TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0101.7
         (629 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ...    65  6e-11
TC86635 weakly similar to GP|9758600|dbj|BAB09233.1 gene_id:MDF2...    50  3e-06
TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-...    48  1e-05
TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone d...    48  1e-05
BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophi...    43  4e-04
TC91772 weakly similar to GP|17380998|gb|AAL36311.1 unknown prot...    39  0.005
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf...    39  0.008
AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapi...    38  0.010
TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ...    37  0.018
TC81143 weakly similar to PIR|T08562|T08562 hypothetical protein...    37  0.018
TC87846 similar to GP|5821151|dbj|BAA83717.1 RNA binding protein...    37  0.023
TC77056 similar to GP|15982817|gb|AAL09756.1 At2g20760/F5H14.27 ...    36  0.039
TC79086 similar to GP|23499033|emb|CAD51113. ubiquitin-protein l...    36  0.051
TC78700 similar to GP|21554835|gb|AAM63703.1 unknown {Arabidopsi...    35  0.087
TC79379 similar to GP|11994401|dbj|BAB02360. protein phosphatase...    35  0.11
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba...    34  0.15
TC87387 homologue to PIR|T47775|T47775 hypothetical protein F24I...    34  0.19
TC78654 similar to GP|9758185|dbj|BAB08570.1 gene_id:MTE17.25~pi...    34  0.19
BM779021 homologue to PIR|T05883|T058 ATP-dependent helicase F6H...    33  0.25
TC77549 similar to GP|21592984|gb|AAM64933.1 photolyase/blue-lig...    33  0.33

>TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
           partial (61%)
          Length = 1288

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 75/336 (22%), Positives = 136/336 (40%), Gaps = 17/336 (5%)
 Frame = +3

Query: 2   SQSSGRKESVKAKIERTAKGVKCMGLKSD--PSQPSSVSKKA------SKKKRSRNPTCK 53
           S+ S   E  +  ++  A   K    K +   +QP + S+++      S ++  + P  K
Sbjct: 297 SEESSESEDEQPVVKAPAPSKKTPAKKGNVKKAQPETTSEESDSDSSSSDEEEVKKPVSK 476

Query: 54  VYKSQVKNSKAPNVPILEDVPDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQET 113
              S+  ++ A  V   E+  D EE +DED    +      +  A  +   S      E+
Sbjct: 477 AVPSKNGSAPAKKVDTSEE-EDSEESSDEDKKPAAKAVPSKNGSAPAKKAASDEEDTDES 653

Query: 114 PGKDSTSHENSGDAT-TPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASD 172
             +D    + +  A  + N SV +   D +  + +SE ++ E+   A  + +N+S     
Sbjct: 654 SDEDEEDEKPAAKAVPSKNGSVPAKKADTESSDEDSESSDEEDKKPAAKASKNVSAPTKK 833

Query: 173 DVPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSK---GKQKE 229
               ++  +D  +   +  + VS P      SKK  S         +S + K     +KE
Sbjct: 834 AASSSDEESDEESDEDEDAKPVSKPAAVAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKE 1013

Query: 230 DKTPTEKKKRKTPVDVEDSESD----VEVGVQDIRSSDKKKFSGKRVPQNVPAVPIDRVS 285
           DK   +K    +    E+SE +     +  ++D+   D  K SGK+ P N PA PI    
Sbjct: 1014DKMNVDKDGSDSDQSEEESEDEPSKTPQKKIKDVEMVDAGK-SGKKAP-NTPATPI---- 1175

Query: 286 FHLEENVQKWKFVCKRRMAKER-DVGSDVLECRDVI 320
              E +  K  FV     + +R D+     +C +V+
Sbjct: 1176---ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVV 1274


>TC86635 weakly similar to GP|9758600|dbj|BAB09233.1
           gene_id:MDF20.10~pir||T08929~similar to unknown protein
           {Arabidopsis thaliana}, partial (32%)
          Length = 1963

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 7/235 (2%)
 Frame = +2

Query: 8   KESVKAKIERTAKGVKCMGLKSDPSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNV 67
           KES K +     +G    G        +S S+ + K+++    +  V K    ++     
Sbjct: 755 KESSKKRRRTVKRGTPRSG-------GASTSRGSGKRQKKNEDSSGVEKKSTTDT----- 898

Query: 68  PILEDVPDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDA 127
              ED  + EE N+E+     P + +P+   D     S+     ++  +     +    +
Sbjct: 899 ---EDESEGEEKNEENDD--EPENDIPEKSEDETPQKSEREDKSDSGSESEDVKKRKRPS 1063

Query: 128 TTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAAR 187
            T +    S+ +    K+  +  + S  P +AP    N    + DD+    + +  V +R
Sbjct: 1064KTSSAKKESAGRSKTEKSTVTNKSRSPPPKRAPKKSSNTRPKSDDDI----NESPKVFSR 1231

Query: 188 MKK-----KRRVSSPEVTPTSSK-KSKSSPITYKSRQASVKSKGKQKE-DKTPTE 235
            KK     K+++S+P  T +SSK K K+  +T        K KGK+KE   +PT+
Sbjct: 1232KKKSEQGGKQKISTPTPTKSSSKSKEKTEKVT--------KGKGKKKETSSSPTD 1372


>TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-related
           protein complex AP-3  beta 1 subunit {Mus musculus},
           partial (2%)
          Length = 931

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 59/254 (23%), Positives = 98/254 (38%)
 Frame = +1

Query: 14  KIERTAKGVKCMGLKSDPSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDV 73
           K     K  K + L  DP  P++ S    +   ++ P  KV   Q ++S +         
Sbjct: 49  KFSMAPKPKKRLALVDDP--PTASSSDEEQPPSTQKPADKVVNEQDEDSSS--------- 195

Query: 74  PDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNIS 133
            +EEE ++ED              +  E    + +  Q+TP KDS     +   +TP   
Sbjct: 196 -EEEEGDEEDG-------------SSSEDEEEEDNQTQQTPSKDSKPASKNPPPSTP--- 324

Query: 134 VSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAARMKKKRR 193
             S+ K A+ ++G+  G  SE   ++ +  ++ S+      P             K K  
Sbjct: 325 -ISNPKPAESESGSESG--SESGTESDSEPEHKSEPTPPPNP-------------KVKPL 456

Query: 194 VSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVEDSESDVE 253
            S P  T T + +++S+P+  KS    V       + K    KKK  T     D E++VE
Sbjct: 457 ASKPMKTQTQA-QAQSTPVPIKSGTKRVAESSTGNDSK--RSKKKTTTAGGGSDDENEVE 627

Query: 254 VGVQDIRSSDKKKF 267
              +      KK F
Sbjct: 628 EDAKLTGEDSKKNF 669


>TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone deacetylase
           HD2-P39 {Glycine max}, partial (47%)
          Length = 1233

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 51/194 (26%), Positives = 76/194 (38%), Gaps = 12/194 (6%)
 Frame = +2

Query: 61  NSKAPNVPIL------EDVPDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETP 114
           NSKA +V         ED  D EE  + DS  +  P +        E  G     A+E  
Sbjct: 317 NSKAASVHFCGYKAYYEDNDDSEEEGETDSEDEDIPLIT------TEQNGKPEPKAEELK 478

Query: 115 GKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNS--EEPNQAPASVQNISDDASD 172
             +    +    A   N + +   K  DPK+ +S+  +   +E   +   ++N   D+ D
Sbjct: 479 VSEPKKADAKNAAPAKNAATAKHVKVVDPKDEDSDDDDESDDEIGSSDDEMENADSDSED 658

Query: 173 DVPLTESFADSVAAR---MKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQK- 228
           +    E   +    +     KKR   S   TP SSKKSK++           K+ GK+  
Sbjct: 659 EDDSDEDDEEETPVKKVDQGKKRPNESASKTPISSKKSKNA--------TPEKTDGKKAG 814

Query: 229 EDKTPTEKKKRKTP 242
              TP  KK  KTP
Sbjct: 815 HTATPHPKKGGKTP 856


>BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophila
           melanogaster}, partial (2%)
          Length = 734

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 46/201 (22%), Positives = 79/201 (38%), Gaps = 22/201 (10%)
 Frame = +1

Query: 68  PILEDVPDEEEINDEDSPVKSPPDVVPDVVADVETT----GSKGSSAQETPGKDSTSHEN 123
           P  E    E E N   +P KS  DV P+    +E +    G+   S  ETP K  T   N
Sbjct: 25  PEKETTTTESETN---TPTKSETDV-PETTTTIEKSKNDLGTTTESETETPTKSET---N 183

Query: 124 SGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQ---NISDDASDDVPLTESF 180
             + TT    V + S++   +    E T      +A  + +   N    +  DVP T + 
Sbjct: 184 VPETTTTEPIVQTDSEETPTEKPEKETTTKTTKPEAETTTEPETNTPTKSETDVPETTTT 363

Query: 181 ADS------------VAARMKKKRRVSSPEVTPTSSKKS---KSSPITYKSRQASVKSKG 225
            +                  K +   ++ E TPT   ++   K++  + K++  + +   
Sbjct: 364 LEKNQNVPGSTTESETETPTKSETETTTTEETPTEKPETDIPKTTTASEKNKTTTTEPTV 543

Query: 226 KQKEDKTPTEKKKRKTPVDVE 246
               ++TPTEK +++T    E
Sbjct: 544 PTVSEETPTEKPEKETTTTPE 606



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 29/154 (18%), Positives = 61/154 (38%), Gaps = 15/154 (9%)
 Frame = +1

Query: 114 PGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDD 173
           P K++T+ E+  +  T + +    +     K+ N  GT +E   + P   +    + +  
Sbjct: 25  PEKETTTTESETNTPTKSETDVPETTTTIEKSKNDLGTTTESETETPTKSETNVPETTTT 204

Query: 174 VPLTESFADSVAARMKKKR---RVSSPEV---------TPTSSKKSKSSPITYKSRQASV 221
            P+ ++ ++       +K    + + PE          TPT S+       T   +  +V
Sbjct: 205 EPIVQTDSEETPTEKPEKETTTKTTKPEAETTTEPETNTPTKSETDVPETTTTLEKNQNV 384

Query: 222 KSKGKQKEDKTPTEKKKRKTPVD---VEDSESDV 252
                + E +TPT+ +   T  +    E  E+D+
Sbjct: 385 PGSTTESETETPTKSETETTTTEETPTEKPETDI 486


>TC91772 weakly similar to GP|17380998|gb|AAL36311.1 unknown protein
           {Arabidopsis thaliana}, partial (17%)
          Length = 1237

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 58/257 (22%), Positives = 106/257 (40%), Gaps = 15/257 (5%)
 Frame = +2

Query: 9   ESVKAKIERTAKGVKCMGLKSDPSQPSSVSKKA---SKKKRSRNPTCKVYKSQVKNSKAP 65
           E + +K  +  + V+  G K+  S+ +  SKK+   S+K+  +    K  K +V  S   
Sbjct: 128 EKIDSKEPKPERSVRRKGKKASSSKSTKPSKKSNVVSEKEAEKTADSKSSKKEVPISLNE 307

Query: 66  NVPILEDVPDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSH-ENS 124
           +  ++E     E   +  + + SP              G   S A  +P    ++H EN 
Sbjct: 308 D-SVVEATGTSENDKEIKAKISSPK------------AGGLESDAAGSPSPSESNHDENR 448

Query: 125 GDATTPNISVSSSSKDA---DPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTES-F 180
                      SS+K+    D     SEGT+  +   A  S +     +SD   +  +  
Sbjct: 449 SKKRVRTKKNDSSAKEVAAEDISKKVSEGTSDSKVKPARPSAKKGPIRSSDVKTVVHAVM 628

Query: 181 ADSVAARMKKKRRVSSPEVTPTSSKK-SKSSP-----ITYKSRQASVKSKGKQKEDKTPT 234
           AD  ++ +K + +     V  +S K  +KSS      +T  S +++ K+   +  ++TP 
Sbjct: 629 ADVGSSSLKPEDKKKKTHVKGSSEKGLAKSSAEDEDKVTVSSLKSATKTTKDEHSEETPK 808

Query: 235 EKKKRK-TPVDVEDSES 250
              KRK TP   + S++
Sbjct: 809 TTLKRKRTPGKEKGSDT 859


>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
            erythrocyte surface antigen {Plasmodium falciparum},
            partial (2%)
          Length = 2007

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
 Frame = +1

Query: 101  ETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAP 160
            E    + SSA+         + NSG + T +   ++ +KD+     +SE  NS E N   
Sbjct: 1252 EQKKDESSSAESKSESSQNDNANSGQSNTTSDESANDNKDSSQVTTSSE--NSAEGN--- 1416

Query: 161  ASVQNISDDASDDVPLTESFAD----SVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKS 216
            ++ +N SD+  +D    E+  D    S  A + + +  ++ + T TS  +  +   + +S
Sbjct: 1417 SNTENNSDENQNDSKNNENTNDSGNTSNDANVNENQNENAAQ-TKTSENEGDAQNESVES 1593

Query: 217  RQASVKSKGKQKEDKT-PTEKKKRKTPVDVEDSESDVEVG 255
            ++ + +S  K  ++ +   ++    T V  +D ES V++G
Sbjct: 1594 KKENNESAHKDVDNNSNSNDQGSSDTSVTQDDKESRVDLG 1713



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 54/255 (21%), Positives = 96/255 (37%), Gaps = 17/255 (6%)
 Frame = +1

Query: 32   SQPSSVSKKASKKKRSRNPTCKVYKSQV---KNSKAPNVPILEDVP--DEEEINDEDSPV 86
            +Q S  ++    + ++ N T K   S+    K  +  N    +DV   D    N  D+  
Sbjct: 757  TQNSQGNESEKDQAQTENDTPKGSASESDEQKQEQEQNNTTKDDVQTTDTSSQNGNDTTE 936

Query: 87   KSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSSSSKD------ 140
            K       +   D  +     S+   TP  + +    +GD      + SSS         
Sbjct: 937  KQN-----ETSEDANSKKEDSSALNTTPNNEDSKSGVAGDQADSTTTTSSSETQDGNTNH 1101

Query: 141  ---ADPKNGNSEGTNSEEPNQAPASVQNISDD---ASDDVPLTESFADSVAARMKKKRRV 194
                D  N N E  + +E  Q   S  N  D+   AS+ V LT +   S  +  +KK   
Sbjct: 1102 GEYKDTTNENPEKNSGQEGTQESGSSSNTFDNKDAASNKVQLTTT---SDTSSEQKKDES 1272

Query: 195  SSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVEDSESDVEV 254
            SS E    SS+   ++  + +S   S +S    K+    T   +     +  ++E++ + 
Sbjct: 1273 SSAESKSESSQNDNAN--SGQSNTTSDESANDNKDSSQVTTSSENSAEGN-SNTENNSDE 1443

Query: 255  GVQDIRSSDKKKFSG 269
               D ++++    SG
Sbjct: 1444 NQNDSKNNENTNDSG 1488


>AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapiens},
           partial (2%)
          Length = 466

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 19/138 (13%)
 Frame = +1

Query: 135 SSSSKDADPKNGNSEGTNSEEPNQAPA-------------------SVQNISDDASDDVP 175
           SSSS  +   + +S  ++S+  ++APA                   S   +  D+  D  
Sbjct: 4   SSSSSSSSSSSSSSSDSDSDSESEAPAKKAVPVVTKTAPTHAKSASSKMEVDSDSDSDSD 183

Query: 176 LTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTE 235
            + S + S +    KK  VS+ + TP   ++S S   +  S  +S  S        + + 
Sbjct: 184 SSSSSSTSSSVSSVKKPAVSAAKATPAKKEESDSDSDSDSSSSSSSSSSSSSSSSSSSSS 363

Query: 236 KKKRKTPVDVEDSESDVE 253
                +  D E+ E + +
Sbjct: 364 SSSSSSNSDDEEEEEEAK 417



 Score = 36.2 bits (82), Expect = 0.039
 Identities = 27/114 (23%), Positives = 48/114 (41%), Gaps = 20/114 (17%)
 Frame = +1

Query: 80  NDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSS--- 136
           +D DS  ++P      VV     T +K +S++     DS S  +S  +++ + SVSS   
Sbjct: 52  SDSDSESEAPAKKAVPVVTKTAPTHAKSASSKMEVDSDSDSDSDSSSSSSTSSSVSSVKK 231

Query: 137 -----------------SSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDD 173
                            S  D+D  + +S  ++S   + + +S  + S   SDD
Sbjct: 232 PAVSAAKATPAKKEESDSDSDSDSSSSSSSSSSSSSSSSSSSSSSSSSSSNSDD 393


>TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
           partial (69%)
          Length = 1615

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 39/144 (27%), Positives = 53/144 (36%), Gaps = 4/144 (2%)
 Frame = +3

Query: 3   QSSGRKESVK--AKIERTAKGVKCMGLKSDPSQPSSVSKKASKKKRSRNPTCKVYKSQVK 60
           + S   E  K  +K    AK  K     SD     S S +  K   ++    +       
Sbjct: 186 EESDEDEDAKPVSKPAAVAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKEVSESESDSSD 365

Query: 61  NSKAPNVPILEDVPDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTS 120
           +    NV       DE E   ED P K+P   + DV  ++   G  G  A  TP   +T 
Sbjct: 366 DEDKMNVDKDGSDSDESEEESEDEPSKTPQKKIKDV--EMVDAGKSGKKAPNTP---ATP 530

Query: 121 HENSGDAT--TPNISVSSSSKDAD 142
            ENSG  T    N+S S    D +
Sbjct: 531 IENSGSKTLFVGNLSFSVQRSDIE 602



 Score = 36.6 bits (83), Expect = 0.030
 Identities = 38/168 (22%), Positives = 64/168 (37%), Gaps = 7/168 (4%)
 Frame = +3

Query: 108 SSAQETPGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNIS 167
           SS+ E   ++S   E++   + P      S KD+   +   + ++S+E  +  A+ + +S
Sbjct: 162 SSSDEESDEESDEDEDAKPVSKPAAVAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKEVS 341

Query: 168 D---DASDDVPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSK 224
           +   D+SDD    +   D   +   +    S  E + T  KK K   +      A    K
Sbjct: 342 ESESDSSDDE--DKMNVDKDGSDSDESEEESEDEPSKTPQKKIKDVEMV----DAGKSGK 503

Query: 225 GKQKEDKTPTEKKKRKT----PVDVEDSESDVEVGVQDIRSSDKKKFS 268
                  TP E    KT     +      SD+E   QD       +FS
Sbjct: 504 KAPNTPATPIENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFS 647


>TC81143 weakly similar to PIR|T08562|T08562 hypothetical protein T22F8.40 -
           Arabidopsis thaliana, partial (27%)
          Length = 988

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +2

Query: 147 NSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAARMKKKRRVSSPEVTPTSSKK 206
           +S+  N +  NQ    + N  DD  DD  + + F D       K+R+   P +  +SSK+
Sbjct: 362 DSKARNKKSRNQI---LDNEIDDDDDDSVVFDQFKD-------KRRQNKGPRMDSSSSKR 511

Query: 207 SKSSPITYKSRQASVKSKG-KQKEDKTPTEKK 237
           S S    + SR  S  SKG K   D  PT KK
Sbjct: 512 SSSGK-PFLSRHFSFGSKGSKSMLDNHPTRKK 604


>TC87846 similar to GP|5821151|dbj|BAA83717.1 RNA binding protein {Homo
           sapiens}, partial (2%)
          Length = 550

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 31/141 (21%), Positives = 57/141 (39%)
 Frame = +1

Query: 14  KIERTAKGVKCMGLKSDPSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDV 73
           K     K  K + L  DP  P++ S    +   ++ P  KV   Q ++S +         
Sbjct: 31  KFSMAPKPKKRLALVDDP--PTASSSDEEQPPSTQKPADKVVNEQDEDSSS--------- 177

Query: 74  PDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNIS 133
            +EEE ++ED              +  E    + +  Q+TP KDS     +   +TP  +
Sbjct: 178 -EEEEGDEEDG-------------SSSEDEEEEDNQTQQTPSKDSKPASKNPPPSTPISN 315

Query: 134 VSSSSKDADPKNGNSEGTNSE 154
              +  ++  ++G+  GT S+
Sbjct: 316 PKPAESESGSESGSESGTESD 378


>TC77056 similar to GP|15982817|gb|AAL09756.1 At2g20760/F5H14.27
           {Arabidopsis thaliana}, partial (43%)
          Length = 1228

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 30/132 (22%), Positives = 54/132 (40%)
 Frame = +1

Query: 31  PSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVPDEEEINDEDSPVKSPP 90
           P + +++ KK  KK + +NP+  V +   K  K  ++  +  +  + +       V  PP
Sbjct: 619 PREVANIEKKRGKKDQDKNPSVTVLQGP-KPGKPTDLSRMRQILLKLKHTPPLHMVPPPP 795

Query: 91  DVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEG 150
               D             S +   GK++ +  N G A  PN S    S ++ PK+  + G
Sbjct: 796 APAKD-------------SKEGKDGKETATKPN-GSAPKPNGSAPEVSPESQPKDAANNG 933

Query: 151 TNSEEPNQAPAS 162
           T      +AP +
Sbjct: 934 TADSPQKEAPTT 969


>TC79086 similar to GP|23499033|emb|CAD51113. ubiquitin-protein ligase 1
           putative {Plasmodium falciparum 3D7}, partial (0%)
          Length = 1418

 Score = 35.8 bits (81), Expect = 0.051
 Identities = 42/184 (22%), Positives = 68/184 (36%), Gaps = 5/184 (2%)
 Frame = +2

Query: 80  NDEDSPVKSPPDVVPDVVA----DVETTGSKGSSAQETPGKDSTSHENSGDATTPNISVS 135
           N   + VK  P    D +     + E T S+  S+ E   ++  S E     TTP    +
Sbjct: 56  NSATAAVKDDPPPQEDKIEQHDENDEETSSEAGSSSEGGEEEEESSEEEAPKTTPPPKTN 235

Query: 136 SSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAARMKKKRRVS 195
             +   + ++     T+ +EP   P   + I      +  L      S+A      +R +
Sbjct: 236 PKNNSVEDEDEEETDTDEDEP---PPKTKPI------EQTLKSGTKPSIAPARSGTKRPA 388

Query: 196 SPEVTPTSSKKSKSSPITYKSRQASVKSKGKQ-KEDKTPTEKKKRKTPVDVEDSESDVEV 254
               T  S+KK        K+ +   K K K+ +ED     KK     V  ED E  +  
Sbjct: 389 ENNDTKQSNKK--------KTTEEKNKKKEKEPEEDDNSNNKKASFQRVFTEDDEVAILQ 544

Query: 255 GVQD 258
           G+ D
Sbjct: 545 GLVD 556



 Score = 35.0 bits (79), Expect = 0.087
 Identities = 46/188 (24%), Positives = 72/188 (37%), Gaps = 25/188 (13%)
 Frame = +2

Query: 75  DEEEINDEDSPVKSPPDVVPDVVADVETTGSK--GSSAQETPGKDSTSHENSGDATTPNI 132
           +EEE ++E++P  +PP         VE    +   +   E P K     +     T P+I
Sbjct: 176 EEEESSEEEAPKTTPPPKTNPKNNSVEDEDEEETDTDEDEPPPKTKPIEQTLKSGTKPSI 355

Query: 133 SVSSS-----SKDADPKNGNSEGTNSE-------EP------NQAPASVQNISDDASDDV 174
           + + S     +++ D K  N + T  E       EP      N   AS Q +  +  D+V
Sbjct: 356 APARSGTKRPAENNDTKQSNKKKTTEEKNKKKEKEPEEDDNSNNKKASFQRVFTE-DDEV 532

Query: 175 PLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITY-----KSRQASVKSKGKQKE 229
            + +   D  A       +  S        KKS    +T      K R+  +K + K K 
Sbjct: 533 AILQGLVDFTAKSGNDPTKHLSAFYQIV--KKSVHFKVTLDQLRDKVRRLRLKYENKIKS 706

Query: 230 DKTPTEKK 237
            KTPT  K
Sbjct: 707 KKTPTFSK 730


>TC78700 similar to GP|21554835|gb|AAM63703.1 unknown {Arabidopsis
           thaliana}, partial (5%)
          Length = 687

 Score = 35.0 bits (79), Expect = 0.087
 Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 8/144 (5%)
 Frame = +2

Query: 136 SSSKDADPKNGNSEGTNSEEPNQAPASVQNI--------SDDASDDVPLTESFADSVAAR 187
           S+S  A  K    + T   +   AP+S+ N         +  A+D V L   F+D    +
Sbjct: 116 SNSSMAKKKQNEPQQTPQNDTVSAPSSIFNTLFANAPEQTTAAADTVSL---FSDDNPYK 286

Query: 188 MKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVED 247
            +K  +  SPE      KK K +       ++ V       E     EKKK+K     E+
Sbjct: 287 -RKPNQTLSPENGVVDEKKRKKN-----KEKSPVIDSNPIIEVSEKKEKKKKKKSGSGEE 448

Query: 248 SESDVEVGVQDIRSSDKKKFSGKR 271
            E + EV +      DKKK   KR
Sbjct: 449 EEKEKEVNLDGEGVGDKKKKKRKR 520


>TC79379 similar to GP|11994401|dbj|BAB02360. protein phosphatase 2A B'
           regulatory subunit {Arabidopsis thaliana}, partial (31%)
          Length = 930

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
 Frame = +1

Query: 91  DVVPDVVADVETTGSKGSSAQETPGKDS-------TSHENSGDATTPNISVSSSSKDADP 143
           D++  ++  +    SK SS  +  G          +S  +S D T    S S+SSK +  
Sbjct: 121 DMIKQILGKIPRKSSKSSSHSDFNGDGGLVNGGFGSSLNSSSDDTLK--SNSASSKSSSS 294

Query: 144 KNGNSEGTNSEEPNQAPASVQNI 166
            NG+S  TNS + NQA  S   I
Sbjct: 295 GNGSSASTNSNKTNQAKKSAPAI 363


>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
           partial (13%)
          Length = 663

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 40/191 (20%), Positives = 73/191 (37%), Gaps = 6/191 (3%)
 Frame = +3

Query: 122 ENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFA 181
           +++GD     + +    KD + K+   +    E+ ++      ++ D+  D         
Sbjct: 102 KSAGDVKEDKVEIE---KDLEIKSVEKDDEKKEKKDKEKKDKTDV-DEGKDK-------K 248

Query: 182 DSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKT 241
           D    + +KK      E      KK K      + ++   K KGK+ +DK   EKK +K 
Sbjct: 249 DKEKKKKEKKEENVKGEEEDGDEKKDK------EKKKKEKKEKGKEDKDKDGEEKKSKKD 410

Query: 242 PVDVEDSESDVEVGVQDIR------SSDKKKFSGKRVPQNVPAVPIDRVSFHLEENVQKW 295
               +D   D + G    +        +KKK   ++    V    ID     +EE  ++ 
Sbjct: 411 KEKKKDKNEDDDEGEDGSKKKKNKDKKEKKKEEDEKEEGKVSVRDID-----IEETAKEG 575

Query: 296 KFVCKRRMAKE 306
           K   K++  KE
Sbjct: 576 KEKKKKKEDKE 608


>TC87387 homologue to PIR|T47775|T47775 hypothetical protein F24I3.230 -
           Arabidopsis thaliana, partial (14%)
          Length = 1074

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
 Frame = +3

Query: 125 GDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSV 184
           GDA    ++ ++ ++D   +  + EG   ++ +      +   + A    P  +S    V
Sbjct: 144 GDAVIAGMAAATGTEDVKKEVADEEGEKVKK-DDGEGRKRKKHESADSPAPAKKSKVAEV 320

Query: 185 AARMK-KKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPV 243
               K K ++V    V     KK K      K ++   K  G    D+   EK+K+K   
Sbjct: 321 DGEEKVKTKKVDDAAVEVEDDKKEK------KKKKKKDKENGAAASDEEKVEKEKKKKHK 482

Query: 244 DV-EDSESDVE--------------VGVQDIRSSDKKK 266
           +  ED   +VE              VG  ++  S+KKK
Sbjct: 483 EKGEDGSPEVEKSDKKKKKHKETSEVGSPEVDKSEKKK 596


>TC78654 similar to GP|9758185|dbj|BAB08570.1
           gene_id:MTE17.25~pir||T07080~similar to unknown protein
           {Arabidopsis thaliana}, partial (51%)
          Length = 2008

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 40/153 (26%), Positives = 66/153 (42%), Gaps = 15/153 (9%)
 Frame = +2

Query: 114 PGKDSTSHENSGDATTPNISVSSSSKD-ADPKNGNSE--------GTNSEEP----NQAP 160
           PGK +T        T  +++      +  DPK  N +        G + EE     + A 
Sbjct: 833 PGKVATHVTQQDSETCESLARDLDKIEFPDPKIVNEDHLMVSEYFGISCEETQCSDSLAT 1012

Query: 161 ASVQNISDDASDDVPLTESFA--DSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQ 218
           +  +N S +A   V L ESF+     +  ++  +  S P    T+   S S+  + +S  
Sbjct: 1013SDAENHSSEAG--VRLVESFSACSGESVHVEPPKVESPPSSVSTNGVSSPSAHESSESSD 1186

Query: 219 ASVKSKGKQKEDKTPTEKKKRKTPVDVEDSESD 251
           A+  SK    E  + T++ K+   VDV+D ESD
Sbjct: 1187AAAASKSPSHEQVSGTKEVKK---VDVKDGESD 1276



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 35/146 (23%), Positives = 59/146 (39%), Gaps = 9/146 (6%)
 Frame = +2

Query: 77   EEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSS 136
            E ++ E   V+SPP       + V T G    SA E+  + S +   S   +   +S + 
Sbjct: 1082 ESVHVEPPKVESPP-------SSVSTNGVSSPSAHES-SESSDAAAASKSPSHEQVSGTK 1237

Query: 137  SSKDADPKNGNSEGTNSEEPNQAPASV--------QNISDDASD-DVPLTESFADSVAAR 187
              K  D K+G S+ ++    +  P  V        Q +  D  D  +   + F +S+ A+
Sbjct: 1238 EVKKVDVKDGESDSSSVVPSDLFPKPVVTVNMPEPQMVQQDIVDMYMKSMQQFTESL-AK 1414

Query: 188  MKKKRRVSSPEVTPTSSKKSKSSPIT 213
            MK    + S   T  +S   +  P T
Sbjct: 1415 MKLPMDIESEPTTSGNSSTEQKLPQT 1492


>BM779021 homologue to PIR|T05883|T058 ATP-dependent helicase F6H11.20 -
           Arabidopsis thaliana, partial (9%)
          Length = 492

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 26/88 (29%), Positives = 38/88 (42%), Gaps = 7/88 (7%)
 Frame = +3

Query: 29  SDPSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVPDEEEINDEDS---- 84
           S  +Q +   KK +KK R R  + K+ +   K  K  N    E   +EEE ND+D     
Sbjct: 27  SPENQINDSYKKKNKKLRKRKRSRKLEQELEKQQKEKNNENTESEDEEEENNDKDGNDVV 206

Query: 85  ---PVKSPPDVVPDVVADVETTGSKGSS 109
                K   +V+P  +   E+  S G S
Sbjct: 207 EEVEEKKVENVLPSGILSTESFSSLGLS 290


>TC77549 similar to GP|21592984|gb|AAM64933.1 photolyase/blue-light receptor
           PHR2 {Arabidopsis thaliana}, partial (72%)
          Length = 1653

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 52/227 (22%), Positives = 83/227 (35%), Gaps = 10/227 (4%)
 Frame = +1

Query: 31  PSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVPDEEEINDEDSPVKSPP 90
           P+Q SS++  +   K   +P+ K +K   K+S + N                  P+KSP 
Sbjct: 214 PTQASSLTHLSLSTKTHSSPSNKTFK---KSSFSSN------------------PLKSPL 330

Query: 91  DVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSSSSK---DADPKNGN 147
            ++P    D  +  +   +A      D   H+N    T  N S+S       D      +
Sbjct: 331 SLIPHRPNDPSSAAALRRTAIVWFRNDLRVHDNEALNTANNESISVLPVYCFDPADYGKS 510

Query: 148 SEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAARMKKKRRVSSPEVTPTSSKKS 207
           S G +   P +A   ++++SD   +   L    +D V        RV  PE       K 
Sbjct: 511 SSGFDKTGPYRASFLIESVSDLRKN---LKARGSDLVV-------RVGKPETVLVELAKE 660

Query: 208 KSSPITYKSRQAS-------VKSKGKQKEDKTPTEKKKRKTPVDVED 247
             +   Y  R+ S        K +GK KE+    +     T   VED
Sbjct: 661 IGADAVYCHREVSHDEVKMEEKIEGKMKEENVEVKYFWGSTLYHVED 801


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.308    0.126    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,086,062
Number of Sequences: 36976
Number of extensions: 178637
Number of successful extensions: 1237
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of query: 629
length of database: 9,014,727
effective HSP length: 102
effective length of query: 527
effective length of database: 5,243,175
effective search space: 2763153225
effective search space used: 2763153225
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)