BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0340.11
(420 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78895 similar to GP|6056390|gb|AAF02854.1| Unknown protein {Ar... 80 2e-22
TC84723 similar to GP|16945387|emb|CAD11800. conserved hypotheti... 40 0.002
TC85290 similar to GP|7767653|gb|AAF69150.1| F27F5.2 {Arabidopsi... 36 0.032
AL384531 similar to GP|1213460|gb|A C subunit of V-ATPase {Ambly... 33 0.21
TC81530 similar to GP|10177440|dbj|BAB10736. gb|AAC55944.1~gene_... 32 0.60
TC81880 similar to PIR|B85431|B85431 trichohyalin like protein [... 31 1.0
TC77981 similar to PIR|T12970|T12970 hypothetical protein T6H20.... 30 1.3
AA660209 similar to GP|6642637|gb|A unknown protein {Arabidopsis... 30 1.7
TC77988 homologue to GP|18375499|gb|AAK09427.2 sucrose-phosphate... 30 1.7
TC77941 weakly similar to GP|9294810|gb|AAF86687.1| MTD1 {Medica... 25 2.1
BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 ... 30 2.3
TC84066 similar to GP|23498475|emb|CAD50426. ribonuclease putat... 30 2.3
AL386038 similar to GP|22135978|gb unknown protein {Arabidopsis ... 30 2.3
BF646688 similar to GP|3851530|gb| nodulin {Glycine max}, partia... 30 2.3
TC85214 similar to PIR|S26688|S26688 legumin K - garden pea, par... 30 2.3
CA859237 weakly similar to PIR|T45886|T458 RNA-binding protein c... 29 3.0
TC77326 similar to GP|12004682|gb|AAG44132.1 cytochrome P450 {Pi... 29 3.0
CA989549 weakly similar to PIR|A96555|A96 unknown protein [impor... 29 3.0
TC79376 homologue to GP|13877645|gb|AAK43900.1 Unknown protein {... 29 3.0
TC79049 weakly similar to PIR|T10798|T10798 pherophorin-S - Volv... 29 3.9
>TC78895 similar to GP|6056390|gb|AAF02854.1| Unknown protein {Arabidopsis
thaliana}, partial (28%)
Length = 2089
Score = 80.1 bits (196), Expect(2) = 2e-22
Identities = 38/106 (35%), Positives = 64/106 (59%)
Frame = +1
Query: 126 ETRERIKRRTSEALREPKVRKKMAEHPRFHSDKIKEKISYSLRRVWQERLKSKRFREQIF 185
ET ++I+ RT A++ PKV+ K+ + + K KIS +R++W+ R K +E
Sbjct: 520 ETLQKIRERTRIAMQNPKVKMKLTNLGHAQTTETKMKISVGVRKLWEMRRGRKMVQESCC 699
Query: 186 LSWEQCIANAAKKGGCGQEELDWDSYNKIKEQLELQQLLQAEEKEK 231
W+ IA A+++G GQEEL W+SY + EQL+ + L+ EE+++
Sbjct: 700 FEWQNLIAEASRQGFVGQEELQWNSYVTLDEQLKQEWLVSVEERKQ 837
Score = 43.5 bits (101), Expect(2) = 2e-22
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +3
Query: 100 ERMRRFKIGLANKGRVPWNKGRKHS 124
E++RR +I ANKG PWNKGRKHS
Sbjct: 441 EKLRRLRISKANKGNTPWNKGRKHS 515
>TC84723 similar to GP|16945387|emb|CAD11800. conserved hypothetical protein
{Neurospora crassa}, partial (5%)
Length = 999
Score = 39.7 bits (91), Expect = 0.002
Identities = 48/202 (23%), Positives = 85/202 (41%), Gaps = 16/202 (7%)
Frame = +3
Query: 123 HSAETRERIKRRTSEALREPKVRKKMAEHPRFHSDKIKEKISYSLRRVWQE----RLKSK 178
HS++ + + + R R + H R S + Y R QE ++
Sbjct: 369 HSSDEEDDRHMQVHHSRRRSHSRGSLYSHSRSPSSSYMTREEYEAERALQELRELKISKA 548
Query: 179 RFREQIFLSWE---QCIANAAKKG--GCGQEELDWDSYNKIKEQLELQQLLQ-------A 226
R RE++ + E + AK+ E +K Q+ELQ+ + A
Sbjct: 549 REREELRVQKEYREEAELQRAKRDLDEIRNREARISEEKHLKSQVELQKYQEEMRLAEKA 728
Query: 227 EEKEKEKLMAIARAEKFIQSWSECLAKEAKKGGSGEKELDWDSYEKIQEEMFLLNQIRRT 286
+++EKE A+ R +K Q E LAK+ K+ EKE E+ Q+E L++I +
Sbjct: 729 KQREKEAADAVERFQKKEQ---ERLAKQEKEKQEREKEFQRRLQEERQKE---LDRIAKA 890
Query: 287 TEKAKAKERARTKAEKEARIKA 308
++ + E+ + +E IK+
Sbjct: 891 KKEKEENEKEYQRRLREDLIKS 956
>TC85290 similar to GP|7767653|gb|AAF69150.1| F27F5.2 {Arabidopsis
thaliana}, partial (32%)
Length = 1558
Score = 35.8 bits (81), Expect = 0.032
Identities = 38/153 (24%), Positives = 65/153 (41%), Gaps = 14/153 (9%)
Frame = +3
Query: 204 EELDWDSYNKIKEQLELQQLLQA----EEKEKEKLMAIA--------RAEKFIQS--WSE 249
EE + ++I +L ++LL+ EEKE +K +A + I S W E
Sbjct: 447 EEATCKTISEINLKLLFEELLERAKEKEEKEAKKRQRLADDFTNLLYTLKDIITSSTWEE 626
Query: 250 CLAKEAKKGGSGEKELDWDSYEKIQEEMFLLNQIRRTTEKAKAKERARTKAEKEARIKAI 309
C K + + +SY K E ++ + EK + +E + K EKE K
Sbjct: 627 C--KALFEDTQEYISIGNESYSKEIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEK 800
Query: 310 KKVMLNQKKKDLRERIKGRGNIKSQLCKNANED 342
+K ++K+ RE+ K + K + N+D
Sbjct: 801 RKEKEKKEKEREREKEKSKERHKKDESDSDNQD 899
>AL384531 similar to GP|1213460|gb|A C subunit of V-ATPase {Amblyomma
americanum}, partial (6%)
Length = 470
Score = 33.1 bits (74), Expect = 0.21
Identities = 27/87 (31%), Positives = 42/87 (48%)
Frame = +3
Query: 175 LKSKRFREQIFLSWEQCIANAAKKGGCGQEELDWDSYNKIKEQLELQQLLQAEEKEKEKL 234
+K K E+ FL+ + AK +L+W +I E ++Q+ +AEEK+++
Sbjct: 48 VKEKDIIEKEFLTTLLVVVPKAK-------DLEWQQEYEILE--DIQEKREAEEKKRKDE 200
Query: 235 MAIARAEKFIQSWSECLAKEAKKGGSG 261
A RAEK Q+ E KE K G
Sbjct: 201 EAAIRAEKDRQAALEAANKENKSSTQG 281
>TC81530 similar to GP|10177440|dbj|BAB10736.
gb|AAC55944.1~gene_id:K9H21.2~similar to unknown protein
{Arabidopsis thaliana}, partial (24%)
Length = 1135
Score = 31.6 bits (70), Expect = 0.60
Identities = 25/102 (24%), Positives = 52/102 (50%)
Frame = +1
Query: 216 EQLELQQLLQAEEKEKEKLMAIARAEKFIQSWSECLAKEAKKGGSGEKELDWDSYEKIQE 275
E + ++ + E+ ++ L+ A+ +++ + L K+ K+ + ++ + E+ Q+
Sbjct: 298 EGVASKRQVSPEKLYRQALLRSRFADTILKAQEKALEKDEKRDPE-KLRIEREELERRQK 474
Query: 276 EMFLLNQIRRTTEKAKAKERARTKAEKEARIKAIKKVMLNQK 317
E + R +AKA E AR KAE EA +A +K L ++
Sbjct: 475 E-----EKARLQAEAKAAEEARRKAEAEAAAEAKRKRELERE 585
>TC81880 similar to PIR|B85431|B85431 trichohyalin like protein [imported] -
Arabidopsis thaliana, partial (4%)
Length = 1043
Score = 30.8 bits (68), Expect = 1.0
Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 3/235 (1%)
Frame = +2
Query: 123 HSAETRERIKRRTSEALREPKVRKKMAEHPRFHSDKIKEKISYSLRRVWQERLKSKRFRE 182
HS +++E+ +T ++ + ++K+ +E LR++ E L+ +R R+
Sbjct: 383 HSTKSKEKCVSKTPASVDKDDEKQKIE----------RELEKERLRKI--EELERERERQ 526
Query: 183 QIFLSWEQCIANAAKKGGCGQEELDWDSYNKIKEQLELQQLLQAEEKEKEKLMAIARAEK 242
+ ++ ++ + A + + E + D + E + AE +E+ + A RA
Sbjct: 527 KDRMAVDRAMLEAER-----EREREKDRAAVDRATFEARDRAYAEGRERAERAAFDRATA 691
Query: 243 FIQSWSECLAKEAKKGGSGEKELDWDSYEKIQEEMFLLNQIRRTTEKAKAKERARTKAEK 302
+ + AKE + E D +K E L KA+ A +A
Sbjct: 692 EARQRALAEAKERLEKACAEAR-DKSYTDKATAEARL-----------KAERAAVERATA 835
Query: 303 EARIKAIKKVMLNQKKKDLRERIKGRGNIKSQL-CKNANEDGEAALE--ITQQFK 354
EAR +A++KV + + RER++ + K + +N G ++L+ + QF+
Sbjct: 836 EARERAMEKVKVERAAFGSRERLERSVSDKFGISSRNDGRQGSSSLQDMLDSQFR 1000
>TC77981 similar to PIR|T12970|T12970 hypothetical protein T6H20.190 -
Arabidopsis thaliana, partial (39%)
Length = 1191
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/62 (33%), Positives = 30/62 (47%)
Frame = +2
Query: 288 EKAKAKERARTKAEKEARIKAIKKVMLNQKKKDLRERIKGRGNIKSQLCKNANEDGEAAL 347
EKAKA+E AR +AEK A K + + K ++ + S L K E EAA
Sbjct: 518 EKAKAEEEARVEAEKAREAAATTKKLEEEALKLSKQEAQA-----SNLVKEDQEKAEAAW 682
Query: 348 EI 349
++
Sbjct: 683 KL 688
>AA660209 similar to GP|6642637|gb|A unknown protein {Arabidopsis thaliana},
partial (4%)
Length = 544
Score = 30.0 bits (66), Expect = 1.7
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 284 RRTTEKAKAKERARTKAEKEARIKAIKKVMLNQKKK-DLRERIKGRGNIKS 333
R+T EK K ++R R + ++ +IK M+N++KK ++ R K G K+
Sbjct: 5 RKTAEKKKLRKRKRKERKRSRKIK-----MINEEKKXKIKRRRKDTGRTKT 142
>TC77988 homologue to GP|18375499|gb|AAK09427.2 sucrose-phosphate synthase
{Medicago sativa}, partial (62%)
Length = 2248
Score = 30.0 bits (66), Expect = 1.7
Identities = 11/26 (42%), Positives = 19/26 (72%)
Frame = +1
Query: 238 ARAEKFIQSWSECLAKEAKKGGSGEK 263
A+ E + SWS+ ++K+ +KGG+ EK
Sbjct: 1030 AKLENAVLSWSKGISKDVRKGGTAEK 1107
>TC77941 weakly similar to GP|9294810|gb|AAF86687.1| MTD1 {Medicago
truncatula}, partial (15%)
Length = 1059
Score = 25.0 bits (53), Expect(2) = 2.1
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +1
Query: 19 CACTFCPPTTLQVKTATPRLVFVCSLQRVLSIEELQ 54
C C F P T Q + F+CSL LSI L+
Sbjct: 25 CYCVFSFPFTQQTQYTIFFSSFLCSLTHYLSISLLK 132
Score = 23.1 bits (48), Expect(2) = 2.1
Identities = 16/46 (34%), Positives = 20/46 (42%)
Frame = +3
Query: 58 DDDSDNQSETSVDSSDYLNGGDGVVGLSDSLEIESLSRKAVKERMR 103
+DDSD S S SS N SD E+E S K + M+
Sbjct: 213 EDDSDTDSCVSSSSSLGRNSDSSEDDSSDREEVEKNSFKGPLDTMK 350
>BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 {Leishmania
major}, partial (0%)
Length = 1101
Score = 29.6 bits (65), Expect = 2.3
Identities = 12/37 (32%), Positives = 20/37 (53%)
Frame = +3
Query: 121 RKHSAETRERIKRRTSEALREPKVRKKMAEHPRFHSD 157
R+H TRE KRR ++ + + R++ H H+D
Sbjct: 894 REHPHNTRETTKRRRDKSAEKQETRERTRRHTTTHTD 1004
>TC84066 similar to GP|23498475|emb|CAD50426. ribonuclease putative
{Plasmodium falciparum 3D7}, partial (0%)
Length = 481
Score = 29.6 bits (65), Expect = 2.3
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 271 EKIQEEMFLLNQIRRTTEKAKAKERARTKAEKEARIKAIKKVMLNQKKKDLRERIKGRG 329
+K + +N + K K K + + + EKE +K ++ +KKKD + + KG+G
Sbjct: 284 QKFNDSKTRIN*MNSKPRKEKEKGKKKKRKEKE------RKTVMKKKKKDRKGKGKGKG 442
>AL386038 similar to GP|22135978|gb unknown protein {Arabidopsis thaliana},
partial (75%)
Length = 489
Score = 29.6 bits (65), Expect = 2.3
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -1
Query: 233 KLMAIARAEKFIQSWSECLAKEAKKGGSGEKELDWDSYEKIQEEMFLLNQIRRTTEK-AK 291
K+ AIA+ + I SW +A ++ + +S ++ +F L Q+ + A+
Sbjct: 303 KMTAIAKTDDPIPSWKPIATAKADTVAECDEGIPPESSNLLESHLFSLYQVVKILRN*AR 124
Query: 292 AKERARTKAEKEARIK 307
AKER KAE R++
Sbjct: 123 AKER---KAEMRGRLE 85
>BF646688 similar to GP|3851530|gb| nodulin {Glycine max}, partial (46%)
Length = 669
Score = 29.6 bits (65), Expect = 2.3
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +3
Query: 223 LLQAE-EKEKEKLMAIARAEKFIQSWSECLAKEAKKGGSGEKELDWDSYEKIQEEMFLLN 281
L +AE + E EK+ A+ EK ++ L+K + + + +E +W+ Y+K +E +L
Sbjct: 225 LREAELQGEVEKMNALTTTEKLK---ADLLSKASVQYETKVQEANWELYKKQKEAEAILF 395
Query: 282 QIRRTTEKAKAKERA---RTKAEKEARIKAIKK 311
+ + E KA + K E EA + A KK
Sbjct: 396 EKKAEAEAQKALADSTFYARKQEAEAELYAKKK 494
>TC85214 similar to PIR|S26688|S26688 legumin K - garden pea, partial (94%)
Length = 1831
Score = 29.6 bits (65), Expect = 2.3
Identities = 36/157 (22%), Positives = 61/157 (37%), Gaps = 16/157 (10%)
Frame = +3
Query: 55 INVDDDSDNQSETSVDSSDYL---NGGDGVVGLSDSLEIESLSRKAVKERMRRFKIGLAN 111
+N D D+ + ++ D + GG ++ E E R +E +
Sbjct: 750 LNTDQDTAKRLQSPRDQRSQIVRVEGGLSIISPEWQQEDEEYERSPEEEE---------D 902
Query: 112 KGRVPWNKGRKHSAETRERIKRRTSEALRE-----------PKVRKKMAEHPRFHSDKIK 160
+GR R+HS E RER R + E + R++ HPR HS + +
Sbjct: 903 EGRSRHLLRREHSQEERERDPRHPGHSQEEREWDPRHPGHSQEERERDPRHPR-HSQEER 1079
Query: 161 EKIS--YSLRRVWQERLKSKRFREQIFLSWEQCIANA 195
E+ Y R W E+ ++ R + E+ I +A
Sbjct: 1080EREDDPYGRGRPWWEKESREKQRTRGQNGLEETICSA 1190
>CA859237 weakly similar to PIR|T45886|T458 RNA-binding protein cp29 protein
- Arabidopsis thaliana, partial (20%)
Length = 298
Score = 29.3 bits (64), Expect = 3.0
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +2
Query: 321 LRERIKGRGNIKSQLCKNANEDGEAALEITQQFKLDTKLTKINISKNINSEVAREGGF 378
+R+R GR + ++NE+ EAA++ + D + K++ + ++ R GG+
Sbjct: 53 IRDRETGRSRGFGFVTYSSNEEAEAAIQSLNDQEFDGRTIKVDRASERSTPAPRSGGY 226
>TC77326 similar to GP|12004682|gb|AAG44132.1 cytochrome P450 {Pisum
sativum}, complete
Length = 1864
Score = 29.3 bits (64), Expect = 3.0
Identities = 32/142 (22%), Positives = 59/142 (41%)
Frame = +1
Query: 268 DSYEKIQEEMFLLNQIRRTTEKAKAKERARTKAEKEARIKAIKKVMLNQKKKDLRERIKG 327
D ++K+ +E+FLLN I + + + R+K + K + L E I+
Sbjct: 667 DEFKKMLDELFLLNGILNIGDFIPWIHFLDLQGYVK-RMKTLSKKFDRFMEHVLEEHIER 843
Query: 328 RGNIKSQLCKNANEDGEAALEITQQFKLDTKLTKINISKNINSEVAREGGFSNSIYPTYN 387
R N+K + K+ + L++ + L+ KL + + +A GG +S
Sbjct: 844 RKNVKDYVAKDM---VDVLLQLAEDPNLEVKLERHGVKAFTQDLIA--GGTESSAVTVEW 1008
Query: 388 KLDLEVIKREKLRKEASFADRI 409
+ V K E +K DR+
Sbjct: 1009AISELVRKPEIFKKATEELDRV 1074
>CA989549 weakly similar to PIR|A96555|A96 unknown protein [imported] -
Arabidopsis thaliana, partial (25%)
Length = 758
Score = 29.3 bits (64), Expect = 3.0
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = +2
Query: 176 KSKRFREQIFLSWEQCIANAAKKGGCGQEELDWDSYNKIKEQLELQQLLQAEEKEKEKLM 235
K + R+Q + +E I K+ G GQE + + + K L + + + KE +M
Sbjct: 341 KDGKGRKQCYQGYE--IGEFLKRVGFGQETVIYVTQTKWSPDLNSLRHMFPKTYTKENIM 514
Query: 236 AIARAEKFIQSWSECLAK 253
+ + EKF+ S S L K
Sbjct: 515 SATKKEKFLSSESIELEK 568
>TC79376 homologue to GP|13877645|gb|AAK43900.1 Unknown protein {Arabidopsis
thaliana}, partial (29%)
Length = 952
Score = 29.3 bits (64), Expect = 3.0
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Frame = +3
Query: 192 IANAAKKGGCGQEELDWDSYNKIKEQLELQQLLQAEEKEKEKLMAIARAEKFIQSWSECL 251
I KK G E D +NK+ + Q + E K+++ + R I++W +
Sbjct: 234 IDRVLKKVQEGVEVFD-SIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSS 410
Query: 252 AKEAKKGGSGEKELDWDSYEKIQEEMFLLNQIRRTTEKAKAKERARTKAEKEARIKAIKK 311
+ KK + ++ D+ + I+ EM E+ K EKE + KA K
Sbjct: 411 EIKDKKVSASYEQALVDARKLIEREM----------ERFKI-------CEKETKTKAFSK 539
Query: 312 VMLNQK-KKDLRERIKGR---------GNIKSQLCKNANEDGEAALE 348
L Q+ K D RE+ K G ++SQ+ ++ EA LE
Sbjct: 540 EGLGQQPKTDPREKAKSETRDWLNNVVGELESQI-----DNFEAELE 665
>TC79049 weakly similar to PIR|T10798|T10798 pherophorin-S - Volvox carteri,
partial (6%)
Length = 957
Score = 28.9 bits (63), Expect = 3.9
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Frame = -3
Query: 253 KEAKKGGSGEKELDWDSYEKIQEEMFLLNQIRRTTEKAKAKERARTKAEKEARIKAIKKV 312
+E KK G KE+ D +++E + + E K + KAE EAR+K ++K
Sbjct: 931 EEMKKEAEGLKEVLKDKEGRVEE-------LVKEVEGLK-----KVKAESEARVKDLEKR 788
Query: 313 MLNQKKKDLRERIKGRGNIKSQLCKNANEDGEAALEITQQFKLDTKLTKINISKNINSEV 372
+ + K++ ER K R ++ +L E + ++D K+ + + +E
Sbjct: 787 IGVLEMKEIEERNK-RIRVEEELRDTIGE---------KDREIDGFRNKVEELEKVGAEK 638
Query: 373 AREGG-FSNSIYPTYNKLDLEVIKREKLRKEASFADRI 409
E G + N KL E RE K F +I
Sbjct: 637 KDEAGDWLN------EKLSYEKALRESEEKAKGFESQI 542
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.130 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,048,005
Number of Sequences: 36976
Number of extensions: 134878
Number of successful extensions: 754
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of query: 420
length of database: 9,014,727
effective HSP length: 99
effective length of query: 321
effective length of database: 5,354,103
effective search space: 1718667063
effective search space used: 1718667063
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0340.11