TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0230.8
         (334 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86770 similar to GP|13872875|dbj|BAB43982. contains EST AU0965...   582  e-167
AW980815 homologue to GP|13872875|dbj contains EST AU096506(S140...    54  2e-11
TC81684 weakly similar to GP|21593080|gb|AAM65029.1 unknown {Ara...    31  0.76
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr...    30  1.00
TC87277 similar to PIR|T45588|T45588 arm repeat containing prote...    30  1.7
TC85237 similar to GP|4200165|emb|CAA76145.1 neutral invertase {...    29  2.2
AL387992 weakly similar to GP|507345|gb|AA TonB {Haemophilus inf...    29  2.2
BG585180                                                               29  2.9
TC89890 weakly similar to GP|17065226|gb|AAL32767.1 Unknown prot...    28  3.8
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {...    28  4.9
BG644345 weakly similar to GP|19697333|gb putative protein poten...    28  4.9
TC78863 weakly similar to GP|18481710|gb|AAL73532.1 hypothetical...    28  4.9
BE326007 similar to GP|13676415|d hypothetical protein {Glycine ...    28  6.5
TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imp...    28  6.5
TC84617 similar to GP|1151236|gb|AAB68209.1| Lpg18p {Saccharomyc...    28  6.5
TC82232 similar to GP|10177316|dbj|BAB10642. kinesin-like protei...    27  8.4
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel...    27  8.4
BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania maj...    27  8.4
BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich pr...    27  8.4
BQ751031                                                               27  8.4

>TC86770 similar to GP|13872875|dbj|BAB43982. contains EST
           AU096506(S14064)~unknown protein {Oryza sativa (japonica
           cultivar-group)}, partial (73%)
          Length = 2061

 Score =  582 bits (1499), Expect = e-167
 Identities = 293/336 (87%), Positives = 311/336 (92%), Gaps = 2/336 (0%)
 Frame = +2

Query: 1   DDQEGVRNLDDDNFIDDTGVEPGFYGNYNEPSSPGEAPQAEEGEEDDEINDLFKMGKKK- 59
           DD EG RN+DDDNFIDDTGVEP  YG Y+EP SPG+APQAEEGEEDDEI DLFKMGKKK 
Sbjct: 590 DDNEGARNMDDDNFIDDTGVEPALYG-YDEPRSPGDAPQAEEGEEDDEIKDLFKMGKKKK 766

Query: 60  -NERSPAEIALLVENVVAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQLEF 118
            NERSPAEIALLVENV+AELEVTAEEDAELNRQ KPA+NKLKKLPLL EVLSKKQLQLEF
Sbjct: 767 KNERSPAEIALLVENVMAELEVTAEEDAELNRQHKPAVNKLKKLPLLIEVLSKKQLQLEF 946

Query: 119 LDHGVLTLLKNWLEPLPDGSLPNINIRTAILKILNDFPIDLEQIDRREQLKRSGLGKVIM 178
           LDHGVL LLK+WLEPLPDGSLPNINIRTAILKILND PIDLE  DRREQLKRSGLGKVIM
Sbjct: 947 LDHGVLNLLKSWLEPLPDGSLPNINIRTAILKILNDLPIDLEHYDRREQLKRSGLGKVIM 1126

Query: 179 FLSKSDEEINVNRKLTKELVDKWSRPIFNKSTRFEDMRNIEDERAPFRRPSVKKPANKAP 238
           FLS+SDEEINVNR+L K+LVDKWSRPIFNKSTRFEDMRN ED+R P+RRPSVKKPA KA 
Sbjct: 1127FLSRSDEEINVNRRLAKDLVDKWSRPIFNKSTRFEDMRNTEDDRVPYRRPSVKKPAAKAA 1306

Query: 239 GMQSRDSDLDLDLPQPRSGQSSSRQHASRPEATPMDFVIRPQSKVDPEEVRARAKQASHD 298
           GMQSRD DLDLDL QPRSG+SSSRQHASRPEATP+DFVIRPQSK+DP+E+RARAKQA+ D
Sbjct: 1307GMQSRDGDLDLDLSQPRSGESSSRQHASRPEATPLDFVIRPQSKIDPDEIRARAKQATQD 1486

Query: 299 QQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMIKY 334
           Q RMKMNKKLQQLRAPKK+QLQATKLSVEGRGM KY
Sbjct: 1487QHRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMAKY 1594


>AW980815 homologue to GP|13872875|dbj contains EST AU096506(S14064)~unknown
           protein {Oryza sativa (japonica cultivar-group)},
           partial (9%)
          Length = 175

 Score = 53.9 bits (128), Expect(2) = 2e-11
 Identities = 24/26 (92%), Positives = 26/26 (99%)
 Frame = +2

Query: 259 SSSRQHASRPEATPMDFVIRPQSKVD 284
           SSSRQHASRPEATP+DFVIRPQSK+D
Sbjct: 2   SSSRQHASRPEATPLDFVIRPQSKID 79



 Score = 32.3 bits (72), Expect(2) = 2e-11
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 298 DQQRMKMNKKLQQLRAPK 315
           DQ  +KMNKKLQQLRAP+
Sbjct: 120 DQSCLKMNKKLQQLRAPR 173


>TC81684 weakly similar to GP|21593080|gb|AAM65029.1 unknown {Arabidopsis
           thaliana}, partial (29%)
          Length = 732

 Score = 30.8 bits (68), Expect = 0.76
 Identities = 18/59 (30%), Positives = 32/59 (53%), Gaps = 7/59 (11%)
 Frame = +3

Query: 3   QEGVRNLDDDNFIDDTGV------EPGF-YGNYNEPSSPGEAPQAEEGEEDDEINDLFK 54
           +E +  LD+D  +DD G+      +PG  + + +EP  P + P+   GE+ DE +  F+
Sbjct: 273 KEPIPVLDEDPNVDDCGIRLFRHSKPGIVFDHADEPQPPMKRPKLVPGEDIDEKSKKFR 449


>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
           {Arabidopsis thaliana}, partial (50%)
          Length = 753

 Score = 30.4 bits (67), Expect = 1.00
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 1   DDQEGVRNLDDDNFIDDTGVEPGFYGNYNEPSSPGEAPQAEEGEEDDEIND 51
           DD + V + DDDN  D +G E     +  +   P  A  +++ +EDD+ +D
Sbjct: 328 DDDDDVNDEDDDNDEDFSGDEDDEDADPEDDPVPNGAGGSDDDDEDDDDDD 480


>TC87277 similar to PIR|T45588|T45588 arm repeat containing protein homolog
           - Arabidopsis thaliana, partial (48%)
          Length = 1393

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
 Frame = +1

Query: 12  DNFIDDTGVEPGFYGNYNEPSSPGEAPQAEEGEEDDEINDLFKMGKKKNERSPA-EIALL 70
           + + +  G+EP    + +EPS    A    E  + + +      G  +++RS A EI LL
Sbjct: 49  EQWCEANGIEPPKRPSTSEPSKSASACTPAERSKIESLIQKLTSGGPEDQRSAAGEIRLL 228

Query: 71  VENVVAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNW 130
                          A+ N   + AI +   +PLL  +LS    + +  +H V  LL   
Sbjct: 229 ---------------AKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQ--EHAVTALLNLS 357

Query: 131 LEPLPDGSLPNINIRTAILKIL 152
           +     GS+ +      I+ +L
Sbjct: 358 IYESNKGSIVSSGAVPGIVHVL 423


>TC85237 similar to GP|4200165|emb|CAA76145.1 neutral invertase {Daucus
           carota}, partial (68%)
          Length = 2255

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 14/37 (37%), Positives = 22/37 (58%), Gaps = 5/37 (13%)
 Frame = -3

Query: 130 WLEPLP-----DGSLPNINIRTAILKILNDFPIDLEQ 161
           W +PLP     +G LP + ++    KIL++FP  +EQ
Sbjct: 687 WHQPLPWAVAINGLLPTLQLQRVK*KILDNFPFTIEQ 577


>AL387992 weakly similar to GP|507345|gb|AA TonB {Haemophilus influenzae},
           partial (8%)
          Length = 446

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 23/58 (39%), Positives = 32/58 (54%), Gaps = 4/58 (6%)
 Frame = +1

Query: 81  TAEEDAELNRQGKPAINKLKKLPLLT--EVL--SKKQLQLEFLDHGVLTLLKNWLEPL 134
           T  E  +L +  K  +NK +  PLL   E+L   KKQ++ E L+ G L LLK  + PL
Sbjct: 151 TNPESQQLPQLKKHLLNKRRLQPLLRRPELLLHPKKQVKREQLEEGRLPLLKFIINPL 324


>BG585180 
          Length = 589

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 17/57 (29%), Positives = 26/57 (44%)
 Frame = +1

Query: 15  IDDTGVEPGFYGNYNEPSSPGEAPQAEEGEEDDEINDLFKMGKKKNERSPAEIALLV 71
           I DT  +P  +  YN           EEGEE+   +    +GK+    SP +IA ++
Sbjct: 82  ISDTLPKPDLFYKYNNNIIINNGLMLEEGEEEMSRDQSEALGKQLCHASPNDIAKMI 252


>TC89890 weakly similar to GP|17065226|gb|AAL32767.1 Unknown protein
           {Arabidopsis thaliana}, partial (76%)
          Length = 1013

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 22/58 (37%), Positives = 27/58 (45%)
 Frame = -1

Query: 96  INKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILKILN 153
           I K+ KLPLL          L+ L      ++ NW  PLPD     I I+ AILK  N
Sbjct: 767 IFKINKLPLLP---------LDILKSSSK*VISNWPRPLPDDF---IGIKLAILKKSN 630


>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
           thaliana}, partial (39%)
          Length = 883

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 17/57 (29%), Positives = 28/57 (48%), Gaps = 6/57 (10%)
 Frame = +3

Query: 1   DDQEGVRNLDDDNFIDDTGVEPGFYGNYNEPSSPGEAPQA------EEGEEDDEIND 51
           DD + V++ DDD   +D   + G      E   P + P+A      ++GE+DD+  D
Sbjct: 342 DDDDDVQDEDDDGEEEDYSGDEG-----EEEGDPEDDPEANGAGGSDDGEDDDDDGD 497


>BG644345 weakly similar to GP|19697333|gb putative protein potential
           transcriptional repressor Not4hp - Mus musculus, partial
           (7%)
          Length = 635

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 25/97 (25%), Positives = 44/97 (44%), Gaps = 4/97 (4%)
 Frame = +1

Query: 228 PSVKKPAN-KAPGMQSRDSDLDLDLPQPRSGQSSSRQHASRPEATPMDFVIRPQSKVDP- 285
           P  ++P+  + PG Q           Q    Q+  +Q AS P  TP      P S++ P 
Sbjct: 136 PQAQQPSLFQTPGQQQASPFQTPGQQQSSPFQTPGQQQAS-PFQTPGQQQPSPFSQITPF 312

Query: 286 --EEVRARAKQASHDQQRMKMNKKLQQLRAPKKRQLQ 320
             ++ + + +Q    QQ+    ++ QQL+  ++ QLQ
Sbjct: 313 SQQQQQLQFQQQQQQQQQQLQQQQQQQLQQQQQLQLQ 423


>TC78863 weakly similar to GP|18481710|gb|AAL73532.1 hypothetical protein
            {Sorghum bicolor}, partial (13%)
          Length = 1830

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 13/45 (28%), Positives = 24/45 (52%)
 Frame = +1

Query: 6    VRNLDDDNFIDDTGVEPGFYGNYNEPSSPGEAPQAEEGEEDDEIN 50
            +  +DD   +D  GV   +Y   ++ +SP   P++E  E+D + N
Sbjct: 1006 ITGMDDPRSMDKVGVAQQWYDELDDLASPKADPESEVIEDDLDQN 1140


>BE326007 similar to GP|13676415|d hypothetical protein {Glycine max},
           partial (8%)
          Length = 544

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 23/96 (23%), Positives = 43/96 (43%), Gaps = 7/96 (7%)
 Frame = +1

Query: 10  DDDNF-IDDTGVEPGFYGNYNE------PSSPGEAPQAEEGEEDDEINDLFKMGKKKNER 62
           DDD F I++     G + ++ E      PSS  +       E+D E +   +      + 
Sbjct: 58  DDDIFEIENGKARGGGFDSFKEGDADCSPSSSWKRVDNNTDEDDSEDSGSDRAESSSPDA 237

Query: 63  SPAEIALLVENVVAELEVTAEEDAELNRQGKPAINK 98
           S A+I  +++ +   L+V A + A L+  G  A ++
Sbjct: 238 SMADIMPMLDELHPLLDVDAPQPAHLSHDGSDAASE 345


>TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
           Arabidopsis thaliana, partial (64%)
          Length = 1669

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = +2

Query: 258 QSSSRQHASRPEATPMDFVIRPQSKVD-----PEEVRARAKQASHDQQRMKMNKKLQQLR 312
           Q+S   H+  P  +P    +RPQ  ++     PEE  +      HD  R KM++    +R
Sbjct: 122 QNSPSTHSFSPNNSPGS-TLRPQHSLEFVNGSPEEEDSYLIYHDHDDLRHKMSELESVMR 298

Query: 313 APKKRQLQATKLSVE 327
            P    L+     V+
Sbjct: 299 GPNVEMLEMYDTKVQ 343


>TC84617 similar to GP|1151236|gb|AAB68209.1| Lpg18p {Saccharomyces
           cerevisiae}, partial (86%)
          Length = 769

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 25/98 (25%), Positives = 39/98 (39%)
 Frame = +1

Query: 203 RPIFNKSTRFEDMRNIEDERAPFRRPSVKKPANKAPGMQSRDSDLDLDLPQPRSGQSSSR 262
           R  FN S   +D+R     R    +   KKP  KAP +Q   + L L   + R      R
Sbjct: 361 RKFFNLSKE-DDVRKFVIRREITPKNQNKKPYTKAPKIQRLVTPLTLQRKRHRISLKRRR 537

Query: 263 QHASRPEATPMDFVIRPQSKVDPEEVRARAKQASHDQQ 300
             A++      D ++  ++K   E      K+ S  Q+
Sbjct: 538 AKAAKAAKEEYDVLLAKRNKEQKERKADLKKRRSAVQK 651


>TC82232 similar to GP|10177316|dbj|BAB10642. kinesin-like protein
           {Arabidopsis thaliana}, partial (21%)
          Length = 1181

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 18/73 (24%), Positives = 34/73 (45%)
 Frame = +3

Query: 244 DSDLDLDLPQPRSGQSSSRQHASRPEATPMDFVIRPQSKVDPEEVRARAKQASHDQQRMK 303
           DSD DL L           +++S  +  P+D       ++  +E+   + Q   D++  +
Sbjct: 51  DSD-DLGLQSKTGLFGDGNEYSSDCDVKPVDITDVEPVEIHEKELEHSSAQQKLDRELKE 227

Query: 304 MNKKLQQLRAPKK 316
           ++KKL+Q  A  K
Sbjct: 228 LDKKLEQKEAEMK 266


>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
           herpesvirus 3}, partial (8%)
          Length = 986

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 18/49 (36%), Positives = 25/49 (50%), Gaps = 1/49 (2%)
 Frame = +3

Query: 1   DDQEGV-RNLDDDNFIDDTGVEPGFYGNYNEPSSPGEAPQAEEGEEDDE 48
           DD++G  ++ DDD   DD   E G  G  +E     E    EE E++DE
Sbjct: 603 DDEDGDDQDEDDDEDEDDDDEEEG--GEEDEEEGVDEEDNEEEEEDEDE 743


>BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania major}, partial
           (1%)
          Length = 766

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 28/95 (29%), Positives = 40/95 (41%), Gaps = 5/95 (5%)
 Frame = +2

Query: 223 APFRRPSVKKPANKAPGMQSRDSDLDLDLPQPRSGQSSSRQHAS-RPEATPMDFVIRP-- 279
           AP RR    +PA +          LDL L QPR      R HA   P  T ++   R   
Sbjct: 215 APRRRLPHPRPAPR----------LDLHLHQPRHRVRRQRHHAQHHPHPTVLERHRRRHP 364

Query: 280 -QSKVDPEEVRARAKQASH-DQQRMKMNKKLQQLR 312
            + +  P + RAR  +  H  + R ++ +   QLR
Sbjct: 365 LRREAQPHDPRARGPEGQHPGRHRGRLRRGPVQLR 469


>BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich protein -
           Arabidopsis thaliana, partial (7%)
          Length = 680

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 17/82 (20%), Positives = 29/82 (34%)
 Frame = +1

Query: 191 RKLTKELVDKWSRPIFNKSTRFEDMRNIEDERAPFRRPSVKKPANKAPGMQSRDSDLDLD 250
           R +T+       RP    +TR       +    P  RP+ ++     P   +R +     
Sbjct: 361 RPMTRRTTRPTPRPTTRPTTRHTTRLTTKPTPRPTTRPTTRRTTRPTPRPTTRPTTRRTT 540

Query: 251 LPQPRSGQSSSRQHASRPEATP 272
            P PR     + +  +RP   P
Sbjct: 541 RPTPRPTTRPTTRLMTRPTTRP 606


>BQ751031 
          Length = 278

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = +2

Query: 227 RPSVKKPANKAPGMQSRD---SDLDLDLPQPRSGQSSSRQHASRPEATPM 273
           RP    P    P M S     S  D   P+P    SS RQ ASR    P+
Sbjct: 11  RPCSAPPQRPVPSMASTTAPRSPTDALKPRPTLSPSSRRQRASRAPMAPL 160


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.312    0.133    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,568,061
Number of Sequences: 36976
Number of extensions: 89330
Number of successful extensions: 467
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of query: 334
length of database: 9,014,727
effective HSP length: 97
effective length of query: 237
effective length of database: 5,428,055
effective search space: 1286449035
effective search space used: 1286449035
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)