BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0197.11
(301 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81207 similar to GP|21322752|dbj|BAB78536. cold shock protein-... 238 3e-63
TC84888 similar to GP|21322752|dbj|BAB78536. cold shock protein-... 143 7e-35
TC90933 similar to SP|P27484|GRP2_NICSY Glycine-rich protein 2. ... 123 1e-28
TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finge... 99 2e-21
TC76707 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulat... 79 2e-15
TC89725 similar to PIR|T05494|T05494 glycine-rich protein T19K4.... 79 3e-15
BQ151059 similar to GP|7291525|gb|A CG9888-PA {Drosophila melano... 69 2e-12
TC76706 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulat... 67 1e-11
TC87868 similar to PIR|T05112|T05112 splicing factor 9G8-like SR... 66 2e-11
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 64 7e-11
BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10.... 60 1e-09
AJ388976 similar to PIR|E84638|E84 probable RSZp22 splicing fact... 60 1e-09
TC76705 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulat... 59 2e-09
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 59 3e-09
TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Ar... 57 7e-09
TC87201 similar to PIR|F86388|F86388 hypothetical protein AAG292... 57 7e-09
TC82733 similar to GP|10177404|dbj|BAB10535. gene_id:K24M7.12~pi... 57 9e-09
TC76704 homologue to SP|Q09134|GRPA_MEDFA Abscisic acid and envi... 57 9e-09
TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear prot... 56 2e-08
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 54 6e-08
>TC81207 similar to GP|21322752|dbj|BAB78536. cold shock protein-1 {Triticum
aestivum}, partial (39%)
Length = 630
Score = 238 bits (606), Expect = 3e-63
Identities = 124/198 (62%), Positives = 138/198 (69%), Gaps = 18/198 (9%)
Frame = +3
Query: 7 SGVVQWFNNVKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDLVEFSIATGDNDKTKA 66
+GVVQWFNN KGFGFIKPDD EDLFVHQS IRS+G+R+L EGD VEF+IA GDN KTKA
Sbjct: 57 AGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGKTKA 236
Query: 67 VDVTGPNGAALQPTRKDSAPRGFG--GWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCH 124
VDVTGP G LQ R+D+ G G G+RGGERRN GGGGCY CGDTGH+ARDC
Sbjct: 237 VDVTGPKGEPLQ-VRQDNHGGGGGGRGFRGGERRN------GGGGCYTCGDTGHIARDCD 395
Query: 125 RSNNN------GGGGGG---AACYNCGDAGHLARDCNR--SNNNSGGGGAG-----CYNC 168
RS+ N GGGGGG ACY CG H ARDC R NNN+GGGG G CY C
Sbjct: 396 RSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRC 575
Query: 169 GDTGHLARDCNRSNNSGG 186
G GH+ARDC ++ GG
Sbjct: 576 GGVGHIARDCATPSSGGG 629
Score = 107 bits (266), Expect = 7e-24
Identities = 57/120 (47%), Positives = 65/120 (53%), Gaps = 24/120 (20%)
Frame = +3
Query: 180 RSNNSGGGGGG-----------GGACYTCGGFGHLARDCMRG--------GNGGGGGPGS 220
R +N GGGGGG GG CYTCG GH+ARDC R GGGGG
Sbjct: 276 RQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRD 455
Query: 221 ASCFRCGGIGHMARDCATAKGPSS---GGVGGGG--CFRCGEVGHLARDCDGGVAVSGGG 275
+C+ CG H ARDC G ++ GG GGGG C+RCG VGH+ARDC SGGG
Sbjct: 456 RACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDC--ATPSSGGG 629
Score = 65.5 bits (158), Expect = 2e-11
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 208 MRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGCFRCGEVGHLARDCDG 267
+R N GGGG G FR G + GGGGC+ CG+ GH+ARDCD
Sbjct: 273 VRQDNHGGGGGGRG--FRGGERRN----------------GGGGCYTCGDTGHIARDCDR 398
Query: 268 GVAV-----SGGGGNAGRN-TCFNCGKPGHFARECIEASG 301
SGGGG R+ C+ CG HFAR+C+ G
Sbjct: 399 SDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGG 518
>TC84888 similar to GP|21322752|dbj|BAB78536. cold shock protein-1 {Triticum
aestivum}, partial (58%)
Length = 612
Score = 143 bits (361), Expect = 7e-35
Identities = 94/212 (44%), Positives = 113/212 (52%)
Frame = +2
Query: 4 ERFSGVVQWFNNVKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDLVEFSIATGDNDK 63
E+ +G V+WFN+ KGFGFI PD GGEDLFVHQ+SI++DG+R+L EG+ VEF + GD+ +
Sbjct: 53 EKQTGTVKWFNSTKGFGFISPDGGGEDLFVHQTSIKTDGFRSLAEGEAVEFIVEAGDDGR 232
Query: 64 TKAVDVTGPNGAALQPTRKDSAPRGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDC 123
TKA+DVTGPNGA Q APR G+ GG GG GGGG GG Y D G+
Sbjct: 233 TKAIDVTGPNGAPPQ-----GAPRQEMGYGGG----GGRGGGGYGGGY---DQGY----- 361
Query: 124 HRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNN 183
GGGGG+ Y G G GG G G Y
Sbjct: 362 -------GGGGGS--YGGGFGG----------GRGGGRGGGGY----------------X 436
Query: 184 SGGGGGGGGACYTCGGFGHLARDCMRGGNGGG 215
GG GGGGG Y GG+G +GG GGG
Sbjct: 437 QGGYGGGGG--YXQGGYGG------QGGYGGG 508
Score = 36.2 bits (82), Expect = 0.016
Identities = 35/111 (31%), Positives = 39/111 (34%)
Frame = +2
Query: 169 GDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGG 228
G G + R GGGGG G GG+ +G GGGG G GG
Sbjct: 254 GPNGAPPQGAPRQEMGYGGGGGRGGGGYGGGYD-------QGYGGGGGSYG-------GG 391
Query: 229 IGHMARDCATAKGPSSGGVGGGGCFRCGEVGHLARDCDGGVAVSGGGGNAG 279
G G GG GGGG + G G GG G GG G
Sbjct: 392 FG----------GGRGGGRGGGGYXQGGYGG------GGGYXQGGYGGQGG 496
>TC90933 similar to SP|P27484|GRP2_NICSY Glycine-rich protein 2. [Wood
tobacco] {Nicotiana sylvestris}, partial (44%)
Length = 368
Score = 123 bits (308), Expect = 1e-28
Identities = 58/109 (53%), Positives = 80/109 (73%)
Frame = +3
Query: 1 MAEERFSGVVQWFNNVKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDLVEFSIATGD 60
M+ + +G V+WFN+ KGFGFI PDDG E+LFVHQS I++DG+R+L EG+ VE+ I + +
Sbjct: 57 MSGSKLTGKVKWFNDQKGFGFITPDDGSEELFVHQSQIQTDGFRSLAEGESVEYQIESDN 236
Query: 61 NDKTKAVDVTGPNGAALQPTRKDSAPRGFGGWRGGERRNGGGGGGGGGG 109
+ ++KAV VTGP+GA++Q +R+ GG GG R GGG GGGGGG
Sbjct: 237 DGRSKAVSVTGPDGASVQGSRRG------GGGGGGYERGGGGYGGGGGG 365
Score = 28.9 bits (63), Expect = 2.5
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = +3
Query: 186 GGGGGGGACYTCGGFGHLARDCMRGGNGGGGG 217
GGGGGGG Y GG GG GGGGG
Sbjct: 303 GGGGGGG--YERGG----------GGYGGGGG 362
>TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finger protein
{Oryza sativa (japonica cultivar-group)}, partial (96%)
Length = 1286
Score = 99.0 bits (245), Expect = 2e-21
Identities = 67/200 (33%), Positives = 80/200 (39%), Gaps = 13/200 (6%)
Frame = +1
Query: 110 CYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCG 169
C+NC + GH+A C N G C+ CG AGH AR+C G C NC
Sbjct: 538 CWNCKEPGHMASSCP---NEG------ICHTCGKAGHRARECTVPQKPPGDLRL-CNNCY 687
Query: 170 DTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGI 229
GH+A +C AC C GHLARDC P C C
Sbjct: 688 KQGHIAVECTNEK----------ACNNCRKTGHLARDC----------PNDPICNLCNIS 807
Query: 230 GHMARDCATAK--------GPSSGGVGGGG-----CFRCGEVGHLARDCDGGVAVSGGGG 276
GH+AR C + G GG GG C C + GH++RDC GG +
Sbjct: 808 GHVARQCPKSNVIGDRGGGGSLRGGYRDGGFRDVVCRSCQQFGHMSRDCMGGPLM----- 972
Query: 277 NAGRNTCFNCGKPGHFAREC 296
C NCG GH A EC
Sbjct: 973 -----ICQNCGGRGHQAYEC 1017
Score = 86.3 bits (212), Expect = 1e-17
Identities = 58/163 (35%), Positives = 69/163 (41%), Gaps = 30/163 (18%)
Frame = +1
Query: 108 GGCYNCGDTGHLARDCH---------RSNNNGGGGG--------GAACYNCGDAGHLARD 150
G C+ CG GH AR+C R NN G AC NC GHLARD
Sbjct: 589 GICHTCGKAGHRARECTVPQKPPGDLRLCNNCYKQGHIAVECTNEKACNNCRKTGHLARD 768
Query: 151 CNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGG-------------ACYTC 197
C C C +GH+AR C +SN G GGGG C +C
Sbjct: 769 CPND--------PICNLCNISGHVARQCPKSNVIGDRGGGGSLRGGYRDGGFRDVVCRSC 924
Query: 198 GGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAK 240
FGH++RDCM GGP C CGG GH A +C + +
Sbjct: 925 QQFGHMSRDCM-------GGP-LMICQNCGGRGHQAYECPSGR 1029
Score = 85.9 bits (211), Expect = 2e-17
Identities = 63/231 (27%), Positives = 86/231 (36%), Gaps = 30/231 (12%)
Frame = +1
Query: 97 RRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRSNN 156
RR+ G C NC GH R+C A C+NC GH+A +C+ +
Sbjct: 385 RRDSRRGFSQDNLCKNCKRPGHYVRECPNV---------AVCHNCSLPGHIASECSTKSL 537
Query: 157 NSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGG 216
C+NC + GH+A C G C+TCG GH AR+C G
Sbjct: 538 --------CWNCKEPGHMASSCPNE----------GICHTCGKAGHRARECTVPQKPPGD 663
Query: 217 GPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGCFRCGEVGHLARDCD---------- 266
C C GH+A +C K C C + GHLARDC
Sbjct: 664 ---LRLCNNCYKQGHIAVECTNEKA----------CNNCRKTGHLARDCPNDPICNLCNI 804
Query: 267 ------------------GGVAVSGGGGNAGRN--TCFNCGKPGHFARECI 297
GG ++ GG + G C +C + GH +R+C+
Sbjct: 805 SGHVARQCPKSNVIGDRGGGGSLRGGYRDGGFRDVVCRSCQQFGHMSRDCM 957
Score = 75.9 bits (185), Expect = 2e-14
Identities = 48/173 (27%), Positives = 65/173 (36%)
Frame = +1
Query: 124 HRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNN 183
+R ++ G C NC GH R+C A C+NC GH+A +C+ +
Sbjct: 382 YRRDSRRGFSQDNLCKNCKRPGHYVRECPNV--------AVCHNCSLPGHIASECSTKS- 534
Query: 184 SGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPS 243
C+ C GH+A C P C CG GH AR+C + P
Sbjct: 535 ---------LCWNCKEPGHMASSC----------PNEGICHTCGKAGHRARECTVPQKPP 657
Query: 244 SGGVGGGGCFRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGHFAREC 296
C C + GH+A +C C NC K GH AR+C
Sbjct: 658 G---DLRLCNNCYKQGHIAVEC------------TNEKACNNCRKTGHLARDC 771
Score = 42.4 bits (98), Expect = 2e-04
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 95 GERRNGGG--GGGGGGG-----CYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHL 147
G+R GG GG GG C +C GH++RDC GG C NCG GH
Sbjct: 847 GDRGGGGSLRGGYRDGGFRDVVCRSCQQFGHMSRDCM-------GGPLMICQNCGGRGHQ 1005
Query: 148 ARDC 151
A +C
Sbjct: 1006AYEC 1017
>TC76707 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulated protein
CORA. [Alfalfa] {Medicago sativa}, partial (87%)
Length = 780
Score = 79.0 bits (193), Expect = 2e-15
Identities = 69/197 (35%), Positives = 83/197 (42%), Gaps = 5/197 (2%)
Frame = +1
Query: 88 GFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHL 147
G GG+ GG +GGGG GGG YN G G+ NNGGGG YN G G+
Sbjct: 184 GGGGYNGGGYNHGGGGYNNGGGGYNHGGGGY---------NNGGGG-----YNHGGGGY- 318
Query: 148 ARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDC 207
N N GGGG YN G G+ N+ GGG GGG GG G+
Sbjct: 319 ----NGGGYNHGGGG---YNHGGGGY--------NHGGGGYNGGGGHGGHGGGGY----- 438
Query: 208 MRGGNGGGGGPGSAS--CFRCGGIGHMARDCATAKGPSSGGVG---GGGCFRCGEVGHLA 262
G GG GG G+A + + D G + GG GGG + G G+
Sbjct: 439 --NGGGGHGGHGAAESVAVQTEEKTNEVNDAKYGGGYNHGGGSYNHGGGSYHHGGGGY-- 606
Query: 263 RDCDGGVAVSGGGGNAG 279
GG GGGG+ G
Sbjct: 607 NHGGGGHGGHGGGGHGG 657
Score = 40.4 bits (93), Expect = 8e-04
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +1
Query: 179 NRSNNSGGGGGGGGACYTCGGFGHLARDCMRGG----NGGGGGPGSASCFRCGGIGHMAR 234
N N++ GG GGG Y GG G+ GG NGGGG + GG G+
Sbjct: 133 NEVNDAKYGGYGGG--YNHGGGGYNGGGYNHGGGGYNNGGGGYNHGGGGYNNGGGGYN-- 300
Query: 235 DCATAKGPSSGGVG-GGGCFRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGH 291
G + GG GGG + G G+ GG +GGGG+ G G GH
Sbjct: 301 --HGGGGYNGGGYNHGGGGYNHGGGGY----NHGGGGYNGGGGHGGHGGGGYNGGGGH 456
>TC89725 similar to PIR|T05494|T05494 glycine-rich protein T19K4.150 -
Arabidopsis thaliana, partial (17%)
Length = 378
Score = 78.6 bits (192), Expect = 3e-15
Identities = 40/82 (48%), Positives = 43/82 (51%)
Frame = +1
Query: 189 GGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVG 248
G GG CY CG GH+AR+C GG GGGG R GG G G GG G
Sbjct: 1 GVGGGCYNCGESGHMARECTSGGGGGGG--------RYGGGG----------GGGGGGGG 126
Query: 249 GGGCFRCGEVGHLARDCDGGVA 270
GG C+ CGE GH ARDC G A
Sbjct: 127 GGSCYSCGESGHFARDCPTGSA 192
Score = 76.3 bits (186), Expect = 1e-14
Identities = 32/62 (51%), Positives = 38/62 (60%), Gaps = 11/62 (17%)
Frame = +1
Query: 160 GGGAGCYNCGDTGHLARDCNR-----------SNNSGGGGGGGGACYTCGGFGHLARDCM 208
G G GCYNCG++GH+AR+C GGGGGGGG+CY+CG GH ARDC
Sbjct: 1 GVGGGCYNCGESGHMARECTSGGGGGGGRYGGGGGGGGGGGGGGSCYSCGESGHFARDCP 180
Query: 209 RG 210
G
Sbjct: 181 TG 186
Score = 74.3 bits (181), Expect = 5e-14
Identities = 30/59 (50%), Positives = 38/59 (63%), Gaps = 12/59 (20%)
Frame = +1
Query: 105 GGGGGCYNCGDTGHLARDCHR------------SNNNGGGGGGAACYNCGDAGHLARDC 151
G GGGCYNCG++GH+AR+C GGGGGG +CY+CG++GH ARDC
Sbjct: 1 GVGGGCYNCGESGHMARECTSGGGGGGGRYGGGGGGGGGGGGGGSCYSCGESGHFARDC 177
Score = 66.2 bits (160), Expect = 1e-11
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 9/57 (15%)
Frame = +1
Query: 249 GGGCFRCGEVGHLARDCDGGVAVSGG---------GGNAGRNTCFNCGKPGHFAREC 296
GGGC+ CGE GH+AR+C G GG GG G +C++CG+ GHFAR+C
Sbjct: 7 GGGCYNCGESGHMARECTSGGGGGGGRYGGGGGGGGGGGGGGSCYSCGESGHFARDC 177
Score = 65.1 bits (157), Expect = 3e-11
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 13/59 (22%)
Frame = +1
Query: 133 GGGAACYNCGDAGHLARDCNR-------------SNNNSGGGGAGCYNCGDTGHLARDC 178
G G CYNCG++GH+AR+C GGGG CY+CG++GH ARDC
Sbjct: 1 GVGGGCYNCGESGHMARECTSGGGGGGGRYGGGGGGGGGGGGGGSCYSCGESGHFARDC 177
Score = 59.7 bits (143), Expect = 1e-09
Identities = 25/43 (58%), Positives = 31/43 (71%)
Frame = +1
Query: 81 RKDSAPRGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDC 123
R+ ++ G GG R G GGGGGGGGG CY+CG++GH ARDC
Sbjct: 49 RECTSGGGGGGGRYGGGGGGGGGGGGGGSCYSCGESGHFARDC 177
Score = 33.9 bits (76), Expect = 0.079
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 274 GGGNAGRNTCFNCGKPGHFARECIEASG 301
GGG C+NCG+ GH AREC G
Sbjct: 7 GGG------CYNCGESGHMARECTSGGG 72
>BQ151059 similar to GP|7291525|gb|A CG9888-PA {Drosophila melanogaster},
partial (26%)
Length = 308
Score = 68.9 bits (167), Expect = 2e-12
Identities = 52/132 (39%), Positives = 52/132 (39%)
Frame = +1
Query: 86 PRGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAG 145
PRG GG GG GGGGGGGGGG G G GGGGGG G G
Sbjct: 31 PRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGG 177
Query: 146 HLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLAR 205
GGGG G G G GGGGGGGG GG G
Sbjct: 178 --------GGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGG-----GGGG---- 282
Query: 206 DCMRGGNGGGGG 217
GG GGGGG
Sbjct: 283 ----GGGGGGGG 306
Score = 67.0 bits (162), Expect = 8e-12
Identities = 52/138 (37%), Positives = 54/138 (38%)
Frame = +1
Query: 82 KDSAPRGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNC 141
+D+ P G RGG GGGGGGGGGG G G GGGGGG
Sbjct: 1 QDNYPPFRGKPRGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGG 144
Query: 142 GDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFG 201
G G GGGG G G G GGGGGGGG GG G
Sbjct: 145 GGGG--------GGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGG 276
Query: 202 HLARDCMRGGNGGGGGPG 219
GG GGGGG G
Sbjct: 277 --------GGGGGGGGGG 306
Score = 64.7 bits (156), Expect = 4e-11
Identities = 57/166 (34%), Positives = 57/166 (34%)
Frame = +3
Query: 86 PRGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAG 145
P G GG GG GGGGGGGGGG G G GGGGGG G G
Sbjct: 33 PGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGG 176
Query: 146 HLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLAR 205
GGGG G GGGGGGGG GG G
Sbjct: 177 -------------GGGGGG----------------GGGGGGGGGGGGG----GGGG---- 245
Query: 206 DCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGG 251
GG GGGGG G G GG GGGG
Sbjct: 246 ----GGGGGGGGGG---------------------GGGGGGGGGGG 308
Score = 58.9 bits (141), Expect = 2e-09
Identities = 56/185 (30%), Positives = 57/185 (30%)
Frame = +1
Query: 95 GERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRS 154
G+ R GGGGGGGGGG GGGGGG
Sbjct: 25 GKPRGGGGGGGGGGG--------------------GGGGGG------------------- 87
Query: 155 NNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGG 214
GGGG G GGGGGGGG GG GG
Sbjct: 88 ----GGGGGG--------------------GGGGGGGG-----------------GGGGG 144
Query: 215 GGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGCFRCGEVGHLARDCDGGVAVSGG 274
GGG G GG G G GG GGGG GG GG
Sbjct: 145 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGG 279
Query: 275 GGNAG 279
GG G
Sbjct: 280 GGGGG 294
>TC76706 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulated protein
CORA. [Alfalfa] {Medicago sativa}, partial (94%)
Length = 1034
Score = 66.6 bits (161), Expect = 1e-11
Identities = 53/146 (36%), Positives = 62/146 (42%), Gaps = 16/146 (10%)
Frame = +1
Query: 90 GGWR-GGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYN--CGDAGH 146
GG+ GG NGGGG GGG YN G G+ H + GGGG YN G GH
Sbjct: 235 GGYNHGGGYHNGGGGYHNGGGGYNHGGGGYNGGGGHGGHGGYNGGGGHGGYNGGGGHGGH 414
Query: 147 LARD---------CNRSNNNSGGGGA----GCYNCGDTGHLARDCNRSNNSGGGGGGGGA 193
A + N N+ GGG+ G YN G + N+ GG GG
Sbjct: 415 GAAESVAVQTEEKTNEVNDAKYGGGSYNHGGSYNHGGGSY--------NHGGGSYHHGGG 570
Query: 194 CYTCGGFGHLARDCMRGGNGGGGGPG 219
Y GG GH GG+GGGG G
Sbjct: 571 GYNHGGGGH-------GGHGGGGHGG 627
Score = 54.7 bits (130), Expect = 4e-08
Identities = 58/173 (33%), Positives = 65/173 (37%), Gaps = 10/173 (5%)
Frame = +1
Query: 89 FGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGG--GGAACYNCGDAGH 146
+GG+ G +GGG G GG YN G H NGGGG G YN G G+
Sbjct: 184 YGGYNHGGYNHGGGYNG--GG-YNHGGGYH----------NGGGGYHNGGGGYNHGGGGY 324
Query: 147 LARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCG----GFGH 202
N G GG G YN G GH N GGG GG GA + +
Sbjct: 325 --------NGGGGHGGHGGYN-GGGGH------GGYNGGGGHGGHGAAESVAVQTEEKTN 459
Query: 203 LARDCMRGG----NGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGG 251
D GG +GG G S GG H G GG GGGG
Sbjct: 460 EVNDAKYGGGSYNHGGSYNHGGGSYNHGGGSYHHGGGGYNHGGGGHGGHGGGG 618
>TC87868 similar to PIR|T05112|T05112 splicing factor 9G8-like SR protein
RSZp22 [validated] - Arabidopsis thaliana, partial (91%)
Length = 860
Score = 65.9 bits (159), Expect = 2e-11
Identities = 37/83 (44%), Positives = 41/83 (48%), Gaps = 6/83 (7%)
Frame = +3
Query: 88 GFGGWR---GGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAA---CYNC 141
G GWR R+GGGGGGGGGG GGGGGG + CY C
Sbjct: 219 GKNGWRVELSHNSRSGGGGGGGGGG-----------------RGRGGGGGGGSDLKCYEC 347
Query: 142 GDAGHLARDCNRSNNNSGGGGAG 164
G+ GH AR+C N GGGGAG
Sbjct: 348 GEPGHFAREC----RNRGGGGAG 404
Score = 65.9 bits (159), Expect = 2e-11
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +3
Query: 68 DVTGPNGAALQPTRKDSAPRGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSN 127
D+ G NG ++ + + G GG GG R GGGGGG CY CG+ GH AR+C
Sbjct: 210 DLDGKNGWRVELSHNSRSGGGGGGGGGGRGRGGGGGGGSDLKCYECGEPGHFAREC---R 380
Query: 128 NNGGGGGG 135
N GGGG G
Sbjct: 381 NRGGGGAG 404
Score = 55.1 bits (131), Expect = 3e-08
Identities = 28/69 (40%), Positives = 35/69 (50%)
Frame = +3
Query: 177 DCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDC 236
+ + ++ SGGGGGGGG GG RG GGGGG C+ CG GH AR+C
Sbjct: 240 ELSHNSRSGGGGGGGG-----GG---------RGRGGGGGGGSDLKCYECGEPGHFAREC 377
Query: 237 ATAKGPSSG 245
G +G
Sbjct: 378 RNRGGGGAG 404
Score = 54.3 bits (129), Expect = 6e-08
Identities = 30/79 (37%), Positives = 34/79 (42%), Gaps = 2/79 (2%)
Frame = +3
Query: 114 GDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAG--CYNCGDT 171
G G H S + GGGGGG R GGGG+ CY CG+
Sbjct: 219 GKNGWRVELSHNSRSGGGGGGGGG--------------GRGRGGGGGGGSDLKCYECGEP 356
Query: 172 GHLARDCNRSNNSGGGGGG 190
GH AR+C N GGGG G
Sbjct: 357 GHFARECR---NRGGGGAG 404
Score = 53.1 bits (126), Expect = 1e-07
Identities = 30/68 (44%), Positives = 32/68 (46%)
Frame = +3
Query: 155 NNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGG 214
N+ SGGGG G G G R GGGGG CY CG GH AR+C G GG
Sbjct: 252 NSRSGGGGGG----GGGG-------RGRGGGGGGGSDLKCYECGEPGHFARECRNRGGGG 398
Query: 215 GGGPGSAS 222
G S S
Sbjct: 399 AGRRRSRS 422
Score = 48.9 bits (115), Expect = 2e-06
Identities = 25/58 (43%), Positives = 27/58 (46%)
Frame = +3
Query: 244 SGGVGGGGCFRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGHFARECIEASG 301
SGG GGGG GG GGGG C+ CG+PGHFAREC G
Sbjct: 261 SGGGGGGG--------------GGGRGRGGGGGGGSDLKCYECGEPGHFARECRNRGG 392
Score = 47.8 bits (112), Expect = 5e-06
Identities = 30/76 (39%), Positives = 33/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 209 RGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGG----CFRCGEVGHLARD 264
R G GGGGG G G GG GGGG C+ CGE GH AR+
Sbjct: 258 RSGGGGGGGGG---------------------GRGRGGGGGGGSDLKCYECGEPGHFARE 374
Query: 265 CDGGVAVSGGGGNAGR 280
C + GGG AGR
Sbjct: 375 CR-----NRGGGGAGR 407
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 63.9 bits (154), Expect = 7e-11
Identities = 72/224 (32%), Positives = 83/224 (36%), Gaps = 18/224 (8%)
Frame = +3
Query: 87 RGFGGWR-GGERRNGG----GGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNC 141
RG GGWR GGE G GGGGGGG C G G + GGGGGG
Sbjct: 48 RGAGGWRRGGEVGGSGWCVWGGGGGGGRCGGGGGGGGGRGGAEAAGPGGGGGGG------ 209
Query: 142 GDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFG 201
GDA L R + +GGGG RS GG GG G A G +
Sbjct: 210 GDA--LGRRRLAKGSGAGGGGGA---------------RSRGGGGPGGWGRAGQGTGLWT 338
Query: 202 HLAR-------------DCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVG 248
+ R D + GG GG G A GG AR A A G GG
Sbjct: 339 PVCRPWGVS*PWPGHHGDALTGGARVAGGVGGA-----GGPEGGAR--AGAAGGGRGGGR 497
Query: 249 GGGCFRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGHF 292
G G +R G D GG +G ++ G P +F
Sbjct: 498 GLGLWRGSGGGRGRGDWRGGARWAGVCSDSDERDERRAGLPTNF 629
Score = 60.5 bits (145), Expect = 8e-10
Identities = 71/221 (32%), Positives = 80/221 (36%), Gaps = 33/221 (14%)
Frame = +1
Query: 88 GFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHL 147
G G GG RR GGG GG + G L R G G G A G G
Sbjct: 148 GGAGAEGGRRRRARGGGAVAGGMPSAA--GGLLRGVGPGAGGGPGPGAAG----GRVGGG 309
Query: 148 ARDCNRSNN----------NSGGG-------GAGCYNCGDTGHLARDCNRSNNSGGGGGG 190
R R + + G G GA + G R R GGGGG
Sbjct: 310 GRGRGRGSGPRCAALGEFPDLGPGTTATP*RGARGWPAGSGALGGRRGARGRAPRGGGGG 489
Query: 191 GGACYTCGGFGHLARDCMRGGNGGGGGPGS----ASCFRCGGIGH------MARDCATAK 240
GGA CGG L D GG GGGG G A+ R G +AR +
Sbjct: 490 GGAASDCGGA--LGGD--GGGGTGGGGRGGRGYVATRTRGTSAGRGCPPIFLARGTRSHS 657
Query: 241 GPSSGGVGGG------GCFRCGEVGHLARDCDGGVAVSGGG 275
G GG GGG GC R G A+ GGVA+ G G
Sbjct: 658 GGGGGGRGGGRRGVAAGCARGMLCGARAQGAPGGVALGGAG 780
Score = 59.7 bits (143), Expect = 1e-09
Identities = 65/204 (31%), Positives = 68/204 (32%), Gaps = 13/204 (6%)
Frame = +1
Query: 90 GGWRGGERRNGGGG---------GGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYN 140
GG RGG GGGG GG G G G G A GGG A
Sbjct: 37 GGGRGGRGAGGGGGRWGAQAGACGGVGAGGAAAGGVGGGAGAEGGRRRRARGGGAVAGGM 216
Query: 141 CGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGF 200
AG L R G GA G G G G G G C G F
Sbjct: 217 PSAAGGLLRGVGPGAGGGPGPGAAGGRVGGGGR-----------GRGRGSGPRCAALGEF 363
Query: 201 GHLARDCM----RGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGCFRCG 256
L RG G G G+ GG R A + P GG GGG CG
Sbjct: 364 PDLGPGTTATP*RGARGWPAGSGA-----LGG-----RRGARGRAPRGGGGGGGAASDCG 513
Query: 257 EVGHLARDCDGGVAVSGGGGNAGR 280
G L D GG +GGGG GR
Sbjct: 514 --GALGGDGGGG---TGGGGRGGR 570
Score = 56.6 bits (135), Expect = 1e-08
Identities = 72/227 (31%), Positives = 77/227 (33%), Gaps = 18/227 (7%)
Frame = +2
Query: 71 GPNGAALQPTRKDSAPRGF---GGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSN 127
G G L+ R RG GGW GG GGGGGG GGG G C
Sbjct: 71 GGGGGGLRLVRVGGWGRGGPLRGGWGGGRGPRGGGGGGPGGGGRWRGGCPRPQAAC*GEW 250
Query: 128 NNGGGGG------GAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRS 181
G GGG GA G AG A D G G LAR R
Sbjct: 251 GRGRGGGPVQGRRGAGWVGEGGAGDGALD------------PGVPPLGSFLTLARAPRRR 394
Query: 182 NNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKG 241
+ G GG G G G RGG GGG GG G A G
Sbjct: 395 PDGGRAGGRRGRGRWGAGGGRAGG--RRGGGAGGGARPRIVEGLWGGTG--------AGG 544
Query: 242 PSSGGVGGGGCFRCGEVG-------HLARDCDGGVAVSGG--GGNAG 279
+ GG GGG R G G H +G V + GG GG G
Sbjct: 545 LAGGGEVGGGM*RLGREGRAPGGAAHQFSWQEGRVPIPGGEEGGGGG 685
Score = 47.8 bits (112), Expect = 5e-06
Identities = 53/174 (30%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Frame = +3
Query: 88 GFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYN-CGDAGH 146
G GG GG R GGG GGG L R G GGA C D+
Sbjct: 432 GAGGPEGGARAGAAGGGRGGGRGLG------LWRGSGGGRGRGDWRGGARWAGVCSDSDE 593
Query: 147 LARDCNRSN------------------NNSGGGGAGCYNCGDTGHLARDCNRSNNSG-GG 187
RD R+ +GGG G G G ARD R + +G
Sbjct: 594 --RDERRAGLPTNFLGKRDAFPFRGGRRGAGGGEEG----GGGGVRARDAVRRSRAGCAW 755
Query: 188 GGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKG 241
GGG G C G AR G G GGPG +C +G + A A+G
Sbjct: 756 GGGAGRCGEGGRRAQHARARSSGVEAGSGGPG-----KCSNVGARSISRA*ARG 902
Score = 46.6 bits (109), Expect = 1e-05
Identities = 36/95 (37%), Positives = 40/95 (41%)
Frame = +3
Query: 185 GGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSS 244
GGG G G G G + C+ GG GGGG G GG G R A A GP
Sbjct: 36 GGGARGAGGWRRGGEVGG-SGWCVWGGGGGGGRCGG------GGGGGGGRGGAEAAGPGG 194
Query: 245 GGVGGGGCFRCGEVGHLARDCDGGVAVSGGGGNAG 279
GG GGG + + GG A S GGG G
Sbjct: 195 GGGGGGDALGRRRLAKGSGAGGGGGARSRGGGGPG 299
Score = 45.1 bits (105), Expect = 3e-05
Identities = 46/151 (30%), Positives = 52/151 (33%), Gaps = 23/151 (15%)
Frame = +3
Query: 71 GPNGAALQPTRKDSAPRGFGGWRGGERRNGGGGGGGGGGCYN-------CGDTGHL---- 119
GP G A R +A G GG RG G GGG G G C D+
Sbjct: 441 GPEGGA----RAGAAGGGRGGGRGLGLWRGSGGGRGRGDWRGGARWAGVCSDSDERDERR 608
Query: 120 ---------ARDCH--RSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNC 168
RD R G GGG G G ARD R + G G C
Sbjct: 609 AGLPTNFLGKRDAFPFRGGRRGAGGGEEG----GGGGVRARDAVRRSRAGCAWGGGAGRC 776
Query: 169 GDTGHLARDCN-RSNNSGGGGGGGGACYTCG 198
G+ G A+ RS+ G GG G C G
Sbjct: 777 GEGGRRAQHARARSSGVEAGSGGPGKCSNVG 869
Score = 35.4 bits (80), Expect = 0.027
Identities = 33/106 (31%), Positives = 39/106 (36%)
Frame = +2
Query: 87 RGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGH 146
RG G W G R GG GGG GG G + GG GG G
Sbjct: 422 RGRGRWGAGGGRAGGRRGGGAGG----GARPRIVEGLWGGTGAGGLAGGGEVG--GGM*R 583
Query: 147 LARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGG 192
L R+ + GG A ++ + R GGGGGGGG
Sbjct: 584 LGRE-----GRAPGGAAHQFSWQE----GRVPIPGGEEGGGGGGGG 694
Score = 27.7 bits (60), Expect = 5.6
Identities = 32/117 (27%), Positives = 34/117 (28%), Gaps = 21/117 (17%)
Frame = +2
Query: 94 GGERRNGGGGGGG--GGGCYNC-------------------GDTGHLARDCHRSNNNGGG 132
GGE GGGGGGG G C G T AR GG
Sbjct: 659 GGEEGGGGGGGGGWRRGAREGCCAALARRVRLGGWRWAVRGGRTARAARARTIERRRGGI 838
Query: 133 GGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGG 189
G A LAR R+ GD G A C R + G G
Sbjct: 839 WGAGEVLERRRAVDLARVSARNKRVPRRQSRAGRGAGDDGADAGRCGRGERALRGSG 1009
>BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10.5 [imported]
- Arabidopsis thaliana, partial (5%)
Length = 627
Score = 60.1 bits (144), Expect = 1e-09
Identities = 39/124 (31%), Positives = 47/124 (37%), Gaps = 5/124 (4%)
Frame = -1
Query: 138 CYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTC 197
C NCG + H + C N G Y N G GG G CY C
Sbjct: 627 CSNCGGSDHSSAQCLHLRNPPEQTAGGAY--------------VNTVSGSGGASGKCYKC 490
Query: 198 GGFGHLARDC--MRGGN--GGGGGPGSASCFRCGGIGHMARDCAT-AKGPSSGGVGGGGC 252
GH A +C M N GG G S +C++C GH A +C + P S G G
Sbjct: 489 QQPGHWASNCPSMSAANRVSGGSGGASGNCYKCNQPGHWANNCPNMSAAPQSHGNSNTGQ 310
Query: 253 FRCG 256
R G
Sbjct: 309 GRYG 298
Score = 59.3 bits (142), Expect = 2e-09
Identities = 29/89 (32%), Positives = 35/89 (38%), Gaps = 20/89 (22%)
Frame = -1
Query: 110 CYNCGDTGHLARDCHRSNN--------------NGGGGGGAACYNCGDAGHLARDC---- 151
C NCG + H + C N +G GG CY C GH A +C
Sbjct: 627 CSNCGGSDHSSAQCLHLRNPPEQTAGGAYVNTVSGSGGASGKCYKCQQPGHWASNCPSMS 448
Query: 152 --NRSNNNSGGGGAGCYNCGDTGHLARDC 178
NR + SGG CY C GH A +C
Sbjct: 447 AANRVSGGSGGASGNCYKCNQPGHWANNC 361
Score = 59.3 bits (142), Expect = 2e-09
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Frame = -1
Query: 223 CFRCGGIGHMARDCATAKGPSSGGVGG-------------GGCFRCGEVGHLARDCDGGV 269
C CGG H + C + P GG G C++C + GH A +C
Sbjct: 627 CSNCGGSDHSSAQCLHLRNPPEQTAGGAYVNTVSGSGGASGKCYKCQQPGHWASNCPSMS 448
Query: 270 A---VSGGGGNAGRNTCFNCGKPGHFAREC 296
A VSGG G A N C+ C +PGH+A C
Sbjct: 447 AANRVSGGSGGASGN-CYKCNQPGHWANNC 361
Score = 56.6 bits (135), Expect = 1e-08
Identities = 33/102 (32%), Positives = 45/102 (43%), Gaps = 17/102 (16%)
Frame = -1
Query: 194 CYTCGGFGHLARDCMRGGN------GG-------GGGPGSASCFRCGGIGHMARDCATAK 240
C CGG H + C+ N GG G G S C++C GH A +C +
Sbjct: 627 CSNCGGSDHSSAQCLHLRNPPEQTAGGAYVNTVSGSGGASGKCYKCQQPGHWASNCPSMS 448
Query: 241 GPS--SGGVGG--GGCFRCGEVGHLARDCDGGVAVSGGGGNA 278
+ SGG GG G C++C + GH A +C A GN+
Sbjct: 447 AANRVSGGSGGASGNCYKCNQPGHWANNCPNMSAAPQSHGNS 322
Score = 55.1 bits (131), Expect = 3e-08
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Frame = -1
Query: 102 GGGGGGGGCYNCGDTGHLARDC---HRSNNNGGGGGGAA--CYNCGDAGHLARDC----- 151
G GG G CY C GH A +C +N GG GGA+ CY C GH A +C
Sbjct: 525 GSGGASGKCYKCQQPGHWASNCPSMSAANRVSGGSGGASGNCYKCNQPGHWANNCPNMSA 346
Query: 152 ---NRSNNNSGGGGAG 164
+ N+N+G G G
Sbjct: 345 APQSHGNSNTGQGRYG 298
Score = 39.3 bits (90), Expect = 0.002
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Frame = -1
Query: 98 RNGGGGGGGGGGCYNCGDTGHLARDC---------HRSNNNGGGGGGAA 137
R GG GG G CY C GH A +C H ++N G G G A
Sbjct: 438 RVSGGSGGASGNCYKCNQPGHWANNCPNMSAAPQSHGNSNTGQGRYGIA 292
>AJ388976 similar to PIR|E84638|E84 probable RSZp22 splicing factor
[imported] - Arabidopsis thaliana, partial (62%)
Length = 508
Score = 59.7 bits (143), Expect = 1e-09
Identities = 32/75 (42%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 88 GFGGWR---GGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDA 144
G GWR + GGGGGG GGG G G +GGGG CY CG+
Sbjct: 215 GKNGWRVELSHNSKTGGGGGGRGGGGGGGGGRGR----------SGGGGSDLKCYXCGEP 364
Query: 145 GHLARDCNRSNNNSG 159
GH AR CN S SG
Sbjct: 365 GHFARXCNSSPGGSG 409
Score = 52.4 bits (124), Expect = 2e-07
Identities = 31/82 (37%), Positives = 41/82 (49%), Gaps = 8/82 (9%)
Frame = +2
Query: 61 NDKTKAVD----VTGPNGAALQPTRKDSAPRGFGGWRGGERRNGGGGGGGGGG----CYN 112
+D+ A+D + G NG ++ + G GG GG GG G GGGG CY
Sbjct: 173 DDRRDALDAIRELDGKNGWRVELSHNSKTGGGGGGRGGGGGGGGGRGRSGGGGSDLKCYX 352
Query: 113 CGDTGHLARDCHRSNNNGGGGG 134
CG+ GH AR C N++ GG G
Sbjct: 353 CGEPGHFARXC---NSSPGGSG 409
Score = 51.2 bits (121), Expect = 5e-07
Identities = 40/121 (33%), Positives = 44/121 (36%)
Frame = +2
Query: 181 SNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAK 240
S+NS GGGGGG RGG GGGGG +
Sbjct: 242 SHNSKTGGGGGG----------------RGGGGGGGG---------------------GR 310
Query: 241 GPSSGGVGGGGCFRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGHFARECIEAS 300
G S GG C+ CGE GH AR C+ S GG RN P F R I
Sbjct: 311 GRSGGGGSDLKCYXCGEPGHFARXCNS----SPGGSGXRRNP-----SPPQFXRNPITGK 463
Query: 301 G 301
G
Sbjct: 464 G 466
Score = 42.7 bits (99), Expect = 2e-04
Identities = 26/69 (37%), Positives = 29/69 (41%), Gaps = 8/69 (11%)
Frame = +2
Query: 155 NNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGG-----GGGA---CYTCGGFGHLARD 206
N+ +GGGG G R GGGGG GGG+ CY CG GH AR
Sbjct: 248 NSKTGGGGGG---------------RGGGGGGGGGRGRSGGGGSDLKCYXCGEPGHFARX 382
Query: 207 CMRGGNGGG 215
C G G
Sbjct: 383 CNSSPGGSG 409
>TC76705 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulated protein
CORA. [Alfalfa] {Medicago sativa}, partial (80%)
Length = 854
Score = 59.3 bits (142), Expect = 2e-09
Identities = 53/147 (36%), Positives = 60/147 (40%), Gaps = 16/147 (10%)
Frame = +2
Query: 90 GGWRGGERRNGGG---GGG--GGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDA 144
GG+ GG +GGG GGG GGG Y+ G G+ N GGG GG YN G
Sbjct: 230 GGYNGGGYNHGGGYHNGGGYHNGGGGYHNGGGGY---------NGGGGHGGHGGYNRG-G 379
Query: 145 GHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGG--GGGGACYTC----- 197
GH GG GA T + N + N GGGG GGA Y
Sbjct: 380 GH------------GGRGAAESVAVQTEEKTNEVNDARNGGGGGSFNKGGASYNHGRGSY 523
Query: 198 ----GGFGHLARDCMRGGNGGGGGPGS 220
GG+ H GG GGGG GS
Sbjct: 524 HHG*GGYNH------GGGGHGGGGHGS 586
Score = 30.4 bits (67), Expect = 0.87
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +2
Query: 183 NSGGGGGGGGACYTCGGFGHLARDCMRGG--NGGGGGPGSASCFRCGGIGHMARDCATAK 240
N GG GGG Y GG+ H GG NGGGG + GG GH
Sbjct: 206 NHGGYNHGGG--YNGGGYNHGGGYHNGGGYHNGGGGYHNGGGGYNGGG-GHGGH------ 358
Query: 241 GPSSGGVGGGGCFRCGEVGHLARDCDGGV--AVSGGGGNA 278
G + G G GG V + V A +GGGG +
Sbjct: 359 GGYNRGGGHGGRGAAESVAVQTEEKTNEVNDARNGGGGGS 478
Score = 28.1 bits (61), Expect = 4.3
Identities = 22/67 (32%), Positives = 27/67 (39%), Gaps = 5/67 (7%)
Frame = +2
Query: 55 SIATGDNDKTKAVDVTGPNGAALQPTRKDSAP--RGFGGWR---GGERRNGGGGGGGGGG 109
S+A +KT V+ NG K A G G + GG GGG GGGG G
Sbjct: 407 SVAVQTEEKTNEVN-DARNGGGGGSFNKGGASYNHGRGSYHHG*GGYNHGGGGHGGGGHG 583
Query: 110 CYNCGDT 116
+ T
Sbjct: 584 SHGAEQT 604
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 58.5 bits (140), Expect = 3e-09
Identities = 57/188 (30%), Positives = 66/188 (34%), Gaps = 12/188 (6%)
Frame = -1
Query: 104 GGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGA 163
GGGGG Y TG + + GGGGG G G+ +GGGG
Sbjct: 585 GGGGGDAYEIPKTGGIGP------SYTGGGGGDEYTGGGGEGYAYTGDGGGEVYTGGGGE 424
Query: 164 GCYNCGDTGH------------LARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGG 211
G GD G A D ++ GGGGGGG GG G GG
Sbjct: 423 G*AYTGDGGGDGDGGG**GV*CGAGDDGGGGSTQGGGGGGGGSTQGGGDGGGGE*TGGGG 244
Query: 212 NGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGCFRCGEVGHLARDCDGGVAV 271
GGG G GG+G G GGGG GE+ G
Sbjct: 243 ECTGGGGGGDKYGYTGGVGE*GGGGGEXGGGGGE*AGGGG----GEL***GTGGGGENTG 76
Query: 272 SGGGGNAG 279
+GGGG G
Sbjct: 75 AGGGGGGG 52
Score = 58.2 bits (139), Expect = 4e-09
Identities = 61/208 (29%), Positives = 68/208 (32%), Gaps = 19/208 (9%)
Frame = -1
Query: 71 GPNGAALQPTRKDSAPRGFGGWRGGERRNGGGG---------------GGGGGGCYNCGD 115
G G A + + + G GG+ GGGG GGGG G GD
Sbjct: 582 GGGGDAYEIPKTGGIGPSYTGGGGGDEYTGGGGEGYAYTGDGGGEVYTGGGGEG*AYTGD 403
Query: 116 TGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLA 175
G + +GGG G C D G S GGGG G G G
Sbjct: 402 GG--------GDGDGGG**GV*CGAGDDGG------GGSTQGGGGGGGGSTQGGGDGGGG 265
Query: 176 RDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGG----GGGPGSASCFRCGGIGH 231
GGGGGG GG G G GG GGG G GG G
Sbjct: 264 E*TGGGGECTGGGGGGDKYGYTGGVGE*GGGGGEXGGGGGE*AGGGGGEL***GTGGGGE 85
Query: 232 MARDCATAKGPSSGGVGGGGCFRCGEVG 259
G GG GGG + G VG
Sbjct: 84 NTGAGGGGGGGEFGGGGGGDLTQYGGVG 1
Score = 49.3 bits (116), Expect = 2e-06
Identities = 46/148 (31%), Positives = 55/148 (37%), Gaps = 16/148 (10%)
Frame = -1
Query: 149 RDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGG----------------GGG 192
R ++ N GGGG Y TG + + +GGGGG GGG
Sbjct: 615 RRSSQKNQ*KGGGGGDAYEIPKTGGIG-----PSYTGGGGGDEYTGGGGEGYAYTGDGGG 451
Query: 193 ACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGC 252
YT GG A GG+G GGG C G G D GG GGGG
Sbjct: 450 EVYTGGGGEG*AYTGDGGGDGDGGG**GV*C----GAG----DDGGGGSTQGGGGGGGGS 295
Query: 253 FRCGEVGHLARDCDGGVAVSGGGGNAGR 280
+ G G GG +GGGG +
Sbjct: 294 TQGGGDGGGGE*TGGGGECTGGGGGGDK 211
>TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Arabidopsis
thaliana}, partial (71%)
Length = 974
Score = 57.4 bits (137), Expect = 7e-09
Identities = 34/103 (33%), Positives = 43/103 (41%)
Frame = +2
Query: 52 VEFSIATGDNDKTKAVDVTGPNGAALQPTRKDSAPRGFGGWRGGERRNGGGGGGGGGGCY 111
VEF +D +D +G+ L PRG R G G G G C+
Sbjct: 185 VEFRDPRDADDARYNLDGRDIDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGSGRCF 364
Query: 112 NCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRS 154
NCG GH ARDC G CY CG+ GH+ ++C S
Sbjct: 365 NCGIDGHWARDCK------AGDWKNKCYRCGERGHIEKNCKNS 475
Score = 51.6 bits (122), Expect = 4e-07
Identities = 24/53 (45%), Positives = 28/53 (52%)
Frame = +2
Query: 213 GGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGCFRCGEVGHLARDC 265
G G PGS CF CG GH ARDC G C+RCGE GH+ ++C
Sbjct: 329 GRGPPPGSGRCFNCGIDGHWARDC-------KAGDWKNKCYRCGERGHIEKNC 466
Score = 50.8 bits (120), Expect = 6e-07
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +2
Query: 120 ARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCN 179
+RD G G C+NCG GH ARDC +G CY CG+ GH+ ++C
Sbjct: 305 SRDSREYLGRGPPPGSGRCFNCGIDGHWARDCK-----AGDWKNKCYRCGERGHIEKNCK 469
Query: 180 RS 181
S
Sbjct: 470 NS 475
Score = 46.2 bits (108), Expect = 2e-05
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 248 GGGGCFRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGHFAREC 296
G G CF CG GH ARDC G +N C+ CG+ GH + C
Sbjct: 347 GSGRCFNCGIDGHWARDCKAG---------DWKNKCYRCGERGHIEKNC 466
Score = 45.1 bits (105), Expect = 3e-05
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2
Query: 148 ARDCNRSNNNSGGG---GAG-CYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHL 203
+RD S G G G+G C+NCG GH ARDC G CY CG GH+
Sbjct: 296 SRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDCK-------AGDWKNKCYRCGERGHI 454
Query: 204 ARDC 207
++C
Sbjct: 455 EKNC 466
Score = 44.7 bits (104), Expect = 4e-05
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 175 ARDCNRSNNSGGGGG--GGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHM 232
+RD S G G G G C+ CG GH ARDC G C+RCG GH+
Sbjct: 296 SRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDCK-------AGDWKNKCYRCGERGHI 454
Query: 233 ARDC 236
++C
Sbjct: 455 EKNC 466
Score = 34.3 bits (77), Expect = 0.060
Identities = 15/35 (42%), Positives = 18/35 (50%)
Frame = +2
Query: 262 ARDCDGGVAVSGGGGNAGRNTCFNCGKPGHFAREC 296
+RD G G G CFNCG GH+AR+C
Sbjct: 296 SRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDC 400
>TC87201 similar to PIR|F86388|F86388 hypothetical protein AAG29221.1
[imported] - Arabidopsis thaliana, partial (41%)
Length = 991
Score = 57.4 bits (137), Expect = 7e-09
Identities = 62/184 (33%), Positives = 69/184 (36%), Gaps = 21/184 (11%)
Frame = -3
Query: 89 FGGWRGGERRNGGGGGGGGGGCYNC--GDTGHLARDCHRSNNN---GGGGGGAACYNCGD 143
+GG G GGG G GGGG G G L C ++ GGGGG Y G
Sbjct: 551 YGGGIGL**YGGGGDGEGGGGDS*T*GGGGGDL*TYCGGGGDS*TYGGGGGDL*TYG-GG 375
Query: 144 AGHLARDCNRSNNNSGGG-----GAGCYNCGDTGHLARDCNRSNNSGGG-----GGGGGA 193
G L + + GGG G G Y G G + GGG GGGGG
Sbjct: 374 GGDLYTYGGGGDGDGGGGDL*TYGGGVYTYGGGGGDL*IYGGGGDGGGGDG*T*GGGGGD 195
Query: 194 CYTCGGFGHLARDCMRGGNGGG------GGPGSASCFRCGGIGHMARDCATAKGPSSGGV 247
YT GG G GG+GGG GG C R GG GG
Sbjct: 194 LYTYGGGGGDL*IYGGGGDGGGGDG*T*GGARVVICIRIGG----------------GGD 63
Query: 248 GGGG 251
GGGG
Sbjct: 62 GGGG 51
Score = 38.9 bits (89), Expect = 0.002
Identities = 45/138 (32%), Positives = 54/138 (38%), Gaps = 17/138 (12%)
Frame = -3
Query: 159 GGGGAGCYNCGDT-------GHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGG 211
GGGG G GD+ G L C +S GGGGG T GG G GG
Sbjct: 521 GGGGDGEGGGGDS*T*GGGGGDL*TYCGGGGDS*TYGGGGGDL*TYGGGGGDLYTYGGGG 342
Query: 212 NGGGGGP-----GSASCFRCGGIGHM-----ARDCATAKGPSSGGVGGGGCFRCGEVGHL 261
+G GGG G GG G + D G + GG GGG + G G
Sbjct: 341 DGDGGGGDL*TYGGGVYTYGGGGGDL*IYGGGGDGGGGDG*T*GG-GGGDLYTYGGGG-- 171
Query: 262 ARDCDGGVAVSGGGGNAG 279
G + + GGGG+ G
Sbjct: 170 -----GDL*IYGGGGDGG 132
>TC82733 similar to GP|10177404|dbj|BAB10535.
gene_id:K24M7.12~pir||S42136~similar to unknown protein
{Arabidopsis thaliana}, partial (57%)
Length = 710
Score = 57.0 bits (136), Expect = 9e-09
Identities = 45/156 (28%), Positives = 60/156 (37%), Gaps = 24/156 (15%)
Frame = +3
Query: 67 VDVTGPNGAALQPTRK--DSAPRGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDC- 123
VD T PN + + K P R G+R G G C+ C H+A+ C
Sbjct: 147 VDPTPPNDPSKKKKNKFKRKKPDSNSKPRTGKRPLRVPGMKPGDSCFICKGLDHIAKFCT 326
Query: 124 ------------------HRSNNNGGGGGGAAC---YNCGDAGHLARDCNRSNNNSGGGG 162
HR+ N GG YNCGD GH +C G
Sbjct: 327 QKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFKY*YNCGDNGHSLANCPHPLQEGGTMF 506
Query: 163 AGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCG 198
A C+ C + GHL+++C + N+ G GG C CG
Sbjct: 507 AQCFVCKEQGHLSKNCPK--NAHGIYPKGGCCKICG 608
Score = 44.7 bits (104), Expect = 4e-05
Identities = 29/104 (27%), Positives = 41/104 (38%)
Frame = +3
Query: 162 GAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSA 221
G C+ C H+A+ C + C C GH A++C GG+
Sbjct: 273 GDSCFICKGLDHIAKFCTQKAE----WEKNKICLRCRRRGHRAQNCPDGGSK----EDFK 428
Query: 222 SCFRCGGIGHMARDCATAKGPSSGGVGGGGCFRCGEVGHLARDC 265
+ CG GH +C GG CF C E GHL+++C
Sbjct: 429 Y*YNCGDNGHSLANCPHPL--QEGGTMFAQCFVCKEQGHLSKNC 554
Score = 43.9 bits (102), Expect = 8e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 191 GGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGG 250
G +C+ C G H+A+ C + + C RC GH A++C P G
Sbjct: 273 GDSCFICKGLDHIAKFCTQKAEW----EKNKICLRCRRRGHRAQNC-----PDGGSKEDF 425
Query: 251 GC-FRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGHFAREC 296
+ CG+ GH +C + GG A CF C + GH ++ C
Sbjct: 426 KY*YNCGDNGHSLANCPHPLQ-EGGTMFA---QCFVCKEQGHLSKNC 554
>TC76704 homologue to SP|Q09134|GRPA_MEDFA Abscisic acid and environmental
stress inducible protein. [Sickle medic] {Medicago
falcata}, partial (81%)
Length = 771
Score = 57.0 bits (136), Expect = 9e-09
Identities = 46/117 (39%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Frame = +2
Query: 90 GGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLAR 149
GG+ GG +GGG GGG YN G G+ NNGGG YN G G+
Sbjct: 194 GGYNGGGYNHGGGYNGGG---YNHGGGGY---------NNGGG------YNHGGGGY--- 310
Query: 150 DCNRSNNNSGGG---GAGCYNCGDTGHLARDCNRSN-NSGGGG---GGGGACYTCGG 199
N+GGG G G YN G H N N GGGG GGGG Y C G
Sbjct: 311 -------NNGGGYNHGGGGYNGGGYNHGGGGYNGGGYNHGGGGYNHGGGGCQYHCHG 460
Score = 46.6 bits (109), Expect = 1e-05
Identities = 31/81 (38%), Positives = 36/81 (44%)
Frame = +2
Query: 88 GFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHL 147
G GG+ G N GGGG GG YN G G+ N+GGGG YN G G+
Sbjct: 257 GGGGYNNGGGYNHGGGGYNNGGGYNHGGGGYNG----GGYNHGGGGYNGGGYNHGGGGY- 421
Query: 148 ARDCNRSNNNSGGGGAGCYNC 168
N GGGG Y+C
Sbjct: 422 ---------NHGGGGCQ-YHC 454
Score = 43.9 bits (102), Expect = 8e-05
Identities = 32/97 (32%), Positives = 36/97 (36%)
Frame = +2
Query: 156 NNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGG 215
N+ GG G YN G G+ NN GG GGG GG+ H GG GG
Sbjct: 218 NHGGGYNGGGYNHGGGGY--------NNGGGYNHGGGGYNNGGGYNHGG-----GGYNGG 358
Query: 216 GGPGSASCFRCGGIGHMARDCATAKGPSSGGVGGGGC 252
G + GG H G GGGGC
Sbjct: 359 GYNHGGGGYNGGGYNH---------GGGGYNHGGGGC 442
Score = 38.5 bits (88), Expect = 0.003
Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +2
Query: 177 DCNRSNNSGGGGGGG---GACYTCGGFGHLARDCMRGG--NGGGGGPGSASCFRCGGIGH 231
+ N + GG GGG G Y GG+ H GG N GGGG + + GG G+
Sbjct: 170 EVNDAKYGGGYNGGGYNHGGGYNGGGYNHGGGGYNNGGGYNHGGGGYNNGGGYNHGGGGY 349
Query: 232 MARDCATAKGPSSGGVG-GGGCFRCGEVGHLARDCDGGVAVSGGGG 276
+ GG GGG + G H GG GGGG
Sbjct: 350 -----------NGGGYNHGGGGYNGGGYNH-----GGGGYNHGGGG 439
Score = 35.8 bits (81), Expect = 0.021
Identities = 34/113 (30%), Positives = 39/113 (34%)
Frame = +2
Query: 179 NRSNNSGGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCAT 238
N N++ GGG G Y GG G NGGG G GG H
Sbjct: 167 NEVNDAKYGGGYNGGGYNHGG----------GYNGGGYNHGGGGYNNGGGYNH------- 295
Query: 239 AKGPSSGGVGGGGCFRCGEVGHLARDCDGGVAVSGGGGNAGRNTCFNCGKPGH 291
GGGG G H +GG GGGG G +N G G+
Sbjct: 296 ---------GGGGYNNGGGYNHGGGGYNGGGYNHGGGGYNGGG--YNHGGGGY 421
>TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear protein.
[strain B95-8 Human herpesvirus 4] {Epstein-barr
virus}, partial (23%)
Length = 431
Score = 55.8 bits (133), Expect = 2e-08
Identities = 45/131 (34%), Positives = 48/131 (36%)
Frame = +1
Query: 87 RGFGGWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGH 146
R GG GG +GGGGGGG GG + G G GGG Y G G
Sbjct: 4 RDHGGGYGGGGGSGGGGGGGAGGAHGVG--------------YGSGGGTGGGYGGGSPG- 138
Query: 147 LARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARD 206
GGGG G SGGGGGGGGA G G
Sbjct: 139 ------------GGGGGG------------------GSGGGGGGGGAHGGAYGGG----- 213
Query: 207 CMRGGNGGGGG 217
+ GG GGG G
Sbjct: 214 -IGGGEGGGHG 243
Score = 45.4 bits (106), Expect = 3e-05
Identities = 36/95 (37%), Positives = 40/95 (41%)
Frame = +1
Query: 185 GGGGGGGGACYTCGGFGHLARDCMRGGNGGGGGPGSASCFRCGGIGHMARDCATAKGPSS 244
G GGGGGG G G+ + GG GGG G GS GG G G S
Sbjct: 37 GSGGGGGGGAGGAHGVGYGS----GGGTGGGYGGGSPG----GGGG----------GGGS 162
Query: 245 GGVGGGGCFRCGEVGHLARDCDGGVAVSGGGGNAG 279
GG GGGG G G GG+ GGG+ G
Sbjct: 163 GGGGGGGGAHGGAYG-------GGIGGGEGGGHGG 246
>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
Length = 1338
Score = 54.3 bits (129), Expect = 6e-08
Identities = 61/201 (30%), Positives = 66/201 (32%), Gaps = 12/201 (5%)
Frame = +1
Query: 91 GWRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARD 150
GW G GGG GGGGGG G L R R G GG + G G
Sbjct: 148 GWLWGRGGEGGGWGGGGGG-------GGLVRG--RRKEEGAWGGRDESWGGGWRG----- 285
Query: 151 CNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFGHLARDCMRG 210
SGGGG GG GGGG G G + RG
Sbjct: 286 -------SGGGG----------------------GGDGGGGNPAMGTKGGGGVELPMRRG 378
Query: 211 GNG------GGGGPGSASCFRCGG------IGHMARDCATAKGPSSGGVGGGGCFRCGEV 258
G G G GG G R GG +G +G + G V GGG C V
Sbjct: 379 GEGR*PWATGAGGGGRRVGGRRGGERRRAWVGGRTGWGGAGRGVAGGSVQGGGGLGCWGV 558
Query: 259 GHLARDCDGGVAVSGGGGNAG 279
V V GG G AG
Sbjct: 559 ---------RVVVDGGWGAAG 594
Score = 50.4 bits (119), Expect = 8e-07
Identities = 48/138 (34%), Positives = 52/138 (36%), Gaps = 7/138 (5%)
Frame = +2
Query: 89 FGGWRGGERRNGGGGGGG------GGGCYNCGDTGHLARDCHRSNNN-GGGGGGAACYNC 141
+GG GG R GGGGG G GGG G G R GGGGGG A
Sbjct: 146 WGGCGGGGGRGGGGGGEGEGEGWLGGGGKRKGRGGGETRAGGEDGGGVGGGGGGTA---G 316
Query: 142 GDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGGGGGGGGACYTCGGFG 201
G + N GGGA + G G R GG GGGGG G+G
Sbjct: 317 GGIPQWVQRAEGEWNCRCGGGARVDDRGRPG-------RGGEVGGWGGGGGESEGARGWG 475
Query: 202 HLARDCMRGGNGGGGGPG 219
GG GGG G
Sbjct: 476 --------GGRDGGGQAG 505
Score = 41.2 bits (95), Expect = 5e-04
Identities = 49/155 (31%), Positives = 59/155 (37%), Gaps = 9/155 (5%)
Frame = +1
Query: 71 GPNGAALQPTRKDSAPRGFGG----WRGGERRNGGGGGGGGGGCYNCGDTGHLARDCHRS 126
G G ++ RK+ +GG W GG R +GGGGGG GGG G+ A
Sbjct: 196 GGGGGLVRGRRKEEG--AWGGRDESWGGGWRGSGGGGGGDGGG-------GNPAM----- 333
Query: 127 NNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSNNSGG 186
GGGG G G R +G GG G G G R +G
Sbjct: 334 -GTKGGGGVELPMRRGGEG-------R*PWATGAGGGGRRVGGRRGGERRRAWVGGRTGW 489
Query: 187 GGGG----GGACYTCGGFGHL-ARDCMRGGNGGGG 216
GG G GG+ GG G R + GG G G
Sbjct: 490 GGAGRGVAGGSVQGGGGLGCWGVRVVVDGGWGAAG 594
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.144 0.482
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,741,284
Number of Sequences: 36976
Number of extensions: 237086
Number of successful extensions: 11608
Number of sequences better than 10.0: 446
Number of HSP's better than 10.0 without gapping: 2316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5947
length of query: 301
length of database: 9,014,727
effective HSP length: 96
effective length of query: 205
effective length of database: 5,465,031
effective search space: 1120331355
effective search space used: 1120331355
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0197.11