TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0070.9
         (437 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG585958 weakly similar to GP|22830897|dbj ORF-B {Oryza sativa (...    99  3e-21
TC83628 similar to GP|16604352|gb|AAL24182.1 AT5g12010/F14F18_18...    36  0.026
TC90837 weakly similar to GP|22202752|dbj|BAC07409. hypothetical...    34  0.097
BI271381 similar to GP|21397269|gb Unknown protein {Oryza sativa...    29  4.1
TC91411 similar to GP|15192738|gb|AAK91588.1 mRNA cap binding pr...    29  4.1
TC82260 similar to GP|19310478|gb|AAL84973.1 AT3g05350/T12H1_32 ...    28  5.3
TC88619 homologue to SP|Q43077|AMO_PEA Amine oxidase [copper-con...    28  5.3
TC89052 weakly similar to GP|166949|gb|AAA32913.1|| cytochrome P...    28  5.3
BI267254 similar to GP|19310478|gb AT3g05350/T12H1_32 {Arabidops...    28  5.3
TC89095 similar to GP|16604352|gb|AAL24182.1 AT5g12010/F14F18_18...    28  7.0

>BG585958 weakly similar to GP|22830897|dbj ORF-B {Oryza sativa (japonica
           cultivar-group)}, partial (13%)
          Length = 769

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 46/82 (56%), Positives = 63/82 (76%)
 Frame = +2

Query: 34  MEFYQQQQHANTVRPKKTRRVIKRDREAGNERLMKDYFSKNPVYTEELFRRRFRMRKHVF 93
           ++ Y Q++ A++ RP+  RR I+R+RE G +RL  DYFS+ PVY +E FRRR+RM KHVF
Sbjct: 425 LKVYPQEEFASSSRPRSQRRNIERNREEGYKRLFNDYFSEAPVYMDE*FRRRYRMHKHVF 604

Query: 94  LRIVEALGSYNPYFLMSVDAVG 115
           LRIVEALG ++ YF ++VDA G
Sbjct: 605 LRIVEALGQHDEYFQLTVDATG 670


>TC83628 similar to GP|16604352|gb|AAL24182.1 AT5g12010/F14F18_180
           {Arabidopsis thaliana}, partial (23%)
          Length = 773

 Score = 36.2 bits (82), Expect = 0.026
 Identities = 28/102 (27%), Positives = 43/102 (41%)
 Frame = +2

Query: 77  YTEELFRRRFRMRKHVFLRIVEALGSYNPYFLMSVDAVGRQGLSPLQKCTAAIRMLAYGS 136
           + ++ FRR FRM K  F  I   L S     +   +   R  +   Q+    I  LA G 
Sbjct: 443 FPDDEFRRCFRMSKQTFNMICNELDS----SVTKKNTTLRDAIPVRQRVAVCIYRLATGE 610

Query: 137 PADSVDEYVRIGESTAIECLKNFVEGVCEVFGGQYLRRPNEE 178
           P   V +   +G ST  + +      +  V   ++LR P+EE
Sbjct: 611 PLRLVSKKFGLGISTCHKLVLEVCAAIKSVLMQKFLRWPDEE 736


>TC90837 weakly similar to GP|22202752|dbj|BAC07409. hypothetical
           protein~similar to Oryza sativa chromosome10
           OSJNBa0079H13.17, partial (7%)
          Length = 596

 Score = 34.3 bits (77), Expect = 0.097
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
 Frame = +1

Query: 286 YYLADGIYPEWGTFVKTIPM-----------PQGEKKQKFAKRQEAARKDVERAFGVLQS 334
           YYL D  YP+   ++   P            P    ++ F +   + R  +ER+FGVL+ 
Sbjct: 10  YYLVDKGYPDKEGYMVPYPRIRYHQSQFEHEPPTNAQEAFNRAHSSLRSCIERSFGVLKK 189

Query: 335 RFAIVRGPSRWWHPNDMKSIIYACIILHNMI 365
           R+ I+    ++     +  +I A   LHN I
Sbjct: 190 RWKILNKMPQFSVKTQI-DVIIAAFALHNYI 279


>BI271381 similar to GP|21397269|gb Unknown protein {Oryza sativa (japonica
           cultivar-group)}, partial (2%)
          Length = 407

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 311 KQKFAKRQEAARKDVERAFGVLQSRFAIVR 340
           ++ F  R  + R  +ER FGVL++RF I++
Sbjct: 137 EELFNYRHSSLRMTIERCFGVLKNRFPILK 226


>TC91411 similar to GP|15192738|gb|AAK91588.1 mRNA cap binding protein
           {Arabidopsis thaliana}, partial (21%)
          Length = 740

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 209 CPVAWKGQYTRGDHGRPTIMLEAVASQDLWIWH 241
           CP +   Q +  D G P+ M  A+ASQD ++W+
Sbjct: 217 CPSS*ARQLSN*DFGVPSYMC*AIASQDSFLWN 315


>TC82260 similar to GP|19310478|gb|AAL84973.1 AT3g05350/T12H1_32
           {Arabidopsis thaliana}, partial (20%)
          Length = 700

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
 Frame = -3

Query: 186 WGESR----GFPGMLGSIDCMHWEWKNCPVAWK 214
           WG SR    GF G+ G +  + W WK C   W+
Sbjct: 236 WGRSRNLRNGFYGV-GKMVSLRWNWKWCNCGWR 141


>TC88619 homologue to SP|Q43077|AMO_PEA Amine oxidase [copper-containing]
           precursor (EC 1.4.3.6). [Garden pea] {Pisum sativum},
           partial (67%)
          Length = 1519

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 24/102 (23%), Positives = 43/102 (41%), Gaps = 5/102 (4%)
 Frame = +1

Query: 281 MYHIGYYLADGIYPEWG-TFVKTIPMPQGEKKQKFAKRQEA----ARKDVERAFGVLQSR 335
           MY++ + + DG+   +  T +KT+ +  G  K+K     E        D +   G+    
Sbjct: 766 MYYLDFDI-DGVQNSFEKTSLKTVKITDGSSKRKSYWTTETQIAKTESDAKITLGLAPGE 942

Query: 336 FAIVRGPSRWWHPNDMKSIIYACIILHNMIVEDERNTYKGNF 377
            AIV    +    ND+   +   I  H ++ ED+    +G F
Sbjct: 943 LAIVNPNKKTIVGNDVGYRLIPAIPAHPLLTEDDYPQIRGAF 1068


>TC89052 weakly similar to GP|166949|gb|AAA32913.1|| cytochrome P-450LXXIA1
           (cyp71A1) {Persea americana}, partial (38%)
          Length = 856

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 324 DVERAFGVLQSRFAIVRGPSRWWHPNDMK 352
           D+E    V+ + +AI R PS W HP + K
Sbjct: 464 DIEAGTEVIINAWAIARDPSSWEHPLEFK 550


>BI267254 similar to GP|19310478|gb AT3g05350/T12H1_32 {Arabidopsis
           thaliana}, partial (21%)
          Length = 620

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
 Frame = -2

Query: 186 WGESR----GFPGMLGSIDCMHWEWKNCPVAWK 214
           WG SR    GF G+ G +  + W WK C   W+
Sbjct: 145 WGRSRNLRNGFYGV-GKMVSLRWNWKWCNCGWR 50


>TC89095 similar to GP|16604352|gb|AAL24182.1 AT5g12010/F14F18_180
           {Arabidopsis thaliana}, partial (15%)
          Length = 696

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 17/37 (45%), Positives = 22/37 (58%), Gaps = 2/37 (5%)
 Frame = +1

Query: 68  KDYFSK--NPVYTEELFRRRFRMRKHVFLRIVEALGS 102
           KD++ K  +P + EE FRR FRM K  F  I + L S
Sbjct: 481 KDWWQKCSSPDFPEEEFRRCFRMSKATFEFICQELES 591


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.137    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,070,218
Number of Sequences: 36976
Number of extensions: 174421
Number of successful extensions: 869
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of query: 437
length of database: 9,014,727
effective HSP length: 99
effective length of query: 338
effective length of database: 5,354,103
effective search space: 1809686814
effective search space used: 1809686814
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)