BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0288.5
(186 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC11304 similar to PIR|T04669|T04669 serine O-acetyltransferase ... 53 4e-08
BP043633 52 6e-08
TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycop... 39 1e-06
TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding p... 42 1e-06
TC14645 similar to UP|Q41122 (Q41122) Proline-rich protein precu... 46 4e-06
TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Ce... 44 1e-05
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 44 2e-05
AW720113 43 3e-05
BP049447 43 4e-05
AV409412 31 6e-05
TC9962 similar to UP|Q8L7Z6 (Q8L7Z6) AT3g54680/T5N23_40, partial... 42 6e-05
TC19121 similar to UP|ENAH_MOUSE (Q03173) Enabled protein homolo... 42 6e-05
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part... 42 6e-05
TC14921 similar to UP|Q8L949 (Q8L949) Plastid protein, partial (... 31 2e-04
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 40 2e-04
AV427333 40 2e-04
TC8581 similar to UP|Q94II4 (Q94II4) NAM-like protein, partial (9%) 40 2e-04
TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-bindi... 40 2e-04
AV410275 39 7e-04
TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein... 37 0.002
>TC11304 similar to PIR|T04669|T04669 serine O-acetyltransferase F8D20.150
- Arabidopsis thaliana {Arabidopsis
thaliana;} , partial (24%)
Length = 775
Score = 52.8 bits (125), Expect = 4e-08
Identities = 23/49 (46%), Positives = 26/49 (52%)
Frame = -3
Query: 18 WWWGWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGG 66
WWW W WW GG + G+R+VVV GWWWWW GGGG
Sbjct: 359 WWW-W-WWLTQAMRGGVEIGERIVVV------------GWWWWWWGGGG 255
Score = 43.5 bits (101), Expect = 2e-05
Identities = 29/76 (38%), Positives = 32/76 (41%), Gaps = 4/76 (5%)
Frame = -1
Query: 63 GGGGGGG----GCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDR 118
GGGGGGG C A+ GG GGGG V + WW GGGG G
Sbjct: 430 GGGGGGGRRRRACWGERASYGGGSGGGGGGSHKPCEVGLK*GRELWWWGGGGGGG----- 266
Query: 119 VVAAMVVVVLAMIGWW 134
VVV+A WW
Sbjct: 265 ------VVVVAK--WW 242
Score = 42.0 bits (97), Expect = 6e-05
Identities = 28/78 (35%), Positives = 33/78 (41%)
Frame = -1
Query: 69 GGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVL 128
GG GRV GGG GGG R W + GG G G GG + +
Sbjct: 463 GGGGRVQERRFGGGGGGGRRRRAC-------WGERASYGGGSGGGGGGSHKPCEVGLK*G 305
Query: 129 AMIGWW*DGGGGGCSMVA 146
+ WW GGGGG +VA
Sbjct: 304 RELWWWGGGGGGGVVVVA 251
Score = 41.2 bits (95), Expect = 1e-04
Identities = 21/56 (37%), Positives = 26/56 (45%)
Frame = -3
Query: 57 WWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGS 112
WWWWW + + GG G +R++VV WWW WW GGGGS
Sbjct: 356 WWWWW------------LTQAMRGGVEIG---ERIVVVG--WWW----WWWGGGGS 252
Score = 36.6 bits (83), Expect = 0.003
Identities = 28/72 (38%), Positives = 32/72 (43%)
Frame = -2
Query: 29 VGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGS 88
VGG G G+ V VA +VVVVVA W * + G N GGG
Sbjct: 414 VGGAGEHVGESERVTVAVVVVVVVAHTSHARWG*----------------NRGENCGGG- 286
Query: 89 DRVMVVVAIWWW 100
V+VVV WWW
Sbjct: 285 --VVVVVVGWWW 256
Score = 35.4 bits (80), Expect = 0.006
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -2
Query: 75 AATVDGGGNGGGGSDRV----MVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAM 130
AA V G G G S+RV +VVV + +W * G + GG VVV+ +
Sbjct: 423 AAVVGGAGEHVGESERVTVAVVVVVVVAHTSHARWG*NRGENCGGG--------VVVVVV 268
Query: 131 IGWW*DGGGGGC 142
WW* GG C
Sbjct: 267 GWWW*QSGGSFC 232
Score = 32.0 bits (71), Expect = 0.067
Identities = 15/47 (31%), Positives = 16/47 (33%)
Frame = -1
Query: 59 WWW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQW 105
WWW GGGGGG VVV WW + W
Sbjct: 295 WWWGGGGGGG------------------------VVVVAKWWFFLHW 227
Score = 31.6 bits (70), Expect = 0.087
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 14 VVIGWWWGWQWW*VGVGGGGGDSGDRLVVVVATMVV 49
VV+GWWW W WW GGG G ++VV+ A V
Sbjct: 296 VVVGWWW-W-WW----GGG----GSKVVVLFALATV 219
Score = 28.9 bits (63), Expect = 0.56
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -3
Query: 98 WWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMV 145
WWW W GG G+R+V ++GWW GGG S V
Sbjct: 356 WWWWWLTQAMRGGVEI--GERIV---------VVGWWWWWWGGGGSKV 246
Score = 25.0 bits (53), Expect = 8.2
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 18 WWWGWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWW 60
WWWG G GGGG VVVVA WW++
Sbjct: 295 WWWG------GGGGGG-------VVVVAK----------WWFF 236
>BP043633
Length = 542
Score = 52.0 bits (123), Expect = 6e-08
Identities = 37/105 (35%), Positives = 42/105 (39%), Gaps = 5/105 (4%)
Frame = -1
Query: 63 GGGGGGGGC-GRVAATVDGGGNGGGGSDRVMVVVAIW--WWL--WCQWW*GGGGSGSGGD 117
GGGGGGG C G DGGG GGGG +W WW W ++ GG G G
Sbjct: 482 GGGGGGGNCLGW*E*GFDGGGGGGGGGPHCGGGEGVWDGWWY*NWGEYHGA*GGCGGG-- 309
Query: 118 RVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRV 162
+ WW GGGG G GGG G R+
Sbjct: 308 ---------IWGKWWWWLGSGGGG-----------GGGGGCGGRM 234
Score = 42.0 bits (97), Expect = 6e-05
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = -1
Query: 17 GWWW-GWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*G---GGGGGGGCG 72
GWW+ W + GG GG + G WWWW G GGGGGGGCG
Sbjct: 368 GWWY*NWGEYHGA*GGCGG------------------GIWGKWWWWLGSGGGGGGGGGCG 243
Score = 30.4 bits (67), Expect = 0.19
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Frame = -2
Query: 110 GGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAAT--VEGE------GNGGGGGDR 161
GG G AA+VV A+ G G GGG + +T +EG+ GNGGGG D+
Sbjct: 451 GGKNKGSTEEEAAVVVAPTAVEGKE-SGMGGGTEIGGSTTGLEGDVAVVFGGNGGGGWDQ 275
Query: 162 VVVVVLVVAV 171
V V
Sbjct: 274 AAEAEAEVVV 245
Score = 29.3 bits (64), Expect = 0.43
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 17 GWWWGWQWW*V--GVGGGGGDSGDRL 40
G W W WW G GGGGG G R+
Sbjct: 311 GIWGKWWWWLGSGGGGGGGGGCGGRM 234
>TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (57%)
Length = 941
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Frame = -1
Query: 60 WW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRV 119
W+ GGG GG G + V G GGG D W GGGG G GG +
Sbjct: 518 WYGGGGNFTGGGGDL*MYVGAGDGEGGGGD--------------A*WYGGGGDGEGGGGL 381
Query: 120 VAAMVVVVLAMIGWW*DGG----GGGCSMVAATVEGEGNGGGG 158
W* GG GGG + G G+GGGG
Sbjct: 380 T------------*W*GGGGDDVGGGGDL***GG*GMGDGGGG 288
Score = 37.4 bits (85), Expect = 0.002
Identities = 38/108 (35%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Frame = -1
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGG--SGSGGDRVV 120
GGG GG G + V G GGG D W GGGG +G GGD
Sbjct: 605 GGGDFVGGGGDL*IYVGAGEGEGGGGD--------------V*WYGGGGNFTGGGGD--- 477
Query: 121 AAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNG------GGGGDRV 162
+ + V A G +GGGG +GEG G GGGGD V
Sbjct: 476 --L*MYVGAGDG---EGGGGDA*WYGGGGDGEGGGGLT*W*GGGGDDV 348
Score = 35.0 bits (79), Expect = 0.008
Identities = 31/100 (31%), Positives = 34/100 (34%), Gaps = 11/100 (11%)
Frame = -3
Query: 18 WWWGWQWW*VGVGGGGGDSGD--RLVVVVATMVVVVVAMIGWW---WWW*GGGGGGGGCG 72
W W W+W + G G R VVV WW WWW G
Sbjct: 264 WRWRWRWGRFVIVRRGR*RGWWWR*FVVVGR----------WWRM*WWW----------G 145
Query: 73 RVAATVDGGGNGGGGSDRVMVVVAIWW------WLWCQWW 106
R+ V GG G R VVV WW W W WW
Sbjct: 144 RLV--VVWGGRRGRWWWR*FVVVWRWWGRFIIVWFWYGWW 31
Score = 34.3 bits (77), Expect = 0.013
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Frame = -3
Query: 57 WWW------WW*GGGGGGGGC--GRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW 106
WWW WW G C GR + G G GG R V +WWW WW
Sbjct: 636 WWWGSINVNWW-----GRRFCWWGR*FVNICGSG*RGG---RRW*CVVVWWWWQFYWW 487
Score = 31.2 bits (69), Expect(2) = 2e-04
Identities = 41/132 (31%), Positives = 47/132 (35%)
Frame = -1
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
VG G G G GD W+ GG G GGG G GG + GG
Sbjct: 464 VGAGDGEGGGGDA*------------------WYGGGGDGEGGG-GLT*W*GGGGDDVGG 342
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVA 146
G D *GG G G GG +L G DG GGG +
Sbjct: 341 GGD--------------L***GG*GMGDGGGG--------LL**YGGGGDGDGGGGDL** 228
Query: 147 ATVEGEGNGGGG 158
G+G+GGGG
Sbjct: 227 *GGGGDGDGGGG 192
Score = 30.8 bits (68), Expect = 0.15
Identities = 36/103 (34%), Positives = 40/103 (37%), Gaps = 6/103 (5%)
Frame = -1
Query: 62 *GGGGGGGGCGRVAATVDGGGNG-GGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVV 120
*GG G G G G + GGG+G GGG D *GGGG G GG +
Sbjct: 323 *GG*GMGDGGGGLL**YGGGGDGDGGGGD--------------L***GGGGDGDGGGGDL 186
Query: 121 AAMVVVVLAMIGWW*DGGGGGCSMVAAT-----VEGEGNGGGG 158
* GGGG C GEG+GGGG
Sbjct: 185 -------------***GGGGECDGGGGDW**YGGGGEGDGGGG 96
Score = 28.5 bits (62), Expect(2) = 1e-06
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 13/56 (23%)
Frame = -3
Query: 18 WWWG----------WQWW*---VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWW 60
WWWG + WW V + G G G R VV WWWW
Sbjct: 636 WWWGSINVNWWGRRFCWWGR*FVNICGSG*RGGRRW*CVVV-----------WWWW 502
Score = 28.5 bits (62), Expect(2) = 2e-04
Identities = 7/12 (58%), Positives = 9/12 (74%)
Frame = -3
Query: 14 VVIGWWWGWQWW 25
VV+ WWW + WW
Sbjct: 522 VVVWWWWQFYWW 487
Score = 26.6 bits (57), Expect = 2.8
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 10/62 (16%)
Frame = -1
Query: 108 GGGG-----SGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGG-----G 157
GGGG +G GGD V GGGG + EGEG GG G
Sbjct: 638 GGGGEA*M*TGGGGDFV-----------------GGGGDL*IYVGAGEGEGGGGDV*WYG 510
Query: 158 GG 159
GG
Sbjct: 509 GG 504
>TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding protein 2,
partial (93%)
Length = 725
Score = 42.4 bits (98), Expect(2) = 1e-06
Identities = 36/97 (37%), Positives = 37/97 (38%)
Frame = +1
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGGGGGGG G GGG GGGG R GG G GG R
Sbjct: 322 GGGGGGGGRG-------GGGYGGGGGRR-----------------EGGYGGGGGSR---- 417
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
G+ GGGGG G G GGGGG
Sbjct: 418 ---------GY---GGGGG---------GYGGGGGGG 465
Score = 42.4 bits (98), Expect = 5e-05
Identities = 35/98 (35%), Positives = 41/98 (41%)
Frame = +1
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGG GGGG G +GG GGGGS + + GGGG G GG R
Sbjct: 337 GGGRGGGGYGGGGGRREGGYGGGGGSR--------GYGGGGGGYGGGGGGGYGGRREG-- 486
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGD 160
G+ DGGG + G G GGGGG+
Sbjct: 487 ---------GYGGDGGG--------SRYGSGGGGGGGN 549
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 176 WWRRWRVEAM 185
WWRRW++E +
Sbjct: 531 WWRRWKLEEL 560
>TC14645 similar to UP|Q41122 (Q41122) Proline-rich protein precursor,
partial (52%)
Length = 1060
Score = 45.8 bits (107), Expect = 4e-06
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = -2
Query: 57 WWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWC 103
WWWWW GG G G + G G G GG WWW WC
Sbjct: 396 WWWWWPVGGLTGTEVGG*TGGLIGAGAGAGG---------WWWWWWC 283
Score = 43.9 bits (102), Expect = 2e-05
Identities = 33/100 (33%), Positives = 39/100 (39%)
Frame = -2
Query: 17 GWWWGWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAA 76
GWWW W WW VG G +G + ++ GWWWWW G GG G
Sbjct: 402 GWWW-W-WWPVG-----GLTGTEVGG*TGGLIGAGAGAGGWWWWWWCGA*AGG*IGECV- 247
Query: 77 TVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGG 116
GG G G WL * GGG+ +GG
Sbjct: 246 ---GG*TGATG------------WL----**LGGGAATGG 184
>TC15267 similar to UP|EXTN_TOBAC (P13983) Extensin precursor (Cell wall
hydroxyproline-rich glycoprotein), partial (6%)
Length = 1003
Score = 44.3 bits (103), Expect = 1e-05
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 24/63 (38%)
Frame = -2
Query: 49 VVVVAMIGWWWWW*GGGGG------------------------GGGCGRVAATVDGGGNG 84
VVVV + WWWWW GGGG GGG V + G G G
Sbjct: 258 VVVVCAVAWWWWWCGGGGWRG*KPRRE*RRGWRGWRLWRWKLYGGGVDCVVVGLRGCGGG 79
Query: 85 GGG 87
GGG
Sbjct: 78 GGG 70
Score = 37.0 bits (84), Expect = 0.002
Identities = 25/69 (36%), Positives = 29/69 (41%)
Frame = -2
Query: 91 VMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVE 150
V+V WWW WW GGGG R + W GGG C +V +
Sbjct: 255 VVVCAVAWWW----WWCGGGGWRG*KPRRE*RRGWRGWRLWRWKLYGGGVDCVVVG--LR 94
Query: 151 GEGNGGGGG 159
G G GGGGG
Sbjct: 93 GCGGGGGGG 67
Score = 35.0 bits (79), Expect = 0.008
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = -3
Query: 64 GGGGGGGCG-RVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGG GG G R A+ V G +G G +R+++ V W GGGG VV
Sbjct: 341 GGGDGGDAGVREASDVADGADGVG*VERLLLFVR---------WLGGGGG------VVE- 210
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVV 172
+GG G + +GE GGG VVV++ + +V
Sbjct: 209 -------------EGGEGESQGESEEEDGEDGDYGGGSFTVVVLIALLLV 99
Score = 31.2 bits (69), Expect = 0.11
Identities = 26/77 (33%), Positives = 31/77 (39%), Gaps = 15/77 (19%)
Frame = -2
Query: 10 VAMKVVIGWWWGWQWW*VGVGGGG------------GDSGDRL---VVVVATMVVVVVAM 54
V + + WWW WW GGGG G G RL + + VVV +
Sbjct: 258 VVVVCAVAWWW---WW---CGGGGWRG*KPRRE*RRGWRGWRLWRWKLYGGGVDCVVVGL 97
Query: 55 IGWWWWW*GGGGGGGGC 71
G GGGGGGGC
Sbjct: 96 RGC------GGGGGGGC 64
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 43.9 bits (102), Expect = 2e-05
Identities = 33/96 (34%), Positives = 34/96 (35%)
Frame = +3
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAM 123
GGGG GG G GGG GGGG GGGG G GG
Sbjct: 291 GGGGRGGGGYGGGGYGGGGYGGGGR-------------------GGGGYGGGG------- 392
Query: 124 VVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
G+ GG GG G G GGGGG
Sbjct: 393 --------GYGGSGGYGGGGGYGGGGRGGGRGGGGG 476
Score = 39.7 bits (91), Expect = 3e-04
Identities = 33/97 (34%), Positives = 34/97 (35%)
Frame = +3
Query: 65 GGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMV 124
GGG GG GR GGG GGGG GGGG G GG
Sbjct: 279 GGGAGGGGRGGGGYGGGGYGGGGY-------------------GGGGRGGGGY------- 380
Query: 125 VVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDR 161
GGGGG + G G G GGG R
Sbjct: 381 ------------GGGGGYG--GSGGYGGGGGYGGGGR 449
Score = 33.9 bits (76), Expect = 0.018
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = +3
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGG 116
GG GGGGG G GGG GGGG GGG G GG
Sbjct: 372 GGYGGGGGYGGSGGYGGGGGYGGGGR--------------------GGGRGGGG 473
Score = 28.5 bits (62), Expect = 0.74
Identities = 27/86 (31%), Positives = 28/86 (32%)
Frame = +3
Query: 74 VAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGW 133
V T GGG GGGG GGGG G GG G+
Sbjct: 261 VQGTRRGGGAGGGGR-------------------GGGGYGGGG-----------YGGGGY 350
Query: 134 W*DGGGGGCSMVAATVEGEGNGGGGG 159
G GGG G G GGGG
Sbjct: 351 GGGGRGGGGYGGGGGYGGSGGYGGGG 428
Score = 28.1 bits (61), Expect = 0.96
Identities = 23/62 (37%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = +3
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGG--GGCGRVAATVDGGGNGG 85
G GGGGG G G GGGG GG GR GGG GG
Sbjct: 375 GYGGGGGYGGSG-----------------------GYGGGGGYGGGGR------GGGRGG 467
Query: 86 GG 87
GG
Sbjct: 468 GG 473
Score = 22.7 bits (47), Expect(2) = 5.3
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = +2
Query: 18 WWWGWQWW 25
WWW W W
Sbjct: 416 WWWRWIRW 439
Score = 21.2 bits (43), Expect(2) = 5.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 63 GGGGGGGGCG 72
GGG GGGG G
Sbjct: 450 GGGRGGGGGG 479
>AW720113
Length = 512
Score = 43.1 bits (100), Expect = 3e-05
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -1
Query: 60 WW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWW 99
W GGGGGGGGCG GGG G G VVV + W
Sbjct: 185 WNCGGGGGGGGCGCGCGGGSGGGGGSSGEGWNAVVVGVSW 66
Score = 35.4 bits (80), Expect = 0.006
Identities = 19/39 (48%), Positives = 24/39 (60%), Gaps = 1/39 (2%)
Frame = -1
Query: 59 WWW*GGGGGGG-GCGRVAATVDGGGNGGGGSDRVMVVVA 96
W GGGGGGG GCG + GGG+ G G + V+V V+
Sbjct: 185 WNCGGGGGGGGCGCGCGGGSGGGGGSSGEGWNAVVVGVS 69
Score = 28.1 bits (61), Expect = 0.96
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 137 GGGGGCSMVAATVEGEGNGGGGG 159
GGGGGC G G+GGGGG
Sbjct: 167 GGGGGCGCGC----GGGSGGGGG 111
Score = 26.2 bits (56), Expect = 3.7
Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
Frame = -3
Query: 98 WW-WLWCQWW* 107
WW WLW WW*
Sbjct: 159 WWLWLWLWWW* 127
Score = 25.4 bits (54), Expect = 6.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 137 GGGGGCSMVAATVEGEGNGGGGGDRVVVVV 166
GGG GC + G G+ G G + VVV V
Sbjct: 161 GGGCGCGCGGGSGGGGGSSGEGWNAVVVGV 72
Score = 21.9 bits (45), Expect(2) = 8.6
Identities = 15/38 (39%), Positives = 18/38 (46%), Gaps = 7/38 (18%)
Frame = -2
Query: 41 VVVVATMVVVVVAMI-------GWWWWW*GGGGGGGGC 71
VVVV +VVVV A++ G W G GG C
Sbjct: 160 VVVVVVVVVVVAAVVEDLAEKGGMRWLLVFHGSEGGVC 47
Score = 21.2 bits (43), Expect(2) = 8.6
Identities = 4/6 (66%), Positives = 5/6 (82%)
Frame = -3
Query: 20 WGWQWW 25
W W+WW
Sbjct: 171 WRWRWW 154
>BP049447
Length = 478
Score = 42.7 bits (99), Expect = 4e-05
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = -1
Query: 56 GWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*G 108
GWWW GGGGGGG GR WWW W WW*G
Sbjct: 265 GWWWCCGGGGGGGGLEGRFEK-------------------GCWWW-WWWWW*G 167
Score = 36.6 bits (83), Expect = 0.003
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Frame = -1
Query: 19 WW-----GWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*G 63
WW GW W G GGGGG G WWWWW*G
Sbjct: 286 WWVNFGSGWWWCCGGGGGGGGLEGR----------FEKGCWWWWWWWW*G 167
Score = 30.4 bits (67), Expect = 0.19
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 91 VMVVVAIWWWLWCQWW 106
+ VVV +WWW W WW
Sbjct: 269 IWVVVVLWWWWW--WW 228
Score = 29.6 bits (65), Expect = 0.33
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = -3
Query: 40 LVVVVATMVVVVVAMIGWWWWW 61
L +V + VVV + WWWWW
Sbjct: 293 LFMVGEFWIWVVVVLWWWWWWW 228
Score = 28.9 bits (63), Expect = 0.56
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 18 WWWGWQWW* 26
WWW W WW*
Sbjct: 196 WWWWWWWW* 170
Score = 27.3 bits (59), Expect(2) = 0.45
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = -3
Query: 14 VVIGWWWGWQWW 25
VV+ WWW W WW
Sbjct: 260 VVVLWWW-WWWW 228
Score = 26.6 bits (57), Expect = 2.8
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2
Query: 31 GGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGG 70
GGGG V +VVVV + G GGGGGGGG
Sbjct: 264 GGGG---------VVVVVVVVEVLKGDLRRVVGGGGGGGG 172
Score = 26.2 bits (56), Expect = 3.7
Identities = 11/23 (47%), Positives = 12/23 (51%), Gaps = 5/23 (21%)
Frame = -1
Query: 99 WWL-----WCQWW*GGGGSGSGG 116
WW+ W WW GGG G GG
Sbjct: 286 WWVNFGSGW--WWCCGGGGGGGG 224
Score = 25.8 bits (55), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -1
Query: 17 GWWWGWQWW 25
G WW W WW
Sbjct: 202 GCWWWWWWW 176
Score = 20.4 bits (41), Expect(2) = 0.45
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 28 GVGGGGGDSG 37
G GGGGG+ G
Sbjct: 192 GGGGGGGEEG 163
>AV409412
Length = 426
Score = 30.8 bits (68), Expect(2) = 6e-05
Identities = 13/34 (38%), Positives = 14/34 (40%)
Frame = -1
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW 61
G+GG G G V IGWWWWW
Sbjct: 186 GIGGSGRSLGR*WGRRRCLEQPVTAPEIGWWWWW 85
Score = 30.4 bits (67), Expect(2) = 6e-05
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 98 WWWLWCQWW*GGG 110
WWW W WW GG
Sbjct: 93 WWWWWMTWWCCGG 55
Score = 30.4 bits (67), Expect = 0.19
Identities = 36/101 (35%), Positives = 43/101 (41%), Gaps = 4/101 (3%)
Frame = -2
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGS----GGDR 118
GG GGG G VA VDG G+ G G +R W + + GG G GG R
Sbjct: 362 GGEEGGGVGGEVADEVDGEGD-GDGREREGEGER*W---SREGFLDGGREGEEGIVGGAR 195
Query: 119 VVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
V A +V G D GGGG + + GGGGG
Sbjct: 194 VDAGLV----GQEGV*ADDGGGGDA*NNQ*QHQK*GGGGGG 84
Score = 28.5 bits (62), Expect = 0.74
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 16 IGWWWGWQWW 25
IGWWW W WW
Sbjct: 105 IGWWW-WWWW 79
Score = 26.9 bits (58), Expect = 2.1
Identities = 15/29 (51%), Positives = 17/29 (57%)
Frame = -2
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRV 91
GGGGGGG G +GGG GG +D V
Sbjct: 389 GGGGGGGEEGGE----EGGGVGGEVADEV 315
Score = 25.8 bits (55), Expect = 4.8
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1
Query: 57 WWWWW 61
WWWWW
Sbjct: 93 WWWWW 79
>TC9962 similar to UP|Q8L7Z6 (Q8L7Z6) AT3g54680/T5N23_40, partial (21%)
Length = 585
Score = 42.0 bits (97), Expect = 6e-05
Identities = 28/81 (34%), Positives = 32/81 (38%), Gaps = 6/81 (7%)
Frame = -1
Query: 32 GGGDSGDRLVVVVATMVVVVVAMIGWW-----WWW*GGGGGGG-GCGRVAATVDGGGNGG 85
GGGD G V VVV VA+ WW W W G G G G G V +
Sbjct: 369 GGGDPGHVGSGWVGK-VVVAVAVQAWWGA*RVWEWVGSGRGSGHGVCWVRKQQNRKRKRM 193
Query: 86 GGSDRVMVVVAIWWWLWCQWW 106
++ WWW WC WW
Sbjct: 192 KKKEQEKGSWMGWWWWWCSWW 130
Score = 28.1 bits (61), Expect = 0.96
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = -1
Query: 67 GGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSG 115
GGG G V G+G G V V V WW W G G GSG
Sbjct: 369 GGGDPGHV-------GSGWVGKVVVAVAVQAWWGA*RVWEWVGSGRGSG 244
Score = 27.3 bits (59), Expect = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
Frame = -1
Query: 16 IGWWWGW-QWW 25
+GWWW W WW
Sbjct: 162 MGWWWWWCSWW 130
>TC19121 similar to UP|ENAH_MOUSE (Q03173) Enabled protein homolog (NPC
derived proline-rich protein 1) (NDPP-1), partial (3%)
Length = 414
Score = 42.0 bits (97), Expect = 6e-05
Identities = 26/69 (37%), Positives = 29/69 (41%), Gaps = 9/69 (13%)
Frame = -1
Query: 59 WWW*GGGGGGGGCGRVAATV---DGGGNGGGGSDRVMVVVAIWWWLWCQ------WW*GG 109
W W GG GGG G + DG G+G G R V A WW +W WW
Sbjct: 222 WCWCGGTGGGSGAWEFSWASWGWDGDGSGWWGGFRCRV--AFWWSVWWSGWVGFLWWIWW 49
Query: 110 GGSGSGGDR 118
SGS DR
Sbjct: 48 WASGSATDR 22
Score = 26.2 bits (56), Expect = 3.7
Identities = 14/53 (26%), Positives = 17/53 (31%), Gaps = 5/53 (9%)
Frame = -1
Query: 17 GWWWGWQ-----WW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG 64
GWW G++ WW V G V + W WWW G
Sbjct: 138 GWWGGFRCRVAFWWSVWWSGW-------------------VGFLWWIWWWASG 37
>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
Length = 505
Score = 42.0 bits (97), Expect = 6e-05
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 28/74 (37%)
Frame = -3
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDR----------------------------VMVV 94
GGGGGGGG GR + GGG GG R V VV
Sbjct: 281 GGGGGGGGGGRRSRGSGGGGTNGGRRGRGKGGKRVGRG*GSRE*CRQGGRKWWWEVVAVV 102
Query: 95 VAIWWWLWCQWW*G 108
WWW W WW G
Sbjct: 101 WRRWWWWW--WWCG 66
Score = 29.6 bits (65), Expect = 0.33
Identities = 44/151 (29%), Positives = 47/151 (30%), Gaps = 28/151 (18%)
Frame = -3
Query: 58 WWWW*GGGGGGGGCGRVAAT--VDGGGNGGGGSDRVMVVVAIW---WWLW---CQWW*GG 109
W W G G GG GR GG G G +IW W +W *G
Sbjct: 443 WGRWKRGARGRGGSGRSRGRRRCSRGGRGRG---------SIWRRGGWRRRGRSRWR*GR 291
Query: 110 GGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGG-----GGDRV-- 162
G SG GG GGGGG + G NGG GG RV
Sbjct: 290 GRSGGGG--------------------GGGGGGRRSRGSGGGGTNGGRRGRGKGGKRVGR 171
Query: 163 -------------VVVVLVVAVVTIEWWRRW 180
VVAVV WW W
Sbjct: 170 G*GSRE*CRQGGRKWWWEVVAVVWRRWWWWW 78
Score = 28.5 bits (62), Expect = 0.74
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 48 VVVVVAMIGWWWWW 61
VV VV WWWWW
Sbjct: 116 VVAVVWRRWWWWWW 75
Score = 27.7 bits (60), Expect = 1.3
Identities = 33/102 (32%), Positives = 38/102 (36%), Gaps = 6/102 (5%)
Frame = -1
Query: 63 GGG----GGGGGCGRVAATVDGGGNGG--GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGG 116
GGG GGG G G VA V G GG + V A G G G G
Sbjct: 328 GGGEAEVGGGEGEGGVAEEVAAAAEVGEVGGVEEVGPTAADE---------GEGREGRGW 176
Query: 117 DRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGG 158
D VV +GG GG ++ +G G GGGG
Sbjct: 175 DAGEEVENDVVR-------EGGNGGGRLLRWFGDGGGGGGGG 71
Score = 27.7 bits (60), Expect = 1.3
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -3
Query: 47 MVVVVVAMIGWWWWW*G 63
+V VV WWWWW G
Sbjct: 116 VVAVVWRRWWWWWWWCG 66
Score = 25.4 bits (54), Expect = 6.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 59 WWW*GGGGGGGG 70
W+ GGGGGGGG
Sbjct: 106 WFGDGGGGGGGG 71
>TC14921 similar to UP|Q8L949 (Q8L949) Plastid protein, partial (73%)
Length = 1030
Score = 31.2 bits (69), Expect(2) = 2e-04
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
Frame = -2
Query: 57 WWWWW*GG---GGGGGGCGR---VAATVDGGGNG 84
WWWWW GG G C + ++ ++G GNG
Sbjct: 123 WWWWWRRAAL*GGWSGVCRKKRELSPLLNGSGNG 22
Score = 28.5 bits (62), Expect(2) = 2e-04
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2
Query: 18 WWWGWQWW 25
WWW W WW
Sbjct: 132 WWWWWWWW 109
Score = 25.0 bits (53), Expect = 8.2
Identities = 7/15 (46%), Positives = 8/15 (52%)
Frame = -2
Query: 18 WWWGWQWW*VGVGGG 32
WWW W W + GG
Sbjct: 129 WWWWWWWRRAAL*GG 85
Score = 25.0 bits (53), Expect = 8.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSD 89
GGGGGGG G +GG G S+
Sbjct: 134 GGGGGGGGGEEPHCEEGGVACAGRSE 57
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 40.4 bits (93), Expect = 2e-04
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1
Query: 51 VVAMIGWWWWW*GGGGGGGG 70
V ++G WWWW* GGGGGGG
Sbjct: 105 VSGLLGRWWWW*VGGGGGGG 46
Score = 33.1 bits (74), Expect = 0.030
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 15 VIGWWWGWQWW*VGVGGGGG 34
++G WW WW*VG GGGGG
Sbjct: 96 LLGRWW---WW*VGGGGGGG 46
Score = 27.7 bits (60), Expect = 1.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 90 RVMVVVAIWWWLWCQWW*GGGGSGSG 115
RV ++ WWW W* GGG G G
Sbjct: 108 RVSGLLGRWWW-----W*VGGGGGGG 46
>AV427333
Length = 387
Score = 40.4 bits (93), Expect = 2e-04
Identities = 37/109 (33%), Positives = 40/109 (35%), Gaps = 10/109 (9%)
Frame = -3
Query: 58 WWWW*GGGGGGGGCGRVAATVDGG-----GNGGGGSDRVMVVVAIWWWLWCQWW*GGGG- 111
WW+ G GG GGG GR T GG G+GGG + C GGGG
Sbjct: 379 WWFGEGEGGSGGGGGR---TCGGGVIG*CGDGGGRT--------------C----GGGGV 263
Query: 112 ----SGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGG 156
G GGD DGGG GC E EG GG
Sbjct: 262 NG*DDGGGGD------------------DGGGEGCPRGGGANE*EGGGG 170
Score = 35.0 bits (79), Expect = 0.008
Identities = 25/58 (43%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -3
Query: 105 WW*GGG--GSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGD 160
WW G G GSG GG R V IG DGGG C V G +GGGG D
Sbjct: 379 WWFGEGEGGSGGGGGRTCGGGV------IG*CGDGGGRTCG--GGGVNG*DDGGGGDD 230
>TC8581 similar to UP|Q94II4 (Q94II4) NAM-like protein, partial (9%)
Length = 1158
Score = 40.4 bits (93), Expect = 2e-04
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = +2
Query: 58 WWWW*GGGG----------GGGGCGRVAATVDGGGNGGG-GSDRVMVVVAIWWWLWCQWW 106
WWWW G GG GCG V + G G G+D +WWW W WW
Sbjct: 209 WWWWIGIGGLV*H*QPLCSELFGCGGVRSGKSRGSAGPEPGNDE------LWWWWWWWWW 370
Score = 28.5 bits (62), Expect = 0.74
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +2
Query: 18 WWWGWQWW 25
WWW W WW
Sbjct: 344 WWWWWWWW 367
Score = 28.5 bits (62), Expect = 0.74
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +2
Query: 18 WWWGWQWW 25
WWW W WW
Sbjct: 347 WWWWWWWW 370
Score = 25.8 bits (55), Expect = 4.8
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +2
Query: 57 WWWWW 61
WWWWW
Sbjct: 344 WWWWW 358
Score = 25.8 bits (55), Expect = 4.8
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +2
Query: 57 WWWWW 61
WWWWW
Sbjct: 353 WWWWW 367
Score = 25.8 bits (55), Expect = 4.8
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +2
Query: 57 WWWWW 61
WWWWW
Sbjct: 347 WWWWW 361
>TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-binding,
abscisic acid-inducible protein, complete
Length = 972
Score = 40.0 bits (92), Expect = 2e-04
Identities = 34/99 (34%), Positives = 37/99 (37%)
Frame = +2
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
G GGGGGG G +GG GGGGS + GGGG G GG
Sbjct: 596 GRGGGGGGGGYGGGRREGGYGGGGGSR----------------YSGGGGGGYGGSGG--- 718
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDR 161
G +GGGGG G GGGG R
Sbjct: 719 ------GGYGGRREGGGGG--------YGGSREGGGGSR 793
Score = 23.9 bits (50), Expect(2) = 1.1
Identities = 17/44 (38%), Positives = 23/44 (51%), Gaps = 7/44 (15%)
Frame = +2
Query: 64 GGGGGGGCGRVAATVDGGGN---GGGGSDR----VMVVVAIWWW 100
GGGGG G R +GGG GGS R ++ +V+I +W
Sbjct: 743 GGGGGYGGSR-----EGGGGSRYSSGGSWRD*SFMIFLVSIMYW 859
Score = 22.3 bits (46), Expect(2) = 1.1
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = +1
Query: 55 IGWWWW 60
I WWWW
Sbjct: 652 IRWWWW 669
Score = 21.9 bits (45), Expect(2) = 5.0
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1
Query: 58 WWWW* 62
WWWW*
Sbjct: 658 WWWW* 672
Score = 21.9 bits (45), Expect(2) = 5.0
Identities = 11/38 (28%), Positives = 18/38 (46%)
Frame = +2
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWW 100
GGG GG G + GG+ S + +V ++W+
Sbjct: 749 GGGYGGSREGGGGSRYSSGGSWRD*SFMIFLVSIMYWF 862
>AV410275
Length = 431
Score = 38.5 bits (88), Expect = 7e-04
Identities = 32/95 (33%), Positives = 43/95 (44%), Gaps = 22/95 (23%)
Frame = -3
Query: 39 RLVVVVATM------VVVVV---AMIGW---WWWW*GGGGGG-------GGCGRVAATVD 79
++VVVV ++ VVVVV A++ W WWWW G G GG + +
Sbjct: 312 KVVVVVFSLH*MVWKVVVVVFS*AVVCWDFGWWWWLGVREKGWF*LFEFGGFLQF*LRIF 133
Query: 80 GGGNGGGGSDRVMVVVAIW---WWLWCQWW*GGGG 111
GG + + + IW WW W WW GGGG
Sbjct: 132 *AE---GGVEMLRWL*WIWGP*WWWWWWWWWGGGG 37
Score = 38.1 bits (87), Expect = 0.001
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Frame = -1
Query: 17 GWWWGW---QWW*VGV--GGGGGDSGDRLVVVVATMVVVVVAMIGWW-----WWW*GG-- 64
G WW W + W G+ GGGG + G R ++ V + G++ W *GG
Sbjct: 272 GRWWWWCFLEQWFAGILGGGGGWE*GRRGGSDCLSLGVFFNSN*GYFKQREVWRC*GGYD 93
Query: 65 -----GGGGGGCGRVAATVDGGGNGGGGSDRVMV 93
GGGGG GGG GGGG D V++
Sbjct: 92 GFGDHDGGGGG---------GGGGGGGGRD*VLI 18
Score = 33.5 bits (75), Expect = 0.023
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 17/77 (22%)
Frame = -3
Query: 7 VAAVAMKVVIGWWWGWQWW*VGVGGG--------GGDSGDRLVVVVATMVVVVVAMI--- 55
V V V+ W +GW WW +GV GG L + A V ++ +
Sbjct: 264 VVVVFS*AVVCWDFGWWWW-LGVREKGWF*LFEFGGFLQF*LRIF*AEGGVEMLRWL*WI 88
Query: 56 ------GWWWWW*GGGG 66
WWWWW GGGG
Sbjct: 87 WGP*WWWWWWWWWGGGG 37
Score = 30.4 bits (67), Expect(2) = 0.005
Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 26/93 (27%)
Frame = -1
Query: 98 WWWLWC---QWW*G--GGGS----GSGGDRVVAAMVVVVLAMIGWW-------------- 134
WWW WC QW+ G GGG G G ++ V + G++
Sbjct: 266 WWW-WCFLEQWFAGILGGGGGWE*GRRGGSDCLSLGVFFNSN*GYFKQREVWRC*GGYDG 90
Query: 135 ---*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
DGGGGG G G GGGG D V++
Sbjct: 89 FGDHDGGGGG---------GGGGGGGGRD*VLI 18
Score = 24.3 bits (51), Expect(2) = 0.005
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -2
Query: 65 GGGGGGCGRVAAT--VDGGGNG 84
G GGGCG + A V+GGG G
Sbjct: 319 GTEGGGCGFLFALNGVEGGGGG 254
>TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein {Danio
rerio;} , partial (5%)
Length = 678
Score = 37.4 bits (85), Expect = 0.002
Identities = 37/109 (33%), Positives = 42/109 (37%)
Frame = -2
Query: 61 W*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVV 120
W G GGGGGG RV G GGG S V G S G V+
Sbjct: 677 WGGVGGGGGGGDRV-------GVGGGASSDV------------------SGVDSRGSGVL 573
Query: 121 AAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVV 169
+ D G GG MVA G G+GG GG+ V V+VV
Sbjct: 572 SIE------------DIGRGGGGMVATPYLGGGDGGCGGEGSGVWVIVV 462
Score = 37.0 bits (84), Expect = 0.002
Identities = 54/185 (29%), Positives = 67/185 (36%), Gaps = 48/185 (25%)
Frame = -2
Query: 24 WW*VGVGGGGGD--------SGDRLVVVVATMVVVVVAMIGWWWWW*GG---------GG 66
W VG GGGGGD S D V V+ + IG GG GG
Sbjct: 677 WGGVGGGGGGGDRVGVGGGASSDVSGVDSRGSGVLSIEDIGR-----GGGGMVATPYLGG 513
Query: 67 GGGGCGRVAA--------------------TVDGGGNG-------GGGSDRVMVVVAIWW 99
G GGCG + V+GGG+G G + MVV +
Sbjct: 512 GDGGCGGEGSGVWVIVVRELGGDGVVSDVRCVEGGGSGALSVADMSKGGEGGMVVTPYF- 336
Query: 100 WLWCQWW*GGGGSGSGGD----RVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNG 155
GGGG G GGD A+ ++ L I + GGG V +G G
Sbjct: 335 --------GGGGGGCGGDGREQGKEASPDIIALPAIT---EAGGG----VVGGRDGGGGC 201
Query: 156 GGGGD 160
GGGG+
Sbjct: 200 GGGGE 186
Score = 34.7 bits (78), Expect = 0.010
Identities = 32/119 (26%), Positives = 42/119 (34%), Gaps = 25/119 (21%)
Frame = -2
Query: 65 GGGGGGCG---------------RVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GG 109
GGGGGGCG + A + GG GG D GG
Sbjct: 335 GGGGGGCGGDGREQGKEASPDIIALPAITEAGGGVVGGRD------------------GG 210
Query: 110 GGSGSGGDR----------VVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGG 158
GG G GG+ + ++ + A+ G +GGGGG + G GG G
Sbjct: 209 GGCGGGGEGEQGRETSPTDLETFEIIALPAIKGA--EGGGGGGGRALSDFGGVEGGGSG 39
Score = 33.5 bits (75), Expect = 0.023
Identities = 35/124 (28%), Positives = 45/124 (36%)
Frame = -2
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGG G G + ++ + A+ GG GGGGCG GGG G G
Sbjct: 332 GGGGGCGGDGREQGKEASPDIIALPAITEAGGGVVGGRDGGGGCG-------GGGEGEQG 174
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
+ + + + G G G GG R L+ G GG G S
Sbjct: 173 RETSPTDLETFEIIALPAIKGAEGGGGGGGR--------ALSDFGGVEGGGSGALSAEDI 18
Query: 148 TVEG 151
VEG
Sbjct: 17 GVEG 6
Score = 25.0 bits (53), Expect = 8.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1
Query: 16 IGWWWGWQW 24
+GW WGW W
Sbjct: 678 MGWGWGWGW 652
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.332 0.150 0.597
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,940,869
Number of Sequences: 28460
Number of extensions: 85324
Number of successful extensions: 8576
Number of sequences better than 10.0: 644
Number of HSP's better than 10.0 without gapping: 2928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6403
length of query: 186
length of database: 4,897,600
effective HSP length: 85
effective length of query: 101
effective length of database: 2,478,500
effective search space: 250328500
effective search space used: 250328500
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 52 (24.6 bits)
Lotus: description of TM0288.5