TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0181.13
         (507 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW696887 similar to PIR|T07669|T07 cyclin a1-type  mitosis-speci...   121  6e-28
AW775066 similar to PIR|T07669|T07 cyclin a1-type  mitosis-speci...   101  8e-22
AW299045 weakly similar to GP|18175785|gb putative cyclin {Arabi...    96  3e-20
AL377325 homologue to GP|3608181|dbj cyclin B {Pisum sativum}, p...    94  2e-19
BF638466 similar to PIR|T07675|T076 cyclin a2-type  mitosis-spec...    88  9e-18
AW776255 weakly similar to PIR|T07672|T07 cyclin a2-type  mitosi...    82  5e-16
TC84410 similar to GP|15419009|gb|AAK81695.1 cyclin A2 {Medicago...    81  1e-15
TC92772 similar to GP|19347837|gb|AAL86330.1 putative prolyl end...    77  2e-14
TC79129 similar to PIR|A96725|A96725 hypothetical protein F20P5....    75  5e-14
AL383194 similar to GP|6031209|gb| cyclin {Pisum sativum}, parti...    73  2e-13
BG588004 similar to GP|7242793|emb| cyclin A3.1 {Pisum sativum},...    70  1e-12
TC81503 similar to GP|6448480|emb|CAB61221.1 cyclin D1 {Antirrhi...    50  3e-06
TC88466 similar to GP|6434199|emb|CAB60837.1 CycD3;2 {Lycopersic...    43  3e-04
TC79675 similar to GP|16604386|gb|AAL24199.1 At1g10700/F20B24.13...    37  0.023
TC76554 similar to GP|7295688|gb|AAF50994.1| CG11931 gene produc...    34  0.12
AW683883 similar to EGAD|126998|135 cyclin {Lupinus luteus}, par...    34  0.12
AW695001 PIR|T14004|T1 trfA protein - slime mold (Dictyostelium ...    34  0.12
BG585894 weakly similar to GP|19683051|gb| HDCKB03P (FRAGMENT). ...    34  0.15
TC79717 similar to GP|10086499|gb|AAG12559.1 Unknown Protein {Ar...    33  0.26
TC79501 similar to GP|9294059|dbj|BAB02016.1 MAP kinase {Arabido...    33  0.34

>AW696887 similar to PIR|T07669|T07 cyclin a1-type  mitosis-specific -
           soybean, partial (33%)
          Length = 648

 Score =  121 bits (304), Expect = 6e-28
 Identities = 61/117 (52%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
 Frame = +3

Query: 230 DNDHMDPQLCASFACDIYKHLRASEA--KKRPSTDFMEKVQKDINTSMRAILIDWLVEVA 287
           DN H    +   +  DI  +LR  E   K+RP   ++E VQ+ I+++MR  L+DWLVEVA
Sbjct: 309 DNQH----IIQPYVSDISDYLRTMEMQKKRRPMVGYLENVQRGISSNMRGTLVDWLVEVA 476

Query: 288 EEYRLVPDTLYLTVNYIDRYLSGNAMSRQKLQLLGVASMMIASKYEEICAPQVEEFC 344
           +EY+L+P+TL+L+V+YIDR+LS   +SR KLQLLGV+SM+IASKYEEI  P+  +FC
Sbjct: 477 DEYKLLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVSSMLIASKYEEITPPKAVDFC 647


>AW775066 similar to PIR|T07669|T07 cyclin a1-type  mitosis-specific -
           soybean, partial (31%)
          Length = 696

 Score =  101 bits (251), Expect = 8e-22
 Identities = 50/110 (45%), Positives = 73/110 (65%)
 Frame = +2

Query: 396 LQLESLTNYIAELSLMEYSMLCYAPSLVAASAIFLAKFILFPSIKPWSSTLQHYTLYQPS 455
           LQ+E L NY+AELSL++Y  + + PS+VAAS IFLA+FI+ P + P +S+L     Y+ +
Sbjct: 5   LQMEFLCNYLAELSLIDYECIRFLPSMVAASVIFLARFIICPGVHPLTSSLSECLFYKSA 184

Query: 456 DLCVCVKELHRLFCNSPNSNLPAIKEKYSQHKYKYVAKKYCPPSIPSEFF 505
           +L  CV  LH L+     ++L A++EKY QHK+K VA     P IP+ +F
Sbjct: 185 ELEECVLILHDLYLVRRAASLKAVREKYKQHKFKNVANLPSSPEIPNHYF 334


>AW299045 weakly similar to GP|18175785|gb putative cyclin {Arabidopsis
           thaliana}, partial (24%)
          Length = 646

 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 51/112 (45%), Positives = 70/112 (61%)
 Frame = -1

Query: 394 PSLQLESLTNYIAELSLMEYSMLCYAPSLVAASAIFLAKFILFPSIKPWSSTLQHYTLYQ 453
           PS++LE L N++AEL+LM Y  L + PS++AASA+FLA++ L  S  PW+ TL+HY  Y+
Sbjct: 637 PSVELEYLANFLAELTLMSYGFLNFFPSMIAASAVFLARWTLDQSRHPWNPTLEHYASYK 458

Query: 454 PSDLCVCVKELHRLFCNSPNSNLPAIKEKYSQHKYKYVAKKYCPPSIPSEFF 505
            SDL   V  L  L  NS +   PAI+ KY Q K+  VA     P++P   F
Sbjct: 457 ASDLKATVLALQNLQLNSDDCPYPAIRTKYRQSKFHGVA-VLSSPTLPETMF 305


>AL377325 homologue to GP|3608181|dbj cyclin B {Pisum sativum}, partial (45%)
          Length = 329

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 49/110 (44%), Positives = 76/110 (68%), Gaps = 2/110 (1%)
 Frame = +2

Query: 314 SRQKLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESEVLNFLKFEMTA 373
           SR++LQL+G+++M++ASKYEEI  P+V +F  ++D  Y  E++L ME  +L  L++ +T 
Sbjct: 2   SRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTV 181

Query: 374 PTIKCFLRRFVRAAQGVEEVPSLQ--LESLTNYIAELSLMEYSMLCYAPS 421
           PT   FL RF++AA  V  VPS Q  LE + ++++EL +M Y+ L Y PS
Sbjct: 182 PTPFVFLVRFIKAA-SVSAVPSDQGDLEMMAHFLSELGMMHYATLRYCPS 328


>BF638466 similar to PIR|T07675|T076 cyclin a2-type  mitosis-specific -
           soybean, partial (9%)
          Length = 566

 Score = 87.8 bits (216), Expect = 9e-18
 Identities = 65/141 (46%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
 Frame = +3

Query: 1   MSSNNHRRSSFSSSTASSLAKRHASDNNNNNNNNNNYVVGAAAVKAPAAASHSAKKRPPL 60
           MS+ N+RRSSFSSST SS+AKR        + NN   V+ A           SAKKRPPL
Sbjct: 156 MSNXNNRRSSFSSSTTSSMAKRXPPVTXLTSENNAGKVLAA-----------SAKKRPPL 302

Query: 61  SNLTNHIASRNSSSQSLVPCVSKFAKTKKEAPP-----------KVAPALPNVKSAAAAV 109
           +NLTN  +SRN+SS      V+K AKTKKE  P              P L NVKS  A V
Sbjct: 303 TNLTNQNSSRNNSS----TLVTKVAKTKKEPSPCNSSSSSVIXVNKKPTLSNVKS--ATV 464

Query: 110 VFPKVAT----ATASFTERNE 126
           VFPK  T     T+SF+ +NE
Sbjct: 465 VFPKAITTTTXTTSSFSGKNE 527


>AW776255 weakly similar to PIR|T07672|T07 cyclin a2-type  mitosis-specific -
           soybean, partial (22%)
          Length = 704

 Score = 82.0 bits (201), Expect = 5e-16
 Identities = 61/208 (29%), Positives = 98/208 (46%), Gaps = 8/208 (3%)
 Frame = +1

Query: 100 PNVKSAAAAVVFPKVATATASFTERNEDDAAAAASGAR-----VSVPVSTSMDVSPCKSD 154
           P+    A  V    V   +A   +R          G++     V+     S+ V   K D
Sbjct: 127 PSRNEQAVVVGLKDVTNISAKSHKRTHTSNFQKKEGSKKRKTNVASEDDVSLQVWTIKED 306

Query: 155 GCSVSMDESMSSCDSFKSPAEIE-YVDNSDVSAVDSIERKTFSILNISDAKEQAGNICSR 213
                  +S +S  + K   +++  V+NS +S  D++      I                
Sbjct: 307 AKKELAKDSSTSTMTKKESLQVQPSVENSLLSMQDTLNSPNTEI---------------- 438

Query: 214 DILVEELEK--GEKIVNIDNDHMDPQLCASFACDIYKHLRASEAKKRPSTDFMEKVQKDI 271
           +++ E+L    G  IV+ID+   D  +  S+A DIY ++   E ++RP  ++ME +Q+DI
Sbjct: 439 NLICEKLSASVGLGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDI 618

Query: 272 NTSMRAILIDWLVEVAEEYRLVPDTLYL 299
              MR IL+DWLVEVA+E++LV DTLYL
Sbjct: 619 TPGMRGILVDWLVEVADEFKLVSDTLYL 702


>TC84410 similar to GP|15419009|gb|AAK81695.1 cyclin A2 {Medicago sativa},
           partial (23%)
          Length = 771

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 48/125 (38%), Positives = 67/125 (53%)
 Frame = +1

Query: 176 IEYVDNSDVSAVDSIERKTFSILNISDAKEQAGNICSRDILVEELEKGEKIVNIDNDHMD 235
           + + DN+  + +     +  +   IS AK +  +    D  +    K   I NID D  D
Sbjct: 409 VSFEDNAPSNLIGGQTSEPSAQPLISQAKAKKDS----DSKLMNAPKDPDIPNIDADIED 576

Query: 236 PQLCASFACDIYKHLRASEAKKRPSTDFMEKVQKDINTSMRAILIDWLVEVAEEYRLVPD 295
           PQLC+ +A DIY +LR +E       +FME VQ+DI   MRAILIDWLVEV+  + L  +
Sbjct: 577 PQLCSFYAADIYDNLRVAELSXXXHPNFMETVQRDITXXMRAILIDWLVEVSXXFNLQAN 756

Query: 296 TLYLT 300
             YLT
Sbjct: 757 XXYLT 771


>TC92772 similar to GP|19347837|gb|AAL86330.1 putative prolyl endopeptidase
           {Arabidopsis thaliana}, partial (14%)
          Length = 531

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 37/73 (50%), Positives = 54/73 (73%)
 Frame = +3

Query: 311 NAMSRQKLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESEVLNFLKFE 370
           N + R++LQL+G++SM+IASKYEEI AP+V +F  I+DN Y +E+VL ME  +L  L++ 
Sbjct: 312 NQVPRKELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVREQVLVMEKTILRNLEWY 491

Query: 371 MTAPTIKCFLRRF 383
           +T PT   FL R+
Sbjct: 492 LTVPTPYVFLVRY 530


>TC79129 similar to PIR|A96725|A96725 hypothetical protein F20P5.7
           [imported] - Arabidopsis thaliana, partial (64%)
          Length = 1328

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
 Frame = +2

Query: 254 EAKKRPSTDFMEKVQ-KDINTSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNA 312
           E K  P  D++ + Q + + +S R   I W+++V E Y   P T YL+VNY+DR+L    
Sbjct: 293 EFKFVPGFDYVSRFQSRSLESSTREEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRP 472

Query: 313 MSRQK---LQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFK-EEVLQMESEVLNFLK 368
           +       LQLL VA + +A+K EE   P + +F        F+   +L+ME  VL  L 
Sbjct: 473 LPESNGWPLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILD 652

Query: 369 FEMTAPTIKCFLRRFVRAAQGVEEVPSLQLESLTNYIAELSLMEYSMLCYAPSLVAASAI 428
           + + + T   FL  F              +   T  I   ++ + S L Y PS +AA+AI
Sbjct: 653 WRLRSITPLSFLSFFACKLDSTGTFTHFIISRATEIILS-NIQDASFLTYRPSCIAAAAI 829

Query: 429 FLA 431
             A
Sbjct: 830 LSA 838


>AL383194 similar to GP|6031209|gb| cyclin {Pisum sativum}, partial (55%)
          Length = 435

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = +2

Query: 353 KEEVLQMESEVLNFLKFEMTAPTIKCFLRRFVRAAQGVEEVPSLQLESLTNYIAELSLME 412
           ++++L ME  +L  LKF + APT   FL RF++AAQ       ++LE +  ++ +L L+E
Sbjct: 2   RDQMLGMEKLILRKLKFRLNAPTPYVFLIRFLKAAQS-----DMKLEHMAFFLIDLCLVE 166

Query: 413 YSMLCYAPSLVAASAIFLAKFILFPSIKP-WSSTLQHYTLYQPSDLCVCVKELHRLFCNS 471
           Y  L + PSL+ AS +++A+  L   I P W+  LQ +  Y+ S +  C   + +    +
Sbjct: 167 YEALAFKPSLLCASXLYVARCTL--XITPSWTPLLQKHARYEVSQIXDCADMILKFHKAA 340

Query: 472 PNSNLPAIKEKYSQHKYKYVA 492
               L    EKYS+ +   VA
Sbjct: 341 GKGKLTVAYEKYSRKELGGVA 403


>BG588004 similar to GP|7242793|emb| cyclin A3.1 {Pisum sativum}, partial
           (22%)
          Length = 713

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = +2

Query: 218 EELEKGEKIVNIDNDHMDPQLCASFACDIYKHLRASE--AKKRPSTDFMEKVQKDINTSM 275
           E+LEK E          DPQLC ++  DIY +LR  E  + KRP  D+++KVQ+D+N SM
Sbjct: 497 EKLEKFE----------DPQLCETYVSDIYDYLRNMEVDSSKRPLCDYIQKVQRDVNASM 646

Query: 276 RAILIDWLVEVAEEYRL 292
           R +L+DWL EVAE+  L
Sbjct: 647 RGVLVDWLGEVAEDTSL 697


>TC81503 similar to GP|6448480|emb|CAB61221.1 cyclin D1 {Antirrhinum majus},
           partial (36%)
          Length = 1000

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 43/81 (52%), Gaps = 3/81 (3%)
 Frame = +3

Query: 263 FMEKVQKDINTSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMSRQK---LQ 319
           F++      ++  R   I W+++V   Y   P T YL VNY+DR+L+   + +     LQ
Sbjct: 345 FVKMKSSSFDSDARDESIRWILKVQGYYGFQPVTAYLAVNYMDRFLNSRRLPQTNGWPLQ 524

Query: 320 LLGVASMMIASKYEEICAPQV 340
           LL VA + +A+K EE   P +
Sbjct: 525 LLSVACLSLAAKMEETLVPSL 587


>TC88466 similar to GP|6434199|emb|CAB60837.1 CycD3;2 {Lycopersicon
           esculentum}, partial (39%)
          Length = 692

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
 Frame = +2

Query: 227 VNIDNDHMDPQLCASFACDIY---KHLRASEAKKRPSTDFMEKVQKDINTSMRAILIDWL 283
           V+++N  ++   C+    D++   + L++   K++ +  ++      +  + R   I+W+
Sbjct: 41  VSLNNTTINTTTCSLLETDMFWEDEELKSLLNKEQQNPLYIFLQTNPVLETARRESIEWI 220

Query: 284 VEVAEEYRLVPDTLYLTVNYIDRYLSGNAMSRQK---LQLLGVASMMIASKYEEICAPQV 340
           ++V   Y     T  L VNY+DR+L       +K    QL  VA + +A+K EE   P +
Sbjct: 221 LKVNAHYSFSALTSVLAVNYLDRFLFSFRFQNEKPWMTQLAAVACLSLAAKMEETHVPLL 400

Query: 341 EEF--CYI 346
            +   C+I
Sbjct: 401 LDLQVCFI 424


>TC79675 similar to GP|16604386|gb|AAL24199.1 At1g10700/F20B24.13
           {Arabidopsis thaliana}, partial (45%)
          Length = 907

 Score = 36.6 bits (83), Expect = 0.023
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +3

Query: 26  DNNNNNNNNNNYVVGAAAVKAPAAASHSAK 55
           +NNNNNNNNNN    ++ V A +A+ H+ K
Sbjct: 258 NNNNNNNNNNNSSFSSSLVSASSASQHAMK 347


>TC76554 similar to GP|7295688|gb|AAF50994.1| CG11931 gene product
           {Drosophila melanogaster}, partial (42%)
          Length = 861

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 12  SSSTASSLAKRHASDNNNNNNNNNN 36
           SSS   S +  ++S NNNNNNNNNN
Sbjct: 587 SSSNGGSGSSSNSSTNNNNNNNNNN 513



 Score = 33.5 bits (75), Expect = 0.20
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -2

Query: 6   HRRSSFSSSTASSLAKRHASDNNNNNNNNNN 36
           +  SS   S +SS +  + ++NNNNNNNNNN
Sbjct: 593 YNSSSNGGSGSSSNSSTNNNNNNNNNNNNNN 501



 Score = 33.5 bits (75), Expect = 0.20
 Identities = 14/32 (43%), Positives = 21/32 (64%)
 Frame = -2

Query: 5   NHRRSSFSSSTASSLAKRHASDNNNNNNNNNN 36
           N   +  S S+++S    + ++NNNNNNNNNN
Sbjct: 590 NSSSNGGSGSSSNSSTNNNNNNNNNNNNNNNN 495



 Score = 33.1 bits (74), Expect = 0.26
 Identities = 14/36 (38%), Positives = 21/36 (57%)
 Frame = -2

Query: 4   NNHRRSSFSSSTASSLAKRHASDNNNNNNNNNNYVV 39
           N+       SS+ SS    + ++NNNNNNNNN + +
Sbjct: 590 NSSSNGGSGSSSNSSTNNNNNNNNNNNNNNNNTHFI 483



 Score = 29.3 bits (64), Expect = 3.7
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = -2

Query: 10  SFSSSTASSLAKRHASDNNNNNNNNNN 36
           +++SS+         S  NNNNNNNNN
Sbjct: 596 TYNSSSNGGSGSSSNSSTNNNNNNNNN 516


>AW683883 similar to EGAD|126998|135 cyclin {Lupinus luteus}, partial (12%)
          Length = 217

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 442 WSSTLQHYTLYQPSDLCVCVKELHRLFCNSPNSNLPAIKEKY 483
           W+ TL+HYT Y    L  C K +      +P S L AI +K+
Sbjct: 26  WTDTLKHYTGYSEEQLRDCAKLMASFHSAAPESRLRAIYKKF 151


>AW695001 PIR|T14004|T1 trfA protein - slime mold (Dictyostelium discoideum),
           partial (1%)
          Length = 609

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +3

Query: 2   SSNNHRRSSFSSSTASSLAKRHASDNNNNNNNNN 35
           SS   +++  +  TA++  K+H + NNNNNNNNN
Sbjct: 318 SSQKQKKTKTNPKTATT--KKHQNKNNNNNNNNN 413


>BG585894 weakly similar to GP|19683051|gb| HDCKB03P (FRAGMENT). 10/100
           {Dictyostelium discoideum}, partial (7%)
          Length = 816

 Score = 33.9 bits (76), Expect = 0.15
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
 Frame = +1

Query: 10  SFSSSTASSLAKRHASDNNNNNNNNNNYVVGAAAVKAPAAASHSAKKRPPLSNLTNHIAS 69
           + S S  +++   +   N+N NNNNN  VV  A  +    +++S     PL+       S
Sbjct: 76  NLSKSPPNNINNSNCGSNSNFNNNNN--VVSTAPKQTQQKSANSRPVPKPLN------LS 231

Query: 70  RNSSSQSLVPCVSKFAKTKKEA--PPKVAPALPNVKSAAAAVVFP 112
           ++SSSQ     VS   +  + A  PPKV  AL N+ +      FP
Sbjct: 232 KSSSSQ-----VSNLGRLPQTATFPPKVNRAL-NLPNPPKTATFP 348


>TC79717 similar to GP|10086499|gb|AAG12559.1 Unknown Protein {Arabidopsis
            thaliana}, partial (5%)
          Length = 1579

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = +2

Query: 4    NNHRRSSFSSSTASSLAKRHASDNNNNNNNNNNYVVGAAAVKAPAAASHSAKKRPPLSNL 63
            N  RR+SF S       +    DN+++NN    ++    + KA   A+ S +  P + + 
Sbjct: 1133 NGKRRNSFGSIKPEHTDQEPTKDNSSSNNTLPRFMQATQSAKAKINANSSPRSSPDVHDT 1312

Query: 64   TNHIASRNS 72
              +I  R+S
Sbjct: 1313 DINIKKRHS 1339


>TC79501 similar to GP|9294059|dbj|BAB02016.1 MAP kinase {Arabidopsis
           thaliana}, partial (18%)
          Length = 1093

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 7   RRSSFSSSTASSLAKRHASDNNNNNNNNN 35
           +R S ++ST+    ++H   N+NNNNNNN
Sbjct: 164 QRRSSTTSTSKQQQQQHQHSNDNNNNNNN 250



 Score = 32.3 bits (72), Expect = 0.44
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 7   RRSSFSSSTASSLAKRHASDNNNNNNNNN 35
           R S+ S+S       +H++DNNNNNNN N
Sbjct: 170 RSSTTSTSKQQQQQHQHSNDNNNNNNNIN 256



 Score = 31.2 bits (69), Expect = 0.98
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 7   RRSSFSSSTASSLAKRHASDNNNNNNNNNN 36
           RRSS +S++     +   S++NNNNNNN N
Sbjct: 167 RRSSTTSTSKQQQQQHQHSNDNNNNNNNIN 256



 Score = 28.9 bits (63), Expect = 4.9
 Identities = 11/27 (40%), Positives = 20/27 (73%)
 Frame = +2

Query: 12  SSSTASSLAKRHASDNNNNNNNNNNYV 38
           SS+T++S  ++    ++N+NNNNNN +
Sbjct: 173 SSTTSTSKQQQQQHQHSNDNNNNNNNI 253


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.315    0.127    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,565,320
Number of Sequences: 36976
Number of extensions: 224513
Number of successful extensions: 3258
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 1961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2602
length of query: 507
length of database: 9,014,727
effective HSP length: 100
effective length of query: 407
effective length of database: 5,317,127
effective search space: 2164070689
effective search space used: 2164070689
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)