbjct: 140 ------PLNNCRQTHNCRALPMN--MGFQF-------VRF-----SRLTRIKSINSKMGH 179
Query: 289 LKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHS-------------------- 328
L F + + V+I +PGDSPNTDGI + +S + IH
Sbjct: 180 LNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNHMKIHHVDIATGDDCIAILSGTFNLD 239
Query: 329 -SKMACG--HGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTW--QGGSGSVQGV 383
+K+ CG HGIS+GSLGK V + +R+ + T NGVRIKTW G V
Sbjct: 240 INKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSPGEPNLVSNF 299
Query: 384 LFSNIQVSEVQLPIVIDQFYCDKRSCT---------NHTSAVALAGINYEGIKGTYTVK- 433
LF N+Q+ +VQ PI IDQ YC C+ S + + + ++ I GT T K
Sbjct: 300 LFKNLQMIDVQSPINIDQRYCPNPPCSFQVTSLTRNKSFSKIQIRDVKFQNIWGTSTAKE 359
Query: 434 PVHFACSDSLPCVDVSLTSVEL 455
V CS ++PC +V L ++ +
Sbjct: 360 AVKLQCSKNVPCKNVQLFNINI 381
>At1g43080 hypothetical protein
Length = 404
Score = 168 bits (425), Expect = 7e-42
Identities = 117/374 (31%), Positives = 178/374 (47%), Gaps = 60/374 (16%)
Query: 113 MFNVLDFGAKGDGRTDDTKAFQATCAMAC-KVEASTMVVPAAYVFYVGPISFSGPYCKPN 171
+FNV +G++ DG+TD+ AF + AC ++ S+ + FY+G + F GP CK
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTFYLGGVEFVGP-CKNP 88
Query: 172 IVFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYDDPID 231
I F +DGT++AP N W+ F + ++I G G +DG+G W P++
Sbjct: 89 IEFVIDGTLLAPANPRDIKQDT--WINFRYINNLSISGSGTLDGQGKYSW-------PLN 139
Query: 232 DEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQCHLKF 291
D K +T P L + + F + + IT NS H F
Sbjct: 140 DCHK------NTNCPKLAM--------------TMGFAFVNNSRIKDITSLNSKMGHFNF 179
Query: 292 DNCNGVLVHDVSISSPGDSPNTDGI--------HLQNSK---------------DVLIHS 328
+ + + V+I++PGDSPNTDGI H+ N+ ++ I +
Sbjct: 180 FSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISN 239
Query: 329 SKMACGHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGS--VQGVLFS 386
K GHGIS+GSLGK+ V ++T+RD + T +G+RIKTW+ + V ++
Sbjct: 240 IKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKIVVSNFIYE 299
Query: 387 NIQVSEVQLPIVIDQFYCDKRSCTNH---TSAVALAGINYEGIKGT-YTVKPVHFACSDS 442
NIQ+ +V PI IDQ YC C + S V + I + I GT + V+ CS S
Sbjct: 300 NIQMIDVGKPINIDQKYCPHPPCEHEKKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKS 359
Query: 443 LPCVDVSLTSVELK 456
PC +V L + LK
Sbjct: 360 FPCKNVELIDINLK 373
>At1g43100 hypothetical protein
Length = 444
Score = 167 bits (424), Expect = 1e-41
Identities = 117/374 (31%), Positives = 178/374 (47%), Gaps = 60/374 (16%)
Query: 113 MFNVLDFGAKGDGRTDDTKAFQATCAMAC-KVEASTMVVPAAYVFYVGPISFSGPYCKPN 171
+FNV +G++ DG+TD+ AF + AC ++ S+ + FY+G + F GPY P
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGKFYLGGVEFVGPYKNP- 88
Query: 172 IVFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYDDPID 231
I F +DGT++AP N W+ F + ++I G G +DG+G W P++
Sbjct: 89 IEFVIDGTLLAPANPRDIKQDT--WINFRYINNLSISGSGTLDGQGKYSW-------PLN 139
Query: 232 DEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQCHLKF 291
D K +T P L + + F + + IT NS H F
Sbjct: 140 DCHK------NTNCPELAM--------------TMGFAFVNNSRIKDITSLNSKMGHFNF 179
Query: 292 DNCNGVLVHDVSISSPGDSPNTDGI--------HLQNSK---------------DVLIHS 328
+ + + V+I++PGDSPNTDGI H+ N+ ++ I +
Sbjct: 180 FSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISN 239
Query: 329 SKMACGHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGS--VQGVLFS 386
K GHGIS+GSLGK+ V ++T+RD + T +G+RIKTW+ + V ++
Sbjct: 240 VKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYE 299
Query: 387 NIQVSEVQLPIVIDQFYCDKRSCTNH---TSAVALAGINYEGIKGT-YTVKPVHFACSDS 442
NIQ+ +V PI IDQ YC C + S V + I + I GT + V+ CS S
Sbjct: 300 NIQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKS 359
Query: 443 LPCVDVSLTSVELK 456
PC +V L + LK
Sbjct: 360 FPCKNVELIDINLK 373
>At1g43090 hypothetical protein
Length = 444
Score = 167 bits (424), Expect = 1e-41
Identities = 117/374 (31%), Positives = 178/374 (47%), Gaps = 60/374 (16%)
Query: 113 MFNVLDFGAKGDGRTDDTKAFQATCAMAC-KVEASTMVVPAAYVFYVGPISFSGPYCKPN 171
+FNV +G++ DG+TD+ AF + AC ++ S+ + FY+G + F GP CK
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKHACTRISGSSKIYVPKGTFYLGGVEFVGP-CKNP 88
Query: 172 IVFQLDGTIIAPTNSNAWGGGLLQWLEFSKLVGITIQGKGVIDGRGSVWWQDFPYDDPID 231
I F +DGT++AP N W+ F + ++I G G +DG+G W P++
Sbjct: 89 IEFVIDGTLLAPANPRDIKQDT--WINFRYINNLSISGSGTLDGQGKYSW-------PLN 139
Query: 232 DEEKLIVPLNHTQKPSLPVQNEMGRQMPAVKPTALRFYGSFSPTVTGITIQNSPQCHLKF 291
D K +T P L + + F + + IT NS H F
Sbjct: 140 DCHK------NTNCPKLAM--------------TMGFAFVNNSRIKDITSLNSKMGHFNF 179
Query: 292 DNCNGVLVHDVSISSPGDSPNTDGI--------HLQNSK---------------DVLIHS 328
+ + + V+I++PGDSPNTDGI H+ N+ ++ I +
Sbjct: 180 FSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISN 239
Query: 329 SKMACGHGISIGSLGKDNTRACVSNITIRDVNMHNTMNGVRIKTWQGGSGS--VQGVLFS 386
K GHGIS+GSLGK+ V ++T+RD + T +G+RIKTW+ + V ++
Sbjct: 240 VKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYE 299
Query: 387 NIQVSEVQLPIVIDQFYCDKRSCTNH---TSAVALAGINYEGIKGT-YTVKPVHFACSDS 442
NIQ+ +V PI IDQ YC C + S V + I + I GT + V+ CS S
Sbjct: 300 NIQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKS 359
Query: 443 LPCVDVSLTSVELK 456
PC +V L + LK
Sbjct: 360 FPCKNVELIDINLK 373
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,277,593
Number of Sequences: 26719
Number of extensions: 663655
Number of successful extensions: 6219
Number of sequences better than 10.0: 236
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 3233
Number of HSP's gapped (non-prelim): 2090
length of query: 504
length of database: 11,318,596
effective HSP length: 104
effective length of query: 400
effective length of database: 8,539,820
effective search space: 3415928000
effective search space used: 3415928000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0008.5