BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0090a.1
(150 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ151059 similar to GP|7291525|gb|A CG9888-PA {Drosophila melano... 86 6e-18
TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear prot... 74 2e-14
BM814132 weakly similar to OMNI|MT3615.1 PE_PGRS family protein ... 73 4e-14
AL372330 similar to GP|21322752|dbj cold shock protein-1 {Tritic... 65 8e-12
TC76561 similar to PIR|S71779|S71779 glycine-rich RNA-binding pr... 65 1e-11
TC76557 similar to PIR|S71779|S71779 glycine-rich RNA-binding pr... 65 1e-11
TC76556 similar to PIR|S71779|S71779 glycine-rich RNA-binding pr... 65 1e-11
TC87201 similar to PIR|F86388|F86388 hypothetical protein AAG292... 61 1e-10
TC89001 similar to GP|5726567|gb|AAD48471.1| glycine-rich RNA-bi... 61 2e-10
BM814143 GP|21322711|e pherophorin-dz1 protein {Volvox carteri f... 61 2e-10
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 60 3e-10
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 60 3e-10
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 59 6e-10
TC87476 homologue to PIR|T11622|T11622 extensin class 1 precurso... 59 7e-10
BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like ... 59 1e-09
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 58 2e-09
TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 57 2e-09
TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 57 3e-09
BM814145 homologue to GP|21322711|em pherophorin-dz1 protein {Vo... 57 4e-09
TC76706 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulat... 56 5e-09
>BQ151059 similar to GP|7291525|gb|A CG9888-PA {Drosophila melanogaster},
partial (26%)
Length = 308
Score = 85.9 bits (211), Expect = 6e-18
Identities = 47/102 (46%), Positives = 48/102 (46%)
Frame = +1
Query: 45 RRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDD 104
R + RG GG GGGGGG GGG GG G G G G G G GGGGGG GG G G G
Sbjct: 22 RGKPRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 201
Query: 105 GGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GGGG G GG GGG GG G G
Sbjct: 202 GGGGGGGGGG---------------------GGGGGGGGGGG 264
Score = 84.3 bits (207), Expect = 2e-17
Identities = 44/86 (51%), Positives = 44/86 (51%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG GG G G GG GGGGGG GGG GG G G G G G G GG
Sbjct: 49 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 228
Query: 88 GGGGLGGDIGSGSDGDDGGGGSGSGG 113
GGGG GG G G G GGGG G GG
Sbjct: 229 GGGGGGGGGGGGGGGGGGGGGGGGGG 306
Score = 84.3 bits (207), Expect = 2e-17
Identities = 44/86 (51%), Positives = 44/86 (51%)
Frame = +3
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG GG G G GG GGGGGG GGG GG G G G G G G GG
Sbjct: 45 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 224
Query: 88 GGGGLGGDIGSGSDGDDGGGGSGSGG 113
GGGG GG G G G GGGG G GG
Sbjct: 225 GGGGGGGGGGGGGGGGGGGGGGGGGG 302
Score = 84.3 bits (207), Expect = 2e-17
Identities = 47/104 (45%), Positives = 48/104 (45%)
Frame = +1
Query: 43 GRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDG 102
G+ R G GG GGGGGG GGG GG G G G G G G GGGGGG GG G G G
Sbjct: 25 GKPRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 204
Query: 103 DDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GGGG G GG GGG GG G G
Sbjct: 205 GGGGGGGGGGGG---------------------GGGGGGGGGGG 273
Score = 83.6 bits (205), Expect = 3e-17
Identities = 50/119 (42%), Positives = 50/119 (42%)
Frame = +2
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG GG G GG GGGGGG GGG GG G G G G G G GG
Sbjct: 44 GGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 190
Query: 88 GGGGLGGDIGSGSDGDDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GGGG GG G G G GGGG G GG GGG GG G G
Sbjct: 191 GGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------GGGGGGGGGGG 304
Score = 83.6 bits (205), Expect = 3e-17
Identities = 50/119 (42%), Positives = 50/119 (42%)
Frame = +3
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG GG G GG GGGGGG GGG GG G G G G G G GG
Sbjct: 39 GGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 185
Query: 88 GGGGLGGDIGSGSDGDDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GGGG GG G G G GGGG G GG GGG GG G G
Sbjct: 186 GGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------GGGGGGGGGGG 299
Score = 83.2 bits (204), Expect = 4e-17
Identities = 46/103 (44%), Positives = 48/103 (45%)
Frame = +1
Query: 44 RRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGD 103
R + + G GG GGGGGG GGG GG G G G G G G GGGGGG GG G G G
Sbjct: 22 RGKPRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 201
Query: 104 DGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GGGG G GG GGG GG G G
Sbjct: 202 GGGGGGGGGGG---------------------GGGGGGGGGGG 267
Score = 80.1 bits (196), Expect = 3e-16
Identities = 43/94 (45%), Positives = 45/94 (47%)
Frame = +2
Query: 53 NGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSG 112
+G + GGGGGG GGG GG G G G G G G GGGGGG GG G G G GGGG G G
Sbjct: 20 SGENPGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 199
Query: 113 GSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
G GGG GG G G
Sbjct: 200 GG---------------------GGGGGGGGGGG 238
Score = 79.3 bits (194), Expect = 5e-16
Identities = 45/100 (45%), Positives = 45/100 (45%)
Frame = +3
Query: 47 RQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGG 106
RQ G GGGGGG GGG GG G G G G G G GGGGGG GG G G G GG
Sbjct: 3 RQLSPFPGKTPGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 182
Query: 107 GGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GG G GG GGG GG G G
Sbjct: 183 GGGGGGGG---------------------GGGGGGGGGGG 239
>TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear protein.
[strain B95-8 Human herpesvirus 4] {Epstein-barr
virus}, partial (23%)
Length = 431
Score = 73.9 bits (180), Expect = 2e-14
Identities = 42/95 (44%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGG-GGGLGGDIGSGSDGDDGGGGSGSG 112
G D GGG GG GG GG G G+ G G G GSGGG GGG GG G G G GG G G
Sbjct: 1 GRDHGGGYGGGGGSGGGGGGGAGGAHGVGYGSGGGTGGGYGGGSPGGGGGGGGSGGGGGG 180
Query: 113 GSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRGH 147
G GGG GG +G GH
Sbjct: 181 GG---------------AHGGAYGGGIGGGEGGGH 240
Score = 58.9 bits (141), Expect = 7e-10
Identities = 34/79 (43%), Positives = 35/79 (44%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG GG + G GV G G GGG GG GG G G G G G G G
Sbjct: 13 GGGYGGGGGSGGGGGGGAGGAHGVGYGSGGGTGGGYGGGSPGGGG-GGGGSGGGGGGGGA 189
Query: 88 GGGGLGGDIGSGSDGDDGG 106
GG GG IG G G GG
Sbjct: 190 HGGAYGGGIGGGEGGGHGG 246
Score = 51.6 bits (122), Expect = 1e-07
Identities = 34/83 (40%), Positives = 36/83 (42%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG GG + G G GG GG GG GGG GG G G GG
Sbjct: 52 GGGGAGGAHGVGYGSG------GGTGGGYGGGSPGGGGGG-GGSG-----------GGGG 177
Query: 88 GGGGLGGDIGSGSDGDDGGGGSG 110
GGG GG G G G +GGG G
Sbjct: 178 GGGAHGGAYGGGIGGGEGGGHGG 246
Score = 27.3 bits (59), Expect = 2.4
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +1
Query: 102 GDDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRGHDS 149
G GGGGSG GG GGG GG+ G G+ S
Sbjct: 19 GYGGGGGSGGGG----------------------GGGAGGAHGVGYGS 96
>BM814132 weakly similar to OMNI|MT3615.1 PE_PGRS family protein
{Mycobacterium tuberculosis CDC1551}, partial (7%)
Length = 164
Score = 73.2 bits (178), Expect = 4e-14
Identities = 35/56 (62%), Positives = 35/56 (62%)
Frame = +1
Query: 58 GGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GGGGGG GGG GG G G G G G G GGGGGG GG G G G GGGG G GG
Sbjct: 1 GGGGGGGGGGGGGGGGGGGG--GRGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGG 162
Score = 72.0 bits (175), Expect = 8e-14
Identities = 35/60 (58%), Positives = 35/60 (58%)
Frame = +3
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GG GGGGGG GGG GG G G G G G G GGGGGG GG G GGGG G GG
Sbjct: 6 GGRGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGG 164
Score = 72.0 bits (175), Expect = 8e-14
Identities = 35/60 (58%), Positives = 35/60 (58%)
Frame = +2
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GG GGGGGG GGG GG G G G G GGGGGG GG G G G GGGG G GG
Sbjct: 2 GGGAGGGGGGGGGGGGGGGGGGGG------GGGGGGGGRGGGGGGGGGGGGGGGGGGGGG 163
Score = 63.2 bits (152), Expect = 4e-11
Identities = 30/51 (58%), Positives = 30/51 (58%)
Frame = +3
Query: 49 RGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSG 99
RG GG GGGGGG G G GG G G G G G G GGGGGG GG G G
Sbjct: 12 RGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 164
Score = 62.0 bits (149), Expect = 9e-11
Identities = 30/51 (58%), Positives = 31/51 (59%)
Frame = +3
Query: 47 RQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIG 97
R G GG GGGGGG+GGG GG G G G G G G GGGGGG GG G
Sbjct: 12 RGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 164
Score = 59.7 bits (143), Expect = 4e-10
Identities = 32/66 (48%), Positives = 32/66 (48%)
Frame = +3
Query: 29 GGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGG 88
GG RGG G GG GGG GG GGG GG G G G G G G GGG
Sbjct: 3 GGGRGGGGG------------GGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 146
Query: 89 GGGLGG 94
GGG GG
Sbjct: 147GGGGGG 164
Score = 48.1 bits (113), Expect = 1e-06
Identities = 29/67 (43%), Positives = 29/67 (43%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG GG G RG GG GG GGG GGG GG G GG
Sbjct: 1 GGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGAGGGGGGGGGG-------------GGGG 141
Query: 88 GGGGLGG 94
GGGG GG
Sbjct: 142GGGGGGG 162
Score = 46.6 bits (109), Expect = 4e-06
Identities = 27/65 (41%), Positives = 28/65 (42%)
Frame = +1
Query: 82 GCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGG 141
G G GGGGGG GG G G G GGGG G GG+ GGG GG
Sbjct: 1 GGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGA---------------------GGGGGG 117
Query: 142 SDGRG 146
G G
Sbjct: 118 GGGGG 132
>AL372330 similar to GP|21322752|dbj cold shock protein-1 {Triticum
aestivum}, partial (33%)
Length = 435
Score = 65.5 bits (158), Expect = 8e-12
Identities = 37/85 (43%), Positives = 38/85 (44%)
Frame = +2
Query: 29 GGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGG 88
GG G +S GG GG GG GG SGG G S G G G G G
Sbjct: 23 GGYGGSSSGGYGGSSSSSYPASSSGGGYGGGSSGGYGGSSGGYGGSSGGYGGGGYGGGAS 202
Query: 89 GGGLGGDIGSGSDGDDGGGGSGSGG 113
GG GG G GS G GGGG G GG
Sbjct: 203 GGYGGGGYGGGSGGGYGGGGYGGGG 277
Score = 63.2 bits (152), Expect = 4e-11
Identities = 40/87 (45%), Positives = 42/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGG-GSGGDGVGSDGDDGDGCGSG 86
GGG GG+S GG GG GG SGG G GG G G+ G G G G
Sbjct: 95 GGGYGGGSSGGY--------------GGSSGGYGGSSGGYGGGGYGGGASGGYGGGGYGG 232
Query: 87 GGGGGLGGDIGSGSDGDDGGGGSGSGG 113
G GGG GG G G G GGGG G GG
Sbjct: 233 GSGGGYGGG-GYGGGGYGGGGGGGYGG 310
Score = 61.2 bits (147), Expect = 1e-10
Identities = 36/85 (42%), Positives = 41/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 30 GCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGG-DGVGSDGDDGDGCGSGGG 88
G GG+S++ + G + G GG GG GG SGG G G G G G GG
Sbjct: 47 GGYGGSSSSSYPASSSGGGYGGGSSGGYGGSSGGYGGSSGGYGGGGYGGGASGGYGGGGY 226
Query: 89 GGGLGGDIGSGSDGDDGGGGSGSGG 113
GGG GG G G G G GG G GG
Sbjct: 227 GGGSGGGYGGGGYGGGGYGGGGGGG 301
Score = 55.1 bits (131), Expect = 1e-08
Identities = 37/99 (37%), Positives = 39/99 (39%)
Frame = +2
Query: 49 RGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGG 108
R +GG G GG GG S S G G GS GG GG G G GS G GGGG
Sbjct: 8 RSSSSGGYGGSSSGGYGGSSSSSYPASSSGGGYGGGSSGGYGGSSGGYG-GSSGGYGGGG 184
Query: 109 SGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRGH 147
G G S GGG GG G G+
Sbjct: 185 YGGGAS-----------------GGYGGGGYGGGSGGGY 250
Score = 52.0 bits (123), Expect = 9e-08
Identities = 35/73 (47%), Positives = 36/73 (48%), Gaps = 5/73 (6%)
Frame = +2
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGG-----GGGGSGGGSGGDGVGSDGDDGDG 82
GGG GG + G G GG GG GGGG GGGSGG G G G G G
Sbjct: 107 GGGSSGGYGGSSGGYGGS--SGGYGGGGYGGGASGGYGGGGYGGGSGG-GYGGGGYGGGG 277
Query: 83 CGSGGGGGGLGGD 95
G GGGGG GGD
Sbjct: 278 YGG-GGGGGYGGD 313
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/58 (39%), Positives = 28/58 (47%)
Frame = +2
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGS 85
GGG GG ++ + G G +GG GGGG G GG GG G G GD G+
Sbjct: 173 GGGGYGGGASGGYGGGGY----GGGSGGGYGGGGYGGGGYGGGGGGGYGGDKMGALGA 334
>TC76561 similar to PIR|S71779|S71779 glycine-rich RNA-binding protein GRP1
- wheat, partial (95%)
Length = 1054
Score = 64.7 bits (156), Expect = 1e-11
Identities = 34/67 (50%), Positives = 35/67 (51%)
Frame = +1
Query: 47 RQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGG 106
+ RG GG G GGGG GGG GG G G G G GGGGGG G G G GG
Sbjct: 586 QSRGSGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGGGGGGGYGERRGGGGGYSRGG 765
Query: 107 GGSGSGG 113
GG G GG
Sbjct: 766 GGGGYGG 786
Score = 55.1 bits (131), Expect = 1e-08
Identities = 36/79 (45%), Positives = 37/79 (46%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG RGG G +RG GGGGG GGG GG G G G G GG
Sbjct: 610 GGGGRGGGGYGGGGGGYGGERRGY-------GGGGGYGGGGGG-GYGERRGGGGGYSRGG 765
Query: 88 GGGGLGGDIGSGSDGDDGG 106
GGGG GG G G DGG
Sbjct: 766 GGGGYGGG-GYSRGGGDGG 819
Score = 53.1 bits (126), Expect = 4e-08
Identities = 33/81 (40%), Positives = 40/81 (48%), Gaps = 6/81 (7%)
Frame = +1
Query: 50 GVENGGDDGGGGGGSGG------GSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGD 103
G GG GGGGGG GG G GG G G G G+ G GGG GG G G G
Sbjct: 616 GGRGGGGYGGGGGGYGGERRGYGGGGGYGGGGGGGYGERRGGGGGYSRGGGGGGYGGGGY 795
Query: 104 DGGGGSGSGGSTVEVMLMMVV 124
GGG G G +++ M+++
Sbjct: 796 SRGGGDG-GY*VLDLSFMIII 855
Score = 34.7 bits (78), Expect = 0.015
Identities = 23/54 (42%), Positives = 24/54 (43%), Gaps = 7/54 (12%)
Frame = +1
Query: 67 GSGGDGVGSDGDDGDGCGSGGGGGG--LGGDIGSGSDGDDG-----GGGSGSGG 113
G DG + GSGGGGGG GG G G G G GGG G GG
Sbjct: 544 GQDLDGRNITVNQAQSRGSGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGG 705
>TC76557 similar to PIR|S71779|S71779 glycine-rich RNA-binding protein GRP1
- wheat, partial (95%)
Length = 912
Score = 64.7 bits (156), Expect = 1e-11
Identities = 34/67 (50%), Positives = 35/67 (51%)
Frame = +1
Query: 47 RQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGG 106
+ RG GG G GGGG GGG GG G G G G GGGGGG G G G GG
Sbjct: 490 QSRGSGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGGGGGGGYGERRGGGGGYSRGG 669
Query: 107 GGSGSGG 113
GG G GG
Sbjct: 670 GGGGYGG 690
Score = 55.1 bits (131), Expect = 1e-08
Identities = 36/79 (45%), Positives = 37/79 (46%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG RGG G +RG GGGGG GGG GG G G G G GG
Sbjct: 514 GGGGRGGGGYGGGGGGYGGERRGY-------GGGGGYGGGGGG-GYGERRGGGGGYSRGG 669
Query: 88 GGGGLGGDIGSGSDGDDGG 106
GGGG GG G G DGG
Sbjct: 670 GGGGYGGG-GYSRGGGDGG 723
Score = 53.1 bits (126), Expect = 4e-08
Identities = 33/81 (40%), Positives = 40/81 (48%), Gaps = 6/81 (7%)
Frame = +1
Query: 50 GVENGGDDGGGGGGSGG------GSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGD 103
G GG GGGGGG GG G GG G G G G+ G GGG GG G G G
Sbjct: 520 GGRGGGGYGGGGGGYGGERRGYGGGGGYGGGGGGGYGERRGGGGGYSRGGGGGGYGGGGY 699
Query: 104 DGGGGSGSGGSTVEVMLMMVV 124
GGG G G +++ M+++
Sbjct: 700 SRGGGDG-GY*VLDLSFMIII 759
Score = 34.7 bits (78), Expect = 0.015
Identities = 23/54 (42%), Positives = 24/54 (43%), Gaps = 7/54 (12%)
Frame = +1
Query: 67 GSGGDGVGSDGDDGDGCGSGGGGGG--LGGDIGSGSDGDDG-----GGGSGSGG 113
G DG + GSGGGGGG GG G G G G GGG G GG
Sbjct: 448 GQDLDGRNITVNQAQSRGSGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGG 609
>TC76556 similar to PIR|S71779|S71779 glycine-rich RNA-binding protein GRP1
- wheat, partial (95%)
Length = 754
Score = 64.7 bits (156), Expect = 1e-11
Identities = 34/67 (50%), Positives = 35/67 (51%)
Frame = +2
Query: 47 RQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGG 106
+ RG GG G GGGG GGG GG G G G G GGGGGG G G G GG
Sbjct: 332 QSRGSGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGGGGGGGYGERRGGGGGYSRGG 511
Query: 107 GGSGSGG 113
GG G GG
Sbjct: 512 GGGGYGG 532
Score = 55.1 bits (131), Expect = 1e-08
Identities = 36/79 (45%), Positives = 37/79 (46%)
Frame = +2
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG RGG G +RG GGGGG GGG GG G G G G GG
Sbjct: 356 GGGGRGGGGYGGGGGGYGGERRGY-------GGGGGYGGGGGG-GYGERRGGGGGYSRGG 511
Query: 88 GGGGLGGDIGSGSDGDDGG 106
GGGG GG G G DGG
Sbjct: 512 GGGGYGGG-GYSRGGGDGG 565
Score = 53.1 bits (126), Expect = 4e-08
Identities = 33/81 (40%), Positives = 40/81 (48%), Gaps = 6/81 (7%)
Frame = +2
Query: 50 GVENGGDDGGGGGGSGG------GSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGD 103
G GG GGGGGG GG G GG G G G G+ G GGG GG G G G
Sbjct: 362 GGRGGGGYGGGGGGYGGERRGYGGGGGYGGGGGGGYGERRGGGGGYSRGGGGGGYGGGGY 541
Query: 104 DGGGGSGSGGSTVEVMLMMVV 124
GGG G G +++ M+++
Sbjct: 542 SRGGGDG-GY*VLDLSFMIII 601
Score = 34.7 bits (78), Expect = 0.015
Identities = 23/54 (42%), Positives = 24/54 (43%), Gaps = 7/54 (12%)
Frame = +2
Query: 67 GSGGDGVGSDGDDGDGCGSGGGGGG--LGGDIGSGSDGDDG-----GGGSGSGG 113
G DG + GSGGGGGG GG G G G G GGG G GG
Sbjct: 290 GQDLDGRNITVNQAQSRGSGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGG 451
>TC87201 similar to PIR|F86388|F86388 hypothetical protein AAG29221.1
[imported] - Arabidopsis thaliana, partial (41%)
Length = 991
Score = 61.2 bits (147), Expect = 1e-10
Identities = 46/110 (41%), Positives = 51/110 (45%), Gaps = 22/110 (20%)
Frame = -3
Query: 54 GGDDGGGGGG----------SGGGSGGD----GVGSDGDDGDGCGSGGGGGGL------G 93
GG DG GGGG + GG GGD G G DG GDG GGGGG L G
Sbjct: 350 GGGDGDGGGGDL*TYGGGVYTYGGGGGDL*IYGGGGDGGGGDG*T*GGGGGDLYTYGGGG 171
Query: 94 GDIGSGSDGDDGGGGSG--SGGSTVEVMLMMVVAVRVVVAATVEGGGCGG 141
GD+ G DGGGG G GG+ RVV+ + GGG GG
Sbjct: 170 GDL*IYGGGGDGGGGDG*T*GGA------------RVVICIRIGGGGDGG 57
Score = 53.1 bits (126), Expect = 4e-08
Identities = 45/113 (39%), Positives = 47/113 (40%), Gaps = 18/113 (15%)
Frame = -3
Query: 54 GGDDGGGGGGSG---GGSGGDGVGSDGDDGDGCGSGGGGGGL------GGDI---GSGSD 101
GG DG GGGG GG GGD G GD GGGGG L GGD+ G G D
Sbjct: 518 GGGDGEGGGGDS*T*GGGGGDL*TYCGGGGDS*TYGGGGGDL*TYGGGGGDLYTYGGGGD 339
Query: 102 GDDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGG------CGGSDGRGHD 148
GD GGG + G V T GGG GG DG G D
Sbjct: 338 GDGGGGDL*TYGGGV---------------YTYGGGGGDL*IYGGGGDGGGGD 225
Score = 47.4 bits (111), Expect = 2e-06
Identities = 32/71 (45%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = -3
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGD--------------IGSG 99
GGD GGG G + GG GGD G GD GGGG G GGD IG G
Sbjct: 248 GGDGGGGDG*T*GGGGGDLYTYGGGGGDL*IYGGGGDGGGGDG*T*GGARVVICIRIGGG 69
Query: 100 SDGDDGGGGSG 110
DGGGG G
Sbjct: 68 G---DGGGGDG 45
Score = 41.2 bits (95), Expect = 2e-04
Identities = 28/60 (46%), Positives = 29/60 (47%), Gaps = 3/60 (5%)
Frame = -3
Query: 54 GGDDGGGGGGSG---GGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSG 110
GGD GGG G G GGDG +G GD GGGGG L G G D GGG G
Sbjct: 569 GGDS*TYGGGIGL**YGGGGDG---EGGGGDS*T*GGGGGDL*TYCGGGGDS*TYGGGGG 399
>TC89001 similar to GP|5726567|gb|AAD48471.1| glycine-rich RNA-binding
protein {Glycine max}, partial (90%)
Length = 488
Score = 60.8 bits (146), Expect = 2e-10
Identities = 41/87 (47%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG 87
GGG RGG GG GGGGG GGG GG G G DG SGG
Sbjct: 297 GGGGRGG-------------------GGGGYGGGGGYGGGGGGYGGGGGRRDGGYSRSGG 419
Query: 88 GGG-GLGGDIGSGSDGDDGGGGSGSGG 113
GGG G GGD G G GGGG G GG
Sbjct: 420 GGGYGGGGDRGYG-----GGGGGGYGG 485
Score = 56.6 bits (135), Expect = 4e-09
Identities = 30/61 (49%), Positives = 31/61 (50%)
Frame = +3
Query: 53 NGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSG 112
+GG GGGGG GG GG G G G G G GG GG G G GD G GG G G
Sbjct: 294 SGGGGRGGGGGGYGGGGGYGGGGGGYGGGGGRRDGGYSRSGGGGGYGGGGDRGYGGGGGG 473
Query: 113 G 113
G
Sbjct: 474 G 476
Score = 41.2 bits (95), Expect = 2e-04
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 67 GSGGDGVGSDGDDGDGCGSGGGG-GGLGGDIGSGSDGDDGGGGSGSGGSTVEVMLMMVVA 125
G DG ++ GSGGGG GG GG G G GGGG G GG +
Sbjct: 240 GQDIDGRNITVNEAQSRGSGGGGRGGGGGGYGGGGGYGGGGGGYGGGGGRRD-------- 395
Query: 126 VRVVVAATVEGGGCGGSDGRGH 147
+ + GGG GG RG+
Sbjct: 396 --GGYSRSGGGGGYGGGGDRGY 455
Score = 37.4 bits (85), Expect = 0.002
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +3
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGG 70
GGG GG + R G GGD G GGGG GG GG
Sbjct: 360 GGGYGGGGGRRDGGYSRSGGGGGYGGGGDRGYGGGGGGGYGGG 488
>BM814143 GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
nagariensis}, partial (4%)
Length = 132
Score = 60.8 bits (146), Expect = 2e-10
Identities = 28/44 (63%), Positives = 28/44 (63%)
Frame = +1
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIG 97
GG GGGGGG GGG GG G G G G G G GGGGGG GG G
Sbjct: 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 132
Score = 60.5 bits (145), Expect = 3e-10
Identities = 30/56 (53%), Positives = 30/56 (53%)
Frame = +2
Query: 58 GGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GGGGGG GGG GG G G G G G G GGGGGG GGGG G GG
Sbjct: 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------GGGGGGGGG 130
Score = 60.5 bits (145), Expect = 3e-10
Identities = 30/51 (58%), Positives = 30/51 (58%)
Frame = +1
Query: 58 GGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGG 108
GGGGGG GGG GG G G G G GGGGGG GG G G G GGGG
Sbjct: 1 GGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGG 132
Score = 60.5 bits (145), Expect = 3e-10
Identities = 30/55 (54%), Positives = 30/55 (54%)
Frame = +1
Query: 59 GGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GGGGG GGG GG G G GGGGGG GG G G G GGGG G GG
Sbjct: 1 GGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 132
Score = 58.5 bits (140), Expect = 1e-09
Identities = 27/44 (61%), Positives = 27/44 (61%)
Frame = +1
Query: 50 GVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLG 93
G GG GGGGGG GGG GG G G G G G G GGGGGG G
Sbjct: 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 132
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 60.1 bits (144), Expect = 3e-10
Identities = 38/93 (40%), Positives = 43/93 (45%), Gaps = 6/93 (6%)
Frame = -1
Query: 27 EGGGCRGGNSNAEWWLGRRRRQRGVENGGD------DGGGGGGSGGGSGGDGVGSDGDDG 80
E GG GG + G GV GGD DGG G GG GG+ G DG
Sbjct: 316 EDGGEGGGGVLEDGGDGLSSELGGVREGGDGVVPPPDGGDIAGVVGGEGGEFEGVDGGGA 137
Query: 81 DGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
DG GGG G+ G G G+DG GGG +G G
Sbjct: 136 DGVVDGGGDEGVAGVEGGGADGVTGGGFAGVDG 38
Score = 50.1 bits (118), Expect = 3e-07
Identities = 44/109 (40%), Positives = 48/109 (43%), Gaps = 8/109 (7%)
Frame = -1
Query: 50 GVENGG---DDGGGGGGS---GGGSGGDGVGSDGDDGDGCG-SGGGGGGLGGDIGSGSDG 102
G E GG +DGG G S G GGDGV D GD G GG GG G G G+DG
Sbjct: 310 GGEGGGGVLEDGGDGLSSELGGVREGGDGVVPPPDGGDIAGVVGGEGGEFEGVDGGGADG 131
Query: 103 -DDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRGHDSM 150
DGGG G V V A V GGG G DG G + +
Sbjct: 130 VVDGGGDEG------------VAGVEGGGADGVTGGGFAGVDGGGDEGV 20
Score = 28.9 bits (63), Expect = 0.82
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Frame = -1
Query: 79 DGDGCGSGG-----GGGGLGGDIGSGSDGDDGGGGSGSGGSTVEVMLMMVVAVRVVVAAT 133
D DG GG GG GL ++G +G DG GG V+
Sbjct: 319 DEDGGEGGGGVLEDGGDGLSSELGGVREGGDGVVPPPDGGDIAGVV-------------G 179
Query: 134 VEGGGCGGSDGRGHDSM 150
EGG G DG G D +
Sbjct: 178 GEGGEFEGVDGGGADGV 128
Score = 28.1 bits (61), Expect = 1.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 85 SGGGGGGLGGDIGSGSDGDDGGG 107
+GGGGGG D G G G GGG
Sbjct: 631 AGGGGGGAT*DGGRGGIGAGGGG 563
Score = 27.7 bits (60), Expect = 1.8
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 58 GGGGGGS--GGGSGGDGVGSDG 77
GGGGGG+ GG GG G G G
Sbjct: 628 GGGGGGAT*DGGRGGIGAGGGG 563
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 60.1 bits (144), Expect = 3e-10
Identities = 41/100 (41%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Frame = -1
Query: 27 EGGGCRGGNSNAEWWLGRRRRQRGVENGGDD--GGGGGGSGGGSGGD------GVGSDGD 78
+GGG GG S Q G + GG + GGGG +GGG GGD GVG G
Sbjct: 324 QGGGGGGGGST----------QGGGDGGGGE*TGGGGECTGGGGGGDKYGYTGGVGE*GG 175
Query: 79 DGDGCGSGGG--GGGLGGDI---GSGSDGDDGGGGSGSGG 113
G G GGG GG GG++ G+G G++ G G G GG
Sbjct: 174 GGGEXGGGGGE*AGGGGGEL***GTGGGGENTGAGGGGGG 55
Score = 58.9 bits (141), Expect = 7e-10
Identities = 34/66 (51%), Positives = 37/66 (55%), Gaps = 7/66 (10%)
Frame = -1
Query: 55 GDDGGGGGGSGGGSGGDGV---GSDGDDGDGCGSGG---GGGGLGGDIG-SGSDGDDGGG 107
GDDGGGG GGG GG G G DG G+ G GG GGGG G G +G G+ GGG
Sbjct: 351 GDDGGGGSTQGGGGGGGGSTQGGGDGGGGE*TGGGGECTGGGGGGDKYGYTGGVGE*GGG 172
Query: 108 GSGSGG 113
G GG
Sbjct: 171 GGEXGG 154
Score = 55.5 bits (132), Expect = 8e-09
Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = -1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDD-------G 80
GG C GG + + G G + GGGGG GG GG+ G G + G
Sbjct: 249 GGECTGGGGGGDKY--------GYTGGVGE*GGGGGEXGGGGGE*AGGGGGEL***GTGG 94
Query: 81 DGCGSGGGGGGLGGDIGSGSDGD 103
G +G GGGG GG+ G G GD
Sbjct: 93 GGENTGAGGGGGGGEFGGGGGGD 25
Score = 55.1 bits (131), Expect = 1e-08
Identities = 35/74 (47%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Frame = -1
Query: 54 GGDDGGGGGGSGGGSGGDG-----VGSDGDD----GDGCGSGGGGGGLGGDIGSGSDGDD 104
GGD+ GGGG G GDG G G+ GDG G G GGG G G+G DG
Sbjct: 513 GGDEYTGGGGEGYAYTGDGGGEVYTGGGGEG*AYTGDGGGDGDGGG**GV*CGAGDDGGG 334
Query: 105 G---GGGSGSGGST 115
G GGG G GGST
Sbjct: 333 GSTQGGGGGGGGST 292
Score = 54.3 bits (129), Expect = 2e-08
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Frame = -1
Query: 54 GGDDGGGGGGSGGGS--GGDGVGSDGDDGDG-CGSGGGGG---GLGGDIG--SGSDGDDG 105
GG GGGGG GG + GGDG G + G G C GGGGG G G +G G G+ G
Sbjct: 336 GGSTQGGGGGGGGSTQGGGDGGGGE*TGGGGECTGGGGGGDKYGYTGGVGE*GGGGGEXG 157
Query: 106 GGG---SGSGG 113
GGG +G GG
Sbjct: 156 GGGGE*AGGGG 124
Score = 52.8 bits (125), Expect = 5e-08
Identities = 40/99 (40%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Frame = -1
Query: 28 GGGCRG----GNSNAEWWLGRRRRQRGVENGGDDG----GGGGGSGGGSGGDGV-GSDGD 78
GGG G G+ E + G GG +G G GGG G G G GV GD
Sbjct: 495 GGGGEGYAYTGDGGGEVYTG----------GGGEG*AYTGDGGGDGDGGG**GV*CGAGD 346
Query: 79 DGDGCGSGGGGGGLGGDIGSGSDGD----DGGGGSGSGG 113
DG G + GGGGG GG G DG GGGG +GG
Sbjct: 345 DGGGGSTQGGGGGGGGSTQGGGDGGGGE*TGGGGECTGG 229
Score = 52.8 bits (125), Expect = 5e-08
Identities = 39/104 (37%), Positives = 41/104 (38%), Gaps = 13/104 (12%)
Frame = -1
Query: 58 GGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGG--LGGDIGSGSD-----------GDD 104
GGGGG G GG+G GD G +GGGG G GD G D GDD
Sbjct: 522 GGGGGDEYTGGGGEGYAYTGDGGGEVYTGGGGEG*AYTGDGGGDGDGGG**GV*CGAGDD 343
Query: 105 GGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRGHD 148
GGGGS GG GGG GGS G D
Sbjct: 342 GGGGSTQGG----------------------GGGGGGSTQGGGD 277
Score = 50.4 bits (119), Expect = 3e-07
Identities = 35/100 (35%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Frame = -1
Query: 53 NGGDDGGGGG------GSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGG 106
+GG DG GGG G+G GG G G G GGG GG G G G + GG
Sbjct: 405 DGGGDGDGGG**GV*CGAGDDGGGGSTQGGGGGGGGSTQGGGDGGGGE*TGGGGECTGGG 226
Query: 107 GGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GG G T E GG GG G G
Sbjct: 225 GGGDKYGYT---------------GGVGE*GGGGGEXGGG 151
Score = 34.7 bits (78), Expect = 0.015
Identities = 16/35 (45%), Positives = 18/35 (50%)
Frame = -1
Query: 50 GVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCG 84
G GG++ G GGG GGG G G G D G G
Sbjct: 105 GTGGGGENTGAGGGGGGGEFGGGGGGDLTQYGGVG 1
>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
Length = 1338
Score = 59.3 bits (142), Expect = 6e-10
Identities = 40/111 (36%), Positives = 48/111 (43%), Gaps = 29/111 (26%)
Frame = +2
Query: 29 GGCRGGNSNAEWWLGRRRRQRG-----VENGGDDGGGGGGSGGGSGGDGV---------- 73
GG GG E WLG +++G GG+DGGG GG GGG+ G G+
Sbjct: 176 GGGGGGEGEGEGWLGGGGKRKGRGGGETRAGGEDGGGVGGGGGGTAGGGIPQWVQRAEGE 355
Query: 74 --------------GSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSG 110
G G G+ G GGGGG G G G G DGGG +G
Sbjct: 356 WNCRCGGGARVDDRGRPGRGGEVGGWGGGGGESEGARGWGG-GRDGGGQAG 505
Score = 55.8 bits (133), Expect = 6e-09
Identities = 30/60 (50%), Positives = 33/60 (55%)
Frame = +2
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GG GGGG G GGG G+G G G G G GGG GG+ G G G GGGG+ GG
Sbjct: 149 GGCGGGGGRGGGGGGEGEGEGWLGGGGKRKGRGGGETRAGGEDGGGVGG--GGGGTAGGG 322
Score = 52.8 bits (125), Expect = 5e-08
Identities = 43/134 (32%), Positives = 52/134 (38%), Gaps = 22/134 (16%)
Frame = +1
Query: 27 EGGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDG---- 82
EGGG GG GRR+ + G G D+ GGG G G GG G G G+ G
Sbjct: 172 EGGGWGGGGGGGGLVRGRRKEE-GAWGGRDESWGGGWRGSGGGGGGDGGGGNPAMGTKGG 348
Query: 83 ------------------CGSGGGGGGLGGDIGSGSDGDDGGGGSGSGGSTVEVMLMMVV 124
G+GGGG +GG G GG +G GG
Sbjct: 349 GGVELPMRRGGEGR*PWATGAGGGGRRVGGRRGGERRRAWVGGRTGWGG----------- 495
Query: 125 AVRVVVAATVEGGG 138
A R V +V+GGG
Sbjct: 496 AGRGVAGGSVQGGG 537
Score = 52.4 bits (124), Expect = 7e-08
Identities = 42/115 (36%), Positives = 47/115 (40%), Gaps = 23/115 (20%)
Frame = +2
Query: 26 LEGGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGS 85
L+ GGC GG G R G E G+ GGGG G GG + G+DG G G
Sbjct: 140 LDWGGCGGG--------GGRGGGGGGEGEGEGWLGGGGKRKGRGGGETRAGGEDGGGVG- 292
Query: 86 GGGGGGLGGDI---------------GSGSDGDDGG--------GGSGSGGSTVE 117
GGGGG GG I G G+ DD G GG G GG E
Sbjct: 293 GGGGGTAGGGIPQWVQRAEGEWNCRCGGGARVDDRGRPGRGGEVGGWGGGGGESE 457
Score = 48.1 bits (113), Expect = 1e-06
Identities = 37/92 (40%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = +3
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGG------DDGGGGGGSGGGSGGDGVGSDGDDGD 81
GGG RGG S + GRR GG D GGGG S GG G G
Sbjct: 300 GGGRRGGESR-NGYKGRRGSGTADAAGGRGSMTVGDRGGGGRSEGGGAEGGRAKARVGGG 476
Query: 82 GCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
G GGG G G +GSG G GG G GG
Sbjct: 477 ADGMGGGRQGCGWWVGSGWRGIGMLGG*GGGG 572
Score = 45.4 bits (106), Expect = 9e-06
Identities = 40/114 (35%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Frame = +3
Query: 58 GGGGGGSGGGSG-----------GDGVGSD----GDDGDGCGSGGGGGGLGGDIGSGSDG 102
GGGGGG GGG G G GVG + G +G GGGGG GG+ +G G
Sbjct: 165 GGGGGGVGGGRGRGRAG*GEEERGRGVGGERRELGGRMEGEWGGGGGGRRGGESRNGYKG 344
Query: 103 DDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGC----------GGSDGRG 146
G G + + G M V R EGGG GG+DG G
Sbjct: 345 RRGSGTADAAGGRGS----MTVGDR-GGGGRSEGGGAEGGRAKARVGGGADGMG 491
Score = 33.5 bits (75), Expect = 0.033
Identities = 23/63 (36%), Positives = 28/63 (43%), Gaps = 1/63 (1%)
Frame = +3
Query: 84 GSGGGGGGLGGDIGSGSDG-DDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGS 142
G+GGGGGG+GG G G G + G G GG E + +EG GG
Sbjct: 159 GAGGGGGGVGGGRGRGRAG*GEEERGRGVGGERRE------------LGGRMEGEWGGGG 302
Query: 143 DGR 145
GR
Sbjct: 303 GGR 311
Score = 25.4 bits (54), Expect = 9.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 126 VRVVVAATVEGGGCGGSDGRG 146
+ VVV A GGG GG GRG
Sbjct: 144 IGVVVGAGGGGGGVGGGRGRG 206
>TC87476 homologue to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
partial (48%)
Length = 939
Score = 58.9 bits (141), Expect = 7e-10
Identities = 39/88 (44%), Positives = 40/88 (45%), Gaps = 28/88 (31%)
Frame = -1
Query: 54 GGDDGGGGGGS----GGGSGGDGVGSD----GDDGDGCGSGG------------GGGGLG 93
GG DG GGGG GGG GDG G D G G+G G GG GGGGL
Sbjct: 294 GGGDGDGGGGDL*TYGGGGEGDGGGGDL*I*GGGGEGVGGGGDL*TYGGGGDGEGGGGLL 115
Query: 94 GDIGSGSDGDD--------GGGGSGSGG 113
G G DGD GGGG G GG
Sbjct: 114 *TYGGGGDGDGGGGDLYTYGGGGEGDGG 31
Score = 55.5 bits (132), Expect = 8e-09
Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 17/70 (24%)
Frame = -1
Query: 55 GDDGGG------GGGSGGGSGGD----GVGSDGDDGDGC----GSGGGGGGLGGDI---G 97
GD GGG GGG G G GGD G G DG+ G G G GG G G GGD+ G
Sbjct: 234 GDGGGGDL*I*GGGGEGVGGGGDL*TYGGGGDGEGGGGLL*TYGGGGDGDGGGGDLYTYG 55
Query: 98 SGSDGDDGGG 107
G +GD GGG
Sbjct: 54 GGGEGDGGGG 25
Score = 53.9 bits (128), Expect = 2e-08
Identities = 35/73 (47%), Positives = 36/73 (48%), Gaps = 19/73 (26%)
Frame = -1
Query: 60 GGGGSGGGSGGD----GVGSDGDDGDG----CGSGGGGGGLGGDI--------GSGSDGD 103
GGGG G G GGD G G DGD G G G GG G G GGD+ G G GD
Sbjct: 345 GGGGEGDGGGGDL*TYGGGGDGDGGGGDL*TYGGGGEGDGGGGDL*I*GGGGEGVGGGGD 166
Query: 104 ---DGGGGSGSGG 113
GGGG G GG
Sbjct: 165 L*TYGGGGDGEGG 127
Score = 53.5 bits (127), Expect = 3e-08
Identities = 39/87 (44%), Positives = 42/87 (47%), Gaps = 27/87 (31%)
Frame = -3
Query: 54 GGDDGGGGGGS---GGGSGGDGVGSD----GDDGDGCGSGG-----GGGGL----GGDI- 96
GGD GGGG GGG G+G G D G GDG G GG GGGG GGD+
Sbjct: 676 GGDGDGGGGDL*I*GGGGEGEGGGGDL*PYGGGGDGEGGGGDL**YGGGGEAEGGGGDL* 497
Query: 97 --GSGSDGDD--------GGGGSGSGG 113
G G +GD GGGG G GG
Sbjct: 496 T*GGGGEGDGGGGDL*TYGGGGEGEGG 416
Score = 52.0 bits (123), Expect = 9e-08
Identities = 33/72 (45%), Positives = 36/72 (49%), Gaps = 12/72 (16%)
Frame = -3
Query: 54 GGDDGGGGGGS----GGGSGGDGVGSD----GDDGDGCGSGGG----GGGLGGDIGSGSD 101
GG DG GGGG GGG +G G D G G+G G GG GGG G+ G G
Sbjct: 583 GGGDGEGGGGDL**YGGGGEAEGGGGDL*T*GGGGEGDGGGGDL*TYGGGGEGEGGGGDL 404
Query: 102 GDDGGGGSGSGG 113
GGGG G GG
Sbjct: 403 *TYGGGGEGDGG 368
Score = 45.4 bits (106), Expect = 9e-06
Identities = 32/77 (41%), Positives = 35/77 (44%), Gaps = 17/77 (22%)
Frame = -3
Query: 54 GGDDGGGGGGS----GGGSGGDGVGSDGDDGDGCGSGGGGGGLGGD-----IGSGSDGDD 104
GG DG GGGG GGG G+G G GD GGGG G GG G G + +
Sbjct: 679 GGGDGDGGGGDL*I*GGGGEGEGGG-----GDL*PYGGGGDGEGGGGDL**YGGGGEAEG 515
Query: 105 --------GGGGSGSGG 113
GGGG G GG
Sbjct: 514 GGGDL*T*GGGGEGDGG 464
Score = 43.1 bits (100), Expect = 4e-05
Identities = 30/66 (45%), Positives = 33/66 (49%), Gaps = 12/66 (18%)
Frame = -1
Query: 54 GGDDGGGGGGS----GGGSGGDGVG----SDGDDGDGCGSGGG----GGGLGGDIGSGSD 101
GG +G GGGG GGG G+G G + G GDG G GG GGG GD G G
Sbjct: 198 GGGEGVGGGGDL*TYGGGGDGEGGGGLL*TYGGGGDGDGGGGDLYTYGGGGEGDGGGGDL 19
Query: 102 GDDGGG 107
GGG
Sbjct: 18 YIYGGG 1
>BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like protein
(clone pMG14) - common tobacco (fragment), partial (11%)
Length = 632
Score = 58.5 bits (140), Expect = 1e-09
Identities = 49/129 (37%), Positives = 58/129 (43%), Gaps = 11/129 (8%)
Frame = -1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGG------GSGGDGVGSDGDDGD 81
GG GGNS+ G +G D G GGG GG SG G GS GD D
Sbjct: 509 GGLADGGNSSTG----------GDRDGLDAGLGGGLDGGNGDGSVASGRSGSGSRGDGVD 360
Query: 82 GCG----SGGGGGGLGGDIGS-GSDGDDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEG 136
G G G GGGG ++G G DGDD GG +G+ G AV + +A +G
Sbjct: 359 GGGGRDRDGDGGGGENRELGRVGDDGDDAGGDNGAAGG----------AVGDLRSA*GDG 210
Query: 137 GGCGGSDGR 145
GG DGR
Sbjct: 209 EVLGGEDGR 183
Score = 48.5 bits (114), Expect = 1e-06
Identities = 32/72 (44%), Positives = 37/72 (50%), Gaps = 8/72 (11%)
Frame = -1
Query: 51 VENGGDDGGGGGGSG--GGSGGDGVGSDGDDGDGCGSGGG---GG---GLGGDIGSGSDG 102
V++ GDDGG G G GG+ DG G GD G G GG GG GL +G G DG
Sbjct: 602 VDDRGDDGGDAGRDGLDGGARADG-GRLGDQGGGLADGGNSSTGGDRDGLDAGLGGGLDG 426
Query: 103 DDGGGGSGSGGS 114
+G G SG S
Sbjct: 425 GNGDGSVASGRS 390
Score = 48.5 bits (114), Expect = 1e-06
Identities = 38/103 (36%), Positives = 47/103 (44%), Gaps = 9/103 (8%)
Frame = -1
Query: 25 VLEGGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGG-GGGSGGGSGGDGVGSDGDDGDGC 83
+++ G GG++ + G R G GD GGG G +GGD G D G G
Sbjct: 605 LVDDRGDDGGDAGRDGLDGGARADGG--RLGDQGGGLADGGNSSTGGDRDGLDAGLGGGL 432
Query: 84 GSGGGGGGLG-GDIGSGSDGD--DGGG-----GSGSGGSTVEV 118
G G G + G GSGS GD DGGG G G GG E+
Sbjct: 431 DGGNGDGSVASGRSGSGSRGDGVDGGGGRDRDGDGGGGENREL 303
Score = 29.6 bits (65), Expect = 0.48
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 71 DGVGSD-GDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGGST 115
DG+ D GDDG G G GG D G D GGG GG++
Sbjct: 611 DGLVDDRGDDGGDAGRDGLDGGARAD---GGRLGDQGGGLADGGNS 483
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 57.8 bits (138), Expect = 2e-09
Identities = 40/97 (41%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = +3
Query: 27 EGGGCRGGNSNAEWWLGRRRRQRGVENGGDDG--GGGGGSGGGSGGDGVGSDGDDGDGCG 84
EGGG RG W +RG E GG GGGG GG GG G G G G
Sbjct: 33 EGGGARGAGG----W------RRGGEVGGSGWCVWGGGGGGGRCGGGGGGGGGRGGAEAA 182
Query: 85 SGGGGGGLGGDI--------GSGSDGDDGGGGSGSGG 113
GGGGG GGD GSG+ G G G GG
Sbjct: 183 GPGGGGGGGGDALGRRRLAKGSGAGGGGGARSRGGGG 293
Score = 55.1 bits (131), Expect = 1e-08
Identities = 36/95 (37%), Positives = 38/95 (39%), Gaps = 10/95 (10%)
Frame = +3
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGC---- 83
GG RGG W G GG GGGGGG GG G + G G G G
Sbjct: 57 GGWRRGGEVGGSGWCV----WGGGGGGGRCGGGGGGGGGRGGAEAAGPGGGGGGGGDALG 224
Query: 84 ------GSGGGGGGLGGDIGSGSDGDDGGGGSGSG 112
GSG GGGG G G G G G G+G
Sbjct: 225 RRRLAKGSGAGGGGGARSRGGGGPGGWGRAGQGTG 329
Score = 53.9 bits (128), Expect = 2e-08
Identities = 37/95 (38%), Positives = 43/95 (44%)
Frame = +3
Query: 52 ENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGS 111
E GG G GG GG GG G G G G GGGGGG GG G+ + G GGGG G
Sbjct: 33 EGGGARGAGGWRRGGEVGGSGWCVWGGGGGGGRCGGGGGGGGGRGGAEAAGPGGGGGGGG 212
Query: 112 GGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
+ R + + GGG GG+ RG
Sbjct: 213 D----------ALGRRRLAKGSGAGGG-GGARSRG 284
Score = 51.6 bits (122), Expect = 1e-07
Identities = 37/100 (37%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Frame = +3
Query: 50 GVENGGDDGGGGGGSGGGSGGDGVGSDG----DDGDGCGSGGGGGGLGGDIGSGSDGDDG 105
G N +GGG G+GG G VG G G G G GGGGG GG G G
Sbjct: 12 GAINYIPEGGGARGAGGWRRGGEVGGSGWCVWGGGGGGGRCGGGGGGGGGRGGAEAAGPG 191
Query: 106 GGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGR 145
GGG G G + L A GGG G GR
Sbjct: 192 GGGGGGGDALGRRRLAKGSGAGGGGGARSRGGGGPGGWGR 311
Score = 50.1 bits (118), Expect = 3e-07
Identities = 45/127 (35%), Positives = 51/127 (39%), Gaps = 20/127 (15%)
Frame = +1
Query: 42 LGRRRRQRG-VENGGDDGGGG----GGSGGGSGGDGVGSDGDDGDGC------GSGGGGG 90
LG RR RG GG GGG GG+ GG GG G G G G G G+ G G
Sbjct: 436 LGGRRGARGRAPRGGGGGGGAASDCGGALGGDGGGGTGGGGRGGRGYVATRTRGTSAGRG 615
Query: 91 GLGGDIGSGSDGDDGGGGSGSGGSTVEVML-----MMVVAVRVVVAATVEGGGCGGSDG- 144
+ G+ GGGG G GG V M+ A V GG G +DG
Sbjct: 616 CPPIFLARGTRSHSGGGGGGRGGGRRGVAAGCARGMLCGARAQGAPGGVALGGAGRADGA 795
Query: 145 ---RGHD 148
R HD
Sbjct: 796 RSTRAHD 816
Score = 47.4 bits (111), Expect = 2e-06
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Frame = +1
Query: 43 GRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDG 102
GRR + GG GG G G GGG G G+ CG G GG G +G G+
Sbjct: 4 GRRELLIIYQKGGGRGGRGAGGGGGRWGAQAGA-------CGGVGAGGAAAGGVGGGAGA 162
Query: 103 DDG------GGGSGSGG 113
+ G GGG+ +GG
Sbjct: 163 EGGRRRRARGGGAVAGG 213
Score = 46.6 bits (109), Expect = 4e-06
Identities = 39/128 (30%), Positives = 44/128 (33%), Gaps = 42/128 (32%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGS-- 85
GG GG +A L RGV G G G G +GG GG G G G C +
Sbjct: 193 GGAVAGGMPSAAGGL-----LRGVGPGAGGGPGPGAAGGRVGGGGRGRGRGSGPRCAALG 357
Query: 86 ----------------------------------------GGGGGGLGGDIGSGSDGDDG 105
GGGGGG D G G+ G DG
Sbjct: 358 EFPDLGPGTTATP*RGARGWPAGSGALGGRRGARGRAPRGGGGGGGAASDCG-GALGGDG 534
Query: 106 GGGSGSGG 113
GGG+G GG
Sbjct: 535 GGGTGGGG 558
Score = 45.8 bits (107), Expect = 7e-06
Identities = 33/95 (34%), Positives = 41/95 (42%), Gaps = 1/95 (1%)
Frame = +1
Query: 23 MAVLEGGGCRGGNSNAEWWLGRRRRQRGVENG-GDDGGGGGGSGGGSGGDGVGSDGDDGD 81
+ + + GG RGG A GR Q G G G G GG GGG+G +G G
Sbjct: 19 LIIYQKGGGRGGRG-AGGGGGRWGAQAGACGGVGAGGAAAGGVGGGAGAEGGRRRRARGG 195
Query: 82 GCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGGSTV 116
G +GG GG + G GG G G+ G V
Sbjct: 196 GAVAGGMPSAAGGLLRGVGPGAGGGPGPGAAGGRV 300
Score = 44.7 bits (104), Expect = 1e-05
Identities = 35/102 (34%), Positives = 43/102 (41%)
Frame = +2
Query: 43 GRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDG 102
GR +RG G GG GG GG G G +G G+G GG GG++G G
Sbjct: 404 GRAGGRRGRGRWGAGGGRAGGRRGGGAGGGARPRIVEGLWGGTGAGGLAGGGEVGGGM-* 580
Query: 103 DDGGGGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDG 144
G G GG+ + RV + EGGG GG G
Sbjct: 581 RLGREGRAPGGAAHQFSWQ---EGRVPIPGGEEGGGGGGGGG 697
Score = 43.5 bits (101), Expect = 3e-05
Identities = 31/68 (45%), Positives = 34/68 (49%), Gaps = 1/68 (1%)
Frame = +1
Query: 33 GGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGG-GGGG 91
GG + AE GRRRR RG G GG +GG G G G+ G G G G GGGG
Sbjct: 145 GGGAGAEG--GRRRRARG--GGAVAGGMPSAAGGLLRGVGPGAGGGPGPGAAGGRVGGGG 312
Query: 92 LGGDIGSG 99
G GSG
Sbjct: 313 RGRGRGSG 336
Score = 40.4 bits (93), Expect = 3e-04
Identities = 38/108 (35%), Positives = 42/108 (38%), Gaps = 19/108 (17%)
Frame = +1
Query: 58 GGGGGGSGGGSGGDGVGSDGDDGDGCGSGGG-----GGGLGGDIGSGSDGDDGGGGSGSG 112
G G +G G+ G G+ G G G GGG GG LGGD G G+ GGGG G
Sbjct: 403 GARGWPAGSGALGGRRGARGRAPRGGGGGGGAASDCGGALGGDGGGGT----GGGGRGGR 570
Query: 113 GSTVEVMLMMVVAVRVVVAATVEGGGC--------------GGSDGRG 146
G VA R T G GC GG GRG
Sbjct: 571 G---------YVATR--TRGTSAGRGCPPIFLARGTRSHSGGGGGGRG 681
Score = 38.5 bits (88), Expect = 0.001
Identities = 33/110 (30%), Positives = 39/110 (35%), Gaps = 26/110 (23%)
Frame = +3
Query: 30 GCRGGNSNAEW-----WLG-------RRRRQRGVEN------------GGDDGGGGGGSG 65
G GG +W W G R R+ G+ GG G GGG G
Sbjct: 516 GSGGGRGRGDWRGGARWAGVCSDSDERDERRAGLPTNFLGKRDAFPFRGGRRGAGGGEEG 695
Query: 66 GGSGGDGVGSDGDDGDGCGSGGGGG--GLGGDIGSGSDGDDGGGGSGSGG 113
GG G + GC GGG G G GG + G +GSGG
Sbjct: 696 GGGGVRARDAVRRSRAGCAWGGGAGRCGEGGRRAQHARARSSGVEAGSGG 845
Score = 37.7 bits (86), Expect = 0.002
Identities = 31/98 (31%), Positives = 35/98 (35%), Gaps = 17/98 (17%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGG--GGGS----------GGGSGGDGVGS 75
G G RG W + GV GG GG GG GGG+ G+ S
Sbjct: 43 GRGGRGAGGGGGRWGAQAGACGGVGAGGAAAGGVGGGAGAEGGRRRRARGGGAVAGGMPS 222
Query: 76 DGDD-----GDGCGSGGGGGGLGGDIGSGSDGDDGGGG 108
G G G G G G GG +G G G G G
Sbjct: 223 AAGGLLRGVGPGAGGGPGPGAAGGRVGGGGRGRGRGSG 336
Score = 37.0 bits (84), Expect = 0.003
Identities = 46/164 (28%), Positives = 51/164 (31%), Gaps = 45/164 (27%)
Frame = +2
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGG---------------------GGGSGG 66
GG RGG W G R RG GG GGG GGG
Sbjct: 107 GGWGRGGPLRGGW--GGGRGPRGGGGGGPGGGGRWRGGCPRPQAAC*GEWGRGRGGGPVQ 280
Query: 67 GSGGDGVGSDGDDGDGCGSGG------------------GGGGLGGDIGSGSDGDDGG-- 106
G G G +G GDG G GG GG G G G GG
Sbjct: 281 GRRGAGWVGEGGAGDGALDPGVPPLGSFLTLARAPRRRPDGGRAGGRRGRGRWGAGGGRA 460
Query: 107 ----GGSGSGGSTVEVMLMMVVAVRVVVAATVEGGGCGGSDGRG 146
GG GG+ + V + T GG GG + G
Sbjct: 461 GGRRGGGAGGGARPRI-------VEGLWGGTGAGGLAGGGEVGG 571
Score = 26.2 bits (56), Expect = 5.3
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +3
Query: 26 LEGGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGGDGVG 74
++G G RG G RRR G E + GG+G G G G
Sbjct: 1035 IDGAGRRGA--------GARRRDAGAERRVRNAA*AGGAGAGCGAREYG 1157
>TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (34%)
Length = 507
Score = 57.4 bits (137), Expect = 2e-09
Identities = 40/89 (44%), Positives = 43/89 (47%), Gaps = 25/89 (28%)
Frame = -1
Query: 50 GVENGGDDGGG------GGGSGGGSGGD----GVGSDGDDGDG----CGSGGGGGGLGGD 95
GV GD GGG GGG G G GGD G G +GD G G G GG G G GGD
Sbjct: 477 GVWGIGDGGGGDL**YGGGGDGEGGGGDL***GGGGEGDGGGGDL**YGGGGDGEGGGGD 298
Query: 96 I---GSGSDGDDGGG--------GSGSGG 113
+ G G DG+ GGG G G GG
Sbjct: 297 L**YGGGGDGEGGGGDL***GVLGIGDGG 211
Score = 52.8 bits (125), Expect = 5e-08
Identities = 40/94 (42%), Positives = 42/94 (44%), Gaps = 32/94 (34%)
Frame = -1
Query: 52 ENGGDD----GGGGGGSGGGS-------GGDGVGSDGD----DGDGCGSGGGGG------ 90
E GG D GGGG G GGG GGDG G GD G G G GGGG
Sbjct: 411 EGGGGDL***GGGGEGDGGGGDL**YGGGGDGEGGGGDL**YGGGGDGEGGGGDL***GV 232
Query: 91 -----GLGGDI---GSGSDGDDGGGG---SGSGG 113
G GGD+ G G DG+ GGG G GG
Sbjct: 231 LGIGDGGGGDL**YGGGGDGEGGGGDL**YGGGG 130
Score = 28.1 bits (61), Expect = 1.4
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 6/28 (21%)
Frame = -1
Query: 50 GVENGGDDGGG------GGGSGGGSGGD 71
GV GD GGG GGG G G GGD
Sbjct: 237 GVLGIGDGGGGDL**YGGGGDGEGGGGD 154
>TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (32%)
Length = 777
Score = 57.0 bits (136), Expect = 3e-09
Identities = 35/70 (50%), Positives = 37/70 (52%), Gaps = 17/70 (24%)
Frame = -2
Query: 55 GDDGGG------GGGSGGGSGGD----GVGSDGDDGDGC----GSGGGGGGLGGDI---G 97
GD GGG GGG G G GGD G G DG+ G G G GG G G GGD+ G
Sbjct: 218 GDGGGGL**W*GGGGDGDGGGGDL***GGGGDGEGGGGDL***GGGGDGDGGGGDL***G 39
Query: 98 SGSDGDDGGG 107
G DGD GGG
Sbjct: 38 GGGDGDGGGG 9
Score = 54.7 bits (130), Expect = 1e-08
Identities = 39/90 (43%), Positives = 42/90 (46%), Gaps = 27/90 (30%)
Frame = -2
Query: 51 VENGGDDGGGGGGS---GGGSGGDGVGSD---------GDDGDGC----GSGGGGGGLGG 94
V GGD GGGG + GGG GDG G D GD G G G GG G G GG
Sbjct: 332 VGGGGDFTGGGGLT*W*GGGGDGDGGGGDL***GG*EMGDGGGGL**W*GGGGDGDGGGG 153
Query: 95 DI---GSGSDGDD--------GGGGSGSGG 113
D+ G G DG+ GGGG G GG
Sbjct: 152 DL***GGGGDGEGGGGDL***GGGGDGDGG 63
Score = 52.8 bits (125), Expect = 5e-08
Identities = 43/114 (37%), Positives = 43/114 (37%), Gaps = 28/114 (24%)
Frame = -2
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGS--------------------GGG 67
GGG G W G GG DG GGGG GGG
Sbjct: 326 GGGDFTGGGGLT*W*G----------GGGDGDGGGGDL***GG*EMGDGGGGL**W*GGG 177
Query: 68 SGGDGVGSD----GDDGDGCGSGGG----GGGLGGDIGSGSDGDDGGGGSGSGG 113
GDG G D G GDG G GG GGG GD G G GGGG G GG
Sbjct: 176 GDGDGGGGDL***GGGGDGEGGGGDL***GGGGDGDGGGGDL***GGGGDGDGG 15
Score = 43.1 bits (100), Expect = 4e-05
Identities = 24/44 (54%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
Frame = -2
Query: 54 GGDDGGGGGGS----GGGSGGDGVGSD----GDDGDGCGSGGGG 89
GG DG GGGG GGG GDG G D G GDG G GG G
Sbjct: 134 GGGDGEGGGGDL***GGGGDGDGGGGDL***GGGGDGDGGGGPG 3
Score = 31.2 bits (69), Expect = 0.17
Identities = 24/59 (40%), Positives = 24/59 (40%), Gaps = 10/59 (16%)
Frame = -2
Query: 65 GGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGG----------GSGSGG 113
GGG VG GD GGGGL G G DGD GGG G G GG
Sbjct: 356 GGGEA*I*VGGGGDFT-------GGGGLT*W*GGGGDGDGGGGDL***GG*EMGDGGGG 201
>BM814145 homologue to GP|21322711|em pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (3%)
Length = 111
Score = 56.6 bits (135), Expect = 4e-09
Identities = 25/37 (67%), Positives = 25/37 (67%)
Frame = +1
Query: 58 GGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGG 94
GGGGGG GGG GG G G G G G G GGGGGG GG
Sbjct: 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 111
Score = 55.1 bits (131), Expect = 1e-08
Identities = 24/37 (64%), Positives = 24/37 (64%)
Frame = +1
Query: 55 GDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGG 91
G GGGGGG GGG GG G G G G G G GGGGGG
Sbjct: 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 111
Score = 55.1 bits (131), Expect = 1e-08
Identities = 24/37 (64%), Positives = 24/37 (64%)
Frame = +1
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGG 90
GG GGGGGG GGG GG G G G G G G GGGGG
Sbjct: 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 111
Score = 50.4 bits (119), Expect = 3e-07
Identities = 28/56 (50%), Positives = 28/56 (50%)
Frame = +2
Query: 58 GGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GGGGGG GGG GG G G G G GGGGGG GGGG G GG
Sbjct: 2 GGGGGGVGGGGGGGG-------GGGGGGGGGGGG-------------GGGGGGGGG 109
Score = 50.1 bits (118), Expect = 3e-07
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +3
Query: 54 GGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGG 91
GG GG GGG GGG GG G G G G G G GGGGGG
Sbjct: 3 GGGGGGWGGGGGGGGGGGGGGGGG--GGGGGGGGGGGG 110
Score = 48.9 bits (115), Expect = 8e-07
Identities = 26/55 (47%), Positives = 26/55 (47%)
Frame = +1
Query: 59 GGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGG 113
GGGGG GGG GGGGGG GG G G G GGGG G GG
Sbjct: 1 GGGGGGGGG------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGG 111
Score = 48.1 bits (113), Expect = 1e-06
Identities = 24/42 (57%), Positives = 24/42 (57%)
Frame = +2
Query: 50 GVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGG 91
G GG GGGGGG GGG GG G G G G GGGGGG
Sbjct: 2 GGGGGGVGGGGGGGGGGGGGGGGGGGGG------GGGGGGGG 109
Score = 35.4 bits (80), Expect = 0.009
Identities = 20/42 (47%), Positives = 20/42 (47%)
Frame = +3
Query: 29 GGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGGGSGG 70
GG GG W G G GG GGGGGG GGG GG
Sbjct: 3 GGGGGG------WGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 110
>TC76706 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulated protein
CORA. [Alfalfa] {Medicago sativa}, partial (94%)
Length = 1034
Score = 56.2 bits (134), Expect = 5e-09
Identities = 39/103 (37%), Positives = 46/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 50 GVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGG-DIGSGSDGDDGGGG 108
G GG + GGG +GGG +G G G G GGG GG GG + G G G +GGGG
Sbjct: 223 GYNGGGYNHGGGYHNGGGGYHNGGGGYNHGGGGYNGGGGHGGHGGYNGGGGHGGYNGGGG 402
Query: 109 SGSGGSTVEVMLMMVVAVRVVVAATVEGGGC--GGSDGRGHDS 149
G G+ V + V A GG GGS G S
Sbjct: 403 HGGHGAAESVAVQTEEKTNEVNDAKYGGGSYNHGGSYNHGGGS 531
Score = 43.9 bits (102), Expect = 2e-05
Identities = 35/96 (36%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGG---GGS---GGGSGGDGVGSDGDDGD 81
GGG GG+ AE + + N GGG GGS GGGS G GS G
Sbjct: 391 GGGGHGGHGAAESVAVQTEEKTNEVNDAKYGGGSYNHGGSYNHGGGSYNHGGGSYHHGGG 570
Query: 82 GCGSGGGGGGLGGDIGSGSDGDDGGGGSGSGGSTVE 117
G GGGG G G GGG G G E
Sbjct: 571 GYNHGGGGHG----------GHGGGGHGGHGAEQTE 648
Score = 43.1 bits (100), Expect = 4e-05
Identities = 35/112 (31%), Positives = 42/112 (37%), Gaps = 25/112 (22%)
Frame = +1
Query: 28 GGGCRGGNSNAEWWLGRRRRQRGVENGGDDGGGGGGSGG--------------------- 66
GGG GG + G G +GG +GGGG G G
Sbjct: 313 GGGYNGGGGHG----GHGGYNGGGGHGGYNGGGGHGGHGAAESVAVQTEEKTNEVNDAKY 480
Query: 67 GSGGDGVGSDGDDGDGCGSGGGG----GGLGGDIGSGSDGDDGGGGSGSGGS 114
G G G + G G + GGG GG G + G G G GGGG G G+
Sbjct: 481 GGGSYNHGGSYNHGGGSYNHGGGSYHHGGGGYNHGGGGHGGHGGGGHGGHGA 636
Score = 38.5 bits (88), Expect = 0.001
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +1
Query: 50 GVENGGDDGGGGGGSGGGSGGDGVGSDGDDGDGCGSGGGGGGLGGDIGSGSDGDDGGGGS 109
G +GG + GGG GG + G G + G G +GGGG GG G +GGGG
Sbjct: 190 GYNHGGYNHGGGYNGGGYNHGGGYHNGGG---GYHNGGGGYNHGGG------GYNGGGGH 342
Query: 110 GSGG 113
G G
Sbjct: 343 GGHG 354
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.314 0.144 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,973,400
Number of Sequences: 36976
Number of extensions: 86065
Number of successful extensions: 10808
Number of sequences better than 10.0: 859
Number of HSP's better than 10.0 without gapping: 2172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5519
length of query: 150
length of database: 9,014,727
effective HSP length: 87
effective length of query: 63
effective length of database: 5,797,815
effective search space: 365262345
effective search space used: 365262345
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0090a.1