BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.7
(449 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203600 similar to UP|O64455 (O64455) Ca2+/H+ exchanger, partia... 553 e-158
TC203303 homologue to UP|O64455 (O64455) Ca2+/H+ exchanger, part... 333 9e-92
CO978570 241 4e-64
AW471762 similar to GP|16604312|gb At3g51860/ORF11 {Arabidopsis ... 228 3e-60
TC221232 similar to UP|Q70IJ2 (Q70IJ2) Low affinity calcium tran... 175 3e-44
TC220110 similar to UP|Q94IH5 (Q94IH5) Ca2+/H+ antiporter, parti... 151 7e-37
TC232332 similar to UP|Q6R2R4 (Q6R2R4) CAX, partial (19%) 110 1e-24
TC203402 similar to UP|O64455 (O64455) Ca2+/H+ exchanger, partia... 105 5e-23
TC230493 similar to UP|Q70IJ2 (Q70IJ2) Low affinity calcium tran... 99 5e-21
CD405214 homologue to PIR|T07821|T078 Ca2+/H+-exchanging protein... 90 2e-18
CO983267 79 5e-15
TC210324 similar to UP|Q9ZQT4 (Q9ZQT4) H+/Ca2+ exchanger 2, part... 76 3e-14
AW310634 similar to PIR|T07821|T078 Ca2+/H+-exchanging protein -... 69 6e-12
AW704472 similar to PIR|T07821|T078 Ca2+/H+-exchanging protein -... 60 2e-09
BE022406 similar to PIR|T07821|T078 Ca2+/H+-exchanging protein -... 59 3e-09
CD411941 similar to GP|16604312|gb| At3g51860/ORF11 {Arabidopsis... 59 3e-09
TC203695 UP|O64455 (O64455) Ca2+/H+ exchanger, partial (9%) 55 6e-08
BE329980 similar to GP|4512263|dbj| H+/Ca2+ exchanger 2 {Ipomoea... 44 2e-04
BM527067 GP|4512263|dbj H+/Ca2+ exchanger 2 {Ipomoea nil}, parti... 35 0.069
TC235120 similar to UP|Q9ZQT4 (Q9ZQT4) H+/Ca2+ exchanger 2, part... 34 0.15
>TC203600 similar to UP|O64455 (O64455) Ca2+/H+ exchanger, partial (97%)
Length = 2134
Score = 553 bits (1426), Expect = e-158
Identities = 291/432 (67%), Positives = 343/432 (79%)
Frame = +1
Query: 16 LESNTTNEETSHENLSRSMVKRSDSVLVTNNINARFQMLRIFMTNLRVVLLGTKLVVLFP 75
L + ++H S S+ K+S LV+ A LR + NL+ V+LGTKL +L P
Sbjct: 229 LTKENRHGRSAHSMSSTSLRKKSSRTLVSKLPCAT---LRSILLNLQEVILGTKLSILIP 399
Query: 76 AVPLAVAADFYKFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNAT 135
A+P A+ A+ Y FGRPWIF SLLGL PLAERVSF+TEQ+A++TGPTVGGLLNATCGN T
Sbjct: 400 AIPAAIIAECYGFGRPWIFILSLLGLTPLAERVSFITEQVAFYTGPTVGGLLNATCGNVT 579
Query: 136 EMIIAILALRKNKVNVVKFSLLGSVLSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNS 195
E+IIAI AL NK+ VVK+SLLGS+LSNLLLVLG+SLLCGG+AN+ EQ+YDR+QADVNS
Sbjct: 580 ELIIAIFALSSNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANVGVEQKYDRRQADVNS 759
Query: 196 LLLLLGLLCHLLPLLFKYSLAGGDYSIATSTLQLSRASSIVMLLAYVAYIFFQLKTHRRL 255
L+LLLGLLC+LLP+LFKYS A ++ S L LSRASSIVML+AYV YI FQL THR L
Sbjct: 760 LMLLLGLLCYLLPMLFKYSGASAALTVDPS-LHLSRASSIVMLIAYVVYIVFQLWTHREL 936
Query: 256 FDAQEVIIDIEEDDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSF 315
F+ ++ D E+ EE+AVIG WS WLVGMT+ I++LSEYVV TIE ASDSWG+SVSF
Sbjct: 937 FEEEDDGKDGEDGSEEQAVIGLWSGIAWLVGMTVFIAVLSEYVVDTIEDASDSWGLSVSF 1116
Query: 316 ISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIKM 375
+SIILLPIVGNAAEHAG+IIFAFKNKLDISLGVA+GSATQI+MFVVPL VIVAWIMGI M
Sbjct: 1117LSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVIVAWIMGIDM 1296
Query: 376 DLDFNLLETGCLAFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAACFFVNKTAQINQHPR 435
DL+FNLLETG LA AIIVT FTLQDGTSHYMKG+VL LCY+VI ACFFV +T NQ
Sbjct: 1297DLNFNLLETGSLALAIIVTGFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPFNNQADV 1476
Query: 436 TSFGAKPSFEAI 447
T+ KP+ A+
Sbjct: 1477TNITLKPTTNAV 1512
>TC203303 homologue to UP|O64455 (O64455) Ca2+/H+ exchanger, partial (51%)
Length = 1180
Score = 333 bits (854), Expect = 9e-92
Identities = 173/244 (70%), Positives = 201/244 (81%)
Frame = +2
Query: 204 CHLLPLLFKYSLAGGDYSIATSTLQLSRASSIVMLLAYVAYIFFQLKTHRRLFDAQEVII 263
C+LLP+LFKYS A ++ S L LSRASSIVML+AYV YI FQL THR+LF+A++
Sbjct: 2 CYLLPMLFKYSGASAALTVDPS-LHLSRASSIVMLIAYVVYIVFQLWTHRQLFEAEDEGE 178
Query: 264 DIEEDDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPI 323
D E+ +EE+AVIG WS WLVGMT+ I++LSEYVV TIE ASDSWG+SVSF+SIILLPI
Sbjct: 179 DGEDGEEEQAVIGLWSGIAWLVGMTVFIAVLSEYVVDTIEDASDSWGLSVSFLSIILLPI 358
Query: 324 VGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIKMDLDFNLLE 383
VGNAAEHAG+IIFAFKNKLDISLGVA+GSATQI+MFVVPL VIVAWIMGI MD++FNLLE
Sbjct: 359 VGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVIVAWIMGINMDMNFNLLE 538
Query: 384 TGCLAFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAACFFVNKTAQINQHPRTSFGAKPS 443
TG LA AIIVT FTLQDGTSHYMKG+VL LCY+VI ACFFV +T NQ T+ KP+
Sbjct: 539 TGSLALAIIVTGFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPFNNQADVTNITLKPA 718
Query: 444 FEAI 447
A+
Sbjct: 719 TNAV 730
>CO978570
Length = 742
Score = 241 bits (616), Expect = 4e-64
Identities = 128/255 (50%), Positives = 172/255 (67%), Gaps = 9/255 (3%)
Frame = -2
Query: 169 GSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYSLAGGDYSIATSTLQ 228
G + LCGG+ N K+EQ +++ A VNS LLL+ ++ L P + Y+ + + S L
Sbjct: 741 GCAFLCGGIVNHKKEQVFNKAAASVNSGLLLMAVMGILFPAVLHYTHT--EVRVGKSELS 568
Query: 229 LSRASSIVMLLAYVAYIFFQLKTHRRLFDAQEVIIDIEED---------DEEKAVIGFWS 279
LSR SS +ML+AYVAY+FFQLK+ R L+ + + ED D+E I W
Sbjct: 567 LSRLSSCIMLVAYVAYLFFQLKSQRSLY------VSVNEDESQNGNNSNDDESPDISKWE 406
Query: 280 AFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFK 339
WL MT IS+LSEY+VG +E AS +W I V+FIS+ILLP+VGNAAEHA +I+FA K
Sbjct: 405 TLIWLSVMTAWISILSEYLVGAMEGASMAWEIPVAFISVILLPLVGNAAEHASAIMFAMK 226
Query: 340 NKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIKMDLDFNLLETGCLAFAIIVTAFTLQ 399
+KLDISLGVA+GS+TQISMFV+P V++ WI+G MDL+F L ET L +IV AF LQ
Sbjct: 225 DKLDISLGVAIGSSTQISMFVIPFCVVIGWIIGQPMDLNFQLFETAALFLTVIVVAFMLQ 46
Query: 400 DGTSHYMKGVVLTLC 414
+GT++Y KG++L LC
Sbjct: 45 EGTANYFKGLMLILC 1
>AW471762 similar to GP|16604312|gb At3g51860/ORF11 {Arabidopsis thaliana},
partial (27%)
Length = 430
Score = 228 bits (582), Expect = 3e-60
Identities = 120/145 (82%), Positives = 131/145 (89%)
Frame = +3
Query: 128 NATCGNATEMIIAILALRKNKVNVVKFSLLGSVLSNLLLVLGSSLLCGGLANLKREQRYD 187
NATCGNATEMII++LAL +NKVNVVKFSLLGS+ SNLLLVLGSSLLCGGLANL++EQRYD
Sbjct: 3 NATCGNATEMIISLLALHQNKVNVVKFSLLGSIFSNLLLVLGSSLLCGGLANLRKEQRYD 182
Query: 188 RKQADVNSLLLLLGLLCHLLPLLFKYSLAGGDYSIATSTLQLSRASSIVMLLAYVAYIFF 247
RKQADVNSLLLLLGLLCHLLPLL +Y+LAG SIATS LQLSRASSIVMLLAY YIFF
Sbjct: 183 RKQADVNSLLLLLGLLCHLLPLLLRYALAGEYPSIATSNLQLSRASSIVMLLAYAGYIFF 362
Query: 248 QLKTHRRLFDAQEVIIDIEEDDEEK 272
QLKTHR+LFDAQE + E +DEEK
Sbjct: 363 QLKTHRQLFDAQE---EDENEDEEK 428
>TC221232 similar to UP|Q70IJ2 (Q70IJ2) Low affinity calcium transporter CAX2
(Fragment), partial (45%)
Length = 1275
Score = 175 bits (444), Expect = 3e-44
Identities = 103/228 (45%), Positives = 137/228 (59%)
Frame = +2
Query: 133 NATEMIIAILALRKNKVNVVKFSLLGSVLSNLLLVLGSSLLCGGLANLKREQRYDRKQAD 192
NATE+II+I AL+ VV+ LLGS+LSN+LLVLG + LCGG+ N ++EQ +++
Sbjct: 434 NATELIISIYALKSGMTCVVQLXLLGSILSNMLLVLGCAFLCGGIVNHEKEQVFNKAATS 613
Query: 193 VNSLLLLLGLLCHLLPLLFKYSLAGGDYSIATSTLQLSRASSIVMLLAYVAYIFFQLKTH 252
VNS LLL+ ++ L P + Y+ + + S L LSR SS +ML+AYVAY+FFQLK+
Sbjct: 614 VNSRLLLMAVMGILFPAVLHYT--HSEVHVGKSELSLSRFSSCIMLVAYVAYLFFQLKSQ 787
Query: 253 RRLFDAQEVIIDIEEDDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGIS 312
R L+ V E AS +W I
Sbjct: 788 RNLY------------------------------------------VSVNEGASMAWEIP 841
Query: 313 VSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFV 360
V+FIS+ILLP+VGNA EHA +I+FA K+KLDISLGVA+GS+TQISMFV
Sbjct: 842 VAFISVILLPLVGNATEHASAIMFAMKDKLDISLGVAIGSSTQISMFV 985
>TC220110 similar to UP|Q94IH5 (Q94IH5) Ca2+/H+ antiporter, partial (29%)
Length = 533
Score = 151 bits (381), Expect = 7e-37
Identities = 71/115 (61%), Positives = 95/115 (81%)
Frame = +3
Query: 311 ISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWI 370
+SV+FIS+ILLPIVGNAAEHA +I+FA K+KLDI++GVA+GS+TQISMFV+P V+V W
Sbjct: 6 MSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWC 185
Query: 371 MGIKMDLDFNLLETGCLAFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAACFFVN 425
MG +MDL+F L ET L ++V AF +Q+ TS+Y KG++L LCYL++AA FFV+
Sbjct: 186 MGKEMDLNFQLFETATLFITVLVVAFMMQERTSNYFKGLMLILCYLIVAASFFVH 350
>TC232332 similar to UP|Q6R2R4 (Q6R2R4) CAX, partial (19%)
Length = 755
Score = 110 bits (275), Expect = 1e-24
Identities = 52/67 (77%), Positives = 58/67 (85%)
Frame = +2
Query: 361 VPLSVIVAWIMGIKMDLDFNLLETGCLAFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAA 420
VPL VIVAWIMGIKMDL+FNLLET L+ AI +TAF LQDGTSHYMKG+VL LCY+VI A
Sbjct: 233 VPLCVIVAWIMGIKMDLNFNLLETASLSLAITITAFALQDGTSHYMKGLVLILCYIVIGA 412
Query: 421 CFFVNKT 427
CFFV +T
Sbjct: 413 CFFVQRT 433
Score = 37.0 bits (84), Expect = 0.018
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +1
Query: 332 GSIIFAFKNKL-----DISLGVAMGSATQISMFVVPLSVIVAWIMGIKMDLDFNLLETGC 386
G +I + KL DISLGV++GS+TQISMFVV + + + + + D N+ C
Sbjct: 67 GHVI*XXETKLMMLLQDISLGVSLGSSTQISMFVVSIHLKKNVCIHLALMFDINIGSPMC 246
>TC203402 similar to UP|O64455 (O64455) Ca2+/H+ exchanger, partial (27%)
Length = 544
Score = 105 bits (261), Expect = 5e-23
Identities = 54/106 (50%), Positives = 73/106 (67%)
Frame = +2
Query: 16 LESNTTNEETSHENLSRSMVKRSDSVLVTNNINARFQMLRIFMTNLRVVLLGTKLVVLFP 75
L T + ++H S S+ K+S LV+ A LR F++NL+ V+LGTKL +L P
Sbjct: 236 LTKETRHGRSAHRMSSTSLRKKSSRTLVSKVPCAT---LRNFLSNLQEVILGTKLSILIP 406
Query: 76 AVPLAVAADFYKFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGP 121
A+P A+ A+ + FGRPWIF SLLGL PLAERVSF+TEQ+A++TGP
Sbjct: 407 AIPAAIVAECFGFGRPWIFILSLLGLTPLAERVSFITEQVAFYTGP 544
>TC230493 similar to UP|Q70IJ2 (Q70IJ2) Low affinity calcium transporter CAX2
(Fragment), partial (21%)
Length = 855
Score = 98.6 bits (244), Expect = 5e-21
Identities = 49/85 (57%), Positives = 64/85 (74%)
Frame = +3
Query: 111 LTEQIAYFTGPTVGGLLNATCGNATEMIIAILALRKNKVNVVKFSLLGSVLSNLLLVLGS 170
L Q+A++TG TVGGLLNAT GNATE+II+I AL+ VV+ SLLGS+LSN+LLVLG
Sbjct: 3 LYRQLAFYTGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGC 182
Query: 171 SLLCGGLANLKREQRYDRKQADVNS 195
+ LCGG+ N ++EQ ++ VNS
Sbjct: 183 AFLCGGIVNHEKEQVFN*AATSVNS 257
>CD405214 homologue to PIR|T07821|T078 Ca2+/H+-exchanging protein - mung
bean, partial (13%)
Length = 543
Score = 90.1 bits (222), Expect = 2e-18
Identities = 44/59 (74%), Positives = 52/59 (87%)
Frame = +2
Query: 113 EQIAYFTGPTVGGLLNATCGNATEMIIAILALRKNKVNVVKFSLLGSVLSNLLLVLGSS 171
EQ+A++TGPTVGGLLNATCGN TE+IIAILAL NK+ VK+SL GS+LSNLL VLG+S
Sbjct: 365 EQVAFYTGPTVGGLLNATCGNVTELIIAILALSSNKIAGVKYSL*GSILSNLLRVLGTS 541
>CO983267
Length = 723
Score = 78.6 bits (192), Expect = 5e-15
Identities = 48/95 (50%), Positives = 51/95 (53%), Gaps = 38/95 (40%)
Frame = -1
Query: 343 DISLGVAMGSATQISMFVV--------------------------------------PLS 364
DISLGV MGSATQISMFVV PLS
Sbjct: 603 DISLGVTMGSATQISMFVVRLNY*YYYYILI*SCFE*IL*C*LPTNFNDLMTNEF*VPLS 424
Query: 365 VIVAWIMGIKMDLDFNLLETGCLAFAIIVTAFTLQ 399
V VAWIMGI+MD DFNLLET CL+F II+T FTLQ
Sbjct: 423 VFVAWIMGIRMDSDFNLLETRCLSFTIIITMFTLQ 319
Score = 47.8 bits (112), Expect(2) = 6e-09
Identities = 24/41 (58%), Positives = 30/41 (72%)
Frame = -2
Query: 388 AFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAACFFVNKTA 428
+F +V +L DGTS YMKGV TLCY+VI ACFFV K++
Sbjct: 275 SFNRVVCCLSL*DGTSRYMKGV--TLCYIVIGACFFVLKSS 159
Score = 30.4 bits (67), Expect(2) = 6e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 432 QHPRTSFGAKPSFEAI 447
Q P+ SFGAKPSFEAI
Sbjct: 69 QSPKDSFGAKPSFEAI 22
>TC210324 similar to UP|Q9ZQT4 (Q9ZQT4) H+/Ca2+ exchanger 2, partial (18%)
Length = 807
Score = 76.3 bits (186), Expect = 3e-14
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 361 VPLSVIVAWIMGIKMDLDFNLLETGCLAFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAA 420
+P V++ WI G MDL+F L ET L IV AF LQ+GT++Y KG++L LCYL++AA
Sbjct: 509 IPFCVVIGWITGHPMDLNFQLFETAVLFLTXIVVAFMLQEGTANYFKGLMLILCYLIVAA 688
Query: 421 CFFVN 425
F+V+
Sbjct: 689 SFYVH 703
>AW310634 similar to PIR|T07821|T078 Ca2+/H+-exchanging protein - mung bean,
partial (13%)
Length = 220
Score = 68.6 bits (166), Expect = 6e-12
Identities = 36/71 (50%), Positives = 43/71 (59%)
Frame = -1
Query: 377 LDFNLLETGCLAFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAACFFVNKTAQINQHPRT 436
L FN LE L IIVT FT QDG SH + +VL LCY+VI ACFFV +T NQ T
Sbjct: 220 LTFNFLEKVPLVLQIIVTGFTSQDGISHTTRALVLLLCYIVIGACFFVQRTPFNNQADVT 41
Query: 437 SFGAKPSFEAI 447
+ KP+ A+
Sbjct: 40 NITLKPTTNAV 8
>AW704472 similar to PIR|T07821|T078 Ca2+/H+-exchanging protein - mung bean,
partial (8%)
Length = 160
Score = 60.1 bits (144), Expect = 2e-09
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 361 VPLSVIVAWIMGIKMDLDFNLLETGCLAFAIIVTAFTLQ 399
VPL VIVAWI+GIKMD +FN+LETG LA AI +T FTLQ
Sbjct: 44 VPLCVIVAWILGIKMDHNFNILETGSLAVAITITDFTLQ 160
>BE022406 similar to PIR|T07821|T078 Ca2+/H+-exchanging protein - mung bean,
partial (9%)
Length = 157
Score = 59.3 bits (142), Expect = 3e-09
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +2
Query: 387 LAFAIIVTAFTLQDGTSHYMKGVVLTLCYLVIAACFFVNKT 427
LA+AI++T FTLQDGT +Y+KG+ L LCY+ I ACFFV +T
Sbjct: 2 LAWAIVMTGFTLQDGTYYYIKGLDLLLCYIDIGACFFVQRT 124
>CD411941 similar to GP|16604312|gb| At3g51860/ORF11 {Arabidopsis thaliana},
partial (5%)
Length = 440
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
Frame = -2
Query: 399 QDGTSHYMKGVVLTLCYLVIAACFFVNKTAQ--INQH-PRTSFGAKP 442
QDGTSHY+KG+VL LCY++IAACFFV+KT+ INQ R +F A+P
Sbjct: 430 QDGTSHYLKGMVLFLCYIIIAACFFVHKTSTPLINQA*SRVNF*ARP 290
>TC203695 UP|O64455 (O64455) Ca2+/H+ exchanger, partial (9%)
Length = 802
Score = 55.1 bits (131), Expect = 6e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 399 QDGTSHYMKGVVLTLCYLVIAACFFVNKT 427
QDGTSHYMKG+VL LCY+VI ACFFV +T
Sbjct: 4 QDGTSHYMKGLVLLLCYIVIGACFFVQRT 90
>BE329980 similar to GP|4512263|dbj| H+/Ca2+ exchanger 2 {Ipomoea nil},
partial (15%)
Length = 473
Score = 43.5 bits (101), Expect = 2e-04
Identities = 19/39 (48%), Positives = 24/39 (60%)
Frame = +3
Query: 361 VPLSVIVAWIMGIKMDLDFNLLETGCLAFAIIVTAFTLQ 399
+P V++ WI G MDL+F L ET L +IV AF LQ
Sbjct: 54 IPFCVVIGWITGHPMDLNFQLFETAVLFLTVIVVAFMLQ 170
Score = 40.0 bits (92), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 398 LQDGTSHYMKGVVLTLCYLVIAACFFVN 425
LQ+GT++Y KG++L LCYL++A F+V+
Sbjct: 320 LQEGTANYFKGLMLILCYLIVATNFYVH 403
>BM527067 GP|4512263|dbj H+/Ca2+ exchanger 2 {Ipomoea nil}, partial (6%)
Length = 421
Score = 35.0 bits (79), Expect = 0.069
Identities = 19/29 (65%), Positives = 23/29 (78%)
Frame = +1
Query: 343 DISLGVAMGSATQISMFVVPLSVIVAWIM 371
DISLGVA+GS+TQISMFV S+I + M
Sbjct: 109 DISLGVAIGSSTQISMFVA--SIIYLYCM 189
>TC235120 similar to UP|Q9ZQT4 (Q9ZQT4) H+/Ca2+ exchanger 2, partial (10%)
Length = 570
Score = 33.9 bits (76), Expect = 0.15
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 39 DSVLVTNNINARFQMLRIFMTNLRVVLLGTKLVVLFPAVPLAVAADFYKFGRPWIFAFSL 98
D+ +V ++ F RI ++ VVL+ K+ +L P PLA+ + W+F F+L
Sbjct: 385 DTSVVDLRSSSIFNTTRI-SRSIYVVLIKAKINLLLPFGPLAILLHYLTGHHGWVFFFTL 561
Query: 99 LGL 101
LG+
Sbjct: 562 LGI 570
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.325 0.139 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,309,260
Number of Sequences: 63676
Number of extensions: 238588
Number of successful extensions: 1714
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of query: 449
length of database: 12,639,632
effective HSP length: 100
effective length of query: 349
effective length of database: 6,272,032
effective search space: 2188939168
effective search space used: 2188939168
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0346.7