BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0121a.2
(284 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP066856 69 9e-13
TC9308 weakly similar to UP|Q9SQ55 (Q9SQ55) Nuclear RNA binding ... 64 3e-11
TC10343 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (... 57 3e-09
TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protei... 57 3e-09
BP043633 55 2e-08
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part... 54 3e-08
TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment),... 54 3e-08
TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycop... 53 7e-08
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 52 9e-08
TC19908 similar to GB|CAA60022.1|791150|VURNEXT26 extensin-like ... 52 1e-07
TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding p... 51 2e-07
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 51 3e-07
AU251550 50 4e-07
TC14982 similar to UP|Q9FPI2 (Q9FPI2) At1g17620, partial (32%) 50 4e-07
AV407983 49 1e-06
AV426815 49 1e-06
TC19964 similar to UP|Q40363 (Q40363) NuM1 protein, partial (11%) 49 1e-06
AV410227 49 1e-06
BI418438 49 1e-06
BP043764 48 2e-06
>BP066856
Length = 485
Score = 68.9 bits (167), Expect = 9e-13
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -2
Query: 99 PVTHSGEAVEEYMRWYGGVSHRFIIPDDRREEFSAV 134
P T+SGE VE+YMRWY GVSHRFIIPDDRREE SAV
Sbjct: 436 PATYSGEXVEDYMRWYSGVSHRFIIPDDRREELSAV 329
Score = 35.4 bits (80), Expect = 0.011
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 180 QPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPS 217
+PLP P +P P LPP R P+ L P PLPP P+
Sbjct: 57 RPLPAPLRPLGP*ALPP--RAPSPRALPPRPLPPGAPA 164
Score = 25.8 bits (55), Expect = 8.8
Identities = 14/34 (41%), Positives = 17/34 (49%), Gaps = 3/34 (8%)
Frame = +3
Query: 166 TTATIALPLSPSPPQPLPP---PPQPTPPPLLPP 196
+T + PL P P LPP P+ PP LPP
Sbjct: 51 STRPLPAPLRPLGP*ALPPRAPSPRALPPRPLPP 152
>TC9308 weakly similar to UP|Q9SQ55 (Q9SQ55) Nuclear RNA binding protein A,
partial (9%)
Length = 562
Score = 63.9 bits (154), Expect = 3e-11
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3
Query: 102 HSGEAVEEYMRWYGGVSHRFIIPDDRREEFSAV 134
+ GEAVE+YMRWY VSHRFIIPDDRREEFSAV
Sbjct: 3 YPGEAVEDYMRWYSAVSHRFIIPDDRREEFSAV 101
Score = 37.0 bits (84), Expect = 0.004
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = -2
Query: 179 PQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLPLLPP 238
P+PLP P +P P LPP PLPP+ PS + G R LP LPP
Sbjct: 450 PRPLPAPLRPLGPRALPP------------RPLPPRAPSAGAPSAGAPSPRALPPRPLPP 307
Query: 239 PPL 241
L
Sbjct: 306 RAL 298
Score = 33.5 bits (75), Expect = 0.042
Identities = 20/46 (43%), Positives = 23/46 (49%), Gaps = 3/46 (6%)
Frame = -2
Query: 173 PLSPS--PPQPLPP-PPQPTPPPLLPPLYRHHQPQPLSPPPLPPQP 215
PL P PP+PLPP P P P R P+PL P L P+P
Sbjct: 423 PLGPRALPPRPLPPRAPSAGAPSAGAPSPRALPPRPLPPRALSPRP 286
Score = 30.4 bits (67), Expect = 0.36
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = -2
Query: 176 PSPPQPLPP---PPQPTP---PPLLPPLYRHHQPQPLSPPPLPPQ 214
P+P +PL P PP+P P P P P+ L P PLPP+
Sbjct: 438 PAPLRPLGPRALPPRPLPPRAPSAGAPSAGAPSPRALPPRPLPPR 304
>TC10343 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (Fibrillarin
2) (AtFib2), partial (85%)
Length = 1116
Score = 57.4 bits (137), Expect = 3e-09
Identities = 37/78 (47%), Positives = 42/78 (53%)
Frame = -2
Query: 163 STTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTT 222
STTT +P P PP+P P PP P PPPL PP R + PL PPPLPP P + +
Sbjct: 251 STTTLLPPFIP-PPLPPRPPPRPPLPPPPPLPPP--RALKGVPL-PPPLPPPSPLPLPLS 84
Query: 223 IGFCHHRHLPLPLLPPPP 240
PLPL PPPP
Sbjct: 83 ---------PLPLNPPPP 57
Score = 43.1 bits (100), Expect = 5e-05
Identities = 25/51 (49%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = -2
Query: 173 PLSPSPPQPLP--------PPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQP 215
PL P PP P P PPP P P PL PL P PL+PPP PP+P
Sbjct: 185 PLPPPPPLPPPRALKGVPLPPPLPPPSPLPLPL----SPLPLNPPP-PPRP 48
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/84 (32%), Positives = 31/84 (36%)
Frame = -2
Query: 158 KFPQNSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPS 217
K P +T T+ P P P P PPP P PPP PP PP
Sbjct: 275 KIPSCL*GSTTTLLPPFIPPPLPPRPPPRPPLPPP-------------------PPLPPP 153
Query: 218 FVVTTIGFCHHRHLPLPLLPPPPL 241
+ + LP PL PP PL
Sbjct: 152 RALKGV------PLPPPLPPPSPL 99
>TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protein, partial
(25%)
Length = 1077
Score = 57.4 bits (137), Expect = 3e-09
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 18/87 (20%)
Frame = +1
Query: 173 PLSPSPPQP---LPPPPQPTPPPLLPPLYRHHQPQPL--------SPPPL-------PPQ 214
PL P+P QP +P P QP+PPPLLP ++ P PL SPPPL PP
Sbjct: 466 PLIPNPFQPPPLIPNPFQPSPPPLLPDPFQPPSPPPLFPNPFQPPSPPPLIPNPFQPPPS 645
Query: 215 PPSFVVTTIGFCHHRHLPLPLLPPPPL 241
PP F+ + P PL P PP+
Sbjct: 646 PPPFIPNPFQPPPSKQPPSPLFPFPPI 726
Score = 44.3 bits (103), Expect = 2e-05
Identities = 35/104 (33%), Positives = 42/104 (39%), Gaps = 7/104 (6%)
Frame = +1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLP 232
PL P+P QP P PPPL+P + QP PL P P P PP + P
Sbjct: 409 PLIPNPFQPPLVPNPFQPPPLIPNPF---QPPPLIPNPFQPSPPPLLPDPF----QPPSP 567
Query: 233 LPLLP-------PPPLQHCLHNDYCHRHNHNQLHHPSQSPPPLV 269
PL P PPPL + N + P SPPP +
Sbjct: 568 PPLFPNPFQPPSPPPL---IPNPF----------QPPPSPPPFI 660
Score = 43.5 bits (101), Expect = 4e-05
Identities = 30/80 (37%), Positives = 32/80 (39%), Gaps = 12/80 (15%)
Frame = +1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPL------------SPPPLPPQPPSFVV 220
PL P+P QP P PP P P PP + P PL PPP PP PP F
Sbjct: 610 PLIPNPFQPPPSPPPFIPNPFQPPPSKQ-PPSPLFPFPPIVIPGLTPPPPPPPPPPFFP- 783
Query: 221 TTIGFCHHRHLPLPLLPPPP 240
P P L PPP
Sbjct: 784 -----------PFPPLFPPP 810
Score = 38.5 bits (88), Expect = 0.001
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 178 PPQPLPPPP---QPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLP 234
PP P PPP P PPL+P + QP PL P P QPP + LP P
Sbjct: 385 PPIPFFPPPLIPNPFQPPLVPNPF---QPPPLIPNPF--QPPPLIPNPFQPSPPPLLPDP 549
Query: 235 LLPPPP 240
PP P
Sbjct: 550 FQPPSP 567
Score = 35.4 bits (80), Expect = 0.011
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +1
Query: 173 PLSPSPPQPLP---PPPQ-PTPPPLLPPLYRHHQPQPLSPPPLPP 213
PL P PP +P PPP P PPP PP PL PPP P
Sbjct: 703 PLFPFPPIVIPGLTPPPPPPPPPPFFPPF------PPLFPPPGRP 819
Score = 31.2 bits (69), Expect = 0.21
Identities = 15/28 (53%), Positives = 16/28 (56%), Gaps = 1/28 (3%)
Frame = +1
Query: 170 IALPLSPSPPQPLPPPP-QPTPPPLLPP 196
I +P PP P PPPP P PPL PP
Sbjct: 724 IVIPGLTPPPPPPPPPPFFPPFPPLFPP 807
Score = 27.7 bits (60), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPL 197
P P PP PP P PPP PP+
Sbjct: 751 PPPPPPPPFFPPFPPLFPPPGRPPI 825
>BP043633
Length = 542
Score = 54.7 bits (130), Expect = 2e-08
Identities = 34/86 (39%), Positives = 37/86 (42%), Gaps = 3/86 (3%)
Frame = +1
Query: 185 PPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLP---LLPPPPL 241
PPQP PPP PP HH P PPP PPQ P + + H P P PPPP
Sbjct: 241 PPQPPPPPPPPPDPNHHHHFPQIPPPHPPQAP-WYSPQFQYHHPSQTPSPPPQWGPPPPP 417
Query: 242 QHCLHNDYCHRHNHNQLHHPSQSPPP 267
N Y +HP Q PPP
Sbjct: 418 PPPPSNPYS--------YHPKQFPPP 471
Score = 51.2 bits (121), Expect = 2e-07
Identities = 26/58 (44%), Positives = 28/58 (47%)
Frame = +1
Query: 175 SPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLP 232
+PSPP PPP P PPP P Y Q P PPP PP PP F H H+P
Sbjct: 376 TPSPPPQWGPPPPPPPPPSNPYSYHPKQFPPPPPPPRPPHPPH-----PQFPPHSHIP 534
Score = 48.1 bits (113), Expect = 2e-06
Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 17/82 (20%)
Frame = +1
Query: 176 PSPPQPLPPPPQPT--------PPPLLP------PLYRHHQP-QPLSPPPL--PPQPPSF 218
P PP P PPPP P PPP P P +++H P Q SPPP PP PP
Sbjct: 244 PQPPPPPPPPPDPNHHHHFPQIPPPHPPQAPWYSPQFQYHHPSQTPSPPPQWGPPPPPPP 423
Query: 219 VVTTIGFCHHRHLPLPLLPPPP 240
+ H + P P PPPP
Sbjct: 424 PPSNPYSYHPKQFPPP--PPPP 483
Score = 40.0 bits (92), Expect = 5e-04
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 196 PLYRHHQP----QPLSPPPLPPQPPSFVVTTIGFCHHRHLPLPLLPPPPLQHCLHNDYCH 251
P+ + QP +P PPP PP PP HH H P + PP P Q ++
Sbjct: 202 PMDSYQQPHGYMRPPQPPPPPPPPPD-------PNHHHHFP-QIPPPHPPQAPWYSP--- 348
Query: 252 RHNHNQLHHPSQSPPP 267
Q HHPSQ+P P
Sbjct: 349 ---QFQYHHPSQTPSP 387
Score = 35.4 bits (80), Expect = 0.011
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 163 STTTTATIALPLSPSPPQPLPP---PPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFV 219
S+TTT+ A PP P PP P+ P +LPP+ PPP+P PS
Sbjct: 240 SSTTTSASASAA*SQPPPPFPPNTTATSPSSPVVLPPI--------SVPPPIPDSFPSTA 395
Query: 220 V 220
V
Sbjct: 396 V 398
Score = 30.8 bits (68), Expect = 0.27
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPP 209
P S P Q PPPP P PP H P P PP
Sbjct: 436 PYSYHPKQFPPPPPPPRPP---------HPPHPQFPP 519
>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
Length = 505
Score = 53.9 bits (128), Expect = 3e-08
Identities = 36/99 (36%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Frame = +1
Query: 173 PLSPSPPQPL---PPPPQPTPPPLLP--------PLYRHHQPQPLSPPPLPPQPPSFVVT 221
PL P PP P PPPP P PPPL P PL RH + + P PLPP +
Sbjct: 214 PLVPPPPLPRLLRPPPPPPPPPPLRPRPHRHRLRPLLRHPPRRQMEPLPLPPLLQRRL-- 387
Query: 222 TIGFCHHRHLPLPLLPPPPLQHCLHNDYCHRHNHNQLHH 260
R LPLP LP P H + + H + H
Sbjct: 388 ------PRDLPLPPLPRAPRFHRPQGFHRRKRRHAAVRH 486
Score = 47.4 bits (111), Expect = 3e-06
Identities = 29/63 (46%), Positives = 30/63 (47%)
Frame = +1
Query: 178 PPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLPLLP 237
PP PLP P PPP LP L R P P PPPL P+P HRH PLL
Sbjct: 187 PPFPLPRLPPLVPPPPLPRLLRPPPPPP-PPPPLRPRP------------HRHRLRPLLR 327
Query: 238 PPP 240
PP
Sbjct: 328 HPP 336
Score = 37.0 bits (84), Expect = 0.004
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +3
Query: 177 SPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLPLL 236
SP Q PPPP P P P +H+ PPP PP + T+ H PLP L
Sbjct: 54 SPIQTTPPPPPPPPSP-------NHRNN--LPPPFPPSLTTSFSTSSPASH----PLPSL 194
Query: 237 PPP 239
P P
Sbjct: 195 PSP 203
Score = 36.6 bits (83), Expect = 0.005
Identities = 19/52 (36%), Positives = 24/52 (45%)
Frame = +3
Query: 164 TTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQP 215
T+ T+ A S +PP P PPP +PP PP + P S P P P
Sbjct: 243 TSPTSAAAATSSATPPSPSPPPTSASPP---PPSSTPNGTPPSSSPATTPSP 389
Score = 33.9 bits (76), Expect = 0.032
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +3
Query: 173 PLSPSPPQPLPPPPQPT-----PPPLLPPLYRHHQPQPLSPPPLP--PQPPSFVV 220
P+ +PP P PPPP P PPP P L + PLP P P S V
Sbjct: 57 PIQTTPPPP-PPPPSPNHRNNLPPPFPPSLTTSFSTSSPASHPLPSLPSPSSAAV 218
Score = 32.3 bits (72), Expect = 0.094
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +3
Query: 160 PQNSTTTTATI---ALPLSPSPP--QPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQ 214
P S T+ A A P SPSPP PPPP TP P P P S P P
Sbjct: 237 PPTSPTSAAAATSSATPPSPSPPPTSASPPPPSSTPNGTPPSSSPATTPSP-SRPSTPSS 413
Query: 215 P 215
P
Sbjct: 414 P 416
Score = 28.9 bits (63), Expect = 1.0
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Frame = +3
Query: 163 STTTTATIALPLSPSPPQPLPPPPQPTPPPL---LPPLYRHHQPQPLSPPPLPPQPP 216
ST++ A+ LP PSP P TPP P SPPP PP
Sbjct: 156 STSSPASHPLPSLPSPSSAAVGPTSSTPPTSPTSAAAATSSATPPSPSPPPTSASPP 326
>TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment), partial
(79%)
Length = 1017
Score = 53.9 bits (128), Expect = 3e-08
Identities = 34/95 (35%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = +3
Query: 175 SPSPPQPLPPPPQPTPPPLL---PPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHL 231
SP PP PPPP P P+ PP Y P SPPP PP H+
Sbjct: 156 SPPPPVHSPPPPYEKPHPVYHSPPPPYEKPHPVYHSPPPPPP--------------HKPY 293
Query: 232 PLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQSPP 266
P PPPP + Y H H H H P PP
Sbjct: 294 KYPSPPPPP------HKYPHPHPHPVYHSPPPPPP 380
Score = 51.2 bits (121), Expect = 2e-07
Identities = 38/101 (37%), Positives = 45/101 (43%), Gaps = 9/101 (8%)
Frame = +3
Query: 175 SPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPL--SPPPLPPQ-------PPSFVVTTIGF 225
SP PP P P P+PPP P Y H P P+ SPPP PP+ PP V T
Sbjct: 261 SPPPPPPHKPYKYPSPPPP-PHKYPHPHPHPVYHSPPPPPPKKHYKYSSPPPPVHT---- 425
Query: 226 CHHRHLPLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQSPP 266
H H P+ PPPP+ + + H H H P PP
Sbjct: 426 YPHPH-PVYHSPPPPV-------HTYPHPHPVYHSPPPPPP 524
Score = 42.7 bits (99), Expect = 7e-05
Identities = 34/114 (29%), Positives = 45/114 (38%), Gaps = 21/114 (18%)
Frame = +3
Query: 175 SPSPPQPL-------PPPP---QPTPPPLL----PPLYRHHQPQPL--SPPPLPPQPPSF 218
SP PP P PPPP P P P+ PP++ + P P+ SPPP PP +
Sbjct: 360 SPPPPPPKKHYKYSSPPPPVHTYPHPHPVYHSPPPPVHTYPHPHPVYHSPPPPPPHEKPY 539
Query: 219 VVTTIGFCHHRHLPLPLLPPPPLQHCLHNDYCHR-----HNHNQLHHPSQSPPP 267
+ PPPP H + H H+ H+ +SPPP
Sbjct: 540 KYAS--------------PPPPPVHTYPHPVYHSPPPPVHSPPPPHYYYKSPPP 659
Score = 32.7 bits (73), Expect = 0.072
Identities = 34/105 (32%), Positives = 38/105 (35%), Gaps = 9/105 (8%)
Frame = +2
Query: 142 ILGTLSASMDFPRGSDKFPQNSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHH 201
I T + + P S P +STTTT L S P P P+ P L P H
Sbjct: 302 ITSTPTTQVPSPPPSPSLPLSSTTTT*EALQVLISSTTSSHLPSPSPSLP--LSPTTSSH 475
Query: 202 QPQPLSPPPLPPQPPSFVVTT----IGFC-----HHRHLPLPLLP 237
P P P P S TT I C HLP P LP
Sbjct: 476 LPS-----PTPSLPFSSTTTTT*EAIQICIASTTTSSHLPSPSLP 595
Score = 31.6 bits (70), Expect = 0.16
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Frame = +2
Query: 163 STTTTATIALPLSPSPPQPLP-PPPQPTPP------------PLLPPLYRHHQPQPLSPP 209
+TTTT + +P++ +P +P PPP P+ P L+ H P P
Sbjct: 269 TTTTT*ALQVPITSTPTTQVPSPPPSPSLPLSSTTTT*EALQVLISSTTSSHLPSPSPSL 448
Query: 210 PLPPQPPSFVVTTIGFCHHRHLPLPLLP 237
PL P S H P P LP
Sbjct: 449 PLSPTTSS----------HLPSPTPSLP 502
Score = 26.2 bits (56), Expect = 6.7
Identities = 21/56 (37%), Positives = 23/56 (40%), Gaps = 18/56 (32%)
Frame = +3
Query: 173 PLSPSPPQPLP---------PPPQPT---PPPLL--PPLYRHHQPQP----LSPPP 210
P+ SPP P P PPP P P P+ PP H P P SPPP
Sbjct: 492 PVYHSPPPPPPHEKPYKYASPPPPPVHTYPHPVYHSPPPPVHSPPPPHYYYKSPPP 659
>TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (57%)
Length = 941
Score = 52.8 bits (125), Expect = 7e-08
Identities = 35/105 (33%), Positives = 41/105 (38%), Gaps = 5/105 (4%)
Frame = +1
Query: 175 SPSPPQPLPPPPQ-----PTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHR 229
SP PP P PPPP P P P PP Y + P P SP P PP +++
Sbjct: 190 SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPIPHPPY------------YYK 333
Query: 230 HLPLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQSPPPLVTAITY 274
P P PPP H + H+ S PP A TY
Sbjct: 334 SPPPPTSSPPPPYHYVSPPPPSPSPPPPYHYASPPPPSPSPAPTY 468
Score = 48.1 bits (113), Expect = 2e-06
Identities = 39/109 (35%), Positives = 43/109 (38%), Gaps = 16/109 (14%)
Frame = +1
Query: 175 SPSPPQPLPPPP---QPTPPPLL--PPLYRHHQPQPLSPPPLP------PQPPSFVVTTI 223
SP PP P PPPP Q PPP PP Y + P P SP P P P PPS
Sbjct: 94 SPPPPSPSPPPPYYYQSPPPPSHSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPS------ 255
Query: 224 GFCHHRHLPLPLLP-----PPPLQHCLHNDYCHRHNHNQLHHPSQSPPP 267
P P P PPP H Y ++ P+ SPPP
Sbjct: 256 --------PSPPPPYYYKSPPPPSPIPHPPYYYK----SPPPPTSSPPP 366
Score = 48.1 bits (113), Expect = 2e-06
Identities = 38/122 (31%), Positives = 46/122 (37%), Gaps = 25/122 (20%)
Frame = +1
Query: 173 PLSPSPPQPL----PPPPQPTPPPLL------------PPLYRHHQPQPLSPPPLPP--- 213
P SPSPP P PPPP P P P PP Y + P P SP P PP
Sbjct: 247 PPSPSPPPPYYYKSPPPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSPPPPSPSPPPPYHY 426
Query: 214 --QPPSFVVTTIGFCHHRHLPLPLLPPPPLQHCL----HNDYCHRHNHNQLHHPSQSPPP 267
PP + + P LPPPP + + + P++SPPP
Sbjct: 427 ASPPPPSPSPAPTYIYKSPPPPVKLPPPPYHYTSPPPPSPSPAPTYIYKSPPPPTKSPPP 606
Query: 268 LV 269
V
Sbjct: 607 PV 612
Score = 44.7 bits (104), Expect = 2e-05
Identities = 33/99 (33%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Frame = +1
Query: 175 SPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLP------PQPPSFVVTTIGFCHH 228
SP PP P+P P PP PP Y + P P SP P P P PPS +
Sbjct: 19 SPPPPPPVPKPYYYKSPP--PPPYYYKSPPPPSPSPPPPYYYQSPPPPSHSPPPPYYYKS 192
Query: 229 RHLPLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQSPPP 267
P P PPP + + PS SPPP
Sbjct: 193 PPPPSPSPPPP-------------YYYKSPPPPSPSPPP 270
Score = 40.4 bits (93), Expect = 3e-04
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 30/99 (30%)
Frame = +1
Query: 173 PLSPSPPQPL----PPPPQPTPPP------------LLPPLYRHHQPQPLSPPP------ 210
P SPSPP P PPPP P+P P L PP Y + P P SP P
Sbjct: 391 PPSPSPPPPYHYASPPPPSPSPAPTYIYKSPPPPVKLPPPPYHYTSPPPPSPSPAPTYIY 570
Query: 211 --------LPPQPPSFVVTTIGFCHHRHLPLPLLPPPPL 241
PP PP ++ + PPPP+
Sbjct: 571 KSPPPPTKSPP-PPVYIYAS--------------PPPPI 642
Score = 28.9 bits (63), Expect = 1.0
Identities = 19/56 (33%), Positives = 24/56 (41%), Gaps = 3/56 (5%)
Frame = +2
Query: 216 PSFVVTTIGFCHHRHLPLPLLPPPPLQHCLHNDYCHRH---NHNQLHHPSQSPPPL 268
P + TT HH LPLLPP + H+ + H N LHH + P L
Sbjct: 68 PHHLHTTTNHLHHH---LPLLPPHTTTNLPHHHHILHHLPTTTNHLHHHPRHLPLL 226
Score = 26.6 bits (57), Expect = 5.2
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 13/55 (23%)
Frame = +1
Query: 170 IALPLSP----SPPQPLPPPPQPT------PPPLL---PPLYRHHQPQPLSPPPL 211
+ LP P SPP P P P PT PPP PP+Y + P PPP+
Sbjct: 493 VKLPPPPYHYTSPPPP-SPSPAPTYIYKSPPPPTKSPPPPVYIYASP----PPPI 642
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 52.4 bits (124), Expect = 9e-08
Identities = 30/70 (42%), Positives = 31/70 (43%)
Frame = -1
Query: 171 ALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRH 230
A P P P P PPPP P PPP PPL + P P PPP PP P
Sbjct: 481 APPPPPPRPPPRPPPPYPPPPP*-PPLPPYPPPPPYPPPPRPPPP--------------- 350
Query: 231 LPLPLLPPPP 240
P P PPPP
Sbjct: 349 *PPPPYPPPP 320
Score = 47.4 bits (111), Expect = 3e-06
Identities = 25/44 (56%), Positives = 26/44 (58%), Gaps = 1/44 (2%)
Frame = -1
Query: 173 PLSP-SPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQP 215
PL P PP P PPPP+P PPP PP Y P P PPP PP P
Sbjct: 409 PLPPYPPPPPYPPPPRP-PPP*PPPPY---PPPP*PPPPRPPPP 290
Score = 44.7 bits (104), Expect = 2e-05
Identities = 22/44 (50%), Positives = 23/44 (52%)
Frame = -1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPP 216
P P PP P PPP P PPP PP P P P P PP+PP
Sbjct: 427 PPPP*PPLPPYPPPPPYPPPPRPPPP*PPPPYPPPP*PPPPRPP 296
Score = 43.9 bits (102), Expect = 3e-05
Identities = 23/45 (51%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 173 PLSPSPPQPLPP-PPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPP 216
P P PP P PP PP P PPP PP P P P P PP PP
Sbjct: 400 PYPPPPPYPPPPRPPPP*PPPPYPP-----PP*PPPPRPPPPAPP 281
Score = 43.5 bits (101), Expect = 4e-05
Identities = 28/70 (40%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = -1
Query: 173 PLSPSPPQP--LPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRH 230
P P PP P P PP P PPP PP P P PPP PP P
Sbjct: 445 PPPPYPPPPP*PPLPPYPPPPPYPPP---PRPPPP*PPPPYPPPP--------------- 320
Query: 231 LPLPLLPPPP 240
P P PPPP
Sbjct: 319 *PPPPRPPPP 290
Score = 34.3 bits (77), Expect = 0.025
Identities = 18/42 (42%), Positives = 20/42 (46%), Gaps = 4/42 (9%)
Frame = -1
Query: 173 PLSPSPPQPLPPPPQP----TPPPLLPPLYRHHQPQPLSPPP 210
P P PP P PPPP P PPP +P P +PPP
Sbjct: 376 PPPPRPPPP*PPPPYPPPP*PPPP---------RPPPPAPPP 278
Score = 30.8 bits (68), Expect = 0.27
Identities = 14/27 (51%), Positives = 15/27 (54%), Gaps = 3/27 (11%)
Frame = -1
Query: 173 PLSPSPPQPLPPPPQP---TPPPLLPP 196
P P PP P PPPP+P PPP P
Sbjct: 346 PPPPYPPPP*PPPPRPPPPAPPPRRVP 266
>TC19908 similar to GB|CAA60022.1|791150|VURNEXT26 extensin-like protein
{Vigna unguiculata;} , partial (49%)
Length = 472
Score = 52.0 bits (123), Expect = 1e-07
Identities = 33/76 (43%), Positives = 36/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 173 PLSPSPPQPL----PPPPQPTPPPLLPPLYRHHQPQPLSPPP----LPPQPPSFVVTTIG 224
P SPSPP P PPPP P+PPP P +Y+ P SPPP P PPS
Sbjct: 38 PPSPSPPPPYVYKSPPPPSPSPPP--PYIYKSPPPPSHSPPPPYVYKSPPPPS------- 190
Query: 225 FCHHRHLPLPLLPPPP 240
H H L PPPP
Sbjct: 191 SSHPHHSYLYNSPPPP 238
Score = 45.8 bits (107), Expect = 8e-06
Identities = 35/103 (33%), Positives = 39/103 (36%), Gaps = 10/103 (9%)
Frame = +2
Query: 175 SPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLP------PQPPSFVVTTIGFCHH 228
SP PP PP P+P P PP Y + P P SP P P P PPS
Sbjct: 2 SPPPPYVYKSPPPPSPSP--PPPYVYKSPPPPSPSPPPPYIYKSPPPPS----------- 142
Query: 229 RHLPLP----LLPPPPLQHCLHNDYCHRHNHNQLHHPSQSPPP 267
H P P PPPP H+ Y + SPPP
Sbjct: 143 -HSPPPPYVYKSPPPPSSSHPHHSYLY-----------NSPPP 235
>TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding protein 2,
partial (93%)
Length = 725
Score = 51.2 bits (121), Expect = 2e-07
Identities = 25/48 (52%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 173 PLSPSPPQPLPPPPQP----TPPPLLPPLYRHHQPQPLSPPPLPPQPP 216
P P PP P PPPP P PPP PP R P P PPP PP PP
Sbjct: 470 P*PPPPPPPYPPPPPP*PRDPPPPPYPP-SRRPPPPPYPPPPRPPPPP 330
Score = 47.0 bits (110), Expect = 4e-06
Identities = 29/71 (40%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = -1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSP---PPLPPQPPSFVVTTIGFCHHR 229
P PS P PPPP P PP PP R P P P PP PP PP
Sbjct: 494 PYPPSRRPP*PPPPPPPYPPPPPP*PRDPPPPPYPPSRRPPPPPYPPP------------ 351
Query: 230 HLPLPLLPPPP 240
P P PPPP
Sbjct: 350 --PRPPPPPPP 324
Score = 42.0 bits (97), Expect = 1e-04
Identities = 29/73 (39%), Positives = 31/73 (41%), Gaps = 1/73 (1%)
Frame = -1
Query: 169 TIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPP-SFVVTTIGFCH 227
TI L P PP P P +P P P PP R P P PP PP PP +
Sbjct: 566 TI*LLQFPPPPPPPLP*REPPPSPPYPPSRRPP*PPPPPPPYPPPPPP*PRDPPPPPYPP 387
Query: 228 HRHLPLPLLPPPP 240
R P P PPPP
Sbjct: 386 SRRPPPPPYPPPP 348
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/51 (39%), Positives = 24/51 (46%)
Frame = -1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTI 223
P P P P PPP P+ P PP P P PPP PP P ++ T+
Sbjct: 434 PPPP*PRDPPPPPYPPSRRPPPPP-----YPPPPRPPPPPPPPRAWASFTV 297
Score = 25.8 bits (55), Expect = 8.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 227 HHRHLPLPLLPPPPLQHCLHNDYCHRHNHNQLH 259
HH H L L +H LH+ HRH H LH
Sbjct: 472 HHNHRRLLLHIH---RHRLHSREIHRHRHIHLH 383
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 50.8 bits (120), Expect = 3e-07
Identities = 32/90 (35%), Positives = 38/90 (41%), Gaps = 10/90 (11%)
Frame = +2
Query: 160 PQNSTTTTATIALPLSPSPP---------QPLPPPPQPTPPPLLPPLYRHHQPQPL-SPP 209
P NS TT+ P +P PP Q PPP Q +PPP P P P+ SPP
Sbjct: 191 PSNSPTTSPAPPTPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPP 370
Query: 210 PLPPQPPSFVVTTIGFCHHRHLPLPLLPPP 239
P+ PP +T P P PPP
Sbjct: 371 PVQSTPPPAPAST---------PPPASPPP 433
Score = 45.8 bits (107), Expect = 8e-06
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 153 PRGSDKFPQNSTTTTATIALPLSPSPPQPLPPPP-QPTPPPLLPPLYRHHQPQPLSPPPL 211
P S P S+ A+ P SPP PPP Q TPPP P P SPPP
Sbjct: 272 PAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPA 451
Query: 212 PPQPPS 217
P PP+
Sbjct: 452 TPPPPA 469
Score = 42.7 bits (99), Expect = 7e-05
Identities = 30/84 (35%), Positives = 35/84 (40%), Gaps = 3/84 (3%)
Frame = +2
Query: 160 PQNSTTTTATIALP--LSPSPPQPLPPP-PQPTPPPLLPPLYRHHQPQPLSPPPLPPQPP 216
P ST A + P SP P Q PPP P TPPP PP + P P +PPP PP
Sbjct: 311 PPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPF---SPPPATPPPPAATPP 481
Query: 217 SFVVTTIGFCHHRHLPLPLLPPPP 240
+ P+P P P
Sbjct: 482 PALT-----------PVPATSPAP 520
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +2
Query: 153 PRGSDKFPQNSTTTTATIALPL-SPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPL 211
P S P S+ + P+ S PP P PP +PPP PP P PP L
Sbjct: 311 PPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAATPPPAL 490
Query: 212 PPQP 215
P P
Sbjct: 491 TPVP 502
Score = 37.7 bits (86), Expect = 0.002
Identities = 22/65 (33%), Positives = 26/65 (39%), Gaps = 11/65 (16%)
Frame = +2
Query: 160 PQNSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPL-----------YRHHQPQPLSP 208
P + +T A P SPP PPPP TPPP L P+ + P P
Sbjct: 386 PPPAPASTPPPASPPPFSPPPATPPPPAATPPPALTPVPATSPAPAPAKVKSKSPAPAPA 565
Query: 209 PPLPP 213
P L P
Sbjct: 566 PALAP 580
Score = 28.5 bits (62), Expect = 1.4
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +3
Query: 183 PPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLPLLPP 238
PP Q P LLP + P PL PL +P S HHR LP+P+ PP
Sbjct: 492 PPSRQLLPLRLLPR*RANPLPLPL---PLHWRPWSR-------SHHRKLPVPVSPP 629
Score = 26.9 bits (58), Expect = 4.0
Identities = 21/53 (39%), Positives = 23/53 (42%), Gaps = 5/53 (9%)
Frame = +3
Query: 172 LPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQP--LSPPPLP---PQPPSFV 219
LPL P P P P P P HH+ P +SPP LP P PP V
Sbjct: 510 LPLRLLPR*RANPLPLPLPLHWRPWSRSHHRKLPVPVSPPFLPLFLPLPPMIV 668
>AU251550
Length = 329
Score = 50.1 bits (118), Expect = 4e-07
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +2
Query: 178 PPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFV-VTTIGFCHHRHLPLPLL 236
PPQP PP P PPP +H P PPP PPQPP + G + P P
Sbjct: 35 PPQPGPPGPPGPPPP------GYHNP----PPPGPPQPPGYYNPPPPGPPRDPYAPAP-- 178
Query: 237 PPPPLQHCLHNDYCHRHNHNQLHHPSQSPPP 267
PPPP H H+ H P PPP
Sbjct: 179 PPPPFGH---------HHPPPPHGPPSPPPP 244
Score = 47.8 bits (112), Expect = 2e-06
Identities = 34/103 (33%), Positives = 37/103 (35%), Gaps = 8/103 (7%)
Frame = +2
Query: 173 PLSPSPPQPL----PPPPQPTPPPLLP----PLYRHHQPQPLSPPPLPPQPPSFVVTTIG 224
P P PPQP PPPP P P P P + HH P P PP PP P F
Sbjct: 92 PPPPGPPQPPGYYNPPPPGPPRDPYAPAPPPPPFGHHHPPPPHGPPSPPPPAMF------ 253
Query: 225 FCHHRHLPLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQSPPP 267
++ P P P PP H P PPP
Sbjct: 254 ---YQPPPPPGPPGPP---------------QPPHPPGPGPPP 328
Score = 45.4 bits (106), Expect = 1e-05
Identities = 32/78 (41%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Frame = +2
Query: 173 PLSPSPPQPLPPPP-----QPTPPPLLPPLYRHHQPQPLSPP-----PLPPQPPSFVVTT 222
P P PP P PPP P P P PP Y + P P PP P PP PP
Sbjct: 35 PPQPGPPGPPGPPPPGYHNPPPPGPPQPPGY--YNPPPPGPPRDPYAPAPPPPP------ 190
Query: 223 IGFCHHRHLPLPLLPPPP 240
F HH H P P PP P
Sbjct: 191 --FGHH-HPPPPHGPPSP 235
Score = 26.6 bits (57), Expect = 5.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 171 ALPLSPSPPQPLPPPPQPTPPP 192
A+ P PP P PPQP PP
Sbjct: 245 AMFYQPPPPPGPPGPPQPPHPP 310
>TC14982 similar to UP|Q9FPI2 (Q9FPI2) At1g17620, partial (32%)
Length = 1036
Score = 50.1 bits (118), Expect = 4e-07
Identities = 38/99 (38%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Frame = +1
Query: 179 PQPLPP--PPQPTPPPLLPPLY---RHHQPQPLSP---------PPLPPQPPSFVVTTIG 224
P LPP PP P PPPLL L H P P PPLPP PP +
Sbjct: 136 PPCLPPSTPPPPHPPPLLLHLLLLANPHHPHPPPHHRRCWRRLLPPLPPPPPHLL----- 300
Query: 225 FCHHRHLPLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQ 263
RHLP LLP P H L N H + H P Q
Sbjct: 301 ----RHLPQTLLPQP---HLLLNPLLQIRPHRRRHKPQQ 396
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Frame = +3
Query: 160 PQNSTTTTATIALPLSPSPPQPLP----PPPQPTP-------PPLLPPLYRHHQPQPLSP 208
P S+T T P SPSPP P PPPQP+P PP P H P P
Sbjct: 261 PSTSSTAPTT---PPSPSPPSNSPTSTSPPPQPSPPNSTSPSPPQTPTRKTSHSPTYPLP 431
Query: 209 PPLPP 213
P P
Sbjct: 432 SPYSP 446
Score = 36.2 bits (82), Expect = 0.007
Identities = 28/102 (27%), Positives = 39/102 (37%), Gaps = 6/102 (5%)
Frame = +3
Query: 139 PLFILGTLSASMDFPRGSDKFPQ------NSTTTTATIALPLSPSPPQPLPPPPQPTPPP 192
P +L L+ S P + P +S++++++ A+ SPS P P PP
Sbjct: 132 PTALLTALNPSTAAPAAAASAPSASG*SSSSSSSSSSSAVLASPSTSSTAPTTPPSPSPP 311
Query: 193 LLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLP 234
P PQP P P PP T H PLP
Sbjct: 312 SNSPTSTSPPPQPSPPNSTSPSPPQ--TPTRKTSHSPTYPLP 431
Score = 32.7 bits (73), Expect = 0.072
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 164 TTTTATIALPLSPSPPQPLPPPPQPTPPPLLP 195
TT LP P PPQ PPPP PP P
Sbjct: 24 TT*QTGSTLPPKPPPPQTAPPPPTQLSPPQRP 119
Score = 28.9 bits (63), Expect = 1.0
Identities = 13/31 (41%), Positives = 15/31 (47%)
Frame = +3
Query: 175 SPSPPQPLPPPPQPTPPPLLPPLYRHHQPQP 205
S PP+P PP P PP L P R + P
Sbjct: 42 STLPPKPPPPQTAPPPPTQLSPPQRPNSTAP 134
>AV407983
Length = 417
Score = 48.9 bits (115), Expect = 1e-06
Identities = 40/117 (34%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Frame = +2
Query: 156 SDKFPQNSTTTTA--TIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPP 213
S+ + + STT TA T+ P LPP P P HH P+P +PPP P
Sbjct: 35 SECYGRRSTTQTADATVTPPHRELRRAHLPPHPYP-----------HHTPRPKTPPPPPR 181
Query: 214 QPPSFVVT----TIGFCHHR-HLPLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQSP 265
P F + T+ H LP P LPPPP H L H H Q+ SP
Sbjct: 182 TPRRFPLLLPRHTLPLLRHPFFLPSP-LPPPPPSHPLLPPRPHPHRPRQIPRSQISP 349
Score = 26.6 bits (57), Expect = 5.2
Identities = 22/74 (29%), Positives = 30/74 (39%)
Frame = +1
Query: 124 PDDRREEFSAVDEPFPLFILGTLSASMDFPRGSDKFPQNSTTTTATIALPLSPSPPQPLP 183
P+ RR +SA + SAS P S P S +++ + SP P
Sbjct: 64 PNRRRHRYSATSR-------ASTSAS---PSTSIPSPHPSPQNSSSAS*NTSPISASSSP 213
Query: 184 PPPQPTPPPLLPPL 197
+ PPLLPPL
Sbjct: 214 SHSPSSSPPLLPPL 255
>AV426815
Length = 391
Score = 48.5 bits (114), Expect = 1e-06
Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = -2
Query: 147 SASMDFPRGSDKFPQNSTTTTATIALPLSPSPPQPLP-------PPPQPTPPPLLPPLYR 199
S+S++ P K S + T++ + P +P PPQP P PPP P PP L PP
Sbjct: 270 SSSLEPPHSLCKPLLLS*SHTSSYSSP-APPPPQPTPF*SSHSHPPPPPHPPSLSPPAAA 94
Query: 200 HHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLPLLPPPPLQHC 244
+ PQ S P PP PPS + PLQHC
Sbjct: 93 SYPPQK-STPAKPPLPPSISCSLFS---------------PLQHC 7
>TC19964 similar to UP|Q40363 (Q40363) NuM1 protein, partial (11%)
Length = 562
Score = 48.5 bits (114), Expect = 1e-06
Identities = 35/90 (38%), Positives = 42/90 (45%), Gaps = 5/90 (5%)
Frame = -2
Query: 156 SDKFPQNSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQP-QPLSPP-PL-- 211
+ + P +S+ + L P PLPPPP P PP PP R P +PL PP PL
Sbjct: 363 ASQHP*SSSAKVVFLPAALKGVPRPPLPPPPLPPRPPRSPP--RPPLPNRPLPPPRPLSN 190
Query: 212 -PPQPPSFVVTTIGFCHHRHLPLPLLPPPP 240
PP+PP LP PLLPP P
Sbjct: 189 RPPRPPPL------------LPPPLLPPEP 136
>AV410227
Length = 428
Score = 48.5 bits (114), Expect = 1e-06
Identities = 25/60 (41%), Positives = 30/60 (49%), Gaps = 4/60 (6%)
Frame = +1
Query: 162 NSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPP----LPPQPPS 217
+S+ T+ T L SP+ P P PPP P P PP P P +PPP PP PPS
Sbjct: 169 SSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMTPPAPSTPPPSSA*SPPPPPS 348
Score = 45.1 bits (105), Expect = 1e-05
Identities = 23/64 (35%), Positives = 27/64 (41%)
Frame = +1
Query: 153 PRGSDKFPQNSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLP 212
P S+ P +TA+ + SP P P PTPPP PP P P PP P
Sbjct: 121 PPSSNASPPRPPPSTASSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMTPPAP 300
Query: 213 PQPP 216
PP
Sbjct: 301 STPP 312
Score = 37.7 bits (86), Expect = 0.002
Identities = 24/63 (38%), Positives = 29/63 (45%), Gaps = 4/63 (6%)
Frame = +1
Query: 160 PQNSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPLYRHHQP--QPLSPPPL--PPQP 215
P +S + A+ P S +PP P PPP P PP P +PLS PP P P
Sbjct: 235 PPSSPPSPASSPPPPSMTPPAPSTPPPSSA*SPPPPPS*AGSPPAVEPLSAPPCANSPSP 414
Query: 216 PSF 218
P F
Sbjct: 415 PRF 423
Score = 30.4 bits (67), Expect = 0.36
Identities = 32/84 (38%), Positives = 35/84 (41%), Gaps = 15/84 (17%)
Frame = +2
Query: 173 PLSPS----PPQPL---------PPPPQPTPP--PLLPPLYRHHQPQPLSPPPLPPQPPS 217
PL P P QPL PP + P PLLP L H + QPL PP PP PP
Sbjct: 170 PLRPRHPRHPSQPLRRLRHRLLHPPRHRHRLPLLPLLP*L--HRRRQPLLPP--PPNPPL 337
Query: 218 FVVTTIGFCHHRHLPLPLLPPPPL 241
+ H L P P PPL
Sbjct: 338 LLP------HRLVLRPP*NPSPPL 391
Score = 26.2 bits (56), Expect = 6.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPS 217
P S + P PPP + P P +P P P PPS
Sbjct: 121 PPSSNASPPRPPPSTASSSATSPTSPLSTSPTTPTPTPPPSSPPS 255
>BI418438
Length = 431
Score = 48.5 bits (114), Expect = 1e-06
Identities = 33/92 (35%), Positives = 39/92 (41%), Gaps = 12/92 (13%)
Frame = +1
Query: 138 FPLFILGTLSASMDFPRGSDKFPQNSTTTTATIALPLSPSPPQPLPPPPQPTPPPLLPPL 197
+P F LS+ F S P T TT T +P P PP P PPP Q + P PP
Sbjct: 136 YPPFSPCPLSSPSLFSSSSSPSPPPPTATTTTTTIP--PPPPSPTPPPRQKSSKPARPPA 309
Query: 198 YRHHQ---------PQPLSP---PPLPPQPPS 217
+ QPLS PP PP PP+
Sbjct: 310 SPSNANPPSPTSLLTQPLSSSSNPPSPPPPPT 405
Score = 44.7 bits (104), Expect = 2e-05
Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Frame = +2
Query: 176 PSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHH------R 229
PSPP PL PP P P LP + QP P P PLPP+ H R
Sbjct: 158 PSPP-PLFSPPHPHPLLRLP---QPQQPPPPFPHPLPPRRHRRARNPASLQGHPLPPAMR 325
Query: 230 HLPLP------LLPPPPLQHCLHNDYCHRHNHNQLH 259
LPLP L P PP++H H H+ H +H
Sbjct: 326 ILPLPPPS*PNLSPAPPIRHLRH---LHQPRHRPIH 424
Score = 38.1 bits (87), Expect = 0.002
Identities = 30/105 (28%), Positives = 39/105 (36%), Gaps = 17/105 (16%)
Frame = +1
Query: 153 PRGSDKFPQNSTTTTATIALPLSPSPPQP------------LPPPPQPTPPPLLPPLYRH 200
P ++P S ++ +L S S P P PPPP PTPPP R
Sbjct: 118 PPSPSQYPPFSPCPLSSPSLFSSSSSPSPPPPTATTTTTTIPPPPPSPTPPP------RQ 279
Query: 201 HQPQPLSPPPL-----PPQPPSFVVTTIGFCHHRHLPLPLLPPPP 240
+P PP PP P S + + + P PPPP
Sbjct: 280 KSSKPARPPASPSNANPPSPTSLLTQPLSSSSN-----PPSPPPP 399
Score = 33.9 bits (76), Expect = 0.032
Identities = 14/31 (45%), Positives = 18/31 (57%)
Frame = +1
Query: 162 NSTTTTATIALPLSPSPPQPLPPPPQPTPPP 192
N + T+ + PLS S P PPPP +PPP
Sbjct: 325 NPPSPTSLLTQPLSSSSNPPSPPPPPTSPPP 417
Score = 33.1 bits (74), Expect = 0.055
Identities = 19/53 (35%), Positives = 22/53 (40%), Gaps = 8/53 (15%)
Frame = +1
Query: 173 PLSPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPP--------LPPQPPS 217
PL+P PP P +P PL P P PPP +PP PPS
Sbjct: 100 PLNPPPPPSPSQYPPFSPCPLSSPSLFSSSSSPSPPPPTATTTTTTIPPPPPS 258
Score = 27.7 bits (60), Expect = 2.3
Identities = 20/59 (33%), Positives = 28/59 (46%), Gaps = 1/59 (1%)
Frame = +2
Query: 211 LPPQPPSFVVTTIGFCHHRHLPLPL-LPPPPLQHCLHNDYCHRHNHNQLHHPSQSPPPL 268
+P QP S+ + HH +L + L P H H+ + HN + HH SPPPL
Sbjct: 17 IPIQPHSYCIN-----HHLNLNQTMNLQPFESTH*THHHHLLPHNIHLSHH-VPSPPPL 175
Score = 26.6 bits (57), Expect = 5.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +2
Query: 223 IGFCHHRHLPLPLLPPPPLQHCLHNDYCHRHNHNQLHHPSQSPPP 267
I HH P PL PP H H +L P Q PPP
Sbjct: 137 IHLSHHVPSPPPLFSPP-----------HPHPLLRLPQPQQPPPP 238
>BP043764
Length = 479
Score = 47.8 bits (112), Expect = 2e-06
Identities = 47/143 (32%), Positives = 55/143 (37%), Gaps = 16/143 (11%)
Frame = +3
Query: 113 WYGGVSHRFIIPDDRREEFSAVDEP-FPLFILGTLSASMDFPRGSDKFPQNSTTTTATIA 171
W G S F+IP + + P PLF+ T + S S K P +S + A
Sbjct: 12 WNNG-SFLFLIP-----HLTLIHSPQTPLFLRHTTTVS-----SSLKPPPDSNNSAAPFR 158
Query: 172 LPLS-----PSPPQPLPPP---PQPTPPPLLPPLYRHHQ-------PQPLSPPPLPPQPP 216
PL PS P+P P P P PT PL P H LSPPP PP PP
Sbjct: 159 RPLKTTTTPPSNPKPTPKPKPKPAPTSNPLKNPFKSSHALTNKLWLTSKLSPPPPPPPPP 338
Query: 217 SFVVTTIGFCHHRHLPLPLLPPP 239
P P LPPP
Sbjct: 339 ---------------PPPPLPPP 362
Score = 41.6 bits (96), Expect = 2e-04
Identities = 32/104 (30%), Positives = 43/104 (40%), Gaps = 6/104 (5%)
Frame = +1
Query: 175 SPSPPQPLPPPPQPTPPPLLPPLYRHHQPQPLSPPPLPPQPPSFVVTTIGFCHHRHLPLP 234
+P+ P PLP PPPLLPP+ HQ +PP L Q S + + P
Sbjct: 130 TPTTP-PLPSAAPSKPPPLLPPILNPHQNLNPNPPQL--QTLSKIPSN-----------P 267
Query: 235 LLPPPPLQHCLHND------YCHRHNHNQLHHPSQSPPPLVTAI 272
L+P P L N + HRH+H H + P A+
Sbjct: 268 LMPSPTSSGSLVNSLLLLLHHHHRHHHRYHHRNEKLKSPKTRAL 399
Score = 26.9 bits (58), Expect = 4.0
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +3
Query: 173 PLSPSPPQPLPPPPQPT 189
P P PP PLPPP + T
Sbjct: 324 PPPPPPPPPLPPPERET 374
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.316 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,775,121
Number of Sequences: 28460
Number of extensions: 297641
Number of successful extensions: 17849
Number of sequences better than 10.0: 1557
Number of HSP's better than 10.0 without gapping: 5311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10473
length of query: 284
length of database: 4,897,600
effective HSP length: 89
effective length of query: 195
effective length of database: 2,364,660
effective search space: 461108700
effective search space used: 461108700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Lotus: description of TM0121a.2