BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0311.7
(381 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16994 similar to UP|O22805 (O22805) At2g33550 protein, partial... 74 5e-14
BP033767 50 8e-07
TC14645 similar to UP|Q41122 (Q41122) Proline-rich protein precu... 39 4e-05
CB829112 44 6e-05
TC7926 homologue to UP|PGKH_TOBAC (Q42961) Phosphoglycerate kina... 43 8e-05
BP072816 43 8e-05
TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28... 43 1e-04
AW428678 43 1e-04
TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Ce... 43 1e-04
BP056337 42 1e-04
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part... 42 1e-04
TC8205 similar to UP|Q94JW1 (Q94JW1) AT3g15820/MSJ11_22, partial... 42 2e-04
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 42 2e-04
TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-bindi... 42 2e-04
TC13980 similar to UP|Q9SGT0 (Q9SGT0) T6H22.18 protein (F14J16.3... 42 2e-04
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 42 2e-04
CB828813 41 3e-04
BP042651 40 5e-04
AW720113 40 5e-04
TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%) 38 0.003
>TC16994 similar to UP|O22805 (O22805) At2g33550 protein, partial (36%)
Length = 680
Score = 73.6 bits (179), Expect = 5e-14
Identities = 49/159 (30%), Positives = 68/159 (41%)
Frame = +2
Query: 38 APPLPSSSSAPRDYRKGNWTIQETLILITAKKLDDERRLKASSPPPPPTTTTTPHDPSTT 97
+PP ++S R WT QE L+LI K D E R K
Sbjct: 203 SPPFAAASDERPTARLPRWTRQEILVLIQGKA-DAESRFK-------------------- 319
Query: 98 PRPSPAACSAASSSRTSGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYES 157
P AA SA SS E +W V +YC HG R QC +W NL DYKK++++ES
Sbjct: 320 --PGRAAGSAFGSS----EPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWES 481
Query: 158 KSESKDHNYNFPSYWTLNKQQRKDHNLPSNMVFEIYQAI 196
+ + S+W + R++ LP E+Y +
Sbjct: 482 SVKDETE-----SFWLMRNDLRRERKLPGYFDREVYDVL 583
Score = 26.6 bits (57), Expect = 7.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPPA 256
PPP P P P PP P PA
Sbjct: 665 PPPHEPPPRAPSQSPEPP*QQPATPA 588
>BP033767
Length = 541
Score = 49.7 bits (117), Expect = 8e-07
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Frame = +1
Query: 5 STTP---IPPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQET 61
ST P P P+N P HHHHHH HL + PP P P + +
Sbjct: 145 STNPSHKAPFHPLN-PQTHHHHHHLPHLQTQNTHFPPPPQPPPPKMPPHLSSPHTHLHHH 321
Query: 62 LIL-----ITAKKLDDERRLKASSPPPPPTTTTTPHDPSTTPRPSPAACSAASSS 111
L+L + LK +P PP +++ +P PS P PSP++ S SS+
Sbjct: 322 LLLPPPSPPSPPTSPPSSSLKPPNPNPPTSSSASPLPPS--PAPSPSSLSPPSST 480
Score = 33.1 bits (74), Expect = 0.079
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 16/55 (29%)
Frame = +1
Query: 223 LVTLVTSTPPPQHPQPLQAQP--------------LPPPPPP--PPQPPATSITP 261
L T T PPP P P + P LPPP PP P PP++S+ P
Sbjct: 223 LQTQNTHFPPPPQPPPPKMPPHLSSPHTHLHHHLLLPPPSPPSPPTSPPSSSLKP 387
Score = 31.6 bits (70), Expect = 0.23
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 237 QPLQAQPLPPPPPPPPQPPATSITPAGSEY 266
QP LPP PP P PP+ S +P +Y
Sbjct: 150 QPFTQGSLPPSQPPNPPPPSPSPSPPNPKY 239
Score = 30.8 bits (68), Expect = 0.39
Identities = 15/43 (34%), Positives = 19/43 (43%), Gaps = 1/43 (2%)
Frame = +3
Query: 214 PQQQQQQQPLVTL-VTSTPPPQHPQPLQAQPLPPPPPPPPQPP 255
P Q +P++ + P Q P P PPPP P P PP
Sbjct: 99 PLQLLSSEPIINRRILHQPFTQGSLPPSQPPNPPPPSPSPSPP 227
Score = 30.0 bits (66), Expect = 0.67
Identities = 12/28 (42%), Positives = 14/28 (49%)
Frame = +1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPPATS 258
PPP P P + P PP P PP +S
Sbjct: 331 PPPSPPSPPTSPPSSSLKPPNPNPPTSS 414
Score = 29.3 bits (64), Expect = 1.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 231 PPPQHPQPLQAQPLPPPPPPPP---QPPATSITPA 262
P P P A PLPP P P P PP+++ A
Sbjct: 388 PNPNPPTSSSASPLPPSPAPSPSSLSPPSSTADAA 492
Score = 28.1 bits (61), Expect = 2.5
Identities = 20/69 (28%), Positives = 26/69 (36%), Gaps = 12/69 (17%)
Frame = +3
Query: 206 QRFITTTTPQQQQQQQPLVTLVTSTPPPQHP---QPLQAQ---------PLPPPPPPPPQ 253
Q F + P Q P + S P P++P P P P PPPPP
Sbjct: 150 QPFTQGSLPPSQPPNPPPPSPSPSPPNPKYPFSSTPTTTTTQNASTPFFPTYPSPPPPPS 329
Query: 254 PPATSITPA 262
P + + PA
Sbjct: 330 PSSFASFPA 356
Score = 26.9 bits (58), Expect = 5.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 228 TSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITPAGS 264
+S PP P + P PP P P P +S++P S
Sbjct: 373 SSLKPPNPNPPTSSSASPLPPSPAPSP--SSLSPPSS 477
Score = 26.9 bits (58), Expect = 5.6
Identities = 10/24 (41%), Positives = 14/24 (57%)
Frame = +1
Query: 245 PPPPPPPPQPPATSITPAGSEYNH 268
PPP PPPP+ P +P ++H
Sbjct: 250 PPPQPPPPKMPPHLSSPHTHLHHH 321
Score = 26.2 bits (56), Expect = 9.6
Identities = 17/54 (31%), Positives = 20/54 (36%), Gaps = 11/54 (20%)
Frame = +3
Query: 4 PSTTPIPPPPINIPDPHHHHH-----------HNHHLPLLHGTTTAPPLPSSSS 46
PS P PPPP P P + + N P + PP PS SS
Sbjct: 177 PSQPPNPPPPSPSPSPPNPKYPFSSTPTTTTTQNASTPFFPTYPSPPPPPSPSS 338
>TC14645 similar to UP|Q41122 (Q41122) Proline-rich protein precursor,
partial (52%)
Length = 1060
Score = 38.5 bits (88), Expect = 0.002
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 10/48 (20%)
Frame = +2
Query: 4 PSTTPIPPP-------PINIPDPHHHHHHNHH---LPLLHGTTTAPPL 41
P+ PI PP P+ P HHHHHH P L+ T T PPL
Sbjct: 314 PAPAPIKPPVHPPTSVPVKPPTGHHHHHHPPSPAPAPALYTTITLPPL 457
Score = 35.8 bits (81), Expect(2) = 4e-05
Identities = 17/44 (38%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
Frame = +2
Query: 8 PIPPP---PINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAP 48
P+ PP PI+ P HHHH+HH P PP+ +S P
Sbjct: 233 PVHPPTHSPIHPPAHAPHHHHHHHPPAPAPAPIKPPVHPPTSVP 364
Score = 28.1 bits (61), Expect(2) = 0.052
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 238 PLQAQPLPPPPPPP 251
P ++P PPPPPPP
Sbjct: 265 PTGSRPTPPPPPPP 306
Score = 27.3 bits (59), Expect(2) = 4e-05
Identities = 17/36 (47%), Positives = 18/36 (49%), Gaps = 7/36 (19%)
Frame = +3
Query: 82 PPPPTTTTT------PHDPSTTPRPS-PAACSAASS 110
PPP TTTTT P T P PS P +CS S
Sbjct: 372 PPPATTTTTILLPLLLLQPCTPPLPSHPCSCSPTCS 479
Score = 26.2 bits (56), Expect = 9.6
Identities = 10/24 (41%), Positives = 12/24 (49%)
Frame = +1
Query: 243 PLPPPPPPPPQPPATSITPAGSEY 266
P PPPPPP P + +P Y
Sbjct: 373 PHRPPPPPPSSFPCSCSSPVHHHY 444
Score = 26.2 bits (56), Expect = 9.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 8 PIPPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDY 51
P PPPP + P H+H+ P T AP P PR +
Sbjct: 382 PPPPPPSSFPCSCSSPVHHHYPP-----TPAPVHPPVHPFPRSF 498
Score = 24.3 bits (51), Expect(2) = 0.052
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = +1
Query: 246 PPPPPPPQPPATSITPAGSEYNH 268
PPPPPPP + A S +H
Sbjct: 286 PPPPPPPTGSGSCSY*ASSSPSH 354
>CB829112
Length = 234
Score = 43.5 bits (101), Expect = 6e-05
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = +3
Query: 208 FITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITP 261
F T++ Q+ LV+L PPP PL P PPPPPP PPAT I P
Sbjct: 6 FSQTSSSPQRATS*ALVSLAPLAPPPP---PLLLPPPLLPPPPPPPPPATHILP 158
Score = 28.1 bits (61), Expect = 2.5
Identities = 13/31 (41%), Positives = 16/31 (50%)
Frame = +3
Query: 81 PPPPPTTTTTPHDPSTTPRPSPAACSAASSS 111
PPPPP T P PS + S SA+S +
Sbjct: 126 PPPPPATHILPMTPSRMTQMSSKRSSASSEA 218
Score = 26.6 bits (57), Expect = 7.4
Identities = 11/24 (45%), Positives = 12/24 (49%)
Frame = +3
Query: 80 SPPPPPTTTTTPHDPSTTPRPSPA 103
+PPPPP P P P P PA
Sbjct: 72 APPPPPLLLPPPLLPPPPPPPPPA 143
>TC7926 homologue to UP|PGKH_TOBAC (Q42961) Phosphoglycerate kinase,
chloroplast precursor , partial (86%)
Length = 1857
Score = 43.1 bits (100), Expect = 8e-05
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +2
Query: 201 QRKNSQRFITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSIT 260
++ ++ F++ + Q+QQ ++L ++ PPP PPPPPP P P +TS
Sbjct: 80 EKNHTLTFLSLSLEWHQRQQHQPLSLSSAPPPP-----------PPPPPPHPPPASTSRP 226
Query: 261 PAGSEYNHG 269
P+ S ++ G
Sbjct: 227 PSASAHSGG 253
Score = 31.2 bits (69), Expect = 0.30
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 76 LKASSPPPPPTTTTTPHDP--STTPRPSPAACSAASSSR 112
L SS PPPP PH P ST+ PS +A S SR
Sbjct: 149 LSLSSAPPPPPPPPPPHPPPASTSRPPSASAHSGGWDSR 265
>BP072816
Length = 492
Score = 43.1 bits (100), Expect = 8e-05
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Frame = +1
Query: 19 PHHHHHHN--------------HHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQETLIL 64
PHHHHH + H+ PL H +P SSSS+P +
Sbjct: 13 PHHHHHSDSINKLNHIN*SNTHHNPPLSHQPCHSPSSSSSSSSP---------LPSPPTT 165
Query: 65 ITAKKLDDERRLKASSPPPPPTTT---TTPHDPSTTPRPSPAACSAASS 110
+ A A++ PPP T T T PST+ +P+ +A ASS
Sbjct: 166 LHAPSTSPSSAPSATAAPPPSTPTPAANTSSKPSTSSKPTTSAAPPASS 312
Score = 32.3 bits (72), Expect = 0.13
Identities = 20/62 (32%), Positives = 28/62 (44%)
Frame = +2
Query: 201 QRKNSQRFITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSIT 260
+R+ S P++QQ+ P + L P P HP P PPPPP PP +
Sbjct: 155 RRRRSMPLQHHRPPRRQQRPHPHLRL--QLPLPIHP------PSPPPPPSRLPPPHLPLR 310
Query: 261 PA 262
P+
Sbjct: 311 PS 316
Score = 29.6 bits (65), Expect = 0.87
Identities = 28/103 (27%), Positives = 40/103 (38%)
Frame = +1
Query: 5 STTPIPPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQETLIL 64
S++P+P PP + P +T P ++SS P K T
Sbjct: 133 SSSPLPSPPTTLHAPSTSPSSAPSATAAPPPSTPTPAANTSSKPSTSSKPT-----TSAA 297
Query: 65 ITAKKLDDERRLKASSPPPPPTTTTTPHDPSTTPRPSPAACSA 107
A L S+PP P P +PS+T P+PA+ SA
Sbjct: 298 PPASSL-------LSTPPKPAG---PPSNPSSTNSPAPASTSA 396
Score = 28.1 bits (61), Expect = 2.5
Identities = 19/47 (40%), Positives = 26/47 (54%), Gaps = 4/47 (8%)
Frame = +2
Query: 214 PQQQQQQQPLVTLVTSTPP--PQHPQP-LQAQ-PLPPPPPPPPQPPA 256
P+++++ PL PP Q P P L+ Q PLP PP PP PP+
Sbjct: 149 PRRRRRSMPLQH---HRPPRRQQRPHPHLRLQLPLPIHPPSPPPPPS 280
Score = 26.6 bits (57), Expect = 7.4
Identities = 17/55 (30%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Frame = +1
Query: 210 TTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPP--PPQPPATSITPA 262
+T TP +P TS+ P P + L PP P PP P+++ +PA
Sbjct: 226 STPTPAANTSSKPS----TSSKPTTSAAPPASSLLSTPPKPAGPPSNPSSTNSPA 378
>TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28040
{Arabidopsis thaliana;}, partial (8%)
Length = 937
Score = 42.7 bits (99), Expect = 1e-04
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 14/119 (11%)
Frame = -1
Query: 1 MTDPSTTPIPPP-PINIPDPHHHHHHNHHLPLLH-GTTTAPPLP-------SSSSAPRDY 51
+ +P+ PIPPP PI P P H LPLL + +PP P S P
Sbjct: 667 LLNPNPNPIPPPNPILSPTPTPTRPPPHPLPLLTLKSNPSPPSPWTRPRPTSPRLNPPRL 488
Query: 52 RKGNWTIQETLILITAKKLDDERRLKASSPPPPPTT-----TTTPHDPSTTPRPSPAAC 105
R + T + + RR + + PPPPP T P TTPR S C
Sbjct: 487 RPNRQPSAPPRAMPTPETPNGLRRRQLTRPPPPPLVPMRRWRRTGRSPGTTPRSSLRDC 311
Score = 32.7 bits (73), Expect = 0.10
Identities = 24/97 (24%), Positives = 39/97 (39%), Gaps = 10/97 (10%)
Frame = -1
Query: 175 NKQQRKDHNLPSNMVFEIYQA------ISDVLQRKNSQRFITTTTPQQQQQQQPLVTLV- 227
N QQ+K N P + + + + Q + + P P+++
Sbjct: 787 NTQQQKKKNFPQKKKVPLRRRRRMKPPLQPLRQPQPPTPNLLNPNPNPIPPPNPILSPTP 608
Query: 228 TSTPPPQHPQP---LQAQPLPPPPPPPPQPPATSITP 261
T T PP HP P L++ P PP P P+P + + P
Sbjct: 607 TPTRPPPHPLPLLTLKSNPSPPSPWTRPRPTSPRLNP 497
Score = 28.1 bits (61), Expect = 2.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 214 PQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQP 254
P+ + +QP + P P+ P L+ + L PPPPP P
Sbjct: 496 PRLRPNRQPSAP-PRAMPTPETPNGLRRRQLTRPPPPPLVP 377
Score = 27.7 bits (60), Expect = 3.3
Identities = 25/97 (25%), Positives = 41/97 (41%), Gaps = 16/97 (16%)
Frame = -3
Query: 36 TTAPPLPSSSSA----PRDYRKGNWTIQETLILITAKKLDDERRLKASSPPPPPTTT--- 88
TTAP P+++++ P+ + + Q + D ++ AS+P P P
Sbjct: 713 TTAPAPPAATTSHTKPPQPEPESDSATQSD----SESDTDSDQAPSASAPTPNPKVKPLA 546
Query: 89 ------TTPHDPSTTPRPSP---AACSAASSSRTSGE 116
T H P P P+P AA AA S+ +G+
Sbjct: 545 TKPMDQTQTHKPKAQPSPAPAKSAAKRAAESNANAGD 435
Score = 26.2 bits (56), Expect = 9.6
Identities = 23/105 (21%), Positives = 40/105 (37%), Gaps = 3/105 (2%)
Frame = -3
Query: 197 SDVLQRKNSQRFITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPA 256
SD +S + + + P + +PL T P+ AQP P P + A
Sbjct: 629 SDSESDTDSDQAPSASAPTPNPKVKPLATKPMDQTQTHKPK---AQPSPAPAKSAAKRAA 459
Query: 257 TSITPAGSEYNHGDQCVKEKTESSGSEQSDQEEN---NGSESSKR 298
S AG + V ++ + EE+ +G++S K+
Sbjct: 458 ESNANAGDSKRAKKKAVDSAPAAAAGSDEEMEEDGKKSGNDSKKQ 324
>AW428678
Length = 394
Score = 42.7 bits (99), Expect = 1e-04
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Frame = +2
Query: 10 PPPPINIPDPHHHHHH-----NHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQETLIL 64
PPPP IP P +++ + P H + PP PSSS+ P+
Sbjct: 53 PPPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSPPPPSPSSSTTPKT-------------- 190
Query: 65 ITAKKLDDERRLKASSP-PPPPTTTTTPHDPSTTPRPSPAACSAASSSRTSG 115
T K + RL ++P PP TTT T PR S A+ +SS+ +G
Sbjct: 191 TTNKSNPNTARLSHAAP*GSPPLLTTTSPPSVTAPRTSSASRLPSSSALDAG 346
Score = 29.3 bits (64), Expect = 1.1
Identities = 14/34 (41%), Positives = 16/34 (46%), Gaps = 1/34 (2%)
Frame = +2
Query: 229 STPPPQH-PQPLQAQPLPPPPPPPPQPPATSITP 261
S PPP P P PPPP P PP ++P
Sbjct: 50 SPPPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSP 151
Score = 27.3 bits (59), Expect = 4.3
Identities = 18/52 (34%), Positives = 24/52 (45%)
Frame = +3
Query: 210 TTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITP 261
TTT P Q+ L+ L+T HP L P P PPP + P ++P
Sbjct: 87 TTTNPLHHQRH--LLHLLTIM*VLLHPHHLLRPP--PKPPPTNRTPTRRVSP 230
Score = 27.3 bits (59), Expect = 4.3
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 21/54 (38%)
Frame = +2
Query: 229 STPPPQH-PQPLQAQPLP--------PPPP------------PPPQPPATSITP 261
S PPP + P P+P PPPP PPP P++S TP
Sbjct: 23 SPPPPYYYKSPPPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSPPPPSPSSSTTP 184
Score = 27.3 bits (59), Expect = 4.3
Identities = 15/43 (34%), Positives = 19/43 (43%), Gaps = 5/43 (11%)
Frame = +2
Query: 229 STPPPQHPQPLQAQPLPPPPPPPP-----QPPATSITPAGSEY 266
++P P P ++ P P P P PP PP TS P Y
Sbjct: 14 ASPSPPPPYYYKSPPPPSPIPHPPYYYKSPPPPTSSPPPPYHY 142
Score = 26.6 bits (57), Expect = 7.4
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
Frame = +2
Query: 240 QAQPLPPPP-----PPPPQP 254
+A P PPPP PPPP P
Sbjct: 11 RASPSPPPPYYYKSPPPPSP 70
Score = 26.6 bits (57), Expect = 7.4
Identities = 11/24 (45%), Positives = 13/24 (53%)
Frame = +2
Query: 77 KASSPPPPPTTTTTPHDPSTTPRP 100
+AS PPPP +P PS P P
Sbjct: 11 RASPSPPPPYYYKSPPPPSPIPHP 82
>TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein), partial (6%)
Length = 1003
Score = 42.7 bits (99), Expect = 1e-04
Identities = 37/106 (34%), Positives = 46/106 (42%)
Frame = +1
Query: 5 STTPIPPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQETLIL 64
+TT PPP + P P +TT PP PS + N + Q T
Sbjct: 121 TTTVKLPPP*SPSSPSSSSLSPWLSPSPPSSTTPPPPPSHRT-----NNNNLSTQPTPSA 285
Query: 65 ITAKKLDDERRLKASSPPPPPTTTTTPHDPSTTPRPSPAACSAASS 110
+A L R AS P PPPTTT H+PS+ PSP+A SS
Sbjct: 286 PSATSLAS--RTPASPPSPPPTTTPPTHNPSS---PSPSAPPWTSS 408
Score = 33.1 bits (74), Expect = 0.079
Identities = 23/84 (27%), Positives = 33/84 (38%)
Frame = +1
Query: 202 RKNSQRFITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITP 261
RK + TTTT + + T PPP P + L P P P P +T+ P
Sbjct: 52 RKKNTTTTTTTTTTSKTNNNAINTTTVKLPPP*SPSSPSSSSLSPWLSPSP-PSSTTPPP 228
Query: 262 AGSEYNHGDQCVKEKTESSGSEQS 285
S + + + T S+ S S
Sbjct: 229 PPSHRTNNNNLSTQPTPSAPSATS 300
Score = 31.6 bits (70), Expect = 0.23
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = +1
Query: 201 QRKNSQRFITTTTPQQQQQQQPLVTLVTSTPP--PQHPQPLQAQPLPPPPPP----PPQP 254
++KN+ TTTT + T V PP P P P P PP PP P
Sbjct: 52 RKKNTTTTTTTTTTSKTNNNAINTTTVKLPPP*SPSSPSSSSLSPWLSPSPPSSTTPPPP 231
Query: 255 PA 256
P+
Sbjct: 232 PS 237
Score = 28.1 bits (61), Expect = 2.5
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = +1
Query: 202 RKNSQRFITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLP---PPPPPPPQPPATS 258
R N+ T TP P T + S P P P P P P P PP TS
Sbjct: 241 RTNNNNLSTQPTPSA-----PSATSLASRTPASPPSPPPTTTPPTHNPSSPSPSAPPWTS 405
Query: 259 ITPA 262
P+
Sbjct: 406 SPPS 417
Score = 27.7 bits (60), Expect(2) = 0.009
Identities = 23/83 (27%), Positives = 35/83 (41%), Gaps = 7/83 (8%)
Frame = +3
Query: 148 DYKKVRDYESKSESKDHNYNFPSYWTLNKQQRKD---HNLPSNMVFEIYQAISDVLQRKN 204
D KV K E + HN++ + L QQ+++ H S + I + L
Sbjct: 15 DTVKVLKGYGKVEEEKHNHHHHHHHNLEDQQQRNQHHHRKASTAIISILAILFFTLALAF 194
Query: 205 SQRFI----TTTTPQQQQQQQPL 223
+ + TTTT +QQQPL
Sbjct: 195 TLATLLHHTTTTTKPPHKQQQPL 263
Score = 27.3 bits (59), Expect = 4.3
Identities = 17/39 (43%), Positives = 24/39 (60%), Gaps = 2/39 (5%)
Frame = +1
Query: 78 ASSPPPPPTT-TTTPHDPSTTPRPS-PAACSAASSSRTS 114
+S+ PPPP + T ++ ST P PS P+A S AS + S
Sbjct: 208 SSTTPPPPPSHRTNNNNLSTQPTPSAPSATSLASRTPAS 324
Score = 27.3 bits (59), Expect(2) = 0.009
Identities = 14/37 (37%), Positives = 18/37 (47%), Gaps = 3/37 (8%)
Frame = +1
Query: 228 TSTPPPQHPQPLQAQPLPPPPP---PPPQPPATSITP 261
T+TPP +P + P P PP PP PP + P
Sbjct: 343 TTTPPTHNP----SSPSPSAPPWTSSPPSPPRSESRP 441
Score = 27.3 bits (59), Expect = 4.3
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 18 DPHHHHHHNHH 28
+ H+HHHH+HH
Sbjct: 57 EKHNHHHHHHH 89
Score = 26.2 bits (56), Expect = 9.6
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 13/47 (27%)
Frame = +1
Query: 228 TSTPPPQH---PQPLQAQPLPP----------PPPPPPQPPATSITP 261
T PPP H L QP P P PP PP T+ P
Sbjct: 217 TPPPPPSHRTNNNNLSTQPTPSAPSATSLASRTPASPPSPPPTTTPP 357
>BP056337
Length = 550
Score = 42.4 bits (98), Expect = 1e-04
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 214 PQQQQQQQ--PLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITPAGS 264
P QQQQ L +TPPP P PL + P P P P PP++ TP+ S
Sbjct: 331 PNQQQQTTHFDFQKLFKATPPPSIPNPLNSSPSFPAPSPSTPPPSSYPTPSSS 489
>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
Length = 505
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +3
Query: 6 TTPIPPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQETLILI 65
TTP PPPP P P+H ++ P T+ + P+S P + + T
Sbjct: 66 TTPPPPPPP--PSPNHRNNLPPPFPPSLTTSFSTSSPASHPLPSLPSPSSAAVGPTSSTP 239
Query: 66 TAKKLDDERRLKASSPPPP--PTTTTTPHDPSTTPRPSPAACSAASSSRTS 114
+++PP P P T+ +P PS+TP +P + S A++ S
Sbjct: 240 PTSPTSAAAATSSATPPSPSPPPTSASPPPPSSTPNGTPPSSSPATTPSPS 392
Score = 37.7 bits (86), Expect = 0.003
Identities = 18/34 (52%), Positives = 19/34 (54%)
Frame = +1
Query: 222 PLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPP 255
PL L PPP P P +P PPPPPPPP P
Sbjct: 196 PLPRLPPLVPPP--PLPRLLRPPPPPPPPPPLRP 291
Score = 36.2 bits (82), Expect = 0.009
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +1
Query: 222 PLVTLVTSTPPPQHPQPLQAQPLP----PPPPPPPQPP 255
P TL P P+ P + PLP PPPPPPP PP
Sbjct: 169 PRPTLFPPFPLPRLPPLVPPPPLPRLLRPPPPPPPPPP 282
Score = 33.9 bits (76), Expect = 0.046
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +3
Query: 210 TTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATS--ITPAGSEYN 267
T++TP T ++TPP P P A P PP P PP++S TP+ S +
Sbjct: 225 TSSTPPTSPTSAAAATS-SATPPSPSPPPTSASPPPPSSTPNGTPPSSSPATTPSPSRPS 401
Query: 268 HGDQCVKEKTESSGSEQSDQE 288
+ S+ S +E
Sbjct: 402 TPSSPTRASLPSAPGFSSSEE 464
Score = 32.7 bits (73), Expect = 0.10
Identities = 36/150 (24%), Positives = 49/150 (32%), Gaps = 32/150 (21%)
Frame = +3
Query: 1 MTDPSTTPIPPPPINIPDPHHHHHHNHHLPLLHGTTTA-----------PPLPSSSSA-- 47
+ P T PPPP P P +H +N P TT+ P LPS SSA
Sbjct: 48 LVSPIQTTPPPPP---PPPSPNHRNNLPPPFPPSLTTSFSTSSPASHPLPSLPSPSSAAV 218
Query: 48 -PRDYRKGNWTIQETLILITAKKLDDERRLKASSPPPP------------------PTTT 88
P +A ++SPPPP P+
Sbjct: 219 GPTSSTPPTSPTSAAAATSSATPPSPSPPPTSASPPPPSSTPNGTPPSSSPATTPSPSRP 398
Query: 89 TTPHDPSTTPRPSPAACSAASSSRTSGELR 118
+TP P+ PS S++ + G R
Sbjct: 399 STPSSPTRASLPSAPGFSSSEETPRCGTTR 488
Score = 31.6 bits (70), Expect = 0.23
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 220 QQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPP 252
++ TL TS P+Q P PPPPPP P
Sbjct: 3 REKAATLATSHGS*NLVSPIQTTPPPPPPPPSP 101
Score = 30.4 bits (67), Expect = 0.51
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 228 TSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITPA 262
T PPP P P LPPP PP ++ +PA
Sbjct: 69 TPPPPPPPPSPNHRNNLPPPFPPSLTTSFSTSSPA 173
>TC8205 similar to UP|Q94JW1 (Q94JW1) AT3g15820/MSJ11_22, partial (82%)
Length = 1379
Score = 42.0 bits (97), Expect = 2e-04
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = +1
Query: 10 PPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQETLILITAKK 69
P PI + PHHH + + L T APPLP + P G T + L+L+ +
Sbjct: 157 PHFPIYMRFPHHHVFDTNRI-LSQP*TAAPPLPPVT--PPSSTTGAPTKHQHLLLL-PPQ 324
Query: 70 LDDERRLKASSPPPPPTTTTTP---HDPSTTPRPSP-----AACSAASSSRTSGELRWKW 121
+ R+ + PPP TTT P + PS T SP ACSA++SS + W+W
Sbjct: 325 IPPWRK----ASPPPCTTTLKPPS*NGPSPTRSTSPRTIGYLACSASASSSS-----WRW 477
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 41.6 bits (96), Expect = 2e-04
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPP 255
PPP +P P PLPP PPPPP PP
Sbjct: 445 PPPPYPPPPP*PPLPPYPPPPPYPP 371
Score = 40.4 bits (93), Expect = 5e-04
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPP-PPPPQPPATSITP 261
PPP+ P P P PPPP PPPP+PP + P
Sbjct: 373 PPPRPPPP*PPPPYPPPP*PPPPRPPPPAPPP 278
Score = 39.7 bits (91), Expect = 8e-04
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPP 255
PPP P P P PPPPP PP PP
Sbjct: 472 PPPPRPPPRPPPPYPPPPP*PPLPP 398
Score = 37.7 bits (86), Expect = 0.003
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPP 255
PPP PL P PPP PPPP+PP
Sbjct: 430 PPPPP*PPLPPYPPPPPYPPPPRPP 356
Score = 37.4 bits (85), Expect = 0.004
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 12/47 (25%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQ---------PPATSIT---PAGSE 265
PPP P P P PPPP PPP+ P TSI P+GSE
Sbjct: 343 PPPYPPPP*PPPPRPPPPAPPPRRVPCTAWPLGPVTSIALARPSGSE 203
Score = 36.2 bits (82), Expect = 0.009
Identities = 16/26 (61%), Positives = 17/26 (64%), Gaps = 1/26 (3%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPP-PPPPQPP 255
PPP +P P P PPPP PPPP PP
Sbjct: 391 PPPPYPPP----PRPPPP*PPPPYPP 326
Score = 35.8 bits (81), Expect = 0.012
Identities = 24/70 (34%), Positives = 29/70 (41%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPPATSITPAGSEYNHGDQCVKEKTESSGSEQSDQEEN 290
PPP P P P PPPP PPP P P + + G SGSE + +
Sbjct: 358 PPP*PPPPYPPPP*PPPPRPPPPAPPPRRVPC-TAWPLGPVTSIALARPSGSEAT--MNS 188
Query: 291 NGSESSKRRK 300
S S + RK
Sbjct: 187 TSSPSPRHRK 158
Score = 34.7 bits (78), Expect = 0.027
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPP--PPPPQPPATSITPA 262
PPP P P P PPPP PPP PP PA
Sbjct: 388 PPPYPPPPRPPPP*PPPPYPPPP*PPPPRPPPPA 287
Score = 33.1 bits (74), Expect = 0.079
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPPATSITP 261
PPP P+P P PPPP PP PP + P
Sbjct: 478 PPPPPPRP----PPRPPPPYPPPPP*PPLPP 398
Score = 26.9 bits (58), Expect = 5.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 241 AQPLPPPPPPPPQPP 255
A P PPP PPP PP
Sbjct: 481 APPPPPPRPPPRPPP 437
>TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-binding,
abscisic acid-inducible protein, complete
Length = 972
Score = 41.6 bits (96), Expect = 2e-04
Identities = 15/26 (57%), Positives = 18/26 (68%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPPA 256
PPP +P + P PPPPPPPP+P A
Sbjct: 666 PPPPYPPSRRPPPYPPPPPPPPRPRA 589
Score = 36.2 bits (82), Expect = 0.009
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 5/38 (13%)
Frame = -1
Query: 229 STPPPQHPQPLQAQPLPPPP-----PPPPQPPATSITP 261
S PP P PL P PPPP PPPP PP+ P
Sbjct: 741 SRRPPYPPPPLPP*PPPPPPL*RLPPPPPYPPSRRPPP 628
Score = 34.7 bits (78), Expect = 0.027
Identities = 16/36 (44%), Positives = 17/36 (46%), Gaps = 4/36 (11%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQ----PPATSITPA 262
PPP P PLPP PPPPP PP P+
Sbjct: 750 PPPSRRPPYPPPPLPP*PPPPPPL*RLPPPPPYPPS 643
Score = 34.3 bits (77), Expect = 0.035
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 232 PPQHPQPLQAQPLPPPPPPPPQP 254
PP P P +P P PPPPPP P
Sbjct: 669 PPPPPYPPSRRPPPYPPPPPPPP 601
Score = 32.0 bits (71), Expect = 0.18
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPP 255
PP P P + P PPPP PP PP
Sbjct: 765 PP*PPPPPSRRPPYPPPPLPP*PPP 691
Score = 28.9 bits (63), Expect = 1.5
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPP-------PPQPP 255
PPP P PL P PPP PP PP PP
Sbjct: 699 PPP--PPPL*RLPPPPPYPPSRRPPPYPPPPP 610
Score = 28.1 bits (61), Expect = 2.5
Identities = 12/22 (54%), Positives = 13/22 (58%), Gaps = 2/22 (9%)
Frame = -1
Query: 236 PQPLQAQPLPPPPPP--PPQPP 255
P P + P PPPPP PP PP
Sbjct: 783 PPPSRLPP*PPPPPSRRPPYPP 718
Score = 26.9 bits (58), Expect = 5.6
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPPPPPPP--QPP 255
PP + P LPP PPPPP +PP
Sbjct: 807 PPLE*RDPPPPSRLPP*PPPPPSRRPP 727
Score = 26.2 bits (56), Expect = 9.6
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Frame = -1
Query: 231 PPPQHPQPLQAQPLPPP---P--PPPPQPP 255
PPP P L P PPP P PPPP PP
Sbjct: 786 PPP--PSRLPP*PPPPPSRRPPYPPPPLPP 703
>TC13980 similar to UP|Q9SGT0 (Q9SGT0) T6H22.18 protein (F14J16.33), partial
(12%)
Length = 565
Score = 41.6 bits (96), Expect = 2e-04
Identities = 21/35 (60%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 229 STPPPQHPQPLQAQPL--PPPPPPPPQPPATSITP 261
ST P HP P Q QP PPPPPPPP P A S P
Sbjct: 380 STSNPPHPPP-QQQPFSPPPPPPPPPSPTAPSSHP 481
Score = 33.5 bits (75), Expect = 0.060
Identities = 17/37 (45%), Positives = 24/37 (63%), Gaps = 2/37 (5%)
Frame = +2
Query: 80 SPPPPPTTTTTPHDPSTTPR--PSPAACSAASSSRTS 114
SPPPPP +P PS+ PR +PAA +S+S++S
Sbjct: 425 SPPPPPPPPPSPTAPSSHPRLPAAPAAGRISSASKSS 535
Score = 30.8 bits (68), Expect = 0.39
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Frame = +2
Query: 212 TTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPP------PPPPPQPPATSITPA 262
T+ + P +S+P P PPP PPPPP PP + P+
Sbjct: 302 TSSSASKTPSPCSPPTSSSPTGSSSHSTSNPPHPPPQQQPFSPPPPPPPPPSPTAPS 472
Score = 29.6 bits (65), Expect = 0.87
Identities = 13/34 (38%), Positives = 17/34 (49%)
Frame = +2
Query: 81 PPPPPTTTTTPHDPSTTPRPSPAACSAASSSRTS 114
PPPPP+ T P P+ S+AS S T+
Sbjct: 440 PPPPPSPTAPSSHPRLPAAPAAGRISSASKSSTT 541
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 229 STPPPQHPQPLQAQPLPPPPPPPPQPPATSITPAGS 264
STPPP P P P PPPP PPA + PA S
Sbjct: 404 STPPPASPPPFSPPPATPPPPAATPPPALTPVPATS 511
Score = 37.7 bits (86), Expect = 0.003
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +2
Query: 211 TTTPQQQQQQQPLVTLVTSTPPPQH--PQPLQAQPLPPPPPPPPQ---PPATSITPAGS 264
TT+P P S+PPP P P+Q+ P P PPP Q PP +S P S
Sbjct: 206 TTSPAPPTPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQS 382
Score = 37.0 bits (84), Expect = 0.005
Identities = 26/62 (41%), Positives = 29/62 (45%), Gaps = 10/62 (16%)
Frame = +2
Query: 210 TTTTPQQQQQQ------QPLVTLVTSTPPP-QHPQPLQAQPLPPPPPPPPQ---PPATSI 259
T TTPQ Q Q V S+PPP P P Q+ P P PPP Q PPA +
Sbjct: 227 TPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPAS 406
Query: 260 TP 261
TP
Sbjct: 407 TP 412
Score = 36.2 bits (82), Expect = 0.009
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 211 TTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPP--QPPATSITPAGS 264
+T P Q P V+S PP Q P PPP PPP PPAT PA +
Sbjct: 320 STPPPAQSSPPP----VSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAAT 475
Score = 35.4 bits (80), Expect = 0.016
Identities = 24/56 (42%), Positives = 27/56 (47%), Gaps = 5/56 (8%)
Frame = +2
Query: 212 TTPQQQQQQQPLVTL---VTSTPPPQHPQ-PLQAQPLP-PPPPPPPQPPATSITPA 262
+TP Q P V+ V STPPP P A P P PPP P PPA + PA
Sbjct: 320 STPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAATPPPA 487
Score = 30.8 bits (68), Expect = 0.39
Identities = 29/113 (25%), Positives = 42/113 (36%), Gaps = 7/113 (6%)
Frame = +2
Query: 4 PSTTPIP----PPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQ 59
P++TP P PPP++ P P +T PP P+S+ P
Sbjct: 314 PASTPPPAQSSPPPVSSPPPVQ--------------STPPPAPASTPPPAS--------- 424
Query: 60 ETLILITAKKLDDERRLKASSPPPP---PTTTTTPHDPSTTPRPSPAACSAAS 109
++PPPP P TP P+T+P P+PA + S
Sbjct: 425 -----------PPPFSPPPATPPPPAATPPPALTP-VPATSPAPAPAKVKSKS 547
Score = 30.4 bits (67), Expect = 0.51
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +2
Query: 209 ITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITPA 262
+ +T P P + +PPP P P P PPP PATS PA
Sbjct: 374 VQSTPPPAPASTPPPASPPPFSPPPATPPP----PAATPPPALTPVPATSPAPA 523
Score = 30.0 bits (66), Expect = 0.67
Identities = 24/101 (23%), Positives = 38/101 (36%), Gaps = 3/101 (2%)
Frame = +2
Query: 4 PSTTPIPPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWTIQETLI 63
P+T+P PP P T P P++ S+P + +Q +
Sbjct: 203 PTTSPAPPTP-----------------------TTPQPPAAQSSPPPAQSSPPPVQSS-- 307
Query: 64 LITAKKLDDERRLKASSPP---PPPTTTTTPHDPSTTPRPS 101
++S PP PPP +T P P++TP P+
Sbjct: 308 ---PPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPA 421
Score = 28.9 bits (63), Expect = 1.5
Identities = 15/51 (29%), Positives = 24/51 (46%)
Frame = +2
Query: 212 TTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITPA 262
T P P +T V +T P P ++++ P P P P P S++P+
Sbjct: 452 TPPPPAATPPPALTPVPATSPAPAPAKVKSKS-PAPAPAPALAPVVSLSPS 601
Score = 28.5 bits (62), Expect = 1.9
Identities = 13/39 (33%), Positives = 18/39 (45%)
Frame = +2
Query: 223 LVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATSITP 261
L+ +V ++ Q P PP P PQPPA +P
Sbjct: 152 LICIVIASVGAQSPSNSPTTSPAPPTPTTPQPPAAQSSP 268
Score = 27.3 bits (59), Expect = 4.3
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 62 LILITAKKLDDERRLKASSPPPPPTTTTTPHDPSTTPRPSPAACS 106
LI I + + + + P P T TTP P+ P PA S
Sbjct: 152 LICIVIASVGAQSPSNSPTTSPAPPTPTTPQPPAAQSSPPPAQSS 286
>CB828813
Length = 465
Score = 41.2 bits (95), Expect = 3e-04
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +1
Query: 199 VLQRKNSQRFITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATS 258
+ Q N++ ITTT ++T P P A PPPPPPPP P TS
Sbjct: 94 ISQTNNNRTTITTTLYWMTPPPNLTPPILTKPHPIGSTTPFSALTTPPPPPPPPTPTRTS 273
Query: 259 IT 260
T
Sbjct: 274 ST 279
Score = 36.6 bits (83), Expect = 0.007
Identities = 20/53 (37%), Positives = 22/53 (40%), Gaps = 2/53 (3%)
Frame = +1
Query: 212 TTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPL--PPPPPPPPQPPATSITPA 262
T P P L T PPP P P + PP P PPP P S +PA
Sbjct: 181 TKPHPIGSTTPFSALTTPPPPPPPPTPTRTSSTSKPPIPTPPPPNPPPSGSPA 339
Score = 35.8 bits (81), Expect = 0.012
Identities = 24/86 (27%), Positives = 35/86 (39%), Gaps = 10/86 (11%)
Frame = +1
Query: 190 FEIYQAISDVLQRKNSQRFITTTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLP---- 245
F +++ + K SQ I+ T + TL TPPP P+ +P P
Sbjct: 37 FSLWRTTTTTTSLKTSQFTISQTN---NNRTTITTTLYWMTPPPNLTPPILTKPHPIGST 207
Query: 246 ------PPPPPPPQPPATSITPAGSE 265
PPPPP PP + T + S+
Sbjct: 208 TPFSALTTPPPPPPPPTPTRTSSTSK 285
Score = 29.6 bits (65), Expect = 0.87
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 2 TDPSTTPIPPPPINIPDPHHHHHHNH 27
+ P+ T + + P HHHHHH+H
Sbjct: 176 SSPNRTQLAQQRPSPPSLHHHHHHHH 253
Score = 29.6 bits (65), Expect = 0.87
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 211 TTTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPP 252
TT P P T TS PP P PPPP PPP
Sbjct: 226 TTPPPPPPPPTPTRTSSTSKPPI---------PTPPPPNPPP 324
Score = 29.3 bits (64), Expect = 1.1
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 24/60 (40%)
Frame = +2
Query: 4 PSTTPIPPPPINIPDPHH------------------------HHHHNHHLPLLHGTTTAP 39
P+TT P PP +I PHH HHHH+HH H P
Sbjct: 104 PTTTGPP*PPPSIG*PHHQT*LLRSSPNRTQLAQQRPSPPSLHHHHHHHHQRQHELPQPP 283
Score = 28.5 bits (62), Expect = 1.9
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Frame = +1
Query: 35 TTTAPPLPSSSSAPRDYRKGNWTIQETLILITAKKLDDERRLKASSPP----PPPTTTTT 90
TTT L +S TI TL +T +PP P P +TT
Sbjct: 55 TTTTTSLKTSQFTISQTNNNRTTITTTLYWMTPPP--------NLTPPILTKPHPIGSTT 210
Query: 91 PHDPSTTPRPSPAACSAASSSRTS 114
P TTP P P + +S TS
Sbjct: 211 PFSALTTPPPPPPPPTPTRTSSTS 282
Score = 28.1 bits (61), Expect(2) = 0.007
Identities = 12/27 (44%), Positives = 13/27 (47%)
Frame = +1
Query: 76 LKASSPPPPPTTTTTPHDPSTTPRPSP 102
L PPPPP T T S P P+P
Sbjct: 223 LTTPPPPPPPPTPTRTSSTSKPPIPTP 303
Score = 27.3 bits (59), Expect(2) = 0.007
Identities = 13/28 (46%), Positives = 14/28 (49%)
Frame = +3
Query: 12 PPINIPDPHHHHHHNHHLPLLHGTTTAP 39
P + D HHNHH PLL TT P
Sbjct: 84 PIHHFSDQQQQDHHNHH-PLLDDPTTKP 164
Score = 26.2 bits (56), Expect(2) = 0.19
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +2
Query: 10 PPPPINIPDPHHHHHHNHHLPLLHGTTTAPPLPSSS 45
PPPP++ P + P L TTT PP P S
Sbjct: 59 PPPPLSRPP---------NSPFLRPTTTGPP*PPPS 139
Score = 24.3 bits (51), Expect(2) = 0.19
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 10/33 (30%)
Frame = +1
Query: 81 PPPPPT-TTT---------TPHDPSTTPRPSPA 103
PPPPPT T T TP P+ P SPA
Sbjct: 241 PPPPPTPTRTSSTSKPPIPTPPPPNPPPSGSPA 339
>BP042651
Length = 534
Score = 40.4 bits (93), Expect = 5e-04
Identities = 36/114 (31%), Positives = 45/114 (38%), Gaps = 13/114 (11%)
Frame = +1
Query: 9 IPPPPINIPDPHHHH--------HHNHHLPLLHGTTTAPPLPSSSSAPRDYRKGNWT--- 57
I P P IP PHHHH HH H PL S S + + K WT
Sbjct: 88 ISP*PTPIPFPHHHHQPR*SNKQHHPHTSPL-----------SQSQSIEEIIKQ*WTPRI 234
Query: 58 --IQETLILITAKKLDDERRLKASSPPPPPTTTTTPHDPSTTPRPSPAACSAAS 109
+ T ++ E++ KAS P TT T P+ P P+ AA A S
Sbjct: 235 IPRRSTTTTLSPPPPRPEKKWKAS--PSTTTTATARFCPAVNPTPTTAAS*ALS 390
>AW720113
Length = 512
Score = 40.4 bits (93), Expect = 5e-04
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +1
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQ 253
PPP P P Q QP PPPPPPPPQ
Sbjct: 115 PPPPLPPP-QPQPQPPPPPPPPQ 180
Score = 26.2 bits (56), Expect(2) = 1.1
Identities = 7/9 (77%), Positives = 9/9 (99%)
Frame = +2
Query: 20 HHHHHHNHH 28
HH+H+HNHH
Sbjct: 134 HHNHNHNHH 160
Score = 21.6 bits (44), Expect(2) = 1.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 4 PSTTPIPPPPINIPDP 19
PS PPPP+ P P
Sbjct: 97 PSPLDPPPPPLPPPQP 144
>TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%)
Length = 1751
Score = 37.7 bits (86), Expect = 0.003
Identities = 22/65 (33%), Positives = 29/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 222 PLVTLVTSTPPPQHPQPLQAQPLPPPPPP---PPQPPATSITPAGSEY-NHGDQCVKEKT 277
P ++ + P P +P P A PPP P PP PP+T +T G C T
Sbjct: 138 PSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGPTVPRRKPFCSMAAT 317
Query: 278 ESSGS 282
S+GS
Sbjct: 318 SSTGS 332
Score = 35.8 bits (81), Expect = 0.012
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 212 TTPQQQQQQQPLVTLVTSTPPPQHPQPLQAQPLPPPPPPPPQPPATS 258
++PQ+ + L + P P L PL PPPP PP PP+ S
Sbjct: 9 SSPQRWLHRSSLASFPKPEP*T*LPSSLAPSPLQPPPPLPPSPPSLS 149
Score = 33.5 bits (75), Expect = 0.060
Identities = 34/124 (27%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Frame = +3
Query: 7 TPIPPPPINIPDPHHHHHHNHHLPLLHGTTT--APPLPSSSSAPRDYRKGNWTIQETLIL 64
+P+ PPP P P P L T +PP PS +A
Sbjct: 99 SPLQPPPPLPPSP----------PSLSSAATVPSPPYPSPPAA----------------- 197
Query: 65 ITAKKLDDERRLKASSPPPPPTTTTTPHDPS--------TTPRPSPAACSAASSSRTSGE 116
SSPPP P+ P PS T PR P AA+SS +G
Sbjct: 198 -------------TSSPPPAPSPPAPPPPPSTILTLTGPTVPRRKPFCSMAATSS--TGS 332
Query: 117 LRWK 120
L W+
Sbjct: 333 LSWR 344
Score = 31.6 bits (70), Expect = 0.23
Identities = 18/44 (40%), Positives = 23/44 (51%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 MTDPSTTPIPPPPINIPD-PHHHHHHNHHLPLLHGTTTAPPLPS 43
++ PS P P P + P H +HH+H LPL PPLPS
Sbjct: 40 LSRPSQNPNPKPSSLLHSLPLHFNHHHHSLPL--RPLFPPPLPS 165
Score = 28.9 bits (63), Expect = 1.5
Identities = 31/112 (27%), Positives = 43/112 (37%), Gaps = 14/112 (12%)
Frame = +3
Query: 231 PPPQHPQP---LQAQPLPPP-----------PPPPPQPPATSITPAGSEYNHGDQCVKEK 276
PPP P P A +P P PPP P PPA P+ G + K
Sbjct: 114 PPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGPTVPRRK 293
Query: 277 TESSGSEQSDQEENNGSESSKRRKVRNIGSSIMRSASVLARALRSCEEKKEK 328
S + S + GS S + KV +G ++ S + LR E K++
Sbjct: 294 PFCSMAATS----STGSLSWRSPKVTQLG--MISSMDISKHWLRLSEVSKKR 431
Score = 26.9 bits (58), Expect = 5.6
Identities = 13/32 (40%), Positives = 16/32 (49%)
Frame = +3
Query: 231 PPPQHPQPLQAQPLPPPPPPPPQPPATSITPA 262
P P PLQ P PP PP PP + + P+
Sbjct: 81 PSSLAPSPLQ--PPPPLPPSPPSLSSAATVPS 170
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.310 0.126 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,108,599
Number of Sequences: 28460
Number of extensions: 300212
Number of successful extensions: 21738
Number of sequences better than 10.0: 1623
Number of HSP's better than 10.0 without gapping: 6067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14251
length of query: 381
length of database: 4,897,600
effective HSP length: 92
effective length of query: 289
effective length of database: 2,279,280
effective search space: 658711920
effective search space used: 658711920
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0311.7