TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0192.15
         (1070 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC93066 weakly similar to GP|19920130|gb|AAM08562.1 Putative ret...   192  6e-49
BG587170 similar to PIR|F86470|F8 probable retroelement polyprot...   127  2e-29
BI262917 weakly similar to GP|19920130|g Putative retroelement {...   107  2e-25
AJ499215 weakly similar to GP|6642775|gb| gag-pol polyprotein {V...   102  8e-22
BG586273 weakly similar to PIR|F86470|F8 probable retroelement p...    87  3e-17
CB893805 similar to GP|10177935|d copia-type polyprotein {Arabid...    63  7e-10
BF631997 weakly similar to GP|18542925|gb Putative pol polyprote...    52  1e-07
BG644690 weakly similar to GP|18542179|gb putative pol protein {...    55  1e-07
TC93065                                                                49  8e-06
AW689768 weakly similar to GP|10177485|d polyprotein {Arabidopsi...    49  1e-05
BE239977 weakly similar to GP|23237899|db polyprotein-like {Oryz...    47  3e-05
BG587156 similar to PIR|G85055|G8 probable polyprotein [imported...    40  4e-05
BI272602 GP|11602812|db avenaIII {Gallus gallus}, partial (3%)         44  4e-04
BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana...    42  0.001
TC92908 similar to GP|10140704|gb|AAG13538.1 putative gag-pol po...    42  0.001
BG648737 weakly similar to GP|21433|emb|CA ORF3 {Solanum tuberos...    41  0.002
AW773859                                                               41  0.002
AW684891                                                               40  0.004
TC77595 weakly similar to PIR|T18350|T18350 probable pol polypro...    37  0.041
TC81195 similar to GP|15810597|gb|AAL07186.1 unknown protein {Ar...    34  0.34

>TC93066 weakly similar to GP|19920130|gb|AAM08562.1 Putative retroelement
           {Oryza sativa} [Oryza sativa (japonica cultivar-group)],
           partial (10%)
          Length = 823

 Score =  192 bits (488), Expect = 6e-49
 Identities = 108/260 (41%), Positives = 159/260 (60%), Gaps = 4/260 (1%)
 Frame = +1

Query: 257 EACERCLL-GMQRRVSFSTCKEWRAKDVLELIHTDVCGPMRTSSHDNNRYFILFTDDFSR 315
           E C+  L  G +++VSFST    R K +L+ IH+D+ GP + +S+   RY +   DDF R
Sbjct: 16  EFCKHLLFFGNRKKVSFSTATH-RTKGILDYIHSDLWGPSKVTSYGGRRYMMTIIDDFPR 192

Query: 316 MTWVYFLKAKSEVFRVFKKFKALVEKQSGKHIKVLRSDRGKEYTSREFDKFCEDEGIERQ 375
             WVYFL+ K+E F  FKK++ LVE Q+GK++K L +D   E+ S +F++FC + GI R 
Sbjct: 193 KVWVYFLRYKNETFPTFKKWRILVETQTGKNVKKLITDN*LEFCSSDFNEFCTNHGIARH 372

Query: 376 LTVAYIPQQNGVSERKKRTIMEMARSMLKEKGMHN-TFWWAEAVYTAVYILNRCPTNAVQ 434
            T+   PQQNGV+ER  RT++E AR ML   G+ N    W EA  TA +++NR P +A+ 
Sbjct: 373 KTIPRNPQQNGVAERMIRTLLERARCMLSNAGL*N*RDLWVEAASTACHLVNRSPHSALD 552

Query: 435 NKTPIEAWCGKKPSTKHLRVFGSICYTHVPDVKRHKLEDKNVRGIFLGYSTKSKGYRVY- 493
            K P + W G      +LR+FG   Y  V D    KL  +    IFL Y+++SKGYR++ 
Sbjct: 553 FKVPEDIWSGNLVDYSNLRIFGCPAYALVND---GKLAPRAGECIFLSYASESKGYRLWC 723

Query: 494 -NLQTKKLTISRDVEVDGNA 512
            + +++KL +SRDV  + +A
Sbjct: 724 SDPKSQKLILSRDVTFNEDA 783


>BG587170 similar to PIR|F86470|F8 probable retroelement polyprotein
           [imported] - Arabidopsis thaliana, partial (13%)
          Length = 718

 Score =  127 bits (319), Expect = 2e-29
 Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
 Frame = -3

Query: 209 YVANIAMKAQVDDSWLWHRRFGHFNTQVLKLLYQKNMMRDLPSLKESNEACERCLLGMQR 268
           Y  +    + ++   LWH R GH + + L L+        LP +   N+ CE C+LG   
Sbjct: 629 YKCSFTSSSSLNKDALWHARLGHPHGRALNLM--------LPGVVFENKNCEACILGKHC 474

Query: 269 RVSF---STCKEWRAKDVLELIHTDVCGPMRTSSHDNNRYFILFTDDFSRMTWVYFLKAK 325
           +  F   ST  E    +  +LI+TD+     + S DN++YF+ F D+ S+ TW+  + +K
Sbjct: 473 KNVFPRTSTVYE----NCFDLIYTDLW-TAPSLSRDNHKYFVTFIDEKSKYTWLTLIPSK 309

Query: 326 SEVFRVFKKFKALVEKQSGKHIKVLRSDRGKEYTSREFDKFCEDEGIERQLTVAYIPQQN 385
             V   FK F+A V       IK+LRSD G EYTS  F    +  GI  Q +  Y PQQN
Sbjct: 308 DRVIDAFKNFQAYVTNHYHAKIKILRSDNGGEYTSYAFKSHLDHHGILHQTSCPYTPQQN 129

Query: 386 GVSERKKRTIMEMARSMLKEKGMHNTFWWAEAVYTAVYILNRCPTNAVQNK 436
           GV++RK + +ME+ARS++ +            V TA Y++N  PT  ++ K
Sbjct: 128 GVAKRKNKHLMEVARSLMFQAN----------VSTACYLINWIPTKVLRIK 6


>BI262917 weakly similar to GP|19920130|g Putative retroelement {Oryza
           sativa} [Oryza sativa (japonica cultivar-group)],
           partial (8%)
          Length = 426

 Score =  107 bits (268), Expect(2) = 2e-25
 Identities = 55/117 (47%), Positives = 74/117 (63%)
 Frame = +1

Query: 378 VAYIPQQNGVSERKKRTIMEMARSMLKEKGMHNTFWWAEAVYTAVYILNRCPTNAVQNKT 437
           VA+ PQQNGV+ER  RT++E  R+MLK  GM  +FW AEAV TA Y++NR P+  +  KT
Sbjct: 76  VAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFW-AEAVKTACYVINRSPSTVIDLKT 252

Query: 438 PIEAWCGKKPSTKHLRVFGSICYTHVPDVKRHKLEDKNVRGIFLGYSTKSKGYRVYN 494
           P+E W GK      L VFG   Y      +R KL+ K+ + IFLGY+   KGY +++
Sbjct: 253 PMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYXLWD 423



 Score = 27.7 bits (60), Expect(2) = 2e-25
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 357 EYTSREFDKFCEDEGIERQLT 377
           EY   EF  FC+ EGI RQ T
Sbjct: 12  EYVDGEFLAFCKQEGIVRQFT 74


>AJ499215 weakly similar to GP|6642775|gb| gag-pol polyprotein {Vitis
           vinifera}, partial (18%)
          Length = 567

 Score =  102 bits (254), Expect = 8e-22
 Identities = 54/140 (38%), Positives = 89/140 (63%)
 Frame = +3

Query: 59  KNRHQANLAEEQEQDQYLLYATQDSARETGGSWYLDSGCSNHMAKDESIFKNIDDSVKVK 118
           KN+H+ +    +EQ   LL  +  + ++    W +DSGC++HM  D  +FK ++ S   K
Sbjct: 21  KNKHKPHQ*GSKEQ---LLAMSTFATKQPSKYWLIDSGCTHHMTHDRDLFKELNKSTISK 191

Query: 119 VRLGNGAVVESKGKGTVMVET*KGTRLISDVLLVPNLKENLLSIGQMIERGYTLHFEGDV 178
           VR+ NGA +E +G GTV+V++  G + IS+VL  P L ++LLS+ Q++ +GY + FE + 
Sbjct: 192 VRMLNGAHIEVEGIGTVLVKSHSGYKQISNVLYAPKLNQSLLSVPQLLTKGYKVLFEHEK 371

Query: 179 CRIYDKHDKRVEIAQVKMQK 198
           C I D+++K V  AQ+K +K
Sbjct: 372 CVIKDQNNKEVLRAQMKARK 431


>BG586273 weakly similar to PIR|F86470|F8 probable retroelement polyprotein
           [imported] - Arabidopsis thaliana, partial (7%)
          Length = 705

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 47/147 (31%), Positives = 80/147 (53%)
 Frame = -2

Query: 421 AVYILNRCPTNAVQNKTPIEAWCGKKPSTKHLRVFGSICYTHVPDVKRHKLEDKNVRGIF 480
           A Y++NR PT  ++++ P E    +KPS  ++RVFG +CY  VP   R+KLE ++ + +F
Sbjct: 704 ACYLINRIPTRVLKDQAPFEVLNQRKPSLTYMRVFGCLCYVLVPGELRNKLEARSRKAMF 525

Query: 481 LGYSTKSKGYRVYNLQTKKLTISRDVEVDGNASWNWDEEKVEKNILIPTQRPQEEVEEEA 540
           +GYST  KGY+ Y+ + +++ +SRDV+      +   EEK ++++   T      +    
Sbjct: 524 IGYSTTQKGYKCYDPEARRVLVSRDVKFIEERGYY--EEKNQEDLRDLTSDKAGVLRVIL 351

Query: 541 ENPGEPTSPPQQQEQQQDLSPESTPRR 567
           E  G   +  Q    +Q     + PRR
Sbjct: 350 EGLGIKMNQDQSTRSRQPEESSNEPRR 270


>CB893805 similar to GP|10177935|d copia-type polyprotein {Arabidopsis
           thaliana}, partial (14%)
          Length = 778

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 30/65 (46%), Positives = 41/65 (62%), Gaps = 4/65 (6%)
 Frame = +3

Query: 576 ETCNLAIL----EPESFEAASKQEVWVKAMEEEIKMIEKNNTWELVDCPHGKDIIGVKWV 631
           +T NL +L    +P +FE A K E W  +M  E++  E+NNTWEL D   G   IG+KW+
Sbjct: 3   KTQNLGMLTMTSDPTTFEEAVKSEKWRASMNNEMEATERNNTWELTDLRSGAKTIGLKWI 182

Query: 632 YKTKL 636
           +KTKL
Sbjct: 183 FKTKL 197


>BF631997 weakly similar to GP|18542925|gb Putative pol polyprotein {Oryza
           sativa}, partial (6%)
          Length = 650

 Score = 51.6 bits (122), Expect(2) = 1e-07
 Identities = 27/75 (36%), Positives = 41/75 (54%)
 Frame = -2

Query: 320 YFLKAKSEVFRVFKKFKALVEKQSGKHIKVLRSDRGKEYTSREFDKFCEDEGIERQLTVA 379
           + +K KSE F   +  +     + G+   V + + G E  S EF++ C++E I RQ TV 
Sbjct: 643 FMMKHKSEAFYFSRNGRFWSRVKQGRR*NVFKLNNGLEICSAEFNELCKEEHITRQYTVR 464

Query: 380 YIPQQNGVSERKKRT 394
             PQ+NGV+ER   T
Sbjct: 463 NTPQKNGVAERMNIT 419



 Score = 23.5 bits (49), Expect(2) = 1e-07
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 429 PTNAVQNKTPIEAWCGK 445
           P+ A+  KTP E W  K
Sbjct: 321 PSTAIDCKTPFEVWSNK 271


>BG644690 weakly similar to GP|18542179|gb putative pol protein {Zea mays},
           partial (22%)
          Length = 629

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 20/58 (34%), Positives = 38/58 (65%)
 Frame = -3

Query: 580 LAILEPESFEAASKQEVWVKAMEEEIKMIEKNNTWELVDCPHGKDIIGVKWVYKTKLK 637
           ++ +EP++ + A +   W+ +M+EE+   E++  W LV  P GK +IG +WV++ KL+
Sbjct: 600 ISSIEPKNVKEALRDADWINSMQEELHQFERSKVWYLVPRPEGKTVIGTRWVFRNKLE 427



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 24/86 (27%), Positives = 37/86 (42%)
 Frame = -1

Query: 679 NSSCSTKRLEHPSTRCQISFPQRCTRRRDLCGATTRFRVQRQ*KQSAKTKKSSIWLEASS 738
           NS C    ++     C+       ++R  +C AT+     R  K   + +  +IW EASS
Sbjct: 314 NSFCCIHGVQAVPNGCEECIY*WRSQRGGVCQATSWI*RCRGTKSCVQIE*DTIWSEASS 135

Query: 739 SSMVQSD*SVLHRSRFQEEQE*TYTI 764
            SMV     V     FQ+ Q+  Y +
Sbjct: 134 KSMV*KAVKVSAEEWFQKRQDRQYPV 57


>TC93065 
          Length = 783

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = +2

Query: 8   SRNFSKNSQDKNPPCSIC*RLGHAEADCRYRDKPQCNYCKKFGHMEKYCYSKNRHQ---A 64
           +++F    + K PPC  C +  H +  C YR   +C  C + GH+EK C +K   Q   A
Sbjct: 530 NQSFKSFGKKKFPPCPHCKKDTHLDKFCWYRPGVKCRACNQLGHVEKVCKNKTNQQEQEA 709

Query: 65  NLAEEQEQDQYLLY 78
            + E  ++D+  L+
Sbjct: 710 RVVEHHQEDEEPLF 751


>AW689768 weakly similar to GP|10177485|d polyprotein {Arabidopsis thaliana},
           partial (9%)
          Length = 675

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 23/61 (37%), Positives = 32/61 (51%)
 Frame = +1

Query: 597 WVKAMEEEIKMIEKNNTWELVDCPHGKDIIGVKWVYKTKLKP*WHYTKAQGEASSEGLLT 656
           W++AM+ E K +  N TW+LV  P  K  IG KWVY+ K  P     K +    ++G   
Sbjct: 97  WLQAMKTEYKALIDNKTWDLVPLPPHKKAIGCKWVYRVKENPDGSVNKFKARLVAKGFSQ 276

Query: 657 T 657
           T
Sbjct: 277 T 279


>BE239977 weakly similar to GP|23237899|db polyprotein-like {Oryza sativa
           (japonica cultivar-group)}, partial (2%)
          Length = 514

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
 Frame = -2

Query: 447 PSTKHL--RVFGSICYTHVPDVKRHKLEDKNVRGIFLGYSTKSKGYRVYNLQTKKLTISR 504
           P++ +L  R+FG   + H+    R K + + ++ +F+ YS+  KGYR Y+  ++K  +SR
Sbjct: 480 PTSNNLTPRIFGCTSFVHIHSDGRSKFDHRALKCVFIRYSSTQKGYRCYHPPSRKYFVSR 301

Query: 505 DVEVDGNASW-------NWDEEKVEKNILI--PTQRPQEEVEEEAEN 542
           DV      S+       +  + K ++++L+   T  P+ EVE   +N
Sbjct: 300 DVTFHEQESYFGQN*SSSGGKYKEDESLLLLDLTFGPEIEVETGGDN 160


>BG587156 similar to PIR|G85055|G8 probable polyprotein [imported] -
           Arabidopsis thaliana, partial (17%)
          Length = 618

 Score = 40.4 bits (93), Expect(2) = 4e-05
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -1

Query: 585 PESFEAASKQEVWVKAMEEEIKMIEKNNTWELVDCPHGKDIIGVKWVYKTKLK 637
           P S+E A + + W +++  E   + KN+TW   + P GK  +  +W++  K K
Sbjct: 558 PRSYEEAMEDKEWKESVGAEAGAMIKNDTWYESELPKGKKAVSSRWIFTIKYK 400



 Score = 25.8 bits (55), Expect(2) = 4e-05
 Identities = 25/109 (22%), Positives = 48/109 (43%)
 Frame = -3

Query: 635 KLKP*WHYTKAQGEASSEGLLTTT*HRLQ*DISTSGSS*YNKSSNSSCSTKRLEHPSTRC 694
           +++ *W   + +   SS+ + +     L *DI TS  + +N +         +   +  C
Sbjct: 409 QVQG*WVD*EEEN*TSSKRVYSDIWRGLH*DICTSSQATHN*NCFKLGCEPWMGIVANGC 230

Query: 695 QISFPQRCTRRRDLCGATTRFRVQRQ*KQSAKTKKSSIWLEASSSSMVQ 743
           +     R T    L  ++TR     + ++  + K+  +W EA + SMVQ
Sbjct: 229 EECISTRRT*G*SLYVSSTRS*TSSEERECTEVKEGYLWAEAITKSMVQ 83


>BI272602 GP|11602812|db avenaIII {Gallus gallus}, partial (3%)
          Length = 488

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/134 (22%), Positives = 54/134 (39%), Gaps = 10/134 (7%)
 Frame = +1

Query: 517 DEEKVEKNILI--PTQRPQEEVEEEAENPGEPTSPPQQQEQQQDLSPES---TPRRVRFL 571
           +  +V +NI I  P      E+     +P  P  PP       + +        R    +
Sbjct: 37  NSNEVAQNIQISSPASPTSNELANITTSPTPPPPPPPTARPHNNHTTNVGGIITRSQNNI 216

Query: 572 VDVYETCNLAI-----LEPESFEAASKQEVWVKAMEEEIKMIEKNNTWELVDCPHGKDII 626
           V   +  NL +     +EP +   A +   W   M++E   ++ NNTW+LV     ++++
Sbjct: 217 VKTIKKLNLHVRPLCPIEPSNITQALRDHDWRSIMQDEFDALQNNNTWDLVSRSFAQNLV 396

Query: 627 GVKWVYKTKLKP*W 640
           G K  +  + K  W
Sbjct: 397 GCKLGFSYQTKSGW 438


>BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana}, partial
           (10%)
          Length = 624

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
 Frame = +2

Query: 282 DVLELIHTDVCGPMRTSSHDNNRYFILFTDDFSRMTWVYFLKAKS-EVFRVFKKFKALVE 340
           +V ++   D  GP  +S   NN+Y ++  D  S+  WV  + + + +   V K FK+++ 
Sbjct: 305 EVFDVWGIDFMGPFPSSY--NNKYILVAVDYVSK--WVEAIASPTNDATVVVKMFKSVIF 472

Query: 341 KQSGKHIKVLRSDRGKEYTSREFDKFCEDEGIERQLTVAYIPQQNGVSERKK 392
            + G   +V+ SD G  + ++ F+K  +  G+  ++  AY PQ+   +ER K
Sbjct: 473 PRFGVP-RVVISDGGSHFINKVFEKLLKKNGVRHKVATAYHPQK---AERSK 616


>TC92908 similar to GP|10140704|gb|AAG13538.1 putative gag-pol polyprotein
           {Oryza sativa}, partial (1%)
          Length = 638

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 19/51 (37%), Positives = 34/51 (66%)
 Frame = +2

Query: 583 LEPESFEAASKQEVWVKAMEEEIKMIEKNNTWELVDCPHGKDIIGVKWVYK 633
           +EP+++  A++ + W+ AME+EI+++E+NNT  L     GK  +  + VYK
Sbjct: 275 IEPKNYVQAAQ*QEWLAAMEQEIQVLEENNTSTLEPLREGKKWVDCRPVYK 427


>BG648737 weakly similar to GP|21433|emb|CA ORF3 {Solanum tuberosum}, partial
           (10%)
          Length = 804

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
 Frame = +3

Query: 490 YRVYNLQTKKLTISRDVEVD--GNASWNWDEEKVEKNIL---IPTQRPQEEVEEEAENPG 544
           +RV+  + KK    R  ++    +++ N++ E  + N +   IPT    + +    ++  
Sbjct: 393 FRVFTTRYKKQEGKRMQQIQDCSDSNSNFEIENTQDNEICEPIPTVEFDDRLISLRKDKR 572

Query: 545 EPTSPPQQQEQQQDLSPESTPRRVRFLVDVYETCNLAILEPESFEAASKQEVWVKAMEEE 604
             TS P  +    D   + +P  + F+ ++ +     I  P S   +     W KA+  E
Sbjct: 573 SCTSHPICKFISYD---KLSPHHLAFVSNLDK-----IQIPNSVHESLTNP*WKKAILGE 728

Query: 605 IKMIEKNNTWELVDCPHGKDIIGVK 629
           I  +EKN TWEL D P GK  +G K
Sbjct: 729 IHALEKNETWELSDLPSGKHPMGCK 803


>AW773859 
          Length = 538

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = -3

Query: 224 LWHRRFGHFNTQVLKLLYQKNMMRDLPSLK-ESNEACERCLLGMQRRVSFSTCKEWRAKD 282
           LWH R GH + + L  L+      + P +  + N  C+ C     +++ F      RA  
Sbjct: 230 LWHFRLGHLSNRKLLSLHS-----NFPFITIDQNSVCDICHYSRHKKLPFQLSTN-RASK 69

Query: 283 VLELIHTDVCGPMRTSSHDNNR 304
             EL H D+ GP  T S  N R
Sbjct: 68  CYELFHFDIWGPFSTQSIHNQR 3


>AW684891 
          Length = 539

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 18/45 (40%), Positives = 28/45 (62%)
 Frame = -3

Query: 345 KHIKVLRSDRGKEYTSREFDKFCEDEGIERQLTVAYIPQQNGVSE 389
           K I+ L S++GK Y  +   ++ E+ G+ ++L     PQQNGVSE
Sbjct: 258 KSIERLCSNKGKVYVDQNLSQYLEENGVSQELKCVNSPQQNGVSE 124


>TC77595 weakly similar to PIR|T18350|T18350 probable pol polyprotein - rice
           blast fungus gypsy retroelement (fragment), partial
           (14%)
          Length = 1708

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +2

Query: 352 SDRGKEYTSREFDKFCEDEGIERQLTVAYIPQQNGVSERKKRTIMEMARS 401
           SDRG  +  R + +FC   G+ + L+ +Y PQ +G +ER  + I  + R+
Sbjct: 584 SDRGSNWVGRFWREFCRLTGVTQLLSTSYHPQTDGGTERWNQEIQAVLRA 733


>TC81195 similar to GP|15810597|gb|AAL07186.1 unknown protein {Arabidopsis
           thaliana}, partial (50%)
          Length = 788

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 15/52 (28%), Positives = 31/52 (58%)
 Frame = +3

Query: 517 DEEKVEKNILIPTQRPQEEVEEEAENPGEPTSPPQQQEQQQDLSPESTPRRV 568
           +EEK  +   +  ++P++ +++E E   E   PP ++E++ + S E TPR +
Sbjct: 132 EEEKKPEETKVEEKKPEQPLKKEEEKK-ETEKPPTEEEKKPEESKEVTPREI 284


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.331    0.140    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,731,226
Number of Sequences: 36976
Number of extensions: 508928
Number of successful extensions: 3063
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2276
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 712
Number of HSP's gapped (non-prelim): 2443
length of query: 1070
length of database: 9,014,727
effective HSP length: 106
effective length of query: 964
effective length of database: 5,095,271
effective search space: 4911841244
effective search space used: 4911841244
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 63 (28.9 bits)