BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0590c.6
(364 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD460... 241 3e-64
BG448527 similar to PIR|T51509|T51 probable transcription factor... 229 1e-60
TC88523 similar to PIR|T05690|T05690 myb-related transcription f... 191 4e-49
BE124666 similar to PIR|JQ0957|JQ0 myb-related protein 330 - gar... 187 7e-48
BI311137 similar to GP|17380966|gb putative transcription factor... 186 9e-48
TC84780 homologue to PIR|F85021|F85021 probable transcription fa... 186 2e-47
BF643814 similar to GP|19386839|db putative myb-related protein ... 186 2e-47
TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcri... 182 2e-46
TC88428 homologue to PIR|T07393|T07393 myb-related transcription... 181 5e-46
TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine ... 180 7e-46
TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine ... 179 1e-45
TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcr... 175 3e-44
TC80659 similar to PIR|T48607|T48607 probable transcription fact... 172 2e-43
BG644406 homologue to PIR|T07398|T07 myb-related transcription f... 172 2e-43
TC91632 homologue to PIR|F85021|F85021 probable transcription fa... 103 9e-42
BF647428 homologue to PIR|T51621|T51 myb-like protein [imported]... 166 1e-41
TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcript... 166 1e-41
TC78266 similar to GP|22266673|dbj|BAC07543. myb-related transcr... 165 2e-41
TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon... 163 1e-40
TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 162 1e-40
>TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD46010.1
[imported] - Arabidopsis thaliana, partial (39%)
Length = 1259
Score = 241 bits (615), Expect = 3e-64
Identities = 146/354 (41%), Positives = 201/354 (56%), Gaps = 20/354 (5%)
Frame = +2
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M +S +++G+KKGPWTPEEDQKLV++IQ+HGHG WR LPK AGL RCGKSCRLRW NY
Sbjct: 56 MGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNY 235
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPDIKRGKFS EEE+ I+ LHS+LGNKWS IA +L GRTDNEIKN+WNTH+KKKL++MG
Sbjct: 236 LRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMG 415
Query: 121 LDPVTHTPRLD-------VLQLASILNSSLYNNSAQFNNPGLFGMERV-VNPSQLQLLNL 172
DP+TH PR D +L LA++ + N + +++ M + L L
Sbjct: 416 FDPMTHQPRTDLVSTIPYLLALANMTEIIDHQNQSSWDDQQHAAMSSLQAEAVHLAKLQC 595
Query: 173 VTTLLSCQNTNQDVWNTNNYQQNQLGGSTQWQHQTQCSQPMQLDNSIHAFQPN------Q 226
+ LL N++ ++ N N+Y QN + + + + QP+ L N+I + N Q
Sbjct: 596 LQYLLQSSNSSINI-NNNSYDQNAMITNMEQE------QPLSLLNTISNVKENTIMDCSQ 754
Query: 227 VNEENHCTTSNPLHILEPPQLMKTNLEHQISPIASPFNHQNPMQNLLQYNGGFTSNRKRP 286
++ + + S PLH ++ L H + P F+ Q+ + N G T+
Sbjct: 755 LDSTHAASFSQPLH-------HQSVLPHFLDPQQVSFSSQSCLNNEQSQGGTITNFATVD 913
Query: 287 E------PSSATQSFSSLLCNSEGMPNFNLSSLLSSTPSSSSPSTLNSSSSTTF 334
E PSSA S N+ G+ + SS SS PS ++ S F
Sbjct: 914 ETSWINVPSSAPISVPP---NAIGISAGDASSCTSSYGGGGGPSPVSYWSEFFF 1066
>BG448527 similar to PIR|T51509|T51 probable transcription factor (MYB9) -
Arabidopsis thaliana, partial (40%)
Length = 633
Score = 229 bits (584), Expect = 1e-60
Identities = 116/201 (57%), Positives = 139/201 (68%), Gaps = 3/201 (1%)
Frame = +1
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M +S ++ GVKKGPWT EED+KL+DYI KHGHG W TL K AGL RCGKSCRLRW NY
Sbjct: 40 MGRSPCCDEIGVKKGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNY 219
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPDIKRGKF+ EEE II LHSVLGNKWS IAA+L GRTDNEIKNYWNT+I+KKLLKMG
Sbjct: 220 LRPDIKRGKFTDEEERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKKLLKMG 399
Query: 121 LDPVTHTPRLD---VLQLASILNSSLYNNSAQFNNPGLFGMERVVNPSQLQLLNLVTTLL 177
+DP TH PR D ++ L+++L S N+ NNP G++ + + L + L+ +L
Sbjct: 400 IDPETHKPRTDYNHLMSLSNLLGMSNIGNTFS-NNP--LGLQPXI--THLXKMQLLQNML 564
Query: 178 SCQNTNQDVWNTNNYQQNQLG 198
NTN N N G
Sbjct: 565 QIMNTNNSFGNMGNXPYTPXG 627
>TC88523 similar to PIR|T05690|T05690 myb-related transcription factor MYB4
- Arabidopsis thaliana, partial (54%)
Length = 1292
Score = 191 bits (485), Expect = 4e-49
Identities = 87/132 (65%), Positives = 101/132 (75%)
Frame = +1
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M +S EK KG WT EED +L+ YI+ HG G WR+LPK AGL RCGKSCRLRW NY
Sbjct: 271 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 450
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPD+KRG F+ EE+E II+LHS+LGNKWS IA L GRTDNEIKNYWNTHI++KLL G
Sbjct: 451 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG 630
Query: 121 LDPVTHTPRLDV 132
+DP TH P +V
Sbjct: 631 IDPATHRPLNEV 666
>BE124666 similar to PIR|JQ0957|JQ0 myb-related protein 330 - garden
snapdragon, partial (48%)
Length = 536
Score = 187 bits (474), Expect = 7e-48
Identities = 84/126 (66%), Positives = 99/126 (77%)
Frame = +3
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M +S EK KG WT EED++L++YI+ HG G WR+LPK AGL RCGKSCRLRW NY
Sbjct: 27 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY 206
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPD+KRG F+ +E++ II LHS+LGNKWS IAA L GRTDNEIKNYWNTHIK+KL G
Sbjct: 207 LRPDLKRGNFTEQEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 386
Query: 121 LDPVTH 126
+DP TH
Sbjct: 387 VDPQTH 404
>BI311137 similar to GP|17380966|gb putative transcription factor
{Arabidopsis thaliana}, partial (35%)
Length = 761
Score = 186 bits (473), Expect = 9e-48
Identities = 93/193 (48%), Positives = 127/193 (65%), Gaps = 12/193 (6%)
Frame = +1
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M + + K ++KG W+PEED+KL++YI KHGHG W ++PK AGL+RCGKSCRLRW NY
Sbjct: 148 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 327
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPD+KRG FS +EE +II+LH++LGN+WS IAA L GRTDNEIKN WN+ +KKKL + G
Sbjct: 328 LRPDLKRGAFSEQEENSIIELHALLGNRWSQIAAQLPGRTDNEIKNLWNSSLKKKLKQKG 507
Query: 121 LDPVTH----------TPRLDVLQLASILNSSLYNNSAQFNNPGLFGMERVVNPSQL--Q 168
+DP TH TP + + Q S+ ++ + N NP M+ P ++ +
Sbjct: 508 IDPNTHQPFSENNDNDTPNIQI-QKTSVGSNEVKNLFDDTPNPNSIPMDNCNYPLEINSK 684
Query: 169 LLNLVTTLLSCQN 181
+ N V + C N
Sbjct: 685 INNSVNCFIPCDN 723
>TC84780 homologue to PIR|F85021|F85021 probable transcription factor
[imported] - Arabidopsis thaliana, partial (39%)
Length = 971
Score = 186 bits (471), Expect = 2e-47
Identities = 84/132 (63%), Positives = 105/132 (78%)
Frame = +1
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M + + K ++KG W+PEED+KL+++I K+GHG W ++PK AGL+RCGKSCRLRW NY
Sbjct: 103 MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY 282
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPD+KRG FS EEE II+LHSVLGN+WS IAA L GRTDNEIKN WN+ +KKKL + G
Sbjct: 283 LRPDLKRGTFSQEEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKG 462
Query: 121 LDPVTHTPRLDV 132
+DPVTH P +V
Sbjct: 463 IDPVTHKPLSEV 498
>BF643814 similar to GP|19386839|db putative myb-related protein {Oryza
sativa (japonica cultivar-group)}, partial (49%)
Length = 545
Score = 186 bits (471), Expect = 2e-47
Identities = 88/148 (59%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
Frame = +1
Query: 8 EKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKR 67
EK KG W+ EED++L++YI++ G G WR+LPK AGL RCGKSCRLRW NYLRPD+KR
Sbjct: 10 EKQHTNKGAWSKEEDERLINYIKQQGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKR 189
Query: 68 GKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMGLDPVTHT 127
G F+ EE+E II LH+++GNKWS IA L GRTDNEIKNYWNTHIK+KL G+DP TH
Sbjct: 190 GNFTHEEDELIISLHAMVGNKWSQIAQKLPGRTDNEIKNYWNTHIKRKLYSRGIDPTTHQ 369
Query: 128 P--RLDVLQLASILNSSLYNNSAQFNNP 153
P L AS SS SA+ +P
Sbjct: 370 PLKTLSGTAAASTGTSSATTTSAEAASP 453
>TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcription
factor {Arabidopsis thaliana}, partial (40%)
Length = 1506
Score = 182 bits (462), Expect = 2e-46
Identities = 81/124 (65%), Positives = 101/124 (81%)
Frame = +2
Query: 9 KNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKRG 68
K ++KG W+PEED+KL++YI KHGHG W ++PK AGL+RCGKSCRLRW NYLRPD+KRG
Sbjct: 83 KQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 262
Query: 69 KFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMGLDPVTHTP 128
FS +EE II+LH+VLGN+WS IAA L GRTDNEIKN WN+ +KK+L + G+DP TH P
Sbjct: 263 AFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQSGIDPNTHKP 442
Query: 129 RLDV 132
+V
Sbjct: 443 LSEV 454
>TC88428 homologue to PIR|T07393|T07393 myb-related transcription factor -
tomato, partial (52%)
Length = 865
Score = 181 bits (458), Expect = 5e-46
Identities = 82/126 (65%), Positives = 100/126 (79%)
Frame = +3
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M + +K G+KKGPWT EED+KL+++I +G WR +PK AGL RCGKSCRLRW NY
Sbjct: 141 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 320
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPD+KRG S EE+ +I LH+ LGN+WS IA++L GRTDNEIKN+WNTHIKKKL KMG
Sbjct: 321 LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG 500
Query: 121 LDPVTH 126
+DPVTH
Sbjct: 501 IDPVTH 518
>TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine max},
partial (85%)
Length = 1389
Score = 180 bits (457), Expect = 7e-46
Identities = 82/116 (70%), Positives = 94/116 (80%)
Frame = +2
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M ++ EK G+K+GPW+ EED+ L YIQKHGHG WR LPK AGL RCGKSCRLRW NY
Sbjct: 107 MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 286
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKL 116
LRPDIKRG F+ EEEE II+LH +LGN+WS IAA L GRTDNEIKN W+TH+KKKL
Sbjct: 287 LRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKL 454
>TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine max},
partial (78%)
Length = 1156
Score = 179 bits (454), Expect = 1e-45
Identities = 80/117 (68%), Positives = 93/117 (79%)
Frame = +3
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M ++ EK G+KKGPWT EED+ L YI KHGH WR LPK+AGL RCGKSCRLRW NY
Sbjct: 66 MVRAPCCEKKGLKKGPWTLEEDEILTSYINKHGHSNWRALPKHAGLLRCGKSCRLRWINY 245
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLL 117
L+PDIKRG F+ EEEE II++H LGN+WS IAA L GRTDNEIKN W+TH+KK+LL
Sbjct: 246 LKPDIKRGNFTNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLL 416
>TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcription
factor VlMYBB1-1 {Vitis labrusca x Vitis vinifera},
partial (46%)
Length = 754
Score = 175 bits (443), Expect = 3e-44
Identities = 79/118 (66%), Positives = 96/118 (80%)
Frame = +2
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY 60
M ++ +KNG++KG WTPEED+KL+ Y+ ++G WR LPK AGL+RCGKSCRLRW NY
Sbjct: 98 MVRTPYCDKNGLRKGTWTPEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNY 277
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLK 118
LRPDIKRG FS EEEE II+LH LGN+W+ I+ANL GRTDNEIKNYW+T IKK L+K
Sbjct: 278 LRPDIKRGSFSHEEEETIIKLHEKLGNRWTMISANLPGRTDNEIKNYWHTTIKKTLVK 451
>TC80659 similar to PIR|T48607|T48607 probable transcription factor MYB40 -
Arabidopsis thaliana, partial (46%)
Length = 1040
Score = 172 bits (436), Expect = 2e-43
Identities = 80/121 (66%), Positives = 96/121 (79%)
Frame = +2
Query: 8 EKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKR 67
+K G+K+GPWT EED KLV++I +G WR +PK AGL RCGKSCRLRW NYLRPD+KR
Sbjct: 17 DKVGLKRGPWTIEEDHKLVNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKR 196
Query: 68 GKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMGLDPVTHT 127
G F+ EE+ IIQLH+ LGN+WS IA++ GRTDNEIKN+WNT IKKKL +GLDPV H
Sbjct: 197 GGFTEIEEDQIIQLHARLGNRWSKIASHFPGRTDNEIKNHWNTKIKKKLKFLGLDPVNHK 376
Query: 128 P 128
P
Sbjct: 377 P 379
>BG644406 homologue to PIR|T07398|T07 myb-related transcription factor THM6 -
tomato, partial (42%)
Length = 762
Score = 172 bits (436), Expect = 2e-43
Identities = 75/112 (66%), Positives = 92/112 (81%)
Frame = +1
Query: 8 EKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKR 67
+K GVKKGPWTPEED LV ++Q+HG G WRT+P + GL+RC KSCRLRW NYLRP IKR
Sbjct: 166 DKTGVKKGPWTPEEDIMLVSFVQEHGPGNWRTVPTHTGLRRCSKSCRLRWTNYLRPGIKR 345
Query: 68 GKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKM 119
G F+ +EE+ IIQL ++LGNKW+ IA+ L RTDN+IKNYWNTH+KKKL K+
Sbjct: 346 GSFTDQEEKMIIQLQALLGNKWAAIASYLPERTDNDIKNYWNTHLKKKLKKL 501
>TC91632 homologue to PIR|F85021|F85021 probable transcription factor
[imported] - Arabidopsis thaliana, partial (39%)
Length = 937
Score = 103 bits (258), Expect(2) = 9e-42
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = +3
Query: 61 LRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKMG 120
LRPD+KRG FS EEE I++LH+VLGN+WS IAA L GRTDNEIKN WN+ +KK+L + G
Sbjct: 237 LRPDLKRGTFSQEEENLIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQKG 416
Query: 121 LDPVTHTPRLDV 132
+DPVTH P +V
Sbjct: 417 IDPVTHKPLSEV 452
Score = 84.3 bits (207), Expect(2) = 9e-42
Identities = 34/56 (60%), Positives = 46/56 (81%)
Frame = +2
Query: 12 VKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKR 67
++KG W+PEED+KL+ +I K+GHG W ++PK AGL+RCGKSCRLRW NYL+ K+
Sbjct: 89 LRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLKT*FKK 256
>BF647428 homologue to PIR|T51621|T51 myb-like protein [imported] -
Arabidopsis thaliana, partial (44%)
Length = 689
Score = 166 bits (421), Expect = 1e-41
Identities = 74/112 (66%), Positives = 89/112 (79%)
Frame = +2
Query: 8 EKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKR 67
+K GVKKGPWTPEED LV YIQ+HG G W+ +P N GL RC KSCRLRW NYLRP IKR
Sbjct: 113 DKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKR 292
Query: 68 GKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKM 119
G F+ +EE+ II L ++LGN+W+ IAA L RTDN+IKNYWNT++KKKL K+
Sbjct: 293 GNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 448
>TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcription factor
{Arabidopsis thaliana}, partial (49%)
Length = 984
Score = 166 bits (420), Expect = 1e-41
Identities = 74/111 (66%), Positives = 86/111 (76%)
Frame = +1
Query: 8 EKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKR 67
+K GVKKGPWTPEED LV YIQ+HG G WR +P GL RC KSCRLRW NYLRP IKR
Sbjct: 178 DKEGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKR 357
Query: 68 GKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLK 118
G F+ +EE+ II L +LGN+W+ IA+ L RTDN+IKNYWNTH+KKKL K
Sbjct: 358 GNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 510
>TC78266 similar to GP|22266673|dbj|BAC07543. myb-related transcription
factor VlMYBB1-1 {Vitis labrusca x Vitis vinifera},
partial (46%)
Length = 665
Score = 165 bits (418), Expect = 2e-41
Identities = 76/133 (57%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = +1
Query: 1 MAKSNS-GEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWAN 59
MA++ S +K+G++KG WT EED+KL+ Y+ ++G WR LPK AGL RCGKSCRLRW N
Sbjct: 85 MARTPSCDKKSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLN 264
Query: 60 YLRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKM 119
YLRP+IKRG F+ EEEE II++H LGN+WSTIAA L GRTDNE+KNYW+T +KK++
Sbjct: 265 YLRPNIKRGNFTQEEEELIIRMHKNLGNRWSTIAAELPGRTDNEVKNYWHTSLKKRVEHN 444
Query: 120 GLDPVTHTPRLDV 132
+ + T D+
Sbjct: 445 QITNIEETKSKDI 483
>TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon
esculentum}, partial (37%)
Length = 990
Score = 163 bits (412), Expect = 1e-40
Identities = 81/153 (52%), Positives = 106/153 (68%), Gaps = 1/153 (0%)
Frame = +3
Query: 1 MAKSNSGEKNGVKKGPWTPEEDQKLVDYIQKHGHG-KWRTLPKNAGLKRCGKSCRLRWAN 59
M +S +K VKKGPW+PEED KL +YI+KHG G W TLPK GL RCGKSCRLRW N
Sbjct: 18 MGRSPCCDKANVKKGPWSPEEDAKLKEYIEKHGTGGNWITLPKKVGLTRCGKSCRLRWLN 197
Query: 60 YLRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLLKM 119
YLRP+IK G+FS E++ I L + +G++WS IA+ L+GRTDN++KNYWNT +KKK++ M
Sbjct: 198 YLRPNIKHGEFSDSEDKIICTLFASIGSRWSIIASKLEGRTDNDVKNYWNTKLKKKIMSM 377
Query: 120 GLDPVTHTPRLDVLQLASILNSSLYNNSAQFNN 152
V P+ V L+ + NS+ + S F N
Sbjct: 378 N-HSVEMKPQ-QVTLLSILQNSTKSSPSLSFTN 470
>TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 888
Score = 162 bits (411), Expect = 1e-40
Identities = 73/118 (61%), Positives = 95/118 (79%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 MAKSNS-GEKNGVKKGPWTPEEDQKLVDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWAN 59
MA++ S +K+G++KG WT EED+KL+ Y+ ++G WR LPK AGL RCGKSCRLRW N
Sbjct: 82 MARTPSCDKKSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLN 261
Query: 60 YLRPDIKRGKFSLEEEEAIIQLHSVLGNKWSTIAANLQGRTDNEIKNYWNTHIKKKLL 117
YLRP+IKRG F+ EEEE II++H LGN+WSTIAA L GRTDNE+KN+W+T +KK+ +
Sbjct: 262 YLRPNIKRGNFTQEEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAI 435
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.311 0.128 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,650,878
Number of Sequences: 36976
Number of extensions: 241056
Number of successful extensions: 2250
Number of sequences better than 10.0: 217
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2009
length of query: 364
length of database: 9,014,727
effective HSP length: 97
effective length of query: 267
effective length of database: 5,428,055
effective search space: 1449290685
effective search space used: 1449290685
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0590c.6