BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0135.11
(664 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC218783 similar to UP|Q40363 (Q40363) NuM1 protein, partial (19%) 236 3e-62
TC218782 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone n... 145 5e-62
TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (... 220 2e-57
TC219555 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone n... 159 4e-39
TC218887 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone n... 144 2e-34
CA820211 weakly similar to PIR|T06458|T064 nucleolin homolog - g... 105 5e-23
AW597712 weakly similar to PIR|T06458|T064 nucleolin homolog - g... 102 7e-22
TC204079 similar to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding ... 94 1e-19
TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, co... 89 8e-18
TC206524 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 84 2e-16
TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding ... 82 8e-16
AW756886 similar to GP|10178188|db poly(A)-binding protein II-li... 74 3e-13
TC227844 similar to UP|Q9FJN9 (Q9FJN9) Poly(A)-binding protein I... 73 5e-13
TC204093 similar to UP|ROC1_NICSY (Q08935) 29 kDa ribonucleoprot... 71 2e-12
TC204085 similar to UP|Q8VX74 (Q8VX74) Glycine-rich RNA-binding ... 70 2e-12
BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvo... 70 3e-12
TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%) 70 3e-12
TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1... 68 1e-11
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 67 2e-11
TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, ... 67 2e-11
>TC218783 similar to UP|Q40363 (Q40363) NuM1 protein, partial (19%)
Length = 870
Score = 236 bits (601), Expect = 3e-62
Identities = 167/330 (50%), Positives = 194/330 (58%), Gaps = 25/330 (7%)
Frame = +3
Query: 116 DEEEEVIAKKPTKVVVPK-KEESSSDEDSSSDEDSSSESDDEKPAAKVAVPAKKAPAKNG 174
DE+E K+ +V V K KEESSSD DSSS+S+DEKPAAKVAVP+K AKNG
Sbjct: 3 DEDELATKKQMNEVKVQKGKEESSSD-------DSSSDSEDEKPAAKVAVPSKNQSAKNG 161
Query: 175 SVTAPAKKAQPAPSSSSESEDDDSSEEDEPSAKQPKKEVAVKPAVQKKKEESSSDDSSSE 234
+++ AKK +PA SSSS DD+S+EDE PK +VA PA K S+ SE
Sbjct: 162 TLSTLAKKGKPAASSSSSESSDDNSDEDE----APKTKVA--PAAGKNGHASTKKTQPSE 323
Query: 235 SEDEKPAVKVSAPSKVVPAAVKNGAADSDSSDSDSSSDEDDDKKKPATKVAKKLPAAAPI 294
S +DSDSSDSDSSSDE KKKP T LP AP
Sbjct: 324 S------------------------SDSDSSDSDSSSDEGKSKKKPTTAKLPTLP-VAPA 428
Query: 295 KKVEKSESSDDESSESSDEENDSKPATTTVAKPS--AVKKSASSDS-------------- 338
KKV ESSDDESSESSDE+ND+KPA T V+KPS A KK SSDS
Sbjct: 429 KKV---ESSDDESSESSDEDNDAKPAVTAVSKPSARAQKKVESSDSDDSSSDEDKGKMDI 599
Query: 339 -DDEDSSDSDSEVKKDKM---DVDESDSSED--SDEEDEKSTKTPQKKVKDVEMVDAS-S 391
DD+DSSD E +K K + SDSSE+ DE +EK +KTPQK+ +DVEMVDA+ S
Sbjct: 600 DDDDDSSDESEEPQKKKAVKNSKESSDSSEEDSEDESEEKPSKTPQKRGRDVEMVDAALS 779
Query: 392 GKNAPKTPAAQTENEG-SKTLFVGNLSFSV 420
K APKTP E G SKTLFVGNL FSV
Sbjct: 780 EKKAPKTPVTPREESGTSKTLFVGNLPFSV 869
Score = 105 bits (262), Expect = 6e-23
Identities = 82/212 (38%), Positives = 111/212 (51%), Gaps = 8/212 (3%)
Frame = +3
Query: 38 KQVSAKKQKIAEVAAKQKKETKLQKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTP 97
K SAK ++ +A K K S S DD+S EDE P KVAP + KNG
Sbjct: 138 KNQSAKNGTLSTLAKKGKPAAS----SSSSESSDDNSDEDEAPKTKVAP--AAGKNGHAS 299
Query: 98 AKKAKPAPS--SSSSDEDSSDEE-----EEVIAKKPTKVVVPKKEESSSDEDSSSDEDSS 150
KK +P+ S S SSD DSS +E + AK PT V P K+ SSD++SS +SS
Sbjct: 300 TKKTQPSESSDSDSSDSDSSSDEGKSKKKPTTAKLPTLPVAPAKKVESSDDESS---ESS 470
Query: 151 SESDDEKPA-AKVAVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDDSSEEDEPSAKQP 209
E +D KPA V+ P+ +A K S + + +DDDSS+E E +P
Sbjct: 471 DEDNDAKPAVTAVSKPSARAQKKVESSDSDDSSSDEDKGKMDIDDDDDSSDESE----EP 638
Query: 210 KKEVAVKPAVQKKKEESSSDDSSSESEDEKPA 241
+K+ AVK + K+ +SS +DS ESE EKP+
Sbjct: 639 QKKKAVKNS--KESSDSSEEDSEDESE-EKPS 725
Score = 83.2 bits (204), Expect = 3e-16
Identities = 76/256 (29%), Positives = 104/256 (39%), Gaps = 14/256 (5%)
Frame = +3
Query: 9 ATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQ----KKETKLQKVK 64
+T + P A++ S + EDE A K K+A A K K+T+ +
Sbjct: 168 STLAKKGKPAASSSSSESSDDNSDEDE------APKTKVAPAAGKNGHASTKKTQPSESS 329
Query: 65 KESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEE---- 120
SSD DSSS++ K K T+ K T P AK SS +SSDE+ +
Sbjct: 330 DSDSSDSDSSSDEGKSKKK----PTTAKLPTLPVAPAKKVESSDDESSESSDEDNDAKPA 497
Query: 121 VIAKKPTKVVVPKKEESSSDEDSSSDEDSSSE--SDDEKPAAKVAVPAKKAPAKNGSVTA 178
V A KK ESS +DSSSDED DD+ + + P KK KN
Sbjct: 498 VTAVSKPSARAQKKVESSDSDDSSSDEDKGKMDIDDDDDSSDESEEPQKKKAVKN----- 662
Query: 179 PAKKAQPAPSSSSESEDDDSSEEDEPSAKQPKKE----VAVKPAVQKKKEESSSDDSSSE 234
+ SS SE+D E +E +K P+K V A+ +KK + E
Sbjct: 663 -------SKESSDSSEEDSEDESEEKPSKTPQKRGRDVEMVDAALSEKKAPKTPVTPREE 821
Query: 235 SEDEKPAVKVSAPSKV 250
S K + P V
Sbjct: 822 SGTSKTLFVGNLPFSV 869
Score = 53.1 bits (126), Expect = 4e-07
Identities = 54/196 (27%), Positives = 68/196 (34%), Gaps = 6/196 (3%)
Frame = +3
Query: 3 KSSKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQK 62
KS KK T PVA A K +++DE + V A K + QK
Sbjct: 372 KSKKKPTTAKLPTLPVAPAKKV-----ESSDDESSESSDEDNDAKPAVTAVSKPSARAQK 536
Query: 63 VKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVI 122
+ S SDD SS ED+ D+DSSDE EE
Sbjct: 537 KVESSDSDDSSSDEDK-------------------------GKMDIDDDDDSSDESEEPQ 641
Query: 123 AKKPTKVVVPKKEESSSDEDSSSDEDSSSESDDEKPAAKVAVPAKKAPAKNG------SV 176
KK K +S E S S E+ S + +EKP+ K P K G
Sbjct: 642 KKKAVK---------NSKESSDSSEEDSEDESEEKPS--------KTPQKRGRDVEMVDA 770
Query: 177 TAPAKKAQPAPSSSSE 192
KKA P + E
Sbjct: 771 ALSEKKAPKTPVTPRE 818
>TC218782 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone na-481-5),
partial (20%)
Length = 925
Score = 145 bits (366), Expect(2) = 5e-62
Identities = 108/220 (49%), Positives = 132/220 (59%), Gaps = 6/220 (2%)
Frame = +1
Query: 88 KTSVKNG--TTPAKKAKPAPSSSSSD--EDSSDEEEEVIAKKPTKVVVPKKEESSSDEDS 143
KT KNG +TPAKK K A SSSSSD ED S +E+EV KK TK V +K + E+S
Sbjct: 13 KTPTKNGNLSTPAKKGKAASSSSSSDSSEDDSSDEDEVATKKQTKEVKVQKGK----EES 180
Query: 144 SSDEDSSSESDDEKPAAKVAVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDDSSEEDE 203
SSD DSSSES+DEKPAAKVAVP K AKNG+++ PA+K +PA SSSS DD S+EDE
Sbjct: 181 SSD-DSSSESEDEKPAAKVAVPPKNQSAKNGTLSTPAEKGKPAASSSSSESSDDDSDEDE 357
Query: 204 PSAKQPKKEVAVKPAVQKKKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVKNGAADSD 263
PK +VA PA K S+ K++ PS+ +++SD
Sbjct: 358 ----APKSKVA--PAAGKNVPAST---------------KITQPSE---------SSESD 447
Query: 264 SSDSDSSSDEDDDKKKPATKVAKKLPA--AAPIKKVEKSE 301
S DSSSDED +KKKPAT KLPA AP KV K++
Sbjct: 448 S---DSSSDEDKNKKKPAT---AKLPALSVAPALKVGKAQ 549
Score = 137 bits (345), Expect = 2e-32
Identities = 85/171 (49%), Positives = 110/171 (63%), Gaps = 13/171 (7%)
Frame = +1
Query: 164 VPAKKAPAKNGSVTAPAKKAQPAPSSSS-ESEDDDSSEEDEPSAKQPKKEVAVKPAVQKK 222
VP+KK P KNG+++ PAKK + A SSSS +S +DDSS+EDE + K+ KEV V QK
Sbjct: 1 VPSKKTPTKNGNLSTPAKKGKAASSSSSSDSSEDDSSDEDEVATKKQTKEVKV----QKG 168
Query: 223 KEESSSDDSSSESEDEKPAVKVSAPSK-------VVPAAVKNGAADSDSSDSDSSSDEDD 275
KEESSSDDSSSESEDEKPA KV+ P K + + G + SS S+SS D+ D
Sbjct: 169 KEESSSDDSSSESEDEKPAAKVAVPPKNQSAKNGTLSTPAEKGKPAASSSSSESSDDDSD 348
Query: 276 DKKKPATKVA----KKLPAAAPIKKVEKSESSDDESSESSDEE-NDSKPAT 321
+ + P +KVA K +PA+ I + SESS+ +S SSDE+ N KPAT
Sbjct: 349 EDEAPKSKVAPAAGKNVPASTKI--TQPSESSESDSDSSSDEDKNKKKPAT 495
Score = 111 bits (278), Expect(2) = 5e-62
Identities = 70/131 (53%), Positives = 84/131 (63%), Gaps = 21/131 (16%)
Frame = +3
Query: 298 EKSESSDDESSESSDEENDSKPATTTVAKPSAV--KKSASSDSD-------------DED 342
E +SSDDESSESSDE+ND+KPA T V+KPSA+ KK SSDSD D+D
Sbjct: 531 ESGKSSDDESSESSDEDNDAKPAVTDVSKPSALAKKKVDSSDSDDSSSDEDKGKMDIDDD 710
Query: 343 SSDSDSEVKKDKM---DVDESDSSED--SDEEDEKSTKTPQKKVKDVEMVD-ASSGKNAP 396
SSD E +K K + SDSSE+ DE +E+ +KTPQK+ +DVEMVD ASSGK AP
Sbjct: 711 SSDESEEPQKKKTVKNPKESSDSSEEDSEDESEEEPSKTPQKRDRDVEMVDAASSGKKAP 890
Query: 397 KTPAAQTENEG 407
KTP E G
Sbjct: 891 KTPVTPKEETG 923
Score = 96.3 bits (238), Expect(2) = 5e-29
Identities = 76/185 (41%), Positives = 98/185 (52%), Gaps = 18/185 (9%)
Frame = +1
Query: 5 SKKSATKVEAAAPVAAAPKSAKKAKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKVK 64
SKK+ TK ++ K K A ++ + + S+ + ++A KQ KE K+QK K
Sbjct: 7 SKKTPTK---NGNLSTPAKKGKAASSSSSSDSSEDDSSDEDEVA--TKKQTKEVKVQKGK 171
Query: 65 KESSSDDDSS-SEDEKPAPKVA--PLKTSVKNGT--TPAKKAKPAPSSSSSDEDSSDEEE 119
+ESSSDD SS SEDEKPA KVA P S KNGT TPA+K KPA SSSSS+ SSD++
Sbjct: 172 EESSSDDSSSESEDEKPAAKVAVPPKNQSAKNGTLSTPAEKGKPAASSSSSE--SSDDDS 345
Query: 120 EVIAKKPTKV-------------VVPKKEESSSDEDSSSDEDSSSESDDEKPAAKVAVPA 166
+ +KV + E S SD DSSSDED + +KPA
Sbjct: 346 DEDEAPKSKVAPAAGKNVPASTKITQPSESSESDSDSSSDEDKNK----KKPATAKLPAL 513
Query: 167 KKAPA 171
APA
Sbjct: 514 SVAPA 528
Score = 67.0 bits (162), Expect = 3e-11
Identities = 50/165 (30%), Positives = 73/165 (43%), Gaps = 27/165 (16%)
Frame = +1
Query: 240 PAVKVSAPSKVVPAAVKNGAADSDSSDSDSSSDEDDDKKKPATKVAKKLPAAAPIKKVEK 299
P+ K + + K G A S SS SDSS D+ D+ + AT KK ++K ++
Sbjct: 4 PSKKTPTKNGNLSTPAKKGKAASSSSSSDSSEDDSSDEDEVAT---KKQTKEVKVQKGKE 174
Query: 300 SESSDDESSESSDEENDSKPATT---------TVAKPSAVKKSASSDSDDEDSSDSDSEV 350
SSDD SSES DE+ +K A T++ P+ K A+S S E S D E
Sbjct: 175 ESSSDDSSSESEDEKPAAKVAVPPKNQSAKNGTLSTPAEKGKPAASSSSSESSDDDSDED 354
Query: 351 KKDKMDV------------------DESDSSEDSDEEDEKSTKTP 377
+ K V + S+S DS +++K+ K P
Sbjct: 355 EAPKSKVAPAAGKNVPASTKITQPSESSESDSDSSSDEDKNKKKP 489
Score = 58.9 bits (141), Expect = 7e-09
Identities = 40/112 (35%), Positives = 53/112 (46%)
Frame = +3
Query: 100 KAKPAPSSSSSDEDSSDEEEEVIAKKPTKVVVPKKEESSSDEDSSSDEDSSSESDDEKPA 159
K+ SS SSDED+ + KP+ + KK +SS +DSSSDED D+ +
Sbjct: 540 KSSDDESSESSDEDNDAKPAVTDVSKPS-ALAKKKVDSSDSDDSSSDEDKGKMDIDDDSS 716
Query: 160 AKVAVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDDSSEEDEPSAKQPKK 211
+ P KK KN P SS S ED + E+EPS K P+K
Sbjct: 717 DESEEPQKKKTVKN-----------PKESSDSSEEDSEDESEEEPS-KTPQK 836
Score = 54.3 bits (129), Expect = 2e-07
Identities = 50/151 (33%), Positives = 62/151 (40%), Gaps = 1/151 (0%)
Frame = +3
Query: 138 SSDEDSSSDEDSSSESDDEKPAAKVAVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDD 197
SS E S +D SSES DE AK AV P+ A AKK + S S D+D
Sbjct: 522 SSFESGKSSDDESSESSDEDNDAKPAVTDVSKPS------ALAKKKVDSSDSDDSSSDED 683
Query: 198 SSEED-EPSAKQPKKEVAVKPAVQKKKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVK 256
+ D + + +E K V+ KE SSD S +SEDE P K
Sbjct: 684 KGKMDIDDDSSDESEEPQKKKTVKNPKE--SSDSSEEDSEDESEEEPSKTPQK------- 836
Query: 257 NGAADSDSSDSDSSSDEDDDKKKPATKVAKK 287
D D D++S KK P T V K
Sbjct: 837 ---RDRDVEMVDAAS---SGKKAPKTPVTPK 911
Score = 50.4 bits (119), Expect(2) = 5e-29
Identities = 34/131 (25%), Positives = 55/131 (41%)
Frame = +3
Query: 189 SSSESEDDDSSEEDEPSAKQPKKEVAVKPAVQKKKEESSSDDSSSESEDEKPAVKVSAPS 248
S S+D+ S DE + +P KP+ KK+ SSD S S+++K + +
Sbjct: 534 SGKSSDDESSESSDEDNDAKPAVTDVSKPSALAKKKVDSSDSDDSSSDEDKGKMDI---- 701
Query: 249 KVVPAAVKNGAADSDSSDSDSSSDEDDDKKKPATKVAKKLPAAAPIKKVEKSESSDDESS 308
D DSS + ++ +KK K K E S+SS+++S
Sbjct: 702 -----------------DDDSSDESEEPQKKKTVKNPK-----------ESSDSSEEDSE 797
Query: 309 ESSDEENDSKP 319
+ S+EE P
Sbjct: 798 DESEEEPSKTP 830
Score = 48.9 bits (115), Expect = 7e-06
Identities = 42/125 (33%), Positives = 50/125 (39%), Gaps = 19/125 (15%)
Frame = +3
Query: 65 KESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSS-----------DED 113
+ S DD SSE P T V + AKK + S S D+D
Sbjct: 531 ESGKSSDDESSESSDEDNDAKPAVTDVSKPSALAKKKVDSSDSDDSSSDEDKGKMDIDDD 710
Query: 114 SSDEEEEVIAKKPTKVVVPKKEESSSDEDSSSDEDSSSESDDEKPAAK--------VAVP 165
SSDE EE KK K PK+ SS+EDS ED S E + P + A
Sbjct: 711 SSDESEEPQKKKTVK--NPKESSDSSEEDS---EDESEEEPSKTPQKRDRDVEMVDAASS 875
Query: 166 AKKAP 170
KKAP
Sbjct: 876 GKKAP 890
Score = 46.2 bits (108), Expect = 5e-05
Identities = 36/101 (35%), Positives = 47/101 (45%)
Frame = +3
Query: 28 AKRAAEDEVEKQVSAKKQKIAEVAAKQKKETKLQKVKKESSSDDDSSSEDEKPAPKVAPL 87
AK A D + AKK+ V + ++ + K + DDDSS E E+P
Sbjct: 588 AKPAVTDVSKPSALAKKK----VDSSDSDDSSSDEDKGKMDIDDDSSDESEEPQK----- 740
Query: 88 KTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVIAKKPTK 128
K +VKN P SS SS+EDS DE EE +K P K
Sbjct: 741 KKTVKN---------PKESSDSSEEDSEDESEEEPSKTPQK 836
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/93 (31%), Positives = 42/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 321 TTTVAKPSAVKKSASSDSDDEDSSDSDS-EVKKDKMDVDESDSSEDSDEEDEKSTKTPQK 379
+T K A S+SSDS ++DSSD D KK +V E+S +D S +K
Sbjct: 40 STPAKKGKAASSSSSSDSSEDDSSDEDEVATKKQTKEVKVQKGKEESSSDDSSSESEDEK 219
Query: 380 KVKDVEMVDAS-SGKNAP-KTPAAQTENEGSKT 410
V + + S KN TPA + + S +
Sbjct: 220 PAAKVAVPPKNQSAKNGTLSTPAEKGKPAASSS 318
Score = 37.7 bits (86), Expect = 0.017
Identities = 36/152 (23%), Positives = 55/152 (35%), Gaps = 26/152 (17%)
Frame = +1
Query: 285 AKKLPAAAPIKKVEKSESSDDESSESSDEEND-----SKPATTTVAKPSAVKKSASSDSD 339
+KK P + SS SSD D + AT K V+K S
Sbjct: 7 SKKTPTKNGNLSTPAKKGKAASSSSSSDSSEDDSSDEDEVATKKQTKEVKVQKGKEESSS 186
Query: 340 DEDSSDSDSEVKKDKMDVD---------------------ESDSSEDSDEEDEKSTKTPQ 378
D+ SS+S+ E K+ V S SS +S ++D + P+
Sbjct: 187 DDSSSESEDEKPAAKVAVPPKNQSAKNGTLSTPAEKGKPAASSSSSESSDDDSDEDEAPK 366
Query: 379 KKVKDVEMVDASSGKNAPKTPAAQTENEGSKT 410
KV ++GKN P + +E S++
Sbjct: 367 SKVA------PAAGKNVPASTKITQPSESSES 444
Score = 30.0 bits (66), Expect = 3.5
Identities = 32/97 (32%), Positives = 40/97 (40%), Gaps = 11/97 (11%)
Frame = -3
Query: 67 SSSDDDSSSEDEKPAPKVAPLKTSVKNGTTP-------AKKAKPAPSSSSSDEDSSDEEE 119
+SS +SSS+D A L S P A A SSSD D +E
Sbjct: 359 ASSSSESSSDDSDELELAAGLPFSAGVLRVPFLAD*FFGGTATFAAGFSSSDSD--EESS 186
Query: 120 EVIAKKP----TKVVVPKKEESSSDEDSSSDEDSSSE 152
E+++ P T V SSS E+SSSDE E
Sbjct: 185 ELLSSLPFCTFTSFVCFFVATSSSSEESSSDESEELE 75
Score = 28.9 bits (63), Expect = 7.7
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = -3
Query: 188 SSSSESEDDDSSEEDEPSAKQPKKEVAVKPAVQK----KKEESSSDDSSSESEDEKPAVK 243
SSSSES DDS E + + V P + ++ SSS+S++E +
Sbjct: 356 SSSSESSSDDSDELELAAGLPFSAGVLRVPFLAD*FFGGTATFAAGFSSSDSDEESSELL 177
Query: 244 VSAPSKVVPAAVKNGAADSDSSDSDSSSDEDDD 276
S P + V A S SS+ +SSSDE ++
Sbjct: 176 SSLPFCTFTSFVCFFVATSSSSE-ESSSDESEE 81
>TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (clone
na-481-5), partial (20%)
Length = 752
Score = 220 bits (560), Expect = 2e-57
Identities = 117/174 (67%), Positives = 134/174 (76%), Gaps = 14/174 (8%)
Frame = +2
Query: 505 RGQSQTVFVRGFDKFQGEDDIKSSLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDT 564
RGQSQT+FVRGFD GED+I+ SLQEHFGSCG+ITR+S+PKD+ESG VKGFAY+DF D
Sbjct: 5 RGQSQTIFVRGFDTSLGEDEIRGSLQEHFGSCGDITRVSIPKDYESGAVKGFAYVDFGDA 184
Query: 565 NSVNKALELHDSDLGGFTLAVDEAKPRDNQGSGGRSGGGRSG--------GGRGGRFDSG 616
+S+ KALELH+++LGG+TL VDEAKPRDNQGSGGR GGRSG GG GGRF +
Sbjct: 185 DSMGKALELHETELGGYTLTVDEAKPRDNQGSGGRGAGGRSGGGGRFGARGGGGGRFGAR 364
Query: 617 RGGGR-GRFGSGGR-GGDRGGR-GGRGGGGRGGRGTP-LRAE--GKKTTFADED 664
GGGR G G GGR GG GGR GGRGGGGRG P L AE GKKT FAD++
Sbjct: 365 GGGGRFGGSGGGGRFGGSGGGRFGGRGGGGRGRGNRPNLAAEGTGKKTKFADDE 526
Score = 45.1 bits (105), Expect = 1e-04
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +2
Query: 404 ENEGSKTLFVGNLSFSVQ----RSDVENFFKDCGEVVDVRLATD-EDGRFKGFGHVEFAT 458
E S+T+FV S+ R ++ F CG++ V + D E G KGF +V+F
Sbjct: 2 ERGQSQTIFVRGFDTSLGEDEIRGSLQEHFGSCGDITRVSIPKDYESGAVKGFAYVDFGD 181
Query: 459 AAAAQSALEYNGSELLQRPVRLDLARERGAYTPNSGAANNSFQKGGRGQ 507
A + ALE + +EL + +D A+ R SG + GG G+
Sbjct: 182 ADSMGKALELHETELGGYTLTVDEAKPRD--NQGSGGRGAGGRSGGGGR 322
>TC219555 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone na-481-5),
partial (16%)
Length = 647
Score = 159 bits (402), Expect = 4e-39
Identities = 104/177 (58%), Positives = 120/177 (67%), Gaps = 7/177 (3%)
Frame = +3
Query: 1 MPKSSKKSATKVEAAAPVAAAPKSAKKA-KRAAEDEVEKQVSAKKQKIAEVAAKQKKETK 59
M KSSKKSA KV+A V KSAKK KR A+DE+EKQ+SAKKQKI EVA KQ KE K
Sbjct: 132 MGKSSKKSALKVDAVPAVVPPSKSAKKGGKRQAQDEIEKQLSAKKQKINEVAQKQ-KEAK 308
Query: 60 LQKVKKESSSDDDSS-SEDEKPAPKVAPL--KTSVKNGTTPAKKAKPAPSSSSSDEDSSD 116
+Q KKESSSDD SS SEDEKPAPK A L K KNG P KK K A SSS ED S
Sbjct: 309 VQ--KKESSSDDSSSESEDEKPAPKSAVLSKKIPAKNGAAPPKKGKLA---SSSSEDDSS 473
Query: 117 EEEEVIAKKPTKVVVPKKEESSSDED---SSSDEDSSSESDDEKPAAKVAVPAKKAP 170
+E+ V AKKP K+V K++ ++ + SS +DSSSES+ EKPA K VP+KK P
Sbjct: 474 DEDGVRAKKPQKMVAEKQKNGATVQKKKVESSSDDSSSESEAEKPAVKATVPSKKTP 644
Score = 130 bits (328), Expect = 1e-30
Identities = 83/171 (48%), Positives = 106/171 (61%), Gaps = 6/171 (3%)
Frame = +3
Query: 88 KTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEEVIAKKPTKV--VVPKKEESSSDEDSSS 145
K+++K PA + + DE E+ ++ K K+ V K++E+ + SS
Sbjct: 150 KSALKVDAVPAVVPPSKSAKKGGKRQAQDEIEKQLSAKKQKINEVAQKQKEAKVQKKESS 329
Query: 146 DEDSSSESDDEKPAAKVAVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDDSSEEDEPS 205
+DSSSES+DEKPA K AV +KK PAKNG+ AP KK + A SSS +DDSS+ED
Sbjct: 330 SDDSSSESEDEKPAPKSAVLSKKIPAKNGA--APPKKGKLASSSS----EDDSSDEDGVR 491
Query: 206 AKQPKKEVAVK----PAVQKKKEESSSDDSSSESEDEKPAVKVSAPSKVVP 252
AK+P+K VA K VQKKK ESSSDDSSSESE EKPAVK + PSK P
Sbjct: 492 AKKPQKMVAEKQKNGATVQKKKVESSSDDSSSESEAEKPAVKATVPSKKTP 644
Score = 94.4 bits (233), Expect = 1e-19
Identities = 78/189 (41%), Positives = 98/189 (51%), Gaps = 9/189 (4%)
Frame = +3
Query: 149 SSSESDDEKPAAKV-AVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDDSSEEDEPSAK 207
S +K A KV AVPA P+K+ AKK + + D E+ + K
Sbjct: 126 SKMGKSSKKSALKVDAVPAVVPPSKS------AKKG-------GKRQAQDEIEKQLSAKK 266
Query: 208 QPKKEVAVKPAVQK-KKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVKNGAAD----- 261
Q EVA K K +K+ESSSDDSSSESEDEKPA K + SK +PA KNGAA
Sbjct: 267 QKINEVAQKQKEAKVQKKESSSDDSSSESEDEKPAPKSAVLSKKIPA--KNGAAPPKKGK 440
Query: 262 -SDSSDSDSSSDEDDDK-KKPATKVAKKLPAAAPIKKVEKSESSDDESSESSDEENDSKP 319
+ SS D SSDED + KKP VA+K A ++K + SSDD SSES E+ K
Sbjct: 441 LASSSSEDDSSDEDGVRAKKPQKMVAEKQKNGATVQKKKVESSSDDSSSESEAEKPAVKA 620
Query: 320 ATTTVAKPS 328
+ P+
Sbjct: 621 TVPSKKTPT 647
Score = 58.9 bits (141), Expect = 7e-09
Identities = 60/189 (31%), Positives = 77/189 (39%), Gaps = 9/189 (4%)
Frame = +3
Query: 231 SSSESEDEKPAVKVSAPSKVVPAAVKNGAADSDSSDSDSSSDEDDDKKKPATKVAKKLPA 290
S +K A+KV A VVP + K+ D + KK+ +VA+K
Sbjct: 126 SKMGKSSKKSALKVDAVPAVVPPS-KSAKKGGKRQAQDEIEKQLSAKKQKINEVAQKQKE 302
Query: 291 AAPIKKVEKSESS-DDESSESSDEENDSK--------PATTTVAKPSAVKKSASSDSDDE 341
A KV+K ESS DD SSES DE+ K PA A P K ++SS DD
Sbjct: 303 A----KVQKKESSSDDSSSESEDEKPAPKSAVLSKKIPAKNGAAPPKKGKLASSSSEDDS 470
Query: 342 DSSDSDSEVKKDKMDVDESDSSEDSDEEDEKSTKTPQKKVKDVEMVDASSGKNAPKTPAA 401
D K KM E +K+ T QKK + D+SS A K PA
Sbjct: 471 SDEDGVRAKKPQKMVA-----------EKQKNGATVQKKKVESSSDDSSSESEAEK-PAV 614
Query: 402 QTENEGSKT 410
+ KT
Sbjct: 615 KATVPSKKT 641
Score = 52.8 bits (125), Expect = 5e-07
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Frame = +3
Query: 205 SAKQPKKEVAVKPAVQKKKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVKNGAAD--- 261
S+K+ +V PAV + S+ +++DE + K+ A K A
Sbjct: 141 SSKKSALKVDAVPAVVPPSK-SAKKGGKRQAQDEIEKQLSAKKQKINEVAQKQKEAKVQK 317
Query: 262 -SDSSDSDSSSDEDDDKKKPATKVAKKLPA---AAPIKKVEKSESSDDESSESSDEENDS 317
SSD SS ED+ + ++KK+PA AAP KK + + SS ++ S D
Sbjct: 318 KESSSDDSSSESEDEKPAPKSAVLSKKIPAKNGAAPPKKGKLASSSSEDDSSDEDGVRAK 497
Query: 318 KPATTTVAKP---SAVKKSASSDSDDEDSSDSDSE 349
KP K + V+K S D+ SS+S++E
Sbjct: 498 KPQKMVAEKQKNGATVQKKKVESSSDDSSSESEAE 602
>TC218887 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone na-481-5),
partial (13%)
Length = 559
Score = 144 bits (362), Expect = 2e-34
Identities = 88/141 (62%), Positives = 99/141 (69%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 MPKSSKKSATKVEAAAPVAAAPKSAKKA-KRAAEDEVEKQVSAKKQKIAEVAAKQKKETK 59
M KSSKKSA KV+AA V KSAKK KR A+DE+EKQVSAKKQKI EVA KQKKE K
Sbjct: 145 MGKSSKKSAIKVDAAPAVVPPSKSAKKGGKRQAQDEIEKQVSAKKQKIEEVAQKQKKEAK 324
Query: 60 LQKVKKESSSDDDSSSEDEKPAPK-VAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEE 118
+QK KKESSSDD S SE+EKPAPK V K KNG KK KP SSS ED S +E
Sbjct: 325 VQK-KKESSSDDSSESEEEKPAPKPVLSKKVPAKNGAALPKKDKPV---SSSSEDDSSDE 492
Query: 119 EEVIAKKPTKVVVPKKEESSS 139
+EV AKKP KVV K++ ++
Sbjct: 493 DEVNAKKPHKVVAEKQKNGAT 555
Score = 77.0 bits (188), Expect = 2e-14
Identities = 63/160 (39%), Positives = 85/160 (52%), Gaps = 2/160 (1%)
Frame = +1
Query: 59 KLQKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEE 118
K+ K K+S+ D+ AP V P P+K AK + DE E
Sbjct: 142 KMGKSSKKSAIKVDA-------APAVVP----------PSKSAKKGGKRQAQDEI----E 258
Query: 119 EEVIAKKPT--KVVVPKKEESSSDEDSSSDEDSSSESDDEKPAAKVAVPAKKAPAKNGSV 176
++V AKK +V +K+E+ + S D SSES++EKPA K V +KK PAKNG+
Sbjct: 259 KQVSAKKQKIEEVAQKQKKEAKVQKKKESSSDDSSESEEEKPAPK-PVLSKKVPAKNGA- 432
Query: 177 TAPAKKAQPAPSSSSESEDDDSSEEDEPSAKQPKKEVAVK 216
A KK +P SSS +DDSS+EDE +AK+P K VA K
Sbjct: 433 -ALPKKDKPVSSSS----EDDSSDEDEVNAKKPHKVVAEK 537
Score = 67.8 bits (164), Expect = 1e-11
Identities = 60/148 (40%), Positives = 79/148 (52%), Gaps = 10/148 (6%)
Frame = +1
Query: 157 KPAAKVAVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDDSSEEDEPSAKQPKKEVAVK 216
K + K A+ APA V P+K A+ + + D E+ + KQ +EVA K
Sbjct: 151 KSSKKSAIKVDAAPA----VVPPSKSAK----KGGKRQAQDEIEKQVSAKKQKIEEVAQK 306
Query: 217 P---AVQKKKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVKNGAA-------DSDSSD 266
A +KK+ESSSDDSS ESE+EKPA K SK VPA KNGAA S SS+
Sbjct: 307 QKKEAKVQKKKESSSDDSS-ESEEEKPAPK-PVLSKKVPA--KNGAALPKKDKPVSSSSE 474
Query: 267 SDSSSDEDDDKKKPATKVAKKLPAAAPI 294
DSS +++ + KKP VA+K A +
Sbjct: 475 DDSSDEDEVNAKKPHKVVAEKQKNGATV 558
Score = 55.5 bits (132), Expect = 8e-08
Identities = 45/146 (30%), Positives = 66/146 (44%)
Frame = +1
Query: 238 EKPAVKVSAPSKVVPAAVKNGAADSDSSDSDSSSDEDDDKKKPATKVAKKLPAAAPIKKV 297
+K A+KV A VVP + K+ D + KK+ +VA+K A ++K
Sbjct: 160 KKSAIKVDAAPAVVPPS-KSAKKGGKRQAQDEIEKQVSAKKQKIEEVAQKQKKEAKVQK- 333
Query: 298 EKSESSDDESSESSDEENDSKPATTTVAKPSAVKKSASSDSDDEDSSDSDSEVKKDKMDV 357
K ESS D+SSES +E+ KP ++K K A+ D+ S
Sbjct: 334 -KKESSSDDSSESEEEKPAPKP---VLSKKVPAKNGAALPKKDKPVS------------- 462
Query: 358 DESDSSEDSDEEDEKSTKTPQKKVKD 383
S S +DS +EDE + K P K V +
Sbjct: 463 --SSSEDDSSDEDEVNAKKPHKVVAE 534
Score = 52.8 bits (125), Expect = 5e-07
Identities = 42/131 (32%), Positives = 53/131 (40%)
Frame = +1
Query: 129 VVVPKKEESSSDEDSSSDEDSSSESDDEKPAAKVAVPAKKAPAKNGSVTAPAKKAQPAPS 188
VV P K + + DE S ++ +VA KK KK + +
Sbjct: 196 VVPPSKSAKKGGKRQAQDEIEKQVSAKKQKIEEVAQKQKKEAKVQ-------KKKESSSD 354
Query: 189 SSSESEDDDSSEEDEPSAKQPKKEVAVKPAVQKKKEESSSDDSSSESEDEKPAVKVSAPS 248
SSESE++ + + S K P K A P K SS DDSS E E V P
Sbjct: 355 DSSESEEEKPAPKPVLSKKVPAKNGAALPKKDKPVSSSSEDDSSDEDE-----VNAKKPH 519
Query: 249 KVVPAAVKNGA 259
KVV KNGA
Sbjct: 520 KVVAEKQKNGA 552
Score = 42.7 bits (99), Expect = 5e-04
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 205 SAKQPKKEVAVKPAVQKKKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVKNGAADSDS 264
S+K+ +V PAV + S+ +++DE + K+ A K
Sbjct: 154 SSKKSAIKVDAAPAVVPPSK-SAKKGGKRQAQDEIEKQVSAKKQKIEEVAQKQKKEAKVQ 330
Query: 265 SDSDSSSDE--DDDKKKPATK--VAKKLP----AAAPIKKVEKSESSDDESSESSDEEND 316
+SSSD+ + +++KPA K ++KK+P AA P K S SS+D+SS+ DE N
Sbjct: 331 KKKESSSDDSSESEEEKPAPKPVLSKKVPAKNGAALPKKDKPVSSSSEDDSSD-EDEVNA 507
Query: 317 SKPATTTVAK 326
KP K
Sbjct: 508 KKPHKVVAEK 537
>CA820211 weakly similar to PIR|T06458|T064 nucleolin homolog - garden pea,
partial (12%)
Length = 327
Score = 105 bits (263), Expect = 5e-23
Identities = 48/98 (48%), Positives = 72/98 (72%)
Frame = +1
Query: 393 KNAPKTPAAQTENEGSKTLFVGNLSFSVQRSDVENFFKDCGEVVDVRLATDEDGRFKGFG 452
+++ + + +N KT++V NLS+ V+ +D+EN FK+CG++VDVRL + +GR GFG
Sbjct: 13 ESSKRVATLKEQNAPPKTIYVRNLSYRVEHADMENLFKECGKIVDVRLHRNHNGRLNGFG 192
Query: 453 HVEFATAAAAQSALEYNGSELLQRPVRLDLARERGAYT 490
VEFATA AA+ ALE + +ELL+RP+ +DLA E+G YT
Sbjct: 193 QVEFATAEAAKKALELHNTELLRRPIGVDLAEEKGEYT 306
Score = 39.3 bits (90), Expect = 0.006
Identities = 22/83 (26%), Positives = 46/83 (54%)
Frame = +1
Query: 509 QTVFVRGFDKFQGEDDIKSSLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNSVN 568
+T++VR D+++ +E CG+I + + ++ +G + GF ++F+ +
Sbjct: 61 KTIYVRNLSYRVEHADMENLFKE----CGKIVDVRLHRN-HNGRLNGFGQVEFATAEAAK 225
Query: 569 KALELHDSDLGGFTLAVDEAKPR 591
KALELH+++L + VD A+ +
Sbjct: 226 KALELHNTELLRRPIGVDLAEEK 294
>AW597712 weakly similar to PIR|T06458|T064 nucleolin homolog - garden pea,
partial (8%)
Length = 411
Score = 102 bits (253), Expect = 7e-22
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Frame = +1
Query: 333 SASSDSDDEDSSDSDSEVKKDKMDVDESDSSEDSDEEDEKS-----TKTPQKKVKDVEMV 387
SA+ S E +D SE MD+DE +SE+ E ++ K+ + K +E
Sbjct: 25 SANCSSSLESLADG-SEEDAGNMDIDEGYNSEECSEGTQEKMQVLPVKSSENSEKGIEEK 201
Query: 388 DASSGKNAPKTPAAQTE-NEGSKTLFVGNLSFSVQRSDVENFFKDCGEVVDVRLATDEDG 446
D+ + + PK + E N GSKT+ NLS+SV+R+D+EN FK CGEVVDVRL TD +G
Sbjct: 202 DSKAPQENPKMLSTPNERNAGSKTIVTRNLSYSVERADLENLFKPCGEVVDVRLHTDAEG 381
Query: 447 RFKGFGHVEF 456
RF+GFGHVEF
Sbjct: 382 RFRGFGHVEF 411
>TC204079 similar to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein,
complete
Length = 748
Score = 94.4 bits (233), Expect = 1e-19
Identities = 50/122 (40%), Positives = 68/122 (54%), Gaps = 1/122 (0%)
Frame = +1
Query: 528 SLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKALE-LHDSDLGGFTLAVD 586
+L+ F GEI + D E+G +GF ++ F+ S+ A+E ++ +L G + V+
Sbjct: 133 ALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVN 312
Query: 587 EAKPRDNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGG 646
EA+ R G GG GGG GGGRGG + G GG G + G GG GG GG GGGG GG
Sbjct: 313 EAQSRGGGGGGGGGGGG-YGGGRGGGYGGGGRGGGGGYNRSGGGGGYGGGGGYGGGGGGG 489
Query: 647 RG 648
G
Sbjct: 490 YG 495
Score = 52.8 bits (125), Expect = 5e-07
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +1
Query: 412 FVGNLSFSVQRSDVENFFKDCGEVVDVRLATD-EDGRFKGFGHVEFATAAAAQSALE-YN 469
FVG L+++ +E F GE+V+ ++ D E GR +GFG V FA+ + + A+E N
Sbjct: 97 FVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEGMN 276
Query: 470 GSELLQRPVRLDLARERGAYTPNSGAANNSFQKGGRG 506
G L R + ++ A+ RG G GGRG
Sbjct: 277 GQNLDGRNITVNEAQSRGG--GGGGGGGGGGYGGGRG 381
>TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, complete
Length = 1937
Score = 88.6 bits (218), Expect = 8e-18
Identities = 51/131 (38%), Positives = 68/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 528 SLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKAL-ELHDSDLGGFTLAVD 586
+L+ F GEI + D E+G +GF ++ F+ S+ A+ ++ +L G + V+
Sbjct: 1286 ALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGAMNGQNLDGRNITVN 1465
Query: 587 EAKPRDNQGSGGRSGGG--RSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGR 644
EA+ R G GG GGG R GGG GGR G GGG R GG GG GG GG G GG
Sbjct: 1466 EAQSRGGGGGGGGGGGGYNRGGGGYGGRSGGGGGGGGYRSRDGGYGGGYGGGGGGGYGGG 1645
Query: 645 GGRGTPLRAEG 655
RG +G
Sbjct: 1646 RDRGYSRGGDG 1678
Score = 64.3 bits (155), Expect = 2e-10
Identities = 56/189 (29%), Positives = 90/189 (46%), Gaps = 8/189 (4%)
Frame = -1
Query: 411 LFVGNLSFSVQRSDVENFFKDCGEVVDVRLATDE-DGRFKGFGHVEFATAAAAQSAL-EY 468
LFVGNL FSV + + F+ G V V + D+ GR +GFG V ++ A++A ++
Sbjct: 875 LFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAKQF 696
Query: 469 NGSELLQRPVRLDLA--RERGAYTPNSGAANNSFQKGGRGQSQTVFVRGFDKFQGEDDIK 526
NG EL R +R++ R P ++ +GG V + G DD+
Sbjct: 695 NGYELDGRSLRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENRVHVGNLAWGVDDV- 519
Query: 527 SSLQEHFGSCG-EITRISVPKDFESGNVKGFAYLDFSDTNSVNKALELHDS-DLGGFTLA 584
+L+ F G ++ V D ESG +GF ++ F + V A++ D DL G +
Sbjct: 518 -ALESLFREQGKKVLEARVIYDRESGRSRGFGFVTFGSPDEVKSAIQSLDGVDLNGRAIR 342
Query: 585 VD--EAKPR 591
V ++KP+
Sbjct: 341 VSLADSKPK 315
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/97 (31%), Positives = 50/97 (50%), Gaps = 2/97 (2%)
Frame = +2
Query: 412 FVGNLSFSVQRSDVENFFKDCGEVVDVRLATD-EDGRFKGFGHVEFATAAAAQSAL-EYN 469
FVG L+++ +E F GE+V+ ++ D E GR +GFG V FA+ + + A+ N
Sbjct: 1250 FVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGAMN 1429
Query: 470 GSELLQRPVRLDLARERGAYTPNSGAANNSFQKGGRG 506
G L R + ++ A+ RG G + +GG G
Sbjct: 1430 GQNLDGRNITVNEAQSRGG-GGGGGGGGGGYNRGGGG 1537
>TC206524 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (6%)
Length = 464
Score = 84.0 bits (206), Expect = 2e-16
Identities = 54/90 (60%), Positives = 56/90 (62%), Gaps = 17/90 (18%)
Frame = +3
Query: 592 DNQGSGGRSGGGRSGGGR---------GGRFDSGRGGGRGRFGSGGRGGDRGGR-----G 637
DNQGSGGR GGRSGGGR GGRF GRGGG GRFG G GG GG G
Sbjct: 3 DNQGSGGRGAGGRSGGGRFGGRSGGGGGGRF-GGRGGG-GRFGGSGGGGRFGGSGGGRFG 176
Query: 638 GRGGGGRGGRGTP-LRAE--GKKTTFADED 664
GRGGGGRG P L AE GKKT FAD++
Sbjct: 177 GRGGGGRGRGNRPNLAAEGTGKKTKFADDE 266
>TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding protein,
partial (95%)
Length = 1019
Score = 82.0 bits (201), Expect = 8e-16
Identities = 56/156 (35%), Positives = 75/156 (47%), Gaps = 12/156 (7%)
Frame = +2
Query: 512 FVRGFDKFQGEDDIKSSLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKAL 571
FV G G D +L++ F G+I V D E+G +GF ++ F+ S+ A+
Sbjct: 68 FVGGLAWVTGND----ALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAI 235
Query: 572 E-LHDSDLGGFTLAVDEAKPRDNQGSGG-----------RSGGGRSGGGRGGRFDSGRGG 619
++ DL G + V+EA+ R ++G GG R GG GGG GG + R G
Sbjct: 236 AGMNGQDLDGRNITVNEAQTRASRGGGGGGGFGSGGGYNRGSGGYGGGGGGGGYGGRREG 415
Query: 620 GRGRFGSGGRGGDRGGRGGRGGGGRGGRGTPLRAEG 655
G R G GG GG GGR RG GG GG EG
Sbjct: 416 GYNRNGGGGGGGYGGGR-DRGYGGDGGSRYSRGGEG 520
>AW756886 similar to GP|10178188|db poly(A)-binding protein II-like
{Arabidopsis thaliana}, partial (61%)
Length = 446
Score = 73.6 bits (179), Expect = 3e-13
Identities = 49/145 (33%), Positives = 79/145 (53%)
Frame = +3
Query: 336 SDSDDEDSSDSDSEVKKDKMDVDESDSSEDSDEEDEKSTKTPQKKVKDVEMVDASSGKNA 395
S +DDE + D D+ VK ++DE EE+ + + Q KV+ E+ NA
Sbjct: 6 SAADDEAAVDDDAAVK----ELDEMKRRLKEMEEEAAALREMQAKVEK-EIGSVQDPANA 170
Query: 396 PKTPAAQTENEGSKTLFVGNLSFSVQRSDVENFFKDCGEVVDVRLATDEDGRFKGFGHVE 455
+ A + E + ++++FVGN+ ++ +V+ F+ CG V V + TD+ G+ KGF +VE
Sbjct: 171 AASQANKEEAD-ARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVE 347
Query: 456 FATAAAAQSALEYNGSELLQRPVRL 480
F A A Q AL N SEL R +++
Sbjct: 348 FVEAEAVQEALLLNESELHGRQLKV 422
Score = 53.1 bits (126), Expect = 4e-07
Identities = 34/110 (30%), Positives = 61/110 (54%)
Frame = +3
Query: 476 RPVRLDLARERGAYTPNSGAANNSFQKGGRGQSQTVFVRGFDKFQGEDDIKSSLQEHFGS 535
R ++ + +E G+ + AA + K +++VFV D +++ Q+HF S
Sbjct: 111 REMQAKVEKEIGSVQDPANAAASQANKE-EADARSVFVGNVDYACTPEEV----QQHFQS 275
Query: 536 CGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKALELHDSDLGGFTLAV 585
CG + R+++ D + G KGFAY++F + +V +AL L++S+L G L V
Sbjct: 276 CGTVNRVTILTD-KFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKV 422
>TC227844 similar to UP|Q9FJN9 (Q9FJN9) Poly(A)-binding protein II-like,
partial (80%)
Length = 1013
Score = 72.8 bits (177), Expect = 5e-13
Identities = 46/143 (32%), Positives = 76/143 (52%), Gaps = 8/143 (5%)
Frame = +3
Query: 350 VKKDKMDVDESDSSEDSDE--------EDEKSTKTPQKKVKDVEMVDASSGKNAPKTPAA 401
++ D +D+ +D+SE+ D+ EDE + + + EM A NA + A
Sbjct: 177 MENDDVDMHAADTSEELDDMKKRLKEMEDEAAALREMQAKVEKEMGSAQDPANASASQAN 356
Query: 402 QTENEGSKTLFVGNLSFSVQRSDVENFFKDCGEVVDVRLATDEDGRFKGFGHVEFATAAA 461
+ E + S+++FVGN+ +S +V+ F+ CG V V + TD+ G+ KG+ +VEF A
Sbjct: 357 KEEID-SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA 533
Query: 462 AQSALEYNGSELLQRPVRLDLAR 484
Q AL N SEL R +++ R
Sbjct: 534 VQEALLLNESELHGRQLKVTAKR 602
Score = 51.6 bits (122), Expect = 1e-06
Identities = 40/138 (28%), Positives = 70/138 (49%), Gaps = 3/138 (2%)
Frame = +3
Query: 476 RPVRLDLARERGAYTPNSGAANNSFQKGGRGQSQTVFVRGFDKFQGEDDIKSSLQEHFGS 535
R ++ + +E G+ + A+ + K S++VFV D +++ Q+HF S
Sbjct: 279 REMQAKVEKEMGSAQDPANASASQANKE-EIDSRSVFVGNVDYSCTPEEV----QQHFQS 443
Query: 536 CGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKALELHDSDLGGFTLAVDEAK---PRD 592
CG + R+++ D + G KG+AY++F + +V +AL L++S+L G L V + P
Sbjct: 444 CGTVNRVTIRTD-KFGQPKGYAYVEFLEVEAVQEALLLNESELHGRQLKVTAKRTNIPGM 620
Query: 593 NQGSGGRSGGGRSGGGRG 610
Q R+ GG RG
Sbjct: 621 KQYRPRRTINPYMGGFRG 674
>TC204093 similar to UP|ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A,
chloroplast precursor (CP29A), partial (63%)
Length = 1403
Score = 70.9 bits (172), Expect = 2e-12
Identities = 56/189 (29%), Positives = 90/189 (46%), Gaps = 5/189 (2%)
Frame = +2
Query: 411 LFVGNLSFSVQRSDVENFFKDCGEVVDVRLATDED-GRFKGFGHVEFATAAAAQSALE-Y 468
LFVGNL F+V + + F+ G V V + D+ GR +GFG V ++ A++A + +
Sbjct: 335 LFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQF 514
Query: 469 NGSELLQRPVRLDLARE--RGAYTPNSGAANNSFQKGGRGQSQTVFVRGFDKFQGEDDIK 526
NG EL R +R++ R P ++ +GG V + G D++
Sbjct: 515 NGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGVDNV- 691
Query: 527 SSLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKALE-LHDSDLGGFTLAV 585
+L+ F G + V D ESG +GF ++ FS + VN A++ L+ DL G + V
Sbjct: 692 -ALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRV 868
Query: 586 DEAKPRDNQ 594
A + Q
Sbjct: 869 SLADSKPKQ 895
>TC204085 similar to UP|Q8VX74 (Q8VX74) Glycine-rich RNA-binding protein,
partial (87%)
Length = 628
Score = 70.5 bits (171), Expect = 2e-12
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 16/132 (12%)
Frame = +3
Query: 529 LQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKALE-LHDSDLGGFTLAVDE 587
L++ F G++ + D E+G +GF ++ F+ +S+ A+E ++ +L G + V+E
Sbjct: 75 LEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIEGMNGQNLDGRNITVNE 254
Query: 588 AKPRDNQGSGGR---SGGG--RSGG--GRGGRFDSG---RGGGRG-----RFGSGGRGGD 632
A+ R ++G GG SGGG RSGG G GGR + GGG G R+G G GG
Sbjct: 255 AQSRGSRGGGGGGYGSGGGYNRSGGAGGYGGRREGAYNRNGGGYGGDRDHRYGPYGDGGS 434
Query: 633 RGGRGGRGGGGR 644
R RGG G R
Sbjct: 435 RYSRGGGDGSWR 470
>BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
nagariensis}, partial (25%)
Length = 407
Score = 70.1 bits (170), Expect = 3e-12
Identities = 34/59 (57%), Positives = 35/59 (58%)
Frame = +3
Query: 590 PRDNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
P G GG GGG GGG GG + G GGG G G GG GG GGRGG GGGG GG G
Sbjct: 18 PGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGG 194
Score = 68.9 bits (167), Expect = 7e-12
Identities = 33/54 (61%), Positives = 33/54 (61%)
Frame = +1
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
G GG GGG GGG GGR G GGG G G GG GG GG GG GGGG GG G
Sbjct: 40 GGGGGGGGGGGGGGGGGRGGEGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGG 201
Score = 67.4 bits (163), Expect = 2e-11
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = +1
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
G GG GGG GGGRGG + G GGG G G GG GG+ GG GG GGGG GG G
Sbjct: 49 GGGGGGGGGGGGGGRGG--EGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGG 204
Score = 67.4 bits (163), Expect = 2e-11
Identities = 34/53 (64%), Positives = 34/53 (64%)
Frame = +2
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGR 647
G GGR GGG GGG GG G GGG G G GG GG GG GG GGGGRGGR
Sbjct: 239 GRGGRGGGGGGGGGGGG----GGGGGGGGGGEGGGGGGGGGGGGGGGGGRGGR 385
Score = 66.6 bits (161), Expect = 3e-11
Identities = 34/60 (56%), Positives = 34/60 (56%)
Frame = +2
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRGTPLRAE 654
G GG GGG GGG GGR G GGG G G GG G GG GG GGGG GG G R E
Sbjct: 50 GGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGKGGGGGGGGGGGGGGGGGGGFFRGE 229
Score = 66.2 bits (160), Expect = 4e-11
Identities = 32/54 (59%), Positives = 33/54 (60%)
Frame = +2
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
G GG GGG+ GGG GG G GGG G F G R RGGRGG GGGG GG G
Sbjct: 128 GGGGGGGGGKGGGGGGGGGGGGGGGGGGGFFRGERXXGRGGRGGGGGGGGGGGG 289
Score = 65.9 bits (159), Expect = 6e-11
Identities = 36/68 (52%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Frame = +3
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRF-------GSGGRGGDRGGRGGRGGGGRGGR 647
G GG GGGR GGG GG G GGG G F G GG GG GG GG GGGG G
Sbjct: 129 GGGGGGGGGRGGGGGGGGGGGGGGGGGGGFLGGREXXGGGGEGGGGGGGGGGGGGGGXGG 308
Query: 648 GTPLRAEG 655
G R EG
Sbjct: 309 GGGGRGEG 332
Score = 65.5 bits (158), Expect = 7e-11
Identities = 32/54 (59%), Positives = 32/54 (59%)
Frame = +3
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
G GG GGG GGG GGR G GGG G G GG GG GGR GGGG GG G
Sbjct: 105 GGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGFLGGREXXGGGGEGGGG 266
Score = 65.1 bits (157), Expect = 1e-10
Identities = 34/60 (56%), Positives = 35/60 (57%), Gaps = 2/60 (3%)
Frame = +2
Query: 591 RDNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGG--RGGDRGGRGGRGGGGRGGRG 648
R G GG GGG GGG+GG G GGG G G GG RG GRGGRGGGG GG G
Sbjct: 101 RGGGGGGGGGGGGGGGGGKGGGGGGGGGGGGGGGGGGGFFRGERXXGRGGRGGGGGGGGG 280
Score = 65.1 bits (157), Expect = 1e-10
Identities = 32/54 (59%), Positives = 32/54 (59%)
Frame = +2
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
G GG GGG GGG GG G GGG G G GG GG GG GG GGGG GG G
Sbjct: 44 GGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGKGGGGGGGGGGGGGGGG 205
Score = 64.3 bits (155), Expect = 2e-10
Identities = 35/62 (56%), Positives = 36/62 (57%), Gaps = 8/62 (12%)
Frame = +2
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGG--------GRGG 646
G GG GGGR GGG GG G GGG G+ G GG GG GG GG GGG GRGG
Sbjct: 74 GGGGGGGGGRGGGGGGGG-GGGGGGGGGKGGGGGGGGGGGGGGGGGGGFFRGERXXGRGG 250
Query: 647 RG 648
RG
Sbjct: 251 RG 256
Score = 63.5 bits (153), Expect = 3e-10
Identities = 33/59 (55%), Positives = 34/59 (56%), Gaps = 1/59 (1%)
Frame = +3
Query: 591 RDNQGSGGRSGGGRSG-GGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
R+ G GG GGG G GG GG G GGGRG G GG GG GG GG GGGR G G
Sbjct: 228 REXXGGGGEGGGGGGGGGGGGGGGXGGGGGGRGEGGGGGGGGGGGGGGGGEGGGRRGGG 404
Score = 62.4 bits (150), Expect = 6e-10
Identities = 33/58 (56%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 595 GSGGRSGGGRSGGGRGGRFDSGR----GGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
G GG GGG GGG GG F GR GGG G G GG GG GG G GGGGRG G
Sbjct: 162 GGGGGGGGGGGGGGGGGGFLGGREXXGGGGEGGGGGGGGGGGGGGGXGGGGGGRGEGG 335
Score = 62.0 bits (149), Expect = 8e-10
Identities = 32/55 (58%), Positives = 33/55 (59%)
Frame = +3
Query: 594 QGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
+G G GGG GGG GG G GGG G G GG GG GG GG GGGGRGG G
Sbjct: 9 RGLPGGGGGGGGGGGGGGGGGGGGGGGEGG-GGGGGGGGGGGGGGGGGGGRGGGG 170
Score = 62.0 bits (149), Expect = 8e-10
Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Frame = +1
Query: 595 GSGGRSGGGRSGGGRGGRFDSG--------RGGGRGRFGSGGRGGDR---GGRGGRGGGG 643
G GG GGG GGG GG F G RGGG G G GG GG GG GGRGGGG
Sbjct: 163 GGGGGGGGGGGGGGGGGVF*GGERXREGGERGGGGGGGGGGGGGGGXGGGGGGGGRGGGG 342
Query: 644 RGGRGTPLRAEGKK 657
GG G EG++
Sbjct: 343 GGGGGGGGGGEGRE 384
Score = 61.6 bits (148), Expect = 1e-09
Identities = 33/67 (49%), Positives = 35/67 (51%), Gaps = 9/67 (13%)
Frame = +1
Query: 591 RDNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGG---------DRGGRGGRGG 641
R +G GG GGG GGG GG G GGG G G GG GG + G RGG GG
Sbjct: 91 RGGEGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGVF*GGERXREGGERGGGGG 270
Query: 642 GGRGGRG 648
GG GG G
Sbjct: 271 GGGGGGG 291
Score = 60.8 bits (146), Expect = 2e-09
Identities = 30/56 (53%), Positives = 31/56 (54%)
Frame = +1
Query: 591 RDNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGG 646
R+ GG GGG GGG GG G GGGRG G GG GG GG G GGG GG
Sbjct: 238 REGGERGGGGGGGGGGGGGGGXGGGGGGGGRGGGGGGGGGGGGGGEGREEGGGGGG 405
Score = 60.8 bits (146), Expect = 2e-09
Identities = 32/54 (59%), Positives = 32/54 (59%)
Frame = +3
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
G G GGG GGG GG G GGG G G GG GG GG GG GGGG GGRG
Sbjct: 3 GGRGLPGGGGGGGGGGGGGGGGGGGGGGGEGGGG-GGGGGGGGGGGGGGGGGRG 161
Score = 59.3 bits (142), Expect = 5e-09
Identities = 35/60 (58%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 591 RDNQGSGGRSGGGRSGGGRGGRFDSGR--GGGRGRFGSGGRGGDRGGRGGRGGGGRGGRG 648
R G GG GGG GGG GG F GR GG G G GG GG GG GG GGGG GGRG
Sbjct: 156 RGGGGGGGGGGGG--GGGGGGGFLGGREXXGGGGEGGGGGGGGGGGGGGGXGGGG-GGRG 326
Score = 58.5 bits (140), Expect = 9e-09
Identities = 33/64 (51%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 595 GSGGRSGGGRSG-GGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRGTPLRA 653
G GG GGGR G GG GG G GGG G G GG GG GG GG GGGG G R
Sbjct: 64 GGGGGGGGGRGGEGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGVF*GGERXRE 243
Query: 654 EGKK 657
G++
Sbjct: 244 GGER 255
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/63 (55%), Positives = 36/63 (56%), Gaps = 3/63 (4%)
Frame = +3
Query: 597 GGRS--GGGRSGGGRGGRFDSGRGGGRGRFGSGGRG-GDRGGRGGRGGGGRGGRGTPLRA 653
GGR GGG GGG GG G GGG G G GGRG G GG GG GGGG GG G R
Sbjct: 222 GGREXXGGGGEGGGGGGGGGGGGGGGXGG-GGGGRGEGGGGGGGGGGGGGGGGEGGGRRG 398
Query: 654 EGK 656
G+
Sbjct: 399 GGE 407
Score = 57.8 bits (138), Expect = 2e-08
Identities = 36/74 (48%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
Frame = +2
Query: 595 GSGGRSGGGRSGG--------GRGGRFDSGRGGGRGRFGSGGRGGDRG-----GRGGRGG 641
G GG GGG GG GRGGR G GGG G G GG GG G G GG GG
Sbjct: 176 GGGGGGGGGGGGGFFRGERXXGRGGRGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGG 355
Query: 642 GGRGGRGTPLRAEG 655
GG GG R EG
Sbjct: 356 GGGGGGRGGRREEG 397
Score = 55.1 bits (131), Expect = 1e-07
Identities = 32/57 (56%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 601 GGGR--SGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRGTPLRAEG 655
GGG GGG GG G GGG G G GG GG RGG GG GGGG GG G EG
Sbjct: 1 GGGEVCPGGGGGG----GGGGGGGGGGGGGGGGGRGGEGGGGGGGGGGGGGGGGGEG 159
>TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)
Length = 1005
Score = 70.1 bits (170), Expect = 3e-12
Identities = 71/266 (26%), Positives = 110/266 (40%), Gaps = 11/266 (4%)
Frame = +3
Query: 33 EDEVEKQVSAKKQKIAEVAAKQKKETKLQKVK-KESSSDDDSSSEDEKPAPKVAPLKTSV 91
+D EK+ KK+K + + +T ++KVK KE+ +DD +++K K
Sbjct: 6 DDGEEKKEKDKKEKKKKENKDKGDKTDVEKVKGKENDGEDDEEKKEKKKKEK------KD 167
Query: 92 KNGTTPAKKAKPAPSSSSSDEDSSDEEEEVIAKKPTKVVVPK---KEESSSDEDSSSDED 148
K+G T A+K K D+ DEE++ KK K+ K KE+ DE + +D
Sbjct: 168 KDGKTDAEKIK-----KKEDDGKDDEEKKEKKKKYDKIDAXKVKGKEDDGKDEGNKEKKD 332
Query: 149 SSSESDD--EKPAAKVAVPAKKAPAKNGSVTAPAKKAQPAPSSSSESEDDDSSEEDEPSA 206
D EK K KK K+ K + + E EDD+ +++ +
Sbjct: 333 KEKGDGDGEEKKEKKDKEKEKKKEKKDKDEETDTLKEK---GKNDEGEDDEGNKKKKKDK 503
Query: 207 KQPKKEVAVKPAVQKKKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVKNGAADSDSSD 266
K+ +K+ KKE+ D E ED K V+VS + K G + D
Sbjct: 504 KEKEKD--------HKKEK--KDKEEGEKEDSK--VEVSVRDIDIEEIKKEGEKEDKGKD 647
Query: 267 -----SDSSSDEDDDKKKPATKVAKK 287
+ ED DKK+ KV K
Sbjct: 648 GGKEVKEKKKKEDKDKKEKKKKVTGK 725
Score = 61.2 bits (147), Expect = 1e-09
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 9/227 (3%)
Frame = +3
Query: 220 QKKKEESSSDDSSSESEDEKPAVKVSAPSKVVPAAVKNGAADSDSSDSDSSSDEDDDKKK 279
++KKE+ + E++D+ V V +G D + + +D D K
Sbjct: 15 EEKKEKDKKEKKKKENKDKGDKTDVEK----VKGKENDGEDDEEKKEKKKKEKKDKDGKT 182
Query: 280 PATKVAKKLPAAAPIKKVEKSESSDDESSESSDEENDSKPATTTVAKPSAVKKSASSDSD 339
A K+ KK + + DDE + ++ D A K K + +
Sbjct: 183 DAEKIKKK-----------EDDGKDDEEKKEKKKKYDKIDAXKVKGKEDDGKDEGNKEKK 329
Query: 340 DEDSSDSDSEVKKDKMDVDESDSSEDSDEEDEKSTKTPQKKVKDVEMVDASSGKNAPKTP 399
D++ D D E KK+K D ++ E D+++E T T ++K K+ E D K K
Sbjct: 330 DKEKGDGDGEEKKEKKDKEKEKKKEKKDKDEE--TDTLKEKGKNDEGEDDEGNKKKKKDK 503
Query: 400 AAQTEN---------EGSKTLFVGNLSFSVQRSDVENFFKDCGEVVD 437
+ ++ EG K + SV+ D+E K+ GE D
Sbjct: 504 KEKEKDHKKEKKDKEEGEKE--DSKVEVSVRDIDIEEIKKE-GEKED 635
Score = 45.8 bits (107), Expect = 6e-05
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 4/148 (2%)
Frame = +3
Query: 268 DSSSDEDDDKKKPATKVAKKLPAAAPIKKVEKSESS---DDESSESSDEENDSKPATTTV 324
D ++ DKK+ K K ++KV+ E+ D+E E +E K T
Sbjct: 9 DGEEKKEKDKKEKKKKENKDKGDKTDVEKVKGKENDGEDDEEKKEKKKKEKKDKDGKTDA 188
Query: 325 AKPSAVKKSASSDSDDEDSSDSDSEVKKDKMDVDESDSSE-DSDEEDEKSTKTPQKKVKD 383
K +KK DDE+ + + K DK+D + E D +E K K +K D
Sbjct: 189 EK---IKKKEDDGKDDEEK--KEKKKKYDKIDAXKVKGKEDDGKDEGNKEKKDKEKGDGD 353
Query: 384 VEMVDASSGKNAPKTPAAQTENEGSKTL 411
E K K + ++E + TL
Sbjct: 354 GEEKKEKKDKEKEKKKEKKDKDEETDTL 437
>TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(70%)
Length = 2075
Score = 68.2 bits (165), Expect = 1e-11
Identities = 77/367 (20%), Positives = 144/367 (38%), Gaps = 12/367 (3%)
Frame = +2
Query: 277 KKKPATKVAKKLPAAAPIKKVEKSESSDDESSESSDEENDSKPATTTVAKPSAVKKSASS 336
K+K A K L P+K+ + + + E +EE + + V +
Sbjct: 38 KRKVAPK--SSLSTEPPLKQQQPKPENPPQEYEEVEEEVEEEEVEEEV-------EEEEE 190
Query: 337 DSDDEDSSDSDSEVKKDKMDVDESDSSEDSDEEDEKSTKTPQKKVKD--VEMVDASSGKN 394
+ ++++ + + E ++++ DV + + DE+D +K + KD + ++ ++ K+
Sbjct: 191 EEEEDEEEEEEEEEEEEENDVVKQQQQQQQDEDDIPISKLLEPLGKDQLLNLLCDAAAKH 370
Query: 395 APKTPAAQTENEGS---KTLFVGNLSFSVQRSDVENFFKDCGEVVDVRLATDE-DGRFKG 450
+ +G + +FV L + + + F+ GE+ D + TD+ G+ KG
Sbjct: 371 RDVEERIRKAADGDPVHRKIFVHGLGWDTTAGTLISAFRQYGEIEDCKAVTDKVSGKSKG 550
Query: 451 FGHVEFATAAAAQSALEYNGSELLQRPVRLDLAR----ERGAYTPNSGAANNSFQKGGRG 506
+G + F T AQ+AL+ ++ R LA TP + +A S
Sbjct: 551 YGFILFKTRRGAQNALKEPQKKIGNRMTACQLASIGPVSNPPPTPMAPSAAPSSSVSEYT 730
Query: 507 QSQTVFVRGFDKFQGEDDIKSSLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNS 566
Q + ++V G D L F GEI + D +G KGF + + S
Sbjct: 731 QKK-IYVSNV----GADLDPQKLLAFFSRFGEIEEGPLGLDKATGKPKGFCLFVYRNPES 895
Query: 567 VNKALELHDSDLGGFTLAVDEA--KPRDNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRF 624
+ALE D G L +A P+ + + G + + +F G
Sbjct: 896 ARRALEEPHKDFEGHILHCQKAIDGPKAGKFQQQQQHGNVNAHAQRAQFQRNSNVGANAA 1075
Query: 625 GSGGRGG 631
G GG
Sbjct: 1076AGYGGGG 1096
Score = 34.7 bits (78), Expect = 0.14
Identities = 24/121 (19%), Positives = 47/121 (38%)
Frame = +2
Query: 61 QKVKKESSSDDDSSSEDEKPAPKVAPLKTSVKNGTTPAKKAKPAPSSSSSDEDSSDEEEE 120
+KV +SS + + ++P P+ P + ++ + +E+ +EEEE
Sbjct: 41 RKVAPKSSLSTEPPLKQQQPKPENPPQEYEEVEEEVEEEEVEEEVEEEEEEEEEDEEEEE 220
Query: 121 VIAKKPTKVVVPKKEESSSDEDSSSDEDSSSESDDEKPAAKVAVPAKKAPAKNGSVTAPA 180
++EE + D + + +D+ P +K+ P K N A A
Sbjct: 221 ------------EEEEEEEENDVVKQQQQQQQDEDDIPISKLLEPLGKDQLLNLLCDAAA 364
Query: 181 K 181
K
Sbjct: 365 K 367
Score = 34.3 bits (77), Expect = 0.18
Identities = 28/58 (48%), Positives = 30/58 (51%)
Frame = +1
Query: 604 RSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRGTPLRAEGKKTTFA 661
RS G GR RG GRGR GR RGGRG RGGG R R R ++TT A
Sbjct: 130 RSRRGS*GR----RGRGRGR---RGRRRRRGGRGRRGGGRRRRR----RKRRRQTTAA 270
>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (11%)
Length = 678
Score = 67.4 bits (163), Expect = 2e-11
Identities = 50/124 (40%), Positives = 56/124 (44%)
Frame = -3
Query: 525 IKSSLQEHFGSCGEITRISVPKDFESGNVKGFAYLDFSDTNSVNKALELHDSDLGGFTLA 584
++SS FGS G TR S GN S N A D GG
Sbjct: 526 LRSSRSGRFGSRGGGTRYSPGPFGGIGNGGSGGGGGASGGNGGGGASGGGDGRFGG---- 359
Query: 585 VDEAKPRDNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGR 644
+G GG+ GGG GG+GG DSG GGG+G G GG GG GG GG GGGG
Sbjct: 358 ---------EGDGGKGGGG--DGGKGGGVDSGIGGGKGGGGDGGNGG--GGDGGNGGGGD 218
Query: 645 GGRG 648
GG G
Sbjct: 217 GGNG 206
Score = 48.1 bits (113), Expect = 1e-05
Identities = 30/59 (50%), Positives = 32/59 (53%), Gaps = 2/59 (3%)
Frame = -3
Query: 592 DNQGSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGR--GGRG 648
D+ GG+ GGG G G GG D G GGG G GG GG GG G GGGG GG G
Sbjct: 304 DSGIGGGKGGGGDGGNGGGG--DGGNGGG----GDGGNGG--GGASGIGGGGHSLGGGG 152
Score = 46.2 bits (108), Expect = 5e-05
Identities = 28/63 (44%), Positives = 30/63 (47%)
Frame = -3
Query: 595 GSGGRSGGGRSGGGRGGRFDSGRGGGRGRFGSGGRGGDRGGRGGRGGGGRGGRGTPLRAE 654
G+GG GGG + GG GG GGG GRFG G GG GG G G G G
Sbjct: 448 GNGGSGGGGGASGGNGG--GGASGGGDGRFGGEGDGGKGGG-----GDGGKGGGVDSGIG 290
Query: 655 GKK 657
G K
Sbjct: 289 GGK 281
>TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, complete
Length = 1145
Score = 67.4 bits (163), Expect = 2e-11
Identities = 39/96 (40%), Positives = 49/96 (50%), Gaps = 1/96 (1%)
Frame = -3
Query: 561 FSDTNSVNKAL-ELHDSDLGGFTLAVDEAKPRDNQGSGGRSGGGRSGGGRGGRFDSGRGG 619
F+ S+ A+ ++ +L G + V+EA+ R G GG G R GGG GGR G GG
Sbjct: 486 FASEQSMKDAIGAMNGQNLDGRNITVNEAQSRGGGGGGGGGGYNRGGGGYGGRSGGGGGG 307
Query: 620 GRGRFGSGGRGGDRGGRGGRGGGGRGGRGTPLRAEG 655
G R GG GG GG GG G GG RG +G
Sbjct: 306 GGYRSRDGGYGGGYGGGGGGGYGGGRDRGYSRGGDG 199
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.298 0.120 0.311
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,176,882
Number of Sequences: 63676
Number of extensions: 286373
Number of successful extensions: 13631
Number of sequences better than 10.0: 1363
Number of HSP's better than 10.0 without gapping: 4888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9182
length of query: 664
length of database: 12,639,632
effective HSP length: 103
effective length of query: 561
effective length of database: 6,081,004
effective search space: 3411443244
effective search space used: 3411443244
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0135.11