BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0061.10
(276 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC11700 homologue to GB|AAL06971.1|15810091|AY056083 AT4g30260/F... 361 e-101
TC16685 homologue to UP|O64614 (O64614) At2g18840 protein (Expre... 169 5e-43
AV767772 67 4e-12
TC8096 weakly similar to GB|AAF89661.1|9622185|AF168782 acinusL ... 48 2e-06
TC8106 weakly similar to UP|Q9XIV1 (Q9XIV1) mRNA expressed in cu... 46 6e-06
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 45 2e-05
TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%) 44 2e-05
BI420016 44 4e-05
BI418438 44 4e-05
AV409412 44 4e-05
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 44 4e-05
AV410591 44 4e-05
AV775527 43 5e-05
TC19701 similar to UP|AAR04332 (AAR04332) Eukaryotic translation... 43 5e-05
TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pro... 43 5e-05
TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomeras... 43 5e-05
AV425247 43 7e-05
TC15784 similar to UP|PE31_ARATH (Q9LHA7) Peroxidase 31 precurso... 43 7e-05
AV406930 42 1e-04
BP033767 42 1e-04
>TC11700 homologue to GB|AAL06971.1|15810091|AY056083 AT4g30260/F9N11_110
{Arabidopsis thaliana;}, partial (45%)
Length = 561
Score = 361 bits (926), Expect = e-101
Identities = 176/176 (100%), Positives = 176/176 (100%)
Frame = +2
Query: 1 MSHGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAP 60
MSHGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAP
Sbjct: 32 MSHGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAP 211
Query: 61 LPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSN 120
LPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSN
Sbjct: 212 LPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSN 391
Query: 121 LKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFALL 176
LKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFALL
Sbjct: 392 LKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFALL 559
>TC16685 homologue to UP|O64614 (O64614) At2g18840 protein (Expressed
protein), partial (30%)
Length = 465
Score = 169 bits (428), Expect = 5e-43
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +1
Query: 192 GHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVCVTLAWSSWAAYPFMSSAVNP 251
GHIIFFQSLSLLGYCLFPLDVGA ICMLKD+VILKVVVVCVTLAWSSWAAYPFMSSAVNP
Sbjct: 1 GHIIFFQSLSLLGYCLFPLDVGAFICMLKDHVILKVVVVCVTLAWSSWAAYPFMSSAVNP 180
Query: 252 RRKALALYPVFLMYVSVGFLIIAID 276
RRKALALYPVFLMYVSVGFLIIAID
Sbjct: 181 RRKALALYPVFLMYVSVGFLIIAID 255
>AV767772
Length = 460
Score = 66.6 bits (161), Expect = 4e-12
Identities = 37/59 (62%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +2
Query: 40 PRASIPVTTSSPFINSNLPAPLPPKSSIS-QPQLPKPISLPPAPPPSTRPEISSSGFGP 97
P +SIPVTT INSN+ AP PPK + Q KPI P APP STRPEISSSGFGP
Sbjct: 284 PWSSIPVTTFFSLINSNILAPFPPKILLLIQTPSSKPIFFPFAPPYSTRPEISSSGFGP 460
>TC8096 weakly similar to GB|AAF89661.1|9622185|AF168782 acinusL protein
{Mus musculus;} , partial (3%)
Length = 1044
Score = 47.8 bits (112), Expect = 2e-06
Identities = 30/76 (39%), Positives = 42/76 (54%), Gaps = 1/76 (1%)
Frame = +1
Query: 32 LPARPPSPPR-ASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEI 90
L A PP PP+ AS+ V T +P +S+ P P P + + Q P P++LPP PP S P +
Sbjct: 19 LEAPPPPPPQAASVSVPTVAPAPSSSQPEPSPRQ---QREQHPIPVALPPPPPLSRAPPV 189
Query: 91 SSSGFGPAPNTLTEPV 106
+ P+P L E V
Sbjct: 190 ARERL-PSPPPLPEKV 234
>TC8106 weakly similar to UP|Q9XIV1 (Q9XIV1) mRNA expressed in cucumber
hypocotyls (Arabinogalactan protein), partial (32%)
Length = 760
Score = 46.2 bits (108), Expect = 6e-06
Identities = 32/75 (42%), Positives = 43/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
A+PA V A P S P A++PV SSP PAP+P ++ P P P+S PPAP P+
Sbjct: 64 AAPAPVAKA-PASTPPAAVPV--SSP-----PPAPVP----VASPPAPVPVSSPPAPAPT 207
Query: 86 T-RPEISSSGFGPAP 99
T P ++ + PAP
Sbjct: 208 TPAPAVTPTAEVPAP 252
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Frame = +1
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQ-----LPKPISLPP 80
ASP +P P P + P +P PAP K + + + P P+ PP
Sbjct: 154 ASPPAPVPVSSPPAPAPTTPAPAVTPTAEVPAPAPSKSKKKVKKGKKHGAPAPSPLLGPP 333
Query: 81 APPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKL 123
APP + GP E +T+ R L +V +L L
Sbjct: 334 APPVGAPGPDDALSPGPTAVAADESGAETI-RYLKMVVGSLAL 459
Score = 29.6 bits (65), Expect = 0.58
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPP-APPPSTRPEIS--- 91
P S P AS P ++ PAP+ K+ S P P+S PP AP P P
Sbjct: 22 PVSAPLASPPSKAAAA------PAPVA-KAPASTPPAAVPVSSPPPAPVPVASPPAPVPV 180
Query: 92 SSGFGPAPNTLTEPVWDTVK 111
SS PAP T V T +
Sbjct: 181 SSPPAPAPTTPAPAVTPTAE 240
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 44.7 bits (104), Expect = 2e-05
Identities = 32/85 (37%), Positives = 36/85 (41%), Gaps = 6/85 (7%)
Frame = +2
Query: 27 SPATVLPARPPSPPRASIPVTTSS---PFINSNLPAPLPPKSSISQPQL--PKPI-SLPP 80
SPA P P P S P S P +S PA PP + S P + P P+ S PP
Sbjct: 212 SPAPPTPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPP 391
Query: 81 APPPSTRPEISSSGFGPAPNTLTEP 105
P ST P S F P P T P
Sbjct: 392 PAPASTPPPASPPPFSPPPATPPPP 466
Score = 44.3 bits (103), Expect = 2e-05
Identities = 38/111 (34%), Positives = 49/111 (43%), Gaps = 5/111 (4%)
Frame = +2
Query: 6 TIPLHPSSQSDIDEIENLIYASPATVLPARPPS---PPRASIPVTTSSPFINSNLPAPLP 62
T P P++QS ++ SP V + PP+ PP S P SSP + P P P
Sbjct: 233 TTPQPPAAQSSPPPAQS----SPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAP 400
Query: 63 PKSSISQPQLPKPISLPPA--PPPSTRPEISSSGFGPAPNTLTEPVWDTVK 111
+S P P P S PPA PPP+ P + + P P T P VK
Sbjct: 401 --ASTPPPASPPPFSPPPATPPPPAATPPPALT---PVPATSPAPAPAKVK 538
Score = 35.8 bits (81), Expect = 0.008
Identities = 28/81 (34%), Positives = 36/81 (43%)
Frame = +2
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
+SP V PP+P AS P S P S PA PP ++ P L + PAP P+
Sbjct: 359 SSPPPVQSTPPPAP--ASTPPPASPPPF-SPPPATPPPPAATPPPALTPVPATSPAPAPA 529
Query: 86 TRPEISSSGFGPAPNTLTEPV 106
++ S PAP PV
Sbjct: 530 ---KVKSKSPAPAPAPALAPV 583
Score = 31.2 bits (69), Expect = 0.20
Identities = 25/79 (31%), Positives = 36/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTR 87
P + PA PP PP A+ P + + + PAP P K P PAP P+
Sbjct: 431 PFSPPPATPP-PPAATPPPALTP--VPATSPAPAPAKVKSKSP--------APAPAPALA 577
Query: 88 PEIS---SSGFGPAPNTLT 103
P +S S GP+ ++L+
Sbjct: 578 PVVSLSPSEAPGPSLSSLS 634
Score = 30.4 bits (67), Expect = 0.34
Identities = 27/77 (35%), Positives = 32/77 (41%)
Frame = +2
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISS 92
P P+PP P T P S+ P P +SS P P+ P PP ST P S
Sbjct: 203 PTTSPAPPT---PTTPQPPAAQSSPP---PAQSS------PPPVQSSP-PPASTPPPAQS 343
Query: 93 SGFGPAPNTLTEPVWDT 109
S P P + PV T
Sbjct: 344 S---PPPVSSPPPVQST 385
>TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%)
Length = 1751
Score = 44.3 bits (103), Expect = 2e-05
Identities = 26/60 (43%), Positives = 29/60 (48%)
Frame = +3
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPST 86
SP P PPSPP S T SP P P PP ++ S P P P + P PPPST
Sbjct: 99 SPLQPPPPLPPSPPSLSSAATVPSP------PYPSPPAATSSPPPAPSPPA--PPPPPST 254
Score = 35.0 bits (79), Expect = 0.014
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSI---SQPQLPK 74
P+ A PSPP S P TSSP + PAP PP S+I + P +P+
Sbjct: 138 PSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGPTVPR 287
Score = 31.6 bits (70), Expect = 0.15
Identities = 32/105 (30%), Positives = 41/105 (38%), Gaps = 1/105 (0%)
Frame = +3
Query: 9 LHPSSQSDIDEIENLIYASPATVLPAR-PPSPPRASIPVTTSSPFINSNLPAPLPPKSSI 67
LH SS + + E P T LP+ PSP + P+ S P ++S P PP S
Sbjct: 27 LHRSSLASFPKPE------P*T*LPSSLAPSPLQPPPPLPPSPPSLSSAATVPSPPYPS- 185
Query: 68 SQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKR 112
PPA S P S P P+T+ TV R
Sbjct: 186 -----------PPAATSSPPPAPSPPAPPPPPSTILTLTGPTVPR 287
Score = 29.6 bits (65), Expect = 0.58
Identities = 20/69 (28%), Positives = 29/69 (41%), Gaps = 10/69 (14%)
Frame = +2
Query: 39 PPRASIPVTTSSPFINSNLPAP------LPPKSSISQPQLPKPISLPPAPPPST----RP 88
PP A P + F +N P PP ++ P P+P ++ P PPPS P
Sbjct: 767 PPNAGGPPSNQGGFPPNNAGGPPSNQGGFPPNNAGGYPASPRPGNM-PGPPPSNPGGYPP 943
Query: 89 EISSSGFGP 97
+ G+ P
Sbjct: 944 NNQAGGYHP 970
>BI420016
Length = 559
Score = 43.5 bits (101), Expect = 4e-05
Identities = 29/72 (40%), Positives = 34/72 (46%)
Frame = +2
Query: 32 LPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEIS 91
+PA PSPP S P T P S P P P S S P P P S PP+P P+ P +
Sbjct: 224 VPASTPSPP--SSPTLTPPPSPPS--PTPNAPLSPSSPPSPPTPPSPPPSPAPNPTPSAT 391
Query: 92 SSGFGPAPNTLT 103
S +P T T
Sbjct: 392 GSTTPSSPLTPT 427
Score = 33.5 bits (75), Expect = 0.040
Identities = 21/73 (28%), Positives = 29/73 (38%)
Frame = +2
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISS 92
P PP P P T + + P+P P +S P ++ PP+PP T S
Sbjct: 143 P*APPEPQTLKKPTTQCT---HGGNPSPKPVPASTPSPPSSPTLTPPPSPPSPTPNAPLS 313
Query: 93 SGFGPAPNTLTEP 105
P+P T P
Sbjct: 314 PSSPPSPPTPPSP 352
Score = 32.7 bits (73), Expect = 0.069
Identities = 15/44 (34%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
Frame = +3
Query: 44 IPVTTSSPFINSNLPA---PLPPKSSISQPQLPKPISLPPAPPP 84
+P+ P +LP P PP+ + P +P+ LPP PPP
Sbjct: 366 LPIRPPLPLALRHLPLL*PPPPPRCPLLPPSSLRPLPLPPPPPP 497
Score = 32.3 bits (72), Expect = 0.090
Identities = 22/56 (39%), Positives = 28/56 (49%), Gaps = 2/56 (3%)
Frame = +2
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKS-SISQP-QLPKPISLPPAPPPST 86
P PPSPP + P T S ++ +PL P S S+S P L P S PA +T
Sbjct: 332 PPTPPSPPPSPAPNPTPSATGSTTPSSPLTPTSASLSSPSSLFSPASTSPASTTAT 499
Score = 30.8 bits (68), Expect = 0.26
Identities = 18/65 (27%), Positives = 32/65 (48%)
Frame = +3
Query: 20 IENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLP 79
I+ L++ P++ P + + SPF + LP PP+ S+ +P LP+ + P
Sbjct: 129 IKLLLHERRRNPKPSKNRRPNALMVGIRLQSPFPHP-LPRHHPPQLSLLRPLLPRRLRTP 305
Query: 80 PAPPP 84
+ PP
Sbjct: 306 RSLPP 320
>BI418438
Length = 431
Score = 43.5 bits (101), Expect = 4e-05
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Frame = +1
Query: 33 PARPPSP----PRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPP----- 83
P PPSP P + P+++ S F +S+ P+P PP ++ + +P P P PP
Sbjct: 109 PPPPPSPSQYPPFSPCPLSSPSLFSSSSSPSPPPPTATTTTTTIPPPPPSPTPPPRQKSS 288
Query: 84 -PSTRPEISSSGFGPAPNT-LTEPV 106
P+ P S+ P+P + LT+P+
Sbjct: 289 KPARPPASPSNANPPSPTSLLTQPL 363
Score = 35.0 bits (79), Expect = 0.014
Identities = 27/94 (28%), Positives = 37/94 (38%), Gaps = 2/94 (2%)
Frame = +1
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPP--RASIPVTTSSPFINSNLPAPLPPKS 65
P P S S +SP+ + PSPP A+ TT P S P P S
Sbjct: 109 PPPPPSPSQYPPFSPCPLSSPSLFSSSSSPSPPPPTATTTTTTIPPPPPSPTPPPRQKSS 288
Query: 66 SISQPQLPKPISLPPAPPPSTRPEISSSGFGPAP 99
++P + PP+P +SSS P+P
Sbjct: 289 KPARPPASPSNANPPSPTSLLTQPLSSSSNPPSP 390
Score = 33.1 bits (74), Expect = 0.053
Identities = 23/64 (35%), Positives = 29/64 (44%), Gaps = 9/64 (14%)
Frame = +1
Query: 30 TVLPARPPSPP-----RASIPVTTSSPFINSNLPAPLP----PKSSISQPQLPKPISLPP 80
T +P PPSP ++S P + N+N P+P P SS S P P P PP
Sbjct: 232 TTIPPPPPSPTPPPRQKSSKPARPPASPSNANPPSPTSLLTQPLSSSSNPPSPPP---PP 402
Query: 81 APPP 84
PP
Sbjct: 403 TSPP 414
Score = 28.9 bits (63), Expect = 1.00
Identities = 26/88 (29%), Positives = 33/88 (36%), Gaps = 14/88 (15%)
Frame = +1
Query: 32 LPARPPSP------PRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLP------ 79
LP P+P P S S F L P PP S P P P+S P
Sbjct: 10 LPNSNPTPLILYKSPSQSQSNHEPSTF*KYPLNPPPPPSPSQYPPFSPCPLSSPSLFSSS 189
Query: 80 --PAPPPSTRPEISSSGFGPAPNTLTEP 105
P+PPP T +++ P P+ P
Sbjct: 190 SSPSPPPPTATTTTTTIPPPPPSPTPPP 273
Score = 26.2 bits (56), Expect = 6.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSS 66
PA+ A PPSP +SS SN P+P PP +S
Sbjct: 304 PASPSNANPPSPTSLLTQPLSSS----SNPPSPPPPPTS 408
>AV409412
Length = 426
Score = 43.5 bits (101), Expect = 4e-05
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +1
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISS 92
P+ PPS + + + SP ++ P+P P SS + P P P S P +PPP P SS
Sbjct: 223 PSLPPSRNPSLLHHLSPSPSLSLPSPSPSPSTSSATSPPTPPPSSPPSSPPPPPPPSTSS 402
Query: 93 SGFGPAPNTLTEP 105
P+T P
Sbjct: 403 -----PPSTTPSP 426
Score = 30.8 bits (68), Expect = 0.26
Identities = 30/94 (31%), Positives = 39/94 (40%)
Frame = +1
Query: 6 TIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKS 65
TIP PS + L + SP+ L PSP ++ T+ P PP S
Sbjct: 208 TIPSSPSLPPSRNP-SLLHHLSPSPSLSLPSPSPSPSTSSATS----------PPTPPPS 354
Query: 66 SISQPQLPKPISLPPAPPPSTRPEISSSGFGPAP 99
S P S PP PPPST S++ P+P
Sbjct: 355 S-------PPSSPPPPPPPSTSSPPSTT---PSP 426
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 43.5 bits (101), Expect = 4e-05
Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 16/84 (19%)
Frame = +1
Query: 26 ASPATVLPA---RPPSPP---------RASIPVTTSSPFINSNLPAPLPPKSSISQPQLP 73
ASPA PA PP+PP ++S+P TT S S+ P P P S IS P P
Sbjct: 403 ASPAATAPAPSKTPPNPPTNSSKPSSCKSSLPNTTPSSL--SSAP-PSPTTSPISTPSSP 573
Query: 74 ----KPISLPPAPPPSTRPEISSS 93
KP S PP+ PP + SSS
Sbjct: 574 ENQEKPASTPPSAPPRSTSSSSSS 645
Score = 32.7 bits (73), Expect = 0.069
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPP- 84
ASP T + +PP + TT ++L AP P + P P PP PP
Sbjct: 283 ASPPTPKSSHSSTPPPSRSSSTTPKSKNATSLTAPSCPPPASPAATAPAPSKTPPNPPTN 462
Query: 85 STRPEISSSGFGPAPNT 101
S++P S PNT
Sbjct: 463 SSKPSSCKSSL---PNT 504
Score = 32.3 bits (72), Expect = 0.090
Identities = 25/82 (30%), Positives = 34/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 3 HGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLP 62
H T+P P +NL++ASP PPSPP + P + S LPA
Sbjct: 440 HHRTLPQTP---------QNLLHASPLFQTQHLPPSPPHHPL-----RPLLRSRLPARRK 577
Query: 63 -PKSSISQPQLPKPISLPPAPP 83
KS + + + LP PP
Sbjct: 578 IRKSQLQHLHQRRHVQLPLPPP 643
Score = 30.4 bits (67), Expect = 0.34
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +1
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKP---ISLPPAPP-----PSTR 87
PPS P S ++SSP + P P S+ P P +SL +PP ST
Sbjct: 601 PPSAPPRSTSSSSSSP-----INTPRKPSSATKAPASSPPGSELSLHHSPPSASRKSSTT 765
Query: 88 PEISSS 93
P+ISSS
Sbjct: 766 PKISSS 783
Score = 30.0 bits (66), Expect = 0.45
Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 23/127 (18%)
Frame = +1
Query: 2 SHGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPV---TTSSPFINSNLP 58
SH T P SS S + +N A+ T PP+ P A+ P T +P NS+ P
Sbjct: 307 SHSSTPPPSRSS-STTPKSKN---ATSLTAPSCPPPASPAATAPAPSKTPPNPPTNSSKP 474
Query: 59 APLPPKSSISQPQLPKPISLPPAP--------------------PPSTRPEISSSGFGPA 98
+ KSS+ S PP+P PPS P +SS
Sbjct: 475 SSC--KSSLPNTTPSSLSSAPPSPTTSPISTPSSPENQEKPASTPPSAPPRSTSSSSSSP 648
Query: 99 PNTLTEP 105
NT +P
Sbjct: 649 INTPRKP 669
Score = 27.7 bits (60), Expect = 2.2
Identities = 23/78 (29%), Positives = 33/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFI-NSNLPAPLPPKSSISQPQLPKPISL--PPAP 82
+SP PPS + S P +S+ P P +SS + P+ SL P P
Sbjct: 217 SSPPESRSTTPPSSEPTCLLAPASPPTPKSSHSSTPPPSRSSSTTPKSKNATSLTAPSCP 396
Query: 83 PPSTRPEISSSGFGPAPN 100
PP+ S + PAP+
Sbjct: 397 PPA-----SPAATAPAPS 435
>AV410591
Length = 429
Score = 43.5 bits (101), Expect = 4e-05
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +2
Query: 27 SPATVLPARPPS--PPRASIP-----VTTSSPFINSNLPAPLPPKSSISQPQLPKPISLP 79
+PA+ P PP+ PP +S+P TTSSP ++LP P P SS S S
Sbjct: 122 TPASAKP*SPPASPPPPSSLPPPPSNSTTSSPSKPASLPTPTPASSSTS-----SSTSAT 286
Query: 80 PAPPPSTRPEISSSGFGPAP 99
PP P +S+S PAP
Sbjct: 287 APPPALLSPPLSASSMPPAP 346
Score = 38.9 bits (89), Expect = 0.001
Identities = 29/77 (37%), Positives = 37/77 (47%)
Frame = +2
Query: 30 TVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPE 89
T A+P SPP +SP S+LP P P S+ S P KP SLP P S+
Sbjct: 122 TPASAKP*SPP--------ASPPPPSSLPPP-PSNSTTSSPS--KPASLPTPTPASSSTS 268
Query: 90 ISSSGFGPAPNTLTEPV 106
S+S P P L+ P+
Sbjct: 269 SSTSATAPPPALLSPPL 319
Score = 35.8 bits (81), Expect = 0.008
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +2
Query: 26 ASPATVLPA------RPPSPPR---ASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPI 76
ASP + PA PP PPR +S+ T S+ F + PA P S + P P P
Sbjct: 5 ASPPSFSPAVTAAENYPPPPPRNHSSSLYPTLSTSF-GAPTPASAKP*SPPASP--PPPS 175
Query: 77 SLPPAPPPSTRPEISSSGFGPAP 99
SLPP P ST S P P
Sbjct: 176SLPPPPSNSTTSSPSKPASLPTP 244
Score = 29.3 bits (64), Expect = 0.76
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = +2
Query: 38 SPPRASIPVTTSSPFINSNLPAPLPPKSSIS-QPQL------PKPISLPPAPPPSTRPEI 90
SPP S VT + N P P P S S P L P P S P PP++ P
Sbjct: 8 SPPSFSPAVTAAE-----NYPPPPPRNHSSSLYPTLSTSFGAPTPASAKP*SPPASPPPP 172
Query: 91 SSSGFGPAPNTLTEP 105
SS P+ +T + P
Sbjct: 173 SSLPPPPSNSTTSSP 217
>AV775527
Length = 466
Score = 43.1 bits (100), Expect = 5e-05
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = +1
Query: 11 PSSQSDIDEIENLIYASPATVLPARPPSPPRA--SIPVTTSSPFINSNLPAPLP-PKSSI 67
PSS S + +S ++ LP+ PP PP + S P +TSSP +P+P P P +
Sbjct: 82 PSSSSSVP-------SSSSSNLPSLPPPPPPSPVSTPTSTSSP-----MPSPSPVPTCAS 225
Query: 68 SQPQLPKP-----ISLPPAPPPSTRPEISSSGFGPAPNT 101
LP P +S P PPP P S F P P T
Sbjct: 226 RATHLPAPASSSAVSHSP*PPPPQSPLSFHSLFPPTPAT 342
Score = 25.8 bits (55), Expect = 8.4
Identities = 17/59 (28%), Positives = 29/59 (48%), Gaps = 1/59 (1%)
Frame = +1
Query: 43 SIPVTTSSPFINS-NLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPN 100
S+ +T +++S + + +P SS + P LP PP PP S+S P+P+
Sbjct: 43 SLGITKIGAWLHSPSSSSSVPSSSSSNLPSLP-----PPPPPSPVSTPTSTSSPMPSPS 204
>TC19701 similar to UP|AAR04332 (AAR04332) Eukaryotic translation initiation
factor 4E (Fragment), partial (67%)
Length = 565
Score = 43.1 bits (100), Expect = 5e-05
Identities = 27/70 (38%), Positives = 31/70 (43%)
Frame = +2
Query: 32 LPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEIS 91
+P PPSP TT SP L P K S P P+ PP PP ST P I
Sbjct: 65 IPQNPPSP-------TTKSPPTLRLLTTPTSRKERSSTMMTPPPLPNPPPPPLSTNPIIP 223
Query: 92 SSGFGPAPNT 101
S GP+ +T
Sbjct: 224 SRILGPSGST 253
>TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
(ATAGP4) (AT5G10430/F12B17_220), partial (42%)
Length = 575
Score = 43.1 bits (100), Expect = 5e-05
Identities = 29/82 (35%), Positives = 37/82 (44%), Gaps = 4/82 (4%)
Frame = +3
Query: 28 PATVLPARPPS-PPRASIPVTTSSPFINSNLPAPLPPKSS--ISQPQLPKP-ISLPPAPP 83
P PA PP+ PP A+ P T++P + P+ PP + S P P S PPAP
Sbjct: 198 PPAAAPAPPPATPPPAATPAPTTTPPAATPAPSASPPAPTPTASPTGAPTPSASSPPAPI 377
Query: 84 PSTRPEISSSGFGPAPNTLTEP 105
PS GP PN+ P
Sbjct: 378 PSGPASGPGPAAGPGPNSADTP 443
Score = 35.0 bits (79), Expect = 0.014
Identities = 23/77 (29%), Positives = 32/77 (40%), Gaps = 3/77 (3%)
Frame = +3
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
A+P PP PP A+ ++P PA P ++ P P + PPAP P+
Sbjct: 159 AAPTQAPTTTPPPPPAAAPAPPPATP-----PPAATPAPTTTPPAATPAPSASPPAPTPT 323
Query: 86 TRP---EISSSGFGPAP 99
P S+ PAP
Sbjct: 324 ASPTGAPTPSASSPPAP 374
Score = 31.6 bits (70), Expect = 0.15
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 29 ATVLP-ARPPSPPRASIPVTTSSPFINSNLPAPLP--PKSSISQPQLPKPISLPPAPPPS 85
AT P A PP+P + P +P +S PAP+P P S P P S PPPS
Sbjct: 279 ATPAPSASPPAPTPTASPTGAPTPSASSP-PAPIPSGPASGPGPAAGPGPNSADTPPPPS 455
Score = 30.0 bits (66), Expect = 0.45
Identities = 28/104 (26%), Positives = 39/104 (36%), Gaps = 21/104 (20%)
Frame = +1
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPP---------SPPRASIPVTTSSPFINSNLP 58
P H Q + ++ L + LP PP PP +P+ P ++ LP
Sbjct: 187 PHHHRQQQHLPHLQQLHHQQ----LPLLPPLLHQLPPLLPPPPLQLPLQPLPPPVHPPLP 354
Query: 59 APL-PPKSSISQPQLPKP-----------ISLPPAPPPSTRPEI 90
PL PP+S +Q Q P LPP ST P +
Sbjct: 355 LPLHPPQSHPAQHQAQAPPLDQAQTALIHHHLPPLHSHSTSPSL 486
Score = 29.6 bits (65), Expect = 0.58
Identities = 16/44 (36%), Positives = 23/44 (51%)
Frame = +3
Query: 58 PAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNT 101
P P ++ + P P P + PAPPP+T P ++ PAP T
Sbjct: 153 PGAAPTQAPTTTP--PPPPAAAPAPPPATPPPAAT----PAPTT 266
Score = 29.6 bits (65), Expect = 0.58
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Frame = +3
Query: 23 LIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPIS--LPP 80
LI AT A+ P P TT P AP PP P P P + P
Sbjct: 111 LILGLLATSCVAQAPGAAPTQAPTTTPPP---PPAAAPAPP------PATPPPAATPAPT 263
Query: 81 APPPSTRPEISSSGFGPAP 99
PP+ P S+S P P
Sbjct: 264 TTPPAATPAPSASPPAPTP 320
>TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (81%)
Length = 1355
Score = 43.1 bits (100), Expect = 5e-05
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = +2
Query: 23 LIYASPATVLPARP-PSPPRASI------PVTTSSP-FINSNLPAPLPPKSSISQPQLPK 74
L YA P P+ P PSP S P TTSSP + +++ PAP PP SS S
Sbjct: 347 LNYAPPPLPNPSVPSPSPKTTSRDSPPTRPSTTSSPAWSSASAPAPPPPSSSPSSASFSP 526
Query: 75 PISLP---PAPPPSTRPEISSSGFGPAPNTLTEP 105
P + P +PPPS R +P++ T P
Sbjct: 527 PANSPTSSASPPPSARRSRRDPSASRSPSSTTIP 628
Score = 30.8 bits (68), Expect = 0.26
Identities = 22/65 (33%), Positives = 26/65 (39%), Gaps = 3/65 (4%)
Frame = +2
Query: 38 SPPRASIPVTTSS---PFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSG 94
SPP ++P T S P + P PLP S S PP P +T SS
Sbjct: 290 SPPHTTMPPPTLSYAPPLPLNYAPPPLPNPSVPSPSPKTTSRDSPPTRPSTTSSPAWSSA 469
Query: 95 FGPAP 99
PAP
Sbjct: 470 SAPAP 484
>AV425247
Length = 417
Score = 42.7 bits (99), Expect = 7e-05
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +2
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGF 95
P SPPR T SPF + LP P SSI P P + P+P P+T P ++
Sbjct: 137 PTSPPR------TLSPFSHHLLPPLSLPPSSIHTISFPFPFPITPSPSPNTPPPLTLCPS 298
Query: 96 GPAPNTLTEP 105
P+P L P
Sbjct: 299 SPSPLALIFP 328
Score = 28.9 bits (63), Expect = 1.00
Identities = 27/81 (33%), Positives = 35/81 (42%), Gaps = 3/81 (3%)
Frame = +2
Query: 7 IPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSS 66
+ L PSS I + + P + P+ P+ P P T P S L PP +S
Sbjct: 191 LSLPPSS------IHTISFPFPFPITPSPSPNTP----PPLTLCPSSPSPLALIFPPTAS 340
Query: 67 ISQPQL--PK-PISLPPAPPP 84
S P L PK P S +PPP
Sbjct: 341 PSHPHLICPKQPTSHLLSPPP 403
Score = 25.8 bits (55), Expect = 8.4
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 39 PPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISL--PPAPPPS 85
PP + ++ PF + P+P P P P P++L PP PS
Sbjct: 200 PPSSIHTISFPFPFPITPSPSPNTPPPLTLCPSSPSPLALIFPPTASPS 346
>TC15784 similar to UP|PE31_ARATH (Q9LHA7) Peroxidase 31 precursor (Atperox
P31) (ATP41) , partial (38%)
Length = 475
Score = 42.7 bits (99), Expect = 7e-05
Identities = 32/79 (40%), Positives = 39/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLP--KPISLPPAPPP 84
SP P PP+PPR++ TT+S A PP SS PQLP KP + P + P
Sbjct: 169 SPTNKSPPPPPAPPRSASSSTTAS-----TPTAATPPSSS---PQLPSTKPNATPTSTSP 324
Query: 85 S-TRPEISSSGFGPAPNTL 102
S P SSS P N+L
Sbjct: 325 SPATPSTSSSELKPPSNSL 381
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/79 (31%), Positives = 34/79 (42%), Gaps = 1/79 (1%)
Frame = +1
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPL-PPKSS 66
P P S S A+P + P P + P A+ T+ SP S + L PP +S
Sbjct: 199 PAPPRSASSSTTASTPTAATPPSSSPQLPSTKPNATPTSTSPSPATPSTSSSELKPPSNS 378
Query: 67 ISQPQLPKPISLPPAPPPS 85
++ P P S PP P S
Sbjct: 379 LAPTPSPAPTSSPPPPATS 435
Score = 32.7 bits (73), Expect = 0.069
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +1
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGF 95
PPS R S +T++ NS PKSS + P P + P PPP+ SSS
Sbjct: 88 PPSHTRDSHSTSTNTRAHNS-------PKSSAT----PSPTNKSPPPPPAPPRSASSSTT 234
Query: 96 GPAPNTLTEP 105
P T P
Sbjct: 235 ASTPTAATPP 264
>AV406930
Length = 433
Score = 42.0 bits (97), Expect = 1e-04
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Frame = +1
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPR----------ASIPVTT-SSPFINS- 55
PLH SS I L A P + P PP PP ++ P+T +P +S
Sbjct: 16 PLH-SSHPPHSSISALALAPPHFLAPPPPPQPPNPPSISQNLSISTHPITPFHTPLSHSF 192
Query: 56 NLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDL 114
NLP P P +S LP P P + P P SSS + + + P++ + KR L
Sbjct: 193 NLPLPKPASIPLSFSALPSPSPSPSSSPTLIPPPPSSSRRRGSCSPMNSPLFVSSKRIL 369
>BP033767
Length = 541
Score = 42.0 bits (97), Expect = 1e-04
Identities = 30/94 (31%), Positives = 37/94 (38%), Gaps = 1/94 (1%)
Frame = +1
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSI 67
P HP + +L + PP PP +P SSP + + LPP S
Sbjct: 169 PFHPLNPQTHHHHHHLPHLQTQNTHFPPPPQPPPPKMPPHLSSPHTHLHHHLLLPPPSPP 348
Query: 68 SQPQLPKPISL-PPAPPPSTRPEISSSGFGPAPN 100
S P P SL PP P P T S PAP+
Sbjct: 349 SPPTSPPSSSLKPPNPNPPTSSSASPLPPSPAPS 450
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +1
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISS 92
P PPSPP TS P + P P PP SS + P P P P + P + ++
Sbjct: 334 PPSPPSPP-------TSPPSSSLKPPNPNPPTSSSASPLPPSPAPSPSSLSPPSSTADAA 492
Query: 93 SGFGPAPNTLTEP 105
+ P L++P
Sbjct: 493 AKTTPPTRRLSDP 531
Score = 26.9 bits (58), Expect = 3.8
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +3
Query: 42 ASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNT 101
A + + +S P IN + + S+ Q P P P P PS P F P T
Sbjct: 96 APLQLLSSEPIINRRILHQPFTQGSLPPSQPPNP----PPPSPSPSPPNPKYPFSSTPTT 263
Query: 102 LT 103
T
Sbjct: 264 TT 269
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,472,441
Number of Sequences: 28460
Number of extensions: 153606
Number of successful extensions: 5492
Number of sequences better than 10.0: 884
Number of HSP's better than 10.0 without gapping: 2790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4172
length of query: 276
length of database: 4,897,600
effective HSP length: 89
effective length of query: 187
effective length of database: 2,364,660
effective search space: 442191420
effective search space used: 442191420
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0061.10