Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0216.15
         (500 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC84540 similar to GP|21539577|gb|AAM53341.1 unknown protein {Ar...   182  3e-70
TC93533 similar to GP|17065464|gb|AAL32886.1 Unknown protein {Ar...   148  1e-45
BG647860 weakly similar to GP|17065464|gb Unknown protein {Arabi...   131  5e-31
TC83580 similar to GP|1666171|emb|CAA70322.1 unknown {Nicotiana ...   126  2e-29
BE323343 similar to GP|1666171|emb unknown {Nicotiana plumbagini...   103  1e-22
TC81105 weakly similar to PIR|F84721|F84721 probable RING zinc f...    92  4e-19
TC79923 similar to PIR|T04748|T04748 hypothetical protein T16H5....    85  7e-17
TC84538 weakly similar to GP|22296418|dbj|BAC10186. similar to p...    80  2e-15
AL377374 weakly similar to GP|8885575|dbj| emb|CAB75487.1~gene_i...    46  3e-05
TC92690 weakly similar to GP|15292861|gb|AAK92801.1 unknown prot...    40  0.003
AW774293 similar to GP|13881624|gb PPE family protein {Mycobacte...    33  0.25
BI270687 weakly similar to GP|1903347|gb EST gb|ATTS5672 comes f...    32  0.74
BI271696 weakly similar to GP|21593120|gb putative splicing regu...    30  2.8
TC78781 weakly similar to PIR|T02291|T02291 hypothetical protein...    30  2.8
TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Ar...    30  2.8
TC92888 similar to GP|3219304|dbj|BAA28847.1 MUS38 {Neurospora c...    30  2.8
TC85908 similar to GP|11385445|gb|AAG34805.1 glutathione S-trans...    29  3.7
TC78451 similar to GP|9279625|dbj|BAB01083.1 gb|AAF23830.1~gene_...    29  3.7
TC79476 similar to GP|14423560|gb|AAK62462.1 Unknown protein {Ar...    29  3.7
TC80294 similar to PIR|T47806|T47806 hypothetical protein F24G16...    29  3.7

>TC84540 similar to GP|21539577|gb|AAM53341.1 unknown protein {Arabidopsis
           thaliana}, partial (38%)
          Length = 1027

 Score =  182 bits (462), Expect(2) = 3e-70
 Identities = 81/152 (53%), Positives = 107/152 (70%), Gaps = 2/152 (1%)
 Frame = +3

Query: 157 LTLRCPDPSCDVAVDRDMIRELASESSKVMYEQFLLWSYVDSKAKMRWCPAPGCDYVVCY 216
           L LRCPDP+C  AVD+DMI   AS   K  YE++L+ SY++   K +WCPAPGC++ V +
Sbjct: 582 LMLRCPDPACAAAVDQDMIDAFASAEDKKKYERYLVRSYIEVNKKTKWCPAPGCEHAVNF 761

Query: 217 QGDGGCARDLDVTCLCYHSFCWRCGEESHSPVDCETAGRWMKKIDKSTSENGKWILAHTK 276
             D G   + DV+CLC +SFCW C E++H PVDC+T  +W+ K + + SEN  WILA+TK
Sbjct: 762 --DAG-DENYDVSCLCSYSFCWNCTEDAHRPVDCDTVSKWILK-NSAESENTNWILAYTK 929

Query: 277 PCPRCKSLIEKNQGFKYMTCK--CGFQFCWVC 306
           PCP+CK  IEKN+G  +MTC   C FQFCW+C
Sbjct: 930 PCPKCKRSIEKNRGCMHMTCSAPCRFQFCWLC 1025



 Score =  101 bits (252), Expect(2) = 3e-70
 Identities = 52/119 (43%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
 Frame = +2

Query: 38  NFTILSELEIKRLQEDAINKVASVLCIPDASACFLLCHNLWNVTKVLESWCEDEEKVQKA 97
           NF+IL E +I+  QED I  VA+VL IP  +A  LL H  WNV+ V E+W  DE+ V++ 
Sbjct: 215 NFSILKESDIRERQEDDIRSVAAVLSIPPVAASILLRHYNWNVSNVNEAWFADEDGVRRK 394

Query: 98  AGLLNQPKVE----IDWLKDLCQVCFRSSEKGKILSAGCAHPLCEACWMDYIDTNINKG 152
            GLL +P  +        K  C +CF +    KI +A C HP C +CW  YI T+IN G
Sbjct: 395 VGLLEKPAYKNPDANKMPKLTCGICFEAYRPSKIHTASCGHPYCSSCWGGYIGTSINDG 571


>TC93533 similar to GP|17065464|gb|AAL32886.1 Unknown protein {Arabidopsis
           thaliana}, partial (38%)
          Length = 660

 Score =  148 bits (373), Expect(2) = 1e-45
 Identities = 66/134 (49%), Positives = 87/134 (64%)
 Frame = +3

Query: 139 ACWMDYIDTNINKGPSKCLTLRCPDPSCDVAVDRDMIRELASESSKVMYEQFLLWSYVDS 198
           +CW  YI T+IN GP  CL LRCP+P+C  A+ +DMI  LA    K  Y ++L  SY++ 
Sbjct: 6   SCWEGYISTSINDGPG-CLMLRCPEPTCGAAIGQDMIDLLACNEDKEKYARYLRRSYIED 182

Query: 199 KAKMRWCPAPGCDYVVCYQGDGGCARDLDVTCLCYHSFCWRCGEESHSPVDCETAGRWMK 258
             K +WCPAPGC+Y V +   GG   + DV+CLC +SFCW C EE+H PVDC T  +W+ 
Sbjct: 183 NKKSKWCPAPGCEYAVTFDAGGG---NYDVSCLCSYSFCWNCTEEAHRPVDCGTVVKWIM 353

Query: 259 KIDKSTSENGKWIL 272
           K + + SEN  WIL
Sbjct: 354 K-NSAESENMNWIL 392



 Score = 53.9 bits (128), Expect(2) = 1e-45
 Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = +1

Query: 273 AHTKPCPRCKSLIEKNQGFKYMTC--KCGFQFCWVC 306
           A++KPCP+CK  IEKNQG  ++TC   C F+FCW+C
Sbjct: 394 ANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLC 501


>BG647860 weakly similar to GP|17065464|gb Unknown protein {Arabidopsis
           thaliana}, partial (23%)
          Length = 719

 Score =  131 bits (330), Expect = 5e-31
 Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
 Frame = +3

Query: 38  NFTILSELEIKRLQEDAINKVASVLCIPDASACFLLCHNLWNVTKVLESWCEDEEKVQKA 97
           NF IL E +I+  QED I+ +A+VL IP  +A  LL H  WNV+ V ++W  DE++V++ 
Sbjct: 273 NFAILKESDIRDRQEDDISSLATVLSIPPVAASILLRHYNWNVSNVNDAWFADEDRVRRK 452

Query: 98  AGLLNQPKVEIDWLKDL-CQVCFRSSEKGKILSAGCAHPLCEACWMDYIDTNINKGPSKC 156
            GLL +P  E    K+L C +CF +    KI +A C HP C +CW  YI T+IN GP  C
Sbjct: 453 VGLLEKPVYENPDAKELTCGICFEAYRPSKIHNASCGHPYCFSCWGGYIGTSINDGPG-C 629

Query: 157 LTLRCPDPSCDVAVDR 172
           L LRCPDP+C  AVD+
Sbjct: 630 LMLRCPDPACGAAVDQ 677


>TC83580 similar to GP|1666171|emb|CAA70322.1 unknown {Nicotiana
           plumbaginifolia}, partial (49%)
          Length = 1022

 Score =  126 bits (316), Expect = 2e-29
 Identities = 68/153 (44%), Positives = 94/153 (60%), Gaps = 4/153 (2%)
 Frame = +2

Query: 347 KKCNHYYECWARNDFLSKSILQKLIDLDRKY---LSMSLQKRETYFDFVKKAWQQIAECR 403
           ++  HYYE WA N    +  L  L  +   +   LS +  + E+   F+ +AW QI ECR
Sbjct: 17  ERYTHYYERWASNQSSRQKALADLHQMQTVHMEKLSDTQCQPESQLKFITEAWLQIVECR 196

Query: 404 RILKWTNVYGYFLPKNEKAKKQFSEYIQVEAEVALEKLQQCAKVEETMF-QDNYPEESLN 462
           R+LKWT  YGY+L ++E AKKQF EY+Q EAE  LE+L QCA+ E  +F     P +  N
Sbjct: 197 RVLKWTYAYGYYLAEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQVFLSAEGPSKEFN 376

Query: 463 KFQEKVIHLTDVTKIYFENLLRAFEDGLDKVEA 495
            F+ K+  LT VTK +FENL+RA E+GL  V++
Sbjct: 377 DFRTKLAGLTSVTKNFFENLVRALENGLCDVDS 475


>BE323343 similar to GP|1666171|emb unknown {Nicotiana plumbaginifolia},
           partial (34%)
          Length = 413

 Score =  103 bits (258), Expect = 1e-22
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = +3

Query: 401 ECRRILKWTNVYGYFLPKNEKAKKQFSEYIQVEAEVALEKLQQCAKVEETMF-QDNYPEE 459
           ECRR+LKWT  YGY+LP++E AKKQF EY+Q EAE  LE+L QCA+ E   F       +
Sbjct: 3   ECRRVLKWTYAYGYYLPEHEGAKKQFFEYLQGEAESGLERLHQCAEKELQQFLTAEGQSK 182

Query: 460 SLNKFQEKVIHLTDVTKIYFENLLRAFEDGLDKVEA 495
             N F+ K+  LT VTK YFENL+RA E+GL  V+A
Sbjct: 183 EFNDFRTKLAGLTSVTKNYFENLVRALENGLSDVDA 290


>TC81105 weakly similar to PIR|F84721|F84721 probable RING zinc finger
           protein [imported] - Arabidopsis thaliana, partial (23%)
          Length = 683

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 47/111 (42%), Positives = 68/111 (60%), Gaps = 1/111 (0%)
 Frame = +3

Query: 31  EEEDKRENFTILSELEIKRLQEDAINKVASVLCIPDASACFLLCHNLWNVTKVLESWCED 90
           E     +NFTIL E +I+  QED I++VA+VL +   +A  LL H+ W+V+KV ++W  D
Sbjct: 351 ESRRPEQNFTILKESDIRVRQEDDIDRVAAVLSVSRVAASILLRHHNWSVSKVHDAWVAD 530

Query: 91  EEKVQKAAGLLNQPKVEIDWLKDL-CQVCFRSSEKGKILSAGCAHPLCEAC 140
           EE+V KA GLL +P V+     +L C +CF +  +  I  A C HP C +C
Sbjct: 531 EERVXKAVGLLEKPVVQHPNTSELTCGICFENYPRSGIGMASCGHPYCFSC 683


>TC79923 similar to PIR|T04748|T04748 hypothetical protein T16H5.30 -
           Arabidopsis thaliana, partial (28%)
          Length = 1001

 Score = 84.7 bits (208), Expect = 7e-17
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 17/227 (7%)
 Frame = +2

Query: 97  AAGLLNQPKVEIDWLKDLCQVCFRSSEKGKILSAGCAHPLCEACWMDYIDTNINKGPSKC 156
           A GL+  P V  + L + C +C        +++  C+H  C  C   Y D     G  +C
Sbjct: 224 AMGLVTFP-VNDEKLLENCSICCDDKPVPMMITLKCSHTFCSHCLRSYAD-----GKLQC 385

Query: 157 --LTLRCPDPSCDVAVDRDMIRELASESSKVMYEQFLLWSYVDSKAKMRWCPAPGCDYVV 214
             + +RCP P C   +     +      S    E+ L  + + ++++  +CP P C  ++
Sbjct: 386 CQVPIRCPQPGCRYCISTPECKSFLPFISFESLEKALSEANI-AQSERFYCPFPNCSVLL 562

Query: 215 ----CYQGDGGCARDLDVTCL----CYHSFCWRCGEESHSPVDCETAGRWMKKIDKST-- 264
               C     G +   D +C+    C    C  CG   HS + CE      ++   ++  
Sbjct: 563 DPCECLSAMDGSSSQSDNSCIECPVCQRFICVGCGVPWHSSMSCEEFQSLPEEERDASDI 742

Query: 265 -----SENGKWILAHTKPCPRCKSLIEKNQGFKYMTCKCGFQFCWVC 306
                ++N +W     K C +C+ +IE  QG  +MTC+CG +FC+ C
Sbjct: 743 TLHRLAQNKRW-----KRCQQCRIMIELTQGCYHMTCRCGHEFCYSC 868



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 14/44 (31%), Positives = 20/44 (44%), Gaps = 1/44 (2%)
 Frame = +2

Query: 228 VTCLCYHSFCWRCGEE-SHSPVDCETAGRWMKKIDKSTSENGKW 270
           +TC C H FC+ CG E       C+ A      +  S  E+ +W
Sbjct: 830 MTCRCGHEFCYSCGAEYRDGQQTCQCAFWDEDSLTNSLQESEQW 961


>TC84538 weakly similar to GP|22296418|dbj|BAC10186. similar to pre-mRNA
           splicing factor ATP-dependent RNA helicase, partial
           (11%)
          Length = 973

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 61/214 (28%), Positives = 87/214 (40%), Gaps = 5/214 (2%)
 Frame = +2

Query: 115 CQVCFRSSEKGKILSAGCAHPLCEACWMDYIDTNI-NKG--PSKCLTLRCPDPSCDVAVD 171
           C +C    E G  L  GC H  C  C ++  ++ I N+G  P  C    C DP     + 
Sbjct: 293 CPICLCEVEDGYKLE-GCGHLFCRLCLVEQCESAIKNQGSFPICCAHQGCGDP----ILL 457

Query: 172 RDMIRELASESSKVMYEQFLLWSYVDSKAKMRWCPAPGCDYVVCYQGDGGCARDLDVTCL 231
            D    L+++    ++   L      S    R+CP+P C  V     D   A +  V   
Sbjct: 458 TDFRTLLSNDKLDELFRASLGAFVASSSGTYRFCPSPDCPSVYRV-ADSDTASEPFVCGA 634

Query: 232 CYHSFCWRCGEESHSPVDCETAGRWMKKIDKSTSENGKWILA--HTKPCPRCKSLIEKNQ 289
           CY   C +C  E H  + CE   R+ +  D   S   +W       K C  C  +IEK  
Sbjct: 635 CYSETCTKCHLEYHPYLSCE---RYRELKDDPDSSLKEWCKGKEQVKSCFACGQIIEKID 805

Query: 290 GFKYMTCKCGFQFCWVCFHEQLKCESRSCSPFIR 323
           G  ++ CKCG   CWVC   ++   S  C   +R
Sbjct: 806 GCNHVECKCGKHVCWVCL--EIFTSSDECYDHLR 901


>AL377374 weakly similar to GP|8885575|dbj|
           emb|CAB75487.1~gene_id:F15L12.13~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (7%)
          Length = 386

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 24/75 (32%), Positives = 35/75 (46%)
 Frame = +3

Query: 262 KSTSENGKWILAHTKPCPRCKSLIEKNQGFKYMTCKCGFQFCWVCFHEQLKCESRSCSPF 321
           KS +    W     K C +C  +IE  +G  +MTC+CGF+FC+ C  E    ++    P 
Sbjct: 36  KSLASRSLW-----KQCVKCNHMIELAEGCYHMTCRCGFEFCYKCGAEWKDKKATCSCPL 200

Query: 322 IRMHIMEFQGTDGEE 336
                +  Q  D EE
Sbjct: 201 WEEDNIWLQDRDDEE 245


>TC92690 weakly similar to GP|15292861|gb|AAK92801.1 unknown protein
           {Arabidopsis thaliana}, partial (15%)
          Length = 629

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
 Frame = +2

Query: 51  QEDAINKVASVLCIPDASACFLLCHNLWNVTKVLESWCEDEEKVQKAAGLLNQPKVEIDW 110
           Q++ + +V  +L +    A  +L ++ W+V K+ E + E  +     A +  Q  V +D 
Sbjct: 326 QKEDLRRVMDMLSVRQEHARIMLIYHRWDVEKLFEVYVEKGK-----AFMFAQAGVSVDE 490

Query: 111 LKD---------LCQVCFRSSEKGKILSAGCAHPLCEACWMDY 144
             D         +C++C       +     C H  C  CW  +
Sbjct: 491 YHDSGSLDSAIVMCEICMDDIPSDEATRMDCGHCFCNTCWTQH 619


>AW774293 similar to GP|13881624|gb PPE family protein {Mycobacterium
           tuberculosis CDC1551}, partial (1%)
          Length = 597

 Score = 33.1 bits (74), Expect = 0.25
 Identities = 19/60 (31%), Positives = 26/60 (42%)
 Frame = -1

Query: 198 SKAKMRWCPAPGCDYVVCYQGDGGCARDLDVTCLCYHSFCWRCGEESHSPVDCETAGRWM 257
           +K  M  C  P C    CY     C+R    +C C   FCW+C    HS  + +  G W+
Sbjct: 411 TKCSMPGCCCPKCSLPCCYPK---CSRP---SC-CMSCFCWQCFMGKHSGRNGKQRG*WL 253


>BI270687 weakly similar to GP|1903347|gb EST gb|ATTS5672 comes from this
           gene. {Arabidopsis thaliana}, partial (17%)
          Length = 665

 Score = 31.6 bits (70), Expect = 0.74
 Identities = 23/90 (25%), Positives = 44/90 (48%)
 Frame = +3

Query: 364 KSILQKLIDLDRKYLSMSLQKRETYFDFVKKAWQQIAECRRILKWTNVYGYFLPKNEKAK 423
           K I + ++ L ++   ++ ++R+ Y   +KK W  IA     L   N YG+ L      K
Sbjct: 102 KDISEFMLHLAQEAEDLASKERQNYSPILKK-WNAIAAALAALTLNNCYGHVL------K 260

Query: 424 KQFSEYIQVEAEVALEKLQQCAKVEETMFQ 453
           +  SE   +  E+ +  LQ+  ++E+ + Q
Sbjct: 261 QYLSEIKSITVELII-VLQKAKRLEDILVQ 347


>BI271696 weakly similar to GP|21593120|gb putative splicing regulatory
           protein {Arabidopsis thaliana}, partial (66%)
          Length = 690

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +1

Query: 287 KNQGF-KYMTCKCGF----QFCWVCFHEQLKCESRS 317
           K  GF K   C CG     + CW+C HEQ  C +RS
Sbjct: 484 KISGF*KNKVCLCGC*AKGK*CWICNHEQSLCINRS 591


>TC78781 weakly similar to PIR|T02291|T02291 hypothetical protein T13D8.28 -
           Arabidopsis thaliana, partial (12%)
          Length = 1300

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 16/54 (29%), Positives = 26/54 (47%)
 Frame = +3

Query: 11  SHGLVCGLRERDKNLPNTEEEEEDKRENFTILSELEIKRLQEDAINKVASVLCI 64
           S  L C L   + NL N  EEEED  +  + LS+  + R+  +   + +   C+
Sbjct: 51  SQSLTCSLFPSNPNLLNMAEEEEDGEDRISSLSDDLLVRILSNLHTRESVSTCV 212


>TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Arabidopsis
           thaliana}, partial (71%)
          Length = 974

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 19/71 (26%), Positives = 32/71 (44%)
 Frame = +2

Query: 197 DSKAKMRWCPAPGCDYVVCYQGDGGCARDLDVTCLCYHSFCWRCGEESHSPVDCETAGRW 256
           DS+  +   P PG         DG  ARD       + + C+RCGE  H   +C+ + + 
Sbjct: 311 DSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGD--WKNKCYRCGERGHIEKNCKNSPKK 484

Query: 257 MKKIDKSTSEN 267
           + +  +S S +
Sbjct: 485 LSRHARSVSRS 517


>TC92888 similar to GP|3219304|dbj|BAA28847.1 MUS38 {Neurospora crassa},
           partial (23%)
          Length = 703

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 230 CLCYHSFCWRCGEESHSPVDCETAGRWMKKIDKST 264
           C C  S  WR G  +  P+ C    R + K D+ T
Sbjct: 486 CACVLSILWRVGRRAALPLGCAARKRCLYKADQGT 590


>TC85908 similar to GP|11385445|gb|AAG34805.1 glutathione S-transferase GST
           15 {Glycine max}, partial (65%)
          Length = 970

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 10/18 (55%), Positives = 13/18 (71%)
 Frame = +2

Query: 76  NLWNVTKVLESWCEDEEK 93
           NLW   KV+E WC D++K
Sbjct: 530 NLWERLKVIEDWCLDDKK 583


>TC78451 similar to GP|9279625|dbj|BAB01083.1
            gb|AAF23830.1~gene_id:MOJ10.9~strong similarity to
            unknown protein {Arabidopsis thaliana}, partial (88%)
          Length = 2452

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 114  LCQVCFRSSEKGKILSAGCAHPLCEAC 140
            +C  C R+ EK      GC  P+CE C
Sbjct: 1567 VCANCCRNDEKTDFTVRGCQTPVCEPC 1487


>TC79476 similar to GP|14423560|gb|AAK62462.1 Unknown protein {Arabidopsis
           thaliana}, partial (43%)
          Length = 956

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 29  EEEEEDKRENFTILSELEIKRLQEDAINKVASVLCIPD 66
           EEEEE++  N    +   +K+   + +N++AS +  PD
Sbjct: 87  EEEEEEETNNLKHRNTKPVKQTLPEVLNRLASTILFPD 200


>TC80294 similar to PIR|T47806|T47806 hypothetical protein F24G16.90 -
           Arabidopsis thaliana, partial (22%)
          Length = 985

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 17/52 (32%), Positives = 25/52 (47%)
 Frame = +3

Query: 275 TKPCPRCKSLIEKNQGFKYMTCKCGFQFCWVCFHEQLKCESRSCSPFIRMHI 326
           ++   RC     K+ G  +    C F+ C  CFHEQ     ++CS   R+HI
Sbjct: 567 SRSAERCAECCAKS*GCDFRDWSC-FESC--CFHEQSGLGQQTCSLERRVHI 713


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.136    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,423,881
Number of Sequences: 36976
Number of extensions: 371436
Number of successful extensions: 2329
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of query: 500
length of database: 9,014,727
effective HSP length: 100
effective length of query: 400
effective length of database: 5,317,127
effective search space: 2126850800
effective search space used: 2126850800
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)


Lotus: description of TM0216.15