BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0302b.3
(234 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP030058 48 2e-06
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 48 2e-06
TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycop... 46 5e-06
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 46 6e-06
TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding p... 44 2e-05
AW164126 44 2e-05
TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein... 44 2e-05
TC19458 weakly similar to UP|Q9STE8 (Q9STE8) Chloroplast import-... 44 3e-05
AV427333 43 5e-05
TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-bindi... 42 7e-05
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 42 7e-05
TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomeras... 42 7e-05
BP043633 42 1e-04
AV410227 42 1e-04
TC7947 similar to UP|Q9ST69 (Q9ST69) Ribosomal protein S5, parti... 41 2e-04
TC14729 homologue to UP|Q8W590 (Q8W590) At2g32080/F22D22.17, par... 41 2e-04
TC19911 weakly similar to PIR|A44805|A44805 eggshell protein pre... 41 2e-04
TC7861 similar to UP|AAR86686 (AAR86686) Proline dehydrogenase ... 41 2e-04
TC19908 similar to GB|CAA60022.1|791150|VURNEXT26 extensin-like ... 41 2e-04
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 40 3e-04
>BP030058
Length = 455
Score = 47.8 bits (112), Expect = 2e-06
Identities = 24/49 (48%), Positives = 25/49 (50%), Gaps = 10/49 (20%)
Frame = +1
Query: 195 GGGDMEID----------GNSGGGGGGDDGSGSGGDEGGCGGGDGVGGG 233
GGGD + G GGGGGG DG G GGD G GGG G G G
Sbjct: 250 GGGDKGLQFCGQEGYFGGGGEGGGGGGGDGGGGGGDGHGSGGGGGEGDG 396
Score = 44.3 bits (103), Expect = 2e-05
Identities = 23/39 (58%), Positives = 24/39 (60%)
Frame = +1
Query: 195 GGGDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGDGVGGG 233
GGG+ G GGGGG DG GSG GG G GDG GGG
Sbjct: 301 GGGEGGGGGGGDGGGGGGDGHGSG---GGGGEGDGGGGG 408
Score = 40.4 bits (93), Expect = 3e-04
Identities = 20/35 (57%), Positives = 21/35 (59%)
Frame = +1
Query: 195 GGGDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGDG 229
GGG G+ GGGGG GSG GG EG GGG G
Sbjct: 322 GGG-----GDGGGGGGDGHGSGGGGGEGDGGGGGG 411
Score = 38.1 bits (87), Expect = 0.001
Identities = 29/92 (31%), Positives = 36/92 (38%), Gaps = 6/92 (6%)
Frame = +1
Query: 143 GCWRVVVVLESGD------CGCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGG 196
GC ++L G CG G G G+ GG G G+G GG
Sbjct: 220 GCPGTYMILGGGGDKGLQFCGQEGYFGGGGEGGGGGG-----GDG-------------GG 345
Query: 197 GDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGD 228
G + G+ GGGG GD G G G + G D
Sbjct: 346 GGGDGHGSGGGGGEGDGGGGGGSPQVSPQGHD 441
Score = 30.8 bits (68), Expect = 0.21
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +1
Query: 208 GGGGDDGSGSGGDEGGCGGGDGVGGG 233
GGGGD G G EG GGG GGG
Sbjct: 247 GGGGDKGLQFCGQEGYFGGGGEGGGG 324
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 47.8 bits (112), Expect = 2e-06
Identities = 30/74 (40%), Positives = 32/74 (42%)
Frame = +3
Query: 160 GSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSGG 219
G+ RG G GG G G G+ GGG G G GGGG G G G
Sbjct: 267 GTRRGGGAGGGGRGGGGYGGGGY------------GGGGY---GGGGRGGGGYGGGGGYG 401
Query: 220 DEGGCGGGDGVGGG 233
GG GGG G GGG
Sbjct: 402 GSGGYGGGGGYGGG 443
Score = 39.3 bits (90), Expect = 6e-04
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 190 ADDACGGGDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGDGVGGG 233
A + G + G GGG G G G GG GG GG G GGG
Sbjct: 228 AIEVTGPNGQAVQGTRRGGGAGGGGRGGGGYGGGGYGGGGYGGG 359
Score = 35.4 bits (80), Expect = 0.009
Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 196 GGDMEIDGNSGGG-GGGDDGSGSGGDEGGCGGGDGVGGGW 234
GG G GGG GGG G G G G GGG G GGG+
Sbjct: 279 GGGAGGGGRGGGGYGGGGYGGGGYGGGGRGGGGYGGGGGY 398
>TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (57%)
Length = 941
Score = 46.2 bits (108), Expect = 5e-06
Identities = 41/111 (36%), Positives = 44/111 (38%), Gaps = 40/111 (36%)
Frame = -1
Query: 164 GDGDNEGGDGDA-----CENGEG------WWEAAVEVADDACGGGDM------------- 199
G GD EGG GDA +GEG W DD GGGD+
Sbjct: 461 GAGDGEGGGGDA*WYGGGGDGEGGGGLT*W*GGG---GDDVGGGGDL***GG*GMGDGGG 291
Query: 200 --------EIDGNSGGG-----GGGDDGSGSGGDE---GGCGGGDGVGGGW 234
DG+ GGG GGG DG G GGD GG G DG GG W
Sbjct: 290 GLL**YGGGGDGDGGGGDL***GGGGDGDGGGGDL***GGGGECDGGGGDW 138
Score = 45.1 bits (105), Expect = 1e-05
Identities = 33/81 (40%), Positives = 37/81 (44%), Gaps = 11/81 (13%)
Frame = -1
Query: 164 GDGDNEGGDGDACENGEGWWEAAVEVADDACGGGD--MEIDGNSGGGGGGDD---GSGSG 218
G G+ EGG GD G G + GGGD M + G GGGGD G G
Sbjct: 557 GAGEGEGGGGDV*WYGGG--------GNFTGGGGDL*MYVGAGDGEGGGGDA*WYGGGGD 402
Query: 219 GDEGG------CGGGDGVGGG 233
G+ GG GGGD VGGG
Sbjct: 401 GEGGGGLT*W*GGGGDDVGGG 339
Score = 41.2 bits (95), Expect(2) = 3e-05
Identities = 33/76 (43%), Positives = 35/76 (45%), Gaps = 6/76 (7%)
Frame = -1
Query: 164 GDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSG--GGGGGDDGSGSGGDE 221
G GD +GG GD G G D GGGD+ G G GGGGD GG E
Sbjct: 269 GGGDGDGGGGDL***GGG--------GDGDGGGGDL***GGGGECDGGGGDW**YGGGGE 114
Query: 222 GGCGGGD----GVGGG 233
G GGGD G GGG
Sbjct: 113 GDGGGGDL**YGGGGG 66
Score = 33.1 bits (74), Expect = 0.043
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 16/66 (24%)
Frame = -1
Query: 164 GDGDNEGGD------GDACENGEGWWEAAVEVADDACGGGDMEIDGNSGG---------- 207
GDGD GGD G C+ G G W + GGGD+ G GG
Sbjct: 215 GDGDGGGGDL***GGGGECDGGGGDW**YGGGGEGDGGGGDL**YGGGGGDL**YGFGTG 36
Query: 208 GGGGDD 213
GGGG D
Sbjct: 35 GGGGGD 18
Score = 32.7 bits (73), Expect = 0.056
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 27/66 (40%)
Frame = -1
Query: 195 GGGDM--EIDGNSGGGGGGD------------------------DGSGSGGDE-GGCGGG 227
GGGD+ + G GGGGD DG G GGD GGG
Sbjct: 584 GGGDL*IYVGAGEGEGGGGDV*WYGGGGNFTGGGGDL*MYVGAGDGEGGGGDA*WYGGGG 405
Query: 228 DGVGGG 233
DG GGG
Sbjct: 404 DGEGGG 387
Score = 27.7 bits (60), Expect = 1.8
Identities = 20/44 (45%), Positives = 22/44 (49%), Gaps = 5/44 (11%)
Frame = -1
Query: 195 GGGDMEIDGNSGG---GGGGDDGSGSGGDEGGCGGGD--GVGGG 233
GGG+ + GG GGGGD G EG GGGD GGG
Sbjct: 635 GGGEA*M*TGGGGDFVGGGGDL*IYVGAGEGEGGGGDV*WYGGG 504
Score = 26.2 bits (56), Expect = 5.2
Identities = 16/36 (44%), Positives = 18/36 (49%), Gaps = 8/36 (22%)
Frame = -1
Query: 206 GGGGGGDDGSGSGGDEGGCGG--------GDGVGGG 233
GGGG +G GGD G GG G+G GGG
Sbjct: 638 GGGGEA*M*TGGGGDFVGGGGDL*IYVGAGEGEGGG 531
Score = 21.6 bits (44), Expect(2) = 3e-05
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -3
Query: 139 WWWRG 143
WWWRG
Sbjct: 348 WWWRG 334
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 45.8 bits (107), Expect = 6e-06
Identities = 33/80 (41%), Positives = 40/80 (49%), Gaps = 2/80 (2%)
Frame = -2
Query: 155 DCGCSGSDR-GDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDD 213
D G G D GD D +G DG+A GEG +A GGG+ G+ GGGG GD
Sbjct: 569 D*GGEGLDGVGDFDGDGADGEAVGGGEG----------EAGGGGE---SGDGGGGGEGDF 429
Query: 214 GSGSGG-DEGGCGGGDGVGG 232
G GG +E G + VGG
Sbjct: 428 GRVWGGEEEAEVAGAEEVGG 369
Score = 33.9 bits (76), Expect = 0.025
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -2
Query: 197 GDMEIDGNSGGGGGGDDGSGSGGDEGGCGG----GDGVGGG 233
G +DG G G DG GG EG GG GDG GGG
Sbjct: 563 GGEGLDGVGDFDGDGADGEAVGGGEGEAGGGGESGDGGGGG 441
Score = 33.9 bits (76), Expect = 0.025
Identities = 18/43 (41%), Positives = 21/43 (47%), Gaps = 3/43 (6%)
Frame = -2
Query: 195 GGGDMEIDGNSG---GGGGGDDGSGSGGDEGGCGGGDGVGGGW 234
G GD + DG G GGG G+ G G +GG GG G W
Sbjct: 545 GVGDFDGDGADGEAVGGGEGEAGGGGESGDGGGGGEGDFGRVW 417
>TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding protein 2,
partial (93%)
Length = 725
Score = 44.3 bits (103), Expect = 2e-05
Identities = 32/81 (39%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 157 GCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSG 216
G G RG G GG G E G G + GGG G GGG GG G
Sbjct: 328 GGGGGGRGGG-GYGGGGGRREGGYGGGGGS-----RGYGGGGGGYGGGGGGGYGGRREGG 489
Query: 217 SGGDEGGC---GGGDGVGGGW 234
GGD GG GG G GG W
Sbjct: 490 YGGDGGGSRYGSGGGGGGGNW 552
Score = 36.2 bits (82), Expect = 0.005
Identities = 23/46 (50%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 193 ACGGGDMEIDGNSGGGGGGDDGSGSGGDEGGCGGG-----DGVGGG 233
A GGG G GG GGG G G G EGG GGG G GGG
Sbjct: 316 ARGGG-----GGGGGRGGGGYGGGGGRREGGYGGGGGSRGYGGGGG 438
Score = 34.7 bits (78), Expect = 0.015
Identities = 20/42 (47%), Positives = 21/42 (49%), Gaps = 3/42 (7%)
Frame = +1
Query: 195 GGGDMEIDGNSGGGGGG---DDGSGSGGDEGGCGGGDGVGGG 233
GGG G G GGGG + G G GG G GGG G GG
Sbjct: 325 GGGGGGGRGGGGYGGGGGRREGGYGGGGGSRGYGGGGGGYGG 450
Score = 33.9 bits (76), Expect = 0.025
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +1
Query: 200 EIDGNSGGGGGGDDGSGSGGDEGGCG---GGDGVGGG 233
E GGGGGG G G GG GG G GG G GGG
Sbjct: 307 EAQARGGGGGGG--GRGGGGYGGGGGRREGGYGGGGG 411
Score = 27.3 bits (59), Expect = 2.3
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 184 EAAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGDGVGGG 233
E A+ A + G E+DG + G GG G GGG G GGG
Sbjct: 235 EEAMRSAIEGMNGN--ELDGRNITVNEAQARGGGGGGGGRGGGGYGGGGG 378
>AW164126
Length = 387
Score = 43.9 bits (102), Expect = 2e-05
Identities = 34/85 (40%), Positives = 37/85 (43%), Gaps = 15/85 (17%)
Frame = -1
Query: 164 GDGDNEGGDGD-----ACENGEGWWEAAVEVADDACGGGDM-----EIDGNSGGG----- 208
G GD GG G+ C GEG GGGD+ G+ GGG
Sbjct: 360 GGGDFTGGGGEL***GGCGMGEG-------------GGGDL***GGWGTGDGGGGDL*** 220
Query: 209 GGGDDGSGSGGDEGGCGGGDGVGGG 233
GGG DG G GGD G GDG GGG
Sbjct: 219 GGGGDGEGGGGDL**YGFGDGEGGG 145
Score = 33.1 bits (74), Expect = 0.043
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = -1
Query: 207 GGGGGDDGSGSGGDE---GGCGGGDGVGG 232
G GGG D +G GG+ GGCG G+G GG
Sbjct: 369 GVGGGGDFTGGGGEL***GGCGMGEGGGG 283
Score = 31.2 bits (69), Expect = 0.16
Identities = 27/66 (40%), Positives = 28/66 (41%), Gaps = 9/66 (13%)
Frame = -1
Query: 164 GDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEI--DGNSGGGGGGD-------DG 214
G G EGG GD G GW GGGD+ G G GGGGD DG
Sbjct: 312 GCGMGEGGGGDL***G-GW-------GTGDGGGGDL***GGGGDGEGGGGDL**YGFGDG 157
Query: 215 SGSGGD 220
G GGD
Sbjct: 156 EGGGGD 139
>TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein {Danio
rerio;} , partial (5%)
Length = 678
Score = 43.9 bits (102), Expect = 2e-05
Identities = 39/110 (35%), Positives = 43/110 (38%), Gaps = 27/110 (24%)
Frame = -2
Query: 151 LESGDCGCSGSDRGDG----DNEGGDGDACENG--EGWWEAAVEVADDACGG-GDMEIDG 203
L GD GC G G GGDG + EG A+ VAD + GG G M +
Sbjct: 521 LGGGDGGCGGEGSGVWVIVVRELGGDGVVSDVRCVEGGGSGALSVADMSKGGEGGMVVTP 342
Query: 204 NSGGGGGGDDGSG--------------------SGGDEGGCGGGDGVGGG 233
GGGGGG G G GG GG GG G GGG
Sbjct: 341 YFGGGGGGCGGDGREQGKEASPDIIALPAITEAGGGVVGGRDGGGGCGGG 192
Score = 33.9 bits (76), Expect = 0.025
Identities = 23/65 (35%), Positives = 26/65 (39%), Gaps = 3/65 (4%)
Frame = -2
Query: 157 GCSGSDRGDGDNEGGDGDACENGEGW---WEAAVEVADDACGGGDMEIDGNSGGGGGGDD 213
G G G GD G G A + G + + D GGG M GGG GG
Sbjct: 674 GGVGGGGGGGDRVGVGGGASSDVSGVDSRGSGVLSIEDIGRGGGGMVATPYLGGGDGGCG 495
Query: 214 GSGSG 218
G GSG
Sbjct: 494 GEGSG 480
Score = 33.5 bits (75), Expect = 0.033
Identities = 31/90 (34%), Positives = 37/90 (40%), Gaps = 6/90 (6%)
Frame = -2
Query: 150 VLESGDCGCSGSDRGDGDNEGGDGD-ACENGEGWWEAAVEVADDACGGGDMEIDGNSGGG 208
+ E+G G D G G GG+G+ E E +A A G + GGG
Sbjct: 254 ITEAGGGVVGGRDGGGGCGGGGEGEQGRETSPTDLETFEIIALPAIKGAE------GGGG 93
Query: 209 GGGDDGSGSGGDEGGCGGG-----DGVGGG 233
GGG S GG EGG G GV GG
Sbjct: 92 GGGRALSDFGGVEGGGSGALSAEDIGVEGG 3
Score = 28.9 bits (63), Expect = 0.80
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 203 GNSGGGGGGDDGSGSGGDEGGCGGGDGVGGG 233
G GGGGGGD GG G D G G
Sbjct: 671 GVGGGGGGGDRVGVGGGASSDVSGVDSRGSG 579
Score = 26.9 bits (58), Expect = 3.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 210 GGDDGSGSGGDEGGCGGG 227
GG G G GGD G GGG
Sbjct: 674 GGVGGGGGGGDRVGVGGG 621
>TC19458 weakly similar to UP|Q9STE8 (Q9STE8) Chloroplast import-associated
channel homolog (AT3g46740/T6H20_230), partial (10%)
Length = 469
Score = 43.5 bits (101), Expect = 3e-05
Identities = 19/29 (65%), Positives = 19/29 (65%)
Frame = +3
Query: 206 GGGGGGDDGSGSGGDEGGCGGGDGVGGGW 234
GGGGGG G G GG G GGGDG GG W
Sbjct: 219 GGGGGGTTGGGGGGGWFGGGGGDGNGGFW 305
Score = 27.7 bits (60), Expect = 1.8
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 185 AAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGDGVGG 232
AA E + G ++ G GG+ G D+GG GGG+ GG
Sbjct: 278 AAAEPTSTSSSAGGASTSASARGEEGGERGGVE--DDGGGGGGECDGG 141
>AV427333
Length = 387
Score = 42.7 bits (99), Expect = 5e-05
Identities = 32/81 (39%), Positives = 36/81 (43%), Gaps = 11/81 (13%)
Frame = -3
Query: 164 GDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSGGDEGG 223
G+G + GG G C G G + CGGG + GGGGDDG G G GG
Sbjct: 364 GEGGSGGGGGRTC--GGGVIG*CGDGGGRTCGGGGVN---G*DDGGGGDDGGGEGCPRGG 200
Query: 224 ------CGGGD-----GVGGG 233
GGGD GVGGG
Sbjct: 199 GANE*EGGGGDLK*WEGVGGG 137
Score = 31.6 bits (70), Expect = 0.12
Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = -3
Query: 200 EIDGNSGGGGGGDDGSGS---GGDEGG--CGGGDGVGG 232
E +G SGGGGG G G GD GG CGGG GV G
Sbjct: 367 EGEGGSGGGGGRTCGGGVIG*CGDGGGRTCGGG-GVNG 257
Score = 29.3 bits (64), Expect = 0.61
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 154 GDCGCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGD- 212
G G +G D G G ++GG G+ C G GG E +G GGG
Sbjct: 277 GGGGVNG*DDGGGGDDGG-GEGCPRG----------------GGANE*EG---GGGDLK* 158
Query: 213 -DGSGSG--GDEGGCGGGDGVGGG 233
+G G G G EGG GG G GG
Sbjct: 157 WEGVGGGLKGWEGGVGGL*GWEGG 86
>TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-binding,
abscisic acid-inducible protein, complete
Length = 972
Score = 42.4 bits (98), Expect = 7e-05
Identities = 29/74 (39%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +2
Query: 163 RGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSGGDEG 222
RG G GG G EG + GGG G GGG GG G G GG
Sbjct: 593 RGRGGGGGGGGYGGGRREGGYG----------GGGGSRYSGGGGGGYGGSGGGGYGGRRE 742
Query: 223 GCGGGDG---VGGG 233
G GGG G GGG
Sbjct: 743 GGGGGYGGSREGGG 784
Score = 36.2 bits (82), Expect = 0.005
Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 200 EIDGNSGGGGGGDDGSGSGGDEGGCGGGDG---VGGG 233
E GGGGG G G G EGG GGG G GGG
Sbjct: 581 EAQARGRGGGGGGGGYGGGRREGGYGGGGGSRYSGGG 691
Score = 32.3 bits (72), Expect = 0.073
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 86 LLTVTVVVVAATTLVVEVAIVVVTLVEVIVQVVVPTSMEAVVTVEVVVVIMKV 138
++ VVVV T+VV VA++ V VE +V V AVV VVVV++ V
Sbjct: 618 VVDTAVVVVKVDTVVVVVAVIAVVAVEAMV--VAEEEDTAVVVKVVVVVMVAV 770
Score = 28.5 bits (62), Expect = 1.0
Identities = 19/49 (38%), Positives = 27/49 (54%), Gaps = 4/49 (8%)
Frame = +3
Query: 92 VVVAATTLVVEVAIVVVTLVEVIV----QVVVPTSMEAVVTVEVVVVIM 136
VVV +VV+V VVV + + V +VV + V V+VVVV+M
Sbjct: 615 VVVDTAVVVVKVDTVVVVVAVIAVVAVEAMVVAEEEDTAVVVKVVVVVM 761
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 42.4 bits (98), Expect = 7e-05
Identities = 28/75 (37%), Positives = 36/75 (47%), Gaps = 9/75 (12%)
Frame = -2
Query: 168 NEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGG-----GDDGS-GSGGDE 221
+E GD + G+ E + DD GD+ D + G GG GD G+ G G +E
Sbjct: 458 SESGDEGEEQGGDDGSEKLSDDVDDTAEEGDVTADEEAEGDGGVDVAAGDVGADGDGDEE 279
Query: 222 GGC---GGGDGVGGG 233
G C GGGD GGG
Sbjct: 278 GECVGDGGGDEAGGG 234
Score = 39.7 bits (91), Expect = 5e-04
Identities = 33/90 (36%), Positives = 40/90 (43%), Gaps = 8/90 (8%)
Frame = -2
Query: 152 ESGDCGCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGG- 210
E GD GDG + GD +G+G E E D GGGD +GGGGG
Sbjct: 377 EEGDVTADEEAEGDGGVDVAAGDVGADGDGDEEG--ECVGD--GGGD-----EAGGGGGA 225
Query: 211 -------GDDGSGSGGDEGGCGGGDGVGGG 233
GD G+G+G DE GGD + G
Sbjct: 224 VVGEFVVGDSGTGAGEDED--EGGDELSQG 141
>TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (81%)
Length = 1355
Score = 42.4 bits (98), Expect = 7e-05
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = -3
Query: 166 GDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEI-----DGNSG-GGGGGDDGSGSGG 219
GD+EGG G E + A ++V D GG +E+ DG G G GGG GSGG
Sbjct: 504 GDDEGGGGAGAEAED---HAGLDVVDGLVGGESLEVVLGEGDGTDGFGSGGGA*FKGSGG 334
Query: 220 DEGGCGGGDGVGGG 233
GGG V GG
Sbjct: 333 A*DKVGGGIVVCGG 292
Score = 26.9 bits (58), Expect = 3.1
Identities = 23/64 (35%), Positives = 30/64 (45%)
Frame = -3
Query: 164 GDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSGGDEGG 223
G D E G E+GE E + + A GGGD + + G GG+ + G DEGG
Sbjct: 654 GAVDGEIEAGIVVEDGERDAEGS-RLLLRALGGGDAD---DVGELAGGEKLAELGDDEGG 487
Query: 224 CGGG 227
G G
Sbjct: 486 GGAG 475
>BP043633
Length = 542
Score = 41.6 bits (96), Expect = 1e-04
Identities = 20/42 (47%), Positives = 21/42 (49%), Gaps = 10/42 (23%)
Frame = -1
Query: 203 GNSGGGGGG----------DDGSGSGGDEGGCGGGDGVGGGW 234
G GGGGGG D G G GG CGGG+GV GW
Sbjct: 488 GRGGGGGGGNCLGW*E*GFDGGGGGGGGGPHCGGGEGVWDGW 363
Score = 36.6 bits (83), Expect = 0.004
Identities = 31/80 (38%), Positives = 32/80 (39%), Gaps = 13/80 (16%)
Frame = -1
Query: 160 GSDRGDGDNEGGDGDACENGEGWWEA-------AVEVADDACGGGDMEIDGN------SG 206
G D G G GG G C GEG W+ A CGGG I G SG
Sbjct: 437 GFDGGGGG--GGGGPHCGGGEGVWDGWWY*NWGEYHGA*GGCGGG---IWGKWWWWLGSG 273
Query: 207 GGGGGDDGSGSGGDEGGCGG 226
GGGGG GGCGG
Sbjct: 272 GGGGGG---------GGCGG 240
Score = 32.3 bits (72), Expect = 0.073
Identities = 21/45 (46%), Positives = 23/45 (50%), Gaps = 4/45 (8%)
Frame = -1
Query: 193 ACG----GGDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGDGVGGG 233
ACG GG+ G G GGGG G+ G E G GG G GGG
Sbjct: 539 ACGMWE*GGN*G*GG*GGRGGGGGGGNCLGW*E*GFDGGGGGGGG 405
>AV410227
Length = 428
Score = 41.6 bits (96), Expect = 1e-04
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 166 GDNEGGDGDACENG-EGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSGGDEGGC 224
G GGDG+ G E A E A + GGGD +G G GG G GG+E G
Sbjct: 428 GGKRGGDGEFAHGGAERGSTAGGEPAYEGGGGGD*AEEGGGVDGAGGVM-EGGGGEEAGD 252
Query: 225 GGGDGVGGG 233
GG +G G G
Sbjct: 251 GGEEGGGVG 225
Score = 28.9 bits (63), Expect = 0.80
Identities = 27/73 (36%), Positives = 31/73 (41%), Gaps = 1/73 (1%)
Frame = -1
Query: 157 GCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSG 216
G G + GDG EGG GE VE D GD+ + GGG G G
Sbjct: 278 GGGGEEAGDGGEEGGGVGVGVVGE------VERGD----VGDVAEEEAVDGGGRG----G 141
Query: 217 SGGDEGG-CGGGD 228
DEGG CG G+
Sbjct: 140 EALDEGG*CGPGN 102
>TC7947 similar to UP|Q9ST69 (Q9ST69) Ribosomal protein S5, partial (81%)
Length = 1294
Score = 41.2 bits (95), Expect = 2e-04
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -2
Query: 179 GEGWWEAAVEVADDACGG--------GDMEIDGNSGGGGGGDDGSGSGGDEGGCGG---- 226
G+ WW EV CG G G+ GGGGGG++GSG +EG GG
Sbjct: 348 GDFWWVEG-EVFFWVCGVEEGGVNVVGGFAFGGDGGGGGGGEEGSGEEREEGEFGG*GEE 172
Query: 227 GDGVGG 232
G+G GG
Sbjct: 171 GEG*GG 154
>TC14729 homologue to UP|Q8W590 (Q8W590) At2g32080/F22D22.17, partial (51%)
Length = 749
Score = 40.8 bits (94), Expect = 2e-04
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +3
Query: 197 GDMEIDGNSGGGGGGDDGSGSGGDEGGCGGGD 228
G E++GNSGGGGGG GSGG GG GG D
Sbjct: 228 GAAEMEGNSGGGGGG----GSGGGGGGGGGSD 311
Score = 26.9 bits (58), Expect = 3.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 186 AVEVADDACGGGDMEIDGNSGGGGGGD 212
A E+ ++ GGG G GGGGG D
Sbjct: 231 AAEMEGNSGGGGGGGSGGGGGGGGGSD 311
Score = 26.2 bits (56), Expect = 5.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 195 GGGDMEIDGNSGGGGGGDD 213
GGG G GGGGGG D
Sbjct: 255 GGGGGGGSGGGGGGGGGSD 311
>TC19911 weakly similar to PIR|A44805|A44805 eggshell protein precursor -
fluke (Schistosoma haematobium) {Schistosoma
haematobium;} , partial (24%)
Length = 350
Score = 40.8 bits (94), Expect = 2e-04
Identities = 30/82 (36%), Positives = 34/82 (40%), Gaps = 5/82 (6%)
Frame = +1
Query: 157 GCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGG---GGGGDD 213
G G+D DNE G + G G GG + D SGG GG GD
Sbjct: 49 GSHGNDHRHSDNEHGGRRSETTGHG------------LSGGGYDDDNRSGGRTGGGYGDG 192
Query: 214 GSGSG--GDEGGCGGGDGVGGG 233
G +G GD GG GG G G G
Sbjct: 193 GHSAGGYGDHGGRSGGGGGGYG 258
Score = 38.1 bits (87), Expect = 0.001
Identities = 28/77 (36%), Positives = 31/77 (39%)
Frame = +1
Query: 157 GCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSG 216
G SG D + GG G G+ + A G GD GGGG GD G
Sbjct: 121 GLSGGGYDDDNRSGG-----RTGGGYGDGG----HSAGGYGDHGGRSGGGGGGYGDGGLS 273
Query: 217 SGGDEGGCGGGDGVGGG 233
SG G GG GVG G
Sbjct: 274 SGSGGYGDGGRSGVGYG 324
Score = 26.6 bits (57), Expect = 4.0
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 203 GNSGGGGGGDDGSGSGGDEGGCGG---GDGVGGG 233
G+SGGG G+D S + GG G G+ GG
Sbjct: 34 GHSGGGSHGNDHRHSDNEHGGRRSETTGHGLSGG 135
>TC7861 similar to UP|AAR86686 (AAR86686) Proline dehydrogenase , partial
(40%)
Length = 943
Score = 40.8 bits (94), Expect = 2e-04
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 13/51 (25%)
Frame = -2
Query: 196 GGDMEIDGNS---GGGGGGDD----------GSGSGGDEGGCGGGDGVGGG 233
GG M+ G S GGG GG++ G G GG+EGGCGGG G G
Sbjct: 438 GGGMKHGGGSEELGGGYGGEEFLNVVEIELSGVGGGGEEGGCGGGRWFGSG 286
>TC19908 similar to GB|CAA60022.1|791150|VURNEXT26 extensin-like protein
{Vigna unguiculata;} , partial (49%)
Length = 472
Score = 40.8 bits (94), Expect = 2e-04
Identities = 27/64 (42%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 167 DNEGGDGDACENGEGWWEAAVEVADDACGGGDMEI--DGNSGGGGGGDDGSGSGGDEGGC 224
D +GG GD G G + GGGD+ I G G GGGGD + GG EG
Sbjct: 195 DEDGGGGDLYT*GGG--------GECEGGGGDL*I*GGGGDGEGGGGDLYTYGGGGEGDG 40
Query: 225 GGGD 228
GGGD
Sbjct: 39 GGGD 28
Score = 39.7 bits (91), Expect = 5e-04
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 13/55 (23%)
Frame = -2
Query: 191 DDACGGGDMEIDGNSG-----GG-----GGGDDGSGSGGD---EGGCGGGDGVGG 232
D+ GGGD+ G G GG GGG DG G GGD GG G GDG GG
Sbjct: 195 DEDGGGGDLYT*GGGGECEGGGGDL*I*GGGGDGEGGGGDLYTYGGGGEGDGGGG 31
Score = 32.0 bits (71), Expect = 0.095
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 14/53 (26%)
Frame = -2
Query: 195 GGGDM------EIDGNSGGG-----GGGDDGSGSGGDE---GGCGGGDGVGGG 233
GGG++ D + GGG GGG + G GGD G GGGDG GGG
Sbjct: 234 GGGEL*RYE**GCDEDGGGGDLYT*GGGGECEGGGGDL*I*G--GGGDGEGGG 82
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 40.4 bits (93), Expect = 3e-04
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = -1
Query: 153 SGDCGCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGG---G 209
+G+ +G G G GG G A +G EA V A GG D +GGG G
Sbjct: 516 AGEVAGTGVSAGGGVAAGGGGVAGGGEKGGGEAGGGVLAGAGGGVD*-----TGGGEDTG 352
Query: 210 GGDDGSGSGGDEGG----CGGGDGVGGG 233
GG+D +G G D GG GGG+ GG
Sbjct: 351 GGED*AGGGVDAGGGED*TGGGED*AGG 268
Score = 35.0 bits (79), Expect = 0.011
Identities = 30/83 (36%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = -1
Query: 154 GDCGCSGSDRGDGDNEGGDGDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDD 213
G+ +G++ G G G GD G A EVA G G G GGG+
Sbjct: 597 GESETTGANAGAG---AGAGDLLFTLAG--AGAGEVAGTGVSAGGGVAAGGGGVAGGGEK 433
Query: 214 GSG--SGGDEGGCGGG-DGVGGG 233
G G GG G GGG D GGG
Sbjct: 432 GGGEAGGGVLAGAGGGVD*TGGG 364
Score = 34.7 bits (78), Expect = 0.015
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -1
Query: 160 GSDRGDGDNEGGD-GDACENGEGWWEAAVEVADDACGGGDMEIDGNSGGGGGGDDGSGSG 218
G+ G+ + G + G G+ + A A + G G G + GGGG G G
Sbjct: 609 GASDGESETTGANAGAGAGAGDLLFTLAGAGAGEVAGTGVSAGGGVAAGGGGVAGGGEKG 430
Query: 219 GDEGGCGGGDGVGGG 233
G E G G G GGG
Sbjct: 429 GGEAGGGVLAGAGGG 385
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.315 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,156,861
Number of Sequences: 28460
Number of extensions: 75526
Number of successful extensions: 3684
Number of sequences better than 10.0: 577
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2693
length of query: 234
length of database: 4,897,600
effective HSP length: 87
effective length of query: 147
effective length of database: 2,421,580
effective search space: 355972260
effective search space used: 355972260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0302b.3