BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0101.7
(629 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC211136 UP|Q84VI3 (Q84VI3) Envelope-like protein (Fragment), co... 380 e-105
TC220238 UP|Q84VH5 (Q84VH5) Envelope-like protein (Fragment), co... 379 e-105
TC220237 UP|O64406 (O64406) Envelope-like (Fragment), complete 356 2e-98
TC205608 47 3e-05
TC218783 similar to UP|Q40363 (Q40363) NuM1 protein, partial (19%) 45 1e-04
TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 44 2e-04
TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 43 5e-04
TC216648 weakly similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, pa... 42 6e-04
TC205609 42 0.001
TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (... 41 0.001
BI424681 homologue to GP|17016848|gb| wsv453 {shrimp white spot ... 37 0.020
TC216566 similar to UP|Q8S9A1 (Q8S9A1) Glucosyltransferase-8 (Fr... 37 0.026
TC219508 homologue to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deace... 37 0.035
TC215140 similar to GB|AAL32703.1|17065098|AY062625 nucleotide s... 36 0.045
TC218782 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone n... 36 0.045
TC229572 similar to UP|Q8RVV3 (Q8RVV3) Viroid RNA-binding protei... 36 0.045
AW396581 36 0.059
TC228716 weakly similar to UP|O04390 (O04390) Nuclear matrix con... 35 0.077
CF922863 35 0.077
CO983030 35 0.10
>TC211136 UP|Q84VI3 (Q84VI3) Envelope-like protein (Fragment), complete
Length = 2043
Score = 380 bits (975), Expect = e-105
Identities = 231/621 (37%), Positives = 346/621 (55%), Gaps = 7/621 (1%)
Frame = +1
Query: 15 IERTAKGVKCMGLKSDPSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVP 74
+ R +GVK S + P V + KK RS + S +K++ P
Sbjct: 337 VPRRPQGVKIAENPSPATSPREVDTEMDKKIRS------IVSSILKDASVPEA------- 477
Query: 75 DEEEINDEDSPVKSPPDV-VPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNIS 133
DED P S P+V VPDV DV T+ + + A +P ++ ++ E+ A
Sbjct: 478 ------DEDVPTSSNPNVSVPDVKKDVPTSSAPNAEALPSPSEEGSTEEDDQAA------ 621
Query: 134 VSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAARM---KK 190
E P AP + ++ + SD+ P+ A +A R+ K
Sbjct: 622 --------------EETPAPRAPEPAPGDLIDLEEVESDEEPIANRLAPGIAERLQSRKG 759
Query: 191 KRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVEDSES 250
K + T ++K KS+PIT + + S K KKRK + DS+
Sbjct: 760 KTPIKRSGRIKTMAQK-KSTPITPATSRRS----------KVAIPSKKRKE-ISSSDSDK 903
Query: 251 DVEVGVQDIRSSDKKKFSGKRVPQNVPAVPIDRVSFHLEENVQKWKFVCKRRMAKERDVG 310
DVE+ D+ +S K K SGK+VP NVP P+D +SFH NV+KWK+V +RR+A ER++G
Sbjct: 904 DVEL---DVSTSKKAKTSGKKVPGNVPDAPLDNISFHSIGNVEKWKYVYQRRLAVERELG 1074
Query: 311 SDVLECRDVIALIEKAGLMKTIQNVGRCYERLVREFLVNLSVDVRRPDSAEFRKVYVRAE 370
D L+C++++ LI+ AGL+KT+ +G CYE LVREF+VN+ D+ S E++KV+VR +
Sbjct: 1075RDALDCKEIMDLIKAAGLLKTVSKLGDCYEGLVREFIVNIPSDISNRKSDEYQKVFVRGK 1254
Query: 371 CVVFSPAVINQALGRSAIAFVDEEVSMDVVAKELSAGYVKKWPSKKLLSTGNLSVKYAIL 430
CV FSPAVIN+ LGR +D +VS +AKE++A V+ WP K LS G LSVKYAIL
Sbjct: 1255CVKFSPAVINKYLGRPTDGVIDIDVSEHQIAKEITAKRVQHWPKKGKLSAGKLSVKYAIL 1434
Query: 431 NRIGAVNWVPTQHTSGVSATLAKLIYRIGKSIDFDFGTFVFEQTLKHADTCAVKLPVSFP 490
+RIGA NWVPT HTS V+ L K +Y +G F+FG ++F+QT+KH+++ A+KLP++FP
Sbjct: 1435HRIGAANWVPTNHTSTVATGLGKFLYAVGTKSKFNFGNYIFDQTVKHSESFAIKLPIAFP 1614
Query: 491 SLLTEIILKQHPQILRADDVAMSCGVPITLDQRLFMEPHVLDIALPTSRTSASPVTESGT 550
++L I+L QHP +L D M P++L +LF HV DI + TS +++ SG
Sbjct: 1615TVLCGIMLSQHPNMLNYTDSVMKRESPLSLHYKLFEGTHVPDI-VSTSVSTSGKAAASGA 1791
Query: 551 ---QAIIAELQEVSKALQETIRVSTARKLKVDALLLKLQEEERREGDQSAAAPNVCNEEE 607
A+IAEL++ K L+ TI+ +T +K++++ L+ +L E + + + EEE
Sbjct: 1792VSKDALIAELKDTCKVLEATIKATTEKKMELELLIKRLSESGIDDEEAAEEEGEAAEEEE 1971
Query: 608 EGSEECAEESAEGSGKDCSSE 628
E +EE E++AE + D SE
Sbjct: 1972EAAEE-EEDAAEETESDDDSE 2031
>TC220238 UP|Q84VH5 (Q84VH5) Envelope-like protein (Fragment), complete
Length = 2128
Score = 379 bits (974), Expect = e-105
Identities = 231/606 (38%), Positives = 337/606 (55%), Gaps = 12/606 (1%)
Frame = +1
Query: 31 PSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVP-----ILEDV--PDEEEINDED 83
P V K+ K S NP+ +V + IL+DV PD D+D
Sbjct: 343 PVPEKLVPKRQQGVKISENPSLATSPREVDTEMDKKIRTIVSNILKDVSVPDA----DKD 510
Query: 84 SPVKSPPDV-VPDVVADVETTGSKGSSAQETPGK-DSTSHENSGDATTPNISVSSSSKDA 141
P S P+V VPD DV T+ + + +P K DST E+ TP
Sbjct: 511 VPTSSTPNVSVPDAEKDVPTSSTPNAEVLSSPSKEDSTEEEDQATEETPA---------- 660
Query: 142 DPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAARM---KKKRRVSSPE 198
P AP + ++ + SD+ P+ A +A R+ K K +
Sbjct: 661 -----------PRAPEPAPGDLIDLEEVESDEEPIANKLAPGIAERLQSRKGKTPIKRSG 807
Query: 199 VTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVEDSESDVEVGVQD 258
T ++K KS+PIT + + S K KKRK + DS+ DVE+ V D
Sbjct: 808 RIKTMAQK-KSTPITPTTSRRS----------KVAIPSKKRKE-ISSSDSDDDVELDVPD 951
Query: 259 IRSSDKKKFSGKRVPQNVPAVPIDRVSFHLEENVQKWKFVCKRRMAKERDVGSDVLECRD 318
I+ + K SGK+VP NVP P+D +SFH +NV++WKFV +RR+A ER++G D L+C++
Sbjct: 952 IK---RAKTSGKKVPGNVPDAPLDNISFHSIDNVERWKFVYQRRLALERELGRDALDCKE 1122
Query: 319 VIALIEKAGLMKTIQNVGRCYERLVREFLVNLSVDVRRPDSAEFRKVYVRAECVVFSPAV 378
++ LI+ AGL+KT+ +G CYE LVREF+VN+ D+ S E++KV+VR +CV FSPAV
Sbjct: 1123IMDLIKAAGLLKTVTKLGDCYESLVREFIVNIPSDITNRKSDEYQKVFVRGKCVRFSPAV 1302
Query: 379 INQALGRSAIAFVDEEVSMDVVAKELSAGYVKKWPSKKLLSTGNLSVKYAILNRIGAVNW 438
IN+ LGR VD VS +AKE++A V+ WP K LS G LSVKYAIL+RIGA NW
Sbjct: 1303INKYLGRPTDGVVDITVSEHQIAKEITAKQVQHWPKKGKLSAGKLSVKYAILHRIGAANW 1482
Query: 439 VPTQHTSGVSATLAKLIYRIGKSIDFDFGTFVFEQTLKHADTCAVKLPVSFPSLLTEIIL 498
VPT HTS V+ L K +Y +G F+FG ++F+QT+KH+++ AVKLP++FP++L I+L
Sbjct: 1483VPTNHTSTVATGLGKFLYAVGTKSKFNFGNYIFDQTVKHSESFAVKLPIAFPTVLCGIML 1662
Query: 499 KQHPQILRADDVAMSCGVPITLDQRLFMEPHVLDIALPTSRTSASPVTESGTQAIIAELQ 558
QHP +L D M P++L +LF HV DI + + +AS A+IAEL+
Sbjct: 1663SQHPNMLNYTDSVMKRESPLSLHYKLFEGTHVPDIVSTSGKAAASGAVSK--DALIAELK 1836
Query: 559 EVSKALQETIRVSTARKLKVDALLLKLQEEERREGDQSAAAPNVCNEEEEGSEECAEESA 618
+ K L+ TI+ +T +K++++ L+ +L E +G+ + EEEE +EE E++A
Sbjct: 1837DTCKVLEATIKATTEKKMELERLIKRLSESGIDDGEAAEEEEEAAEEEEEAAEE-EEDAA 2013
Query: 619 EGSGKD 624
E + D
Sbjct: 2014EDTEPD 2031
>TC220237 UP|O64406 (O64406) Envelope-like (Fragment), complete
Length = 1974
Score = 356 bits (913), Expect = 2e-98
Identities = 219/603 (36%), Positives = 332/603 (54%), Gaps = 10/603 (1%)
Frame = +1
Query: 20 KGVKCMGLKSDPSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVPDEEE- 78
K G S PS PSS +++++ P + Q+ +AP L VP ++
Sbjct: 208 KDTSSPGSPSVPSSPSSTKAPSNQEQ----PEFHIQPIQMIPGQAPVPEKL--VPKRQQG 369
Query: 79 --INDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSS 136
I++ S SP +V ++ + + S P D +S TPN V S
Sbjct: 370 VKISENPSIATSPREVDTEMDKKIRSIVSSILKNASVPDADKDVPTSS----TPNAEVLS 537
Query: 137 SSKDADPKNGNSEGTNS----EEPNQAPASVQNISDDASDDVPLTESFADSVAARM---K 189
SS + + T P AP + ++ + SD+ P+ A +A R+ K
Sbjct: 538 SSSKEESTEEEEQATEETPAPRAPEPAPGDLIDLEEVESDEEPIANKLAPGIAERLQSRK 717
Query: 190 KKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVEDSE 249
K ++ T ++K KS+PIT + + S K KKRK DS+
Sbjct: 718 GKTPITRSGRIKTMAQK-KSTPITPTTSRWS----------KVAIPSKKRKE-FSSSDSD 861
Query: 250 SDVEVGVQDIRSSDKKKFSGKRVPQNVPAVPIDRVSFHLEENVQKWKFVCKRRMAKERDV 309
DVE+ V DI+ + K SGK+VP NVP P+D +SFH NV++WKFV +RR+A ER++
Sbjct: 862 DDVELDVPDIKRAKK---SGKKVPGNVPDAPLDNISFHSIGNVERWKFVYQRRLALEREL 1032
Query: 310 GSDVLECRDVIALIEKAGLMKTIQNVGRCYERLVREFLVNLSVDVRRPDSAEFRKVYVRA 369
G D L+C++++ LI+ AGL+KT+ +G CYE LVREF+VN+ D+ S E++KV+VR
Sbjct: 1033GRDALDCKEIMDLIKAAGLLKTVTKLGDCYESLVREFIVNIPSDITNRKSDEYQKVFVRG 1212
Query: 370 ECVVFSPAVINQALGRSAIAFVDEEVSMDVVAKELSAGYVKKWPSKKLLSTGNLSVKYAI 429
+CV FSPAVIN+ LGR VD VS +AKE++A V+ WP K LS G LSVKYAI
Sbjct: 1213KCVRFSPAVINKYLGRPTEGVVDIAVSEHQIAKEITAKQVQHWPKKGKLSAGKLSVKYAI 1392
Query: 430 LNRIGAVNWVPTQHTSGVSATLAKLIYRIGKSIDFDFGTFVFEQTLKHADTCAVKLPVSF 489
L+RIG NWVPT HTS V+ L K +Y +G F+FG ++F+QT+KH+++ AVKLP++F
Sbjct: 1393LHRIGTANWVPTNHTSTVATGLGKFLYAVGTKSKFNFGNYIFDQTVKHSESFAVKLPIAF 1572
Query: 490 PSLLTEIILKQHPQILRADDVAMSCGVPITLDQRLFMEPHVLDIALPTSRTSASPVTESG 549
P++L I+L QHP IL D ++L +LF HV DI + + +AS
Sbjct: 1573PTVLCGIMLSQHPNILNNIDSVKKRESALSLHYKLFEGTHVPDIVSTSGKAAASGAVTK- 1749
Query: 550 TQAIIAELQEVSKALQETIRVSTARKLKVDALLLKLQEEERREGDQSAAAPNVCNEEEEG 609
A+IAEL++ K L+ TI+ +T +K++++ L+ +L + +G+ + EE++
Sbjct: 1750-DALIAELKDTCKVLEATIKATTEKKMELERLIKRLSDSGIDDGEAAEEEEEAAEEEKDA 1926
Query: 610 SEE 612
+E+
Sbjct: 1927AED 1935
>TC205608
Length = 940
Score = 46.6 bits (109), Expect = 3e-05
Identities = 46/172 (26%), Positives = 74/172 (42%), Gaps = 4/172 (2%)
Frame = +1
Query: 105 SKGSSAQETP-GKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASV 163
SKG+S + + KD ++S + V+ SKD+ PKNG+S+ A +
Sbjct: 118 SKGASTKSSQKSKDGNKSKDSKANSKSEDGVNRKSKDSTPKNGSSKSI------VAAKKM 279
Query: 164 QNISDDASDDVPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKS 223
N S + +D +ES D +K+K TP S K + +P S+ VKS
Sbjct: 280 SNKSKN-TDTSKTSESKDDG---SIKQKPSAKFKHETPKSGKSKQETPKAAISKGKPVKS 447
Query: 224 KGKQKEDKTPTEKKKRKTPVDVEDSESDVEVGVQDI---RSSDKKKFSGKRV 272
GK + T + D E+ SDV G ++ +S++ K G +
Sbjct: 448 GGKTDVNGTSKARSGLLKRKDSENENSDVSAGEREDAKGKSANSSKAKGSEL 603
>TC218783 similar to UP|Q40363 (Q40363) NuM1 protein, partial (19%)
Length = 870
Score = 44.7 bits (104), Expect = 1e-04
Identities = 53/242 (21%), Positives = 94/242 (37%), Gaps = 27/242 (11%)
Frame = +3
Query: 29 SDPSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVPDEEEINDEDSPVKS 88
S+ +P++ SK + ++N T + K + + + + D+ DE K
Sbjct: 96 SEDEKPAAKVAVPSKNQSAKNGTLSTLAKKGKPAASSSS---SESSDDNSDEDEAPKTKV 266
Query: 89 PPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGD-----ATTPNISVSSSSKDADP 143
P + A + T SS ++ DS+S E A P + V+ + K
Sbjct: 267 APAAGKNGHASTKKTQPSESSDSDSSDSDSSSDEGKSKKKPTTAKLPTLPVAPAKKVESS 446
Query: 144 KNGNSEGTNSEEPNQAPASVQNIS----------------DDASD------DVPLTESFA 181
+ +SE +S+E N A +V +S D +SD D+ + +
Sbjct: 447 DDESSE--SSDEDNDAKPAVTAVSKPSARAQKKVESSDSDDSSSDEDKGKMDIDDDDDSS 620
Query: 182 DSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKT 241
D KKK +S E + +S + S+ S+ + + + D +EKK KT
Sbjct: 621 DESEEPQKKKAVKNSKESSDSSEEDSEDESEEKPSKTPQKRGRDVEMVDAALSEKKAPKT 800
Query: 242 PV 243
PV
Sbjct: 801 PV 806
Score = 41.6 bits (96), Expect = 0.001
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 2/137 (1%)
Frame = +3
Query: 116 KDSTSHENSGDATT--PNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDD 173
++S+S ++S D+ P V+ SK+ KNG + A +S SDD SD+
Sbjct: 63 EESSSDDSSSDSEDEKPAAKVAVPSKNQSAKNGTLSTLAKKGKPAASSSSSESSDDNSDE 242
Query: 174 VPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTP 233
E+ VA K S+ + P+ S S SS S + KSK K K P
Sbjct: 243 ---DEAPKTKVAPAAGKNGHASTKKTQPSESSDSDSSDSDSSSDEG--KSKKKPTTAKLP 407
Query: 234 TEKKKRKTPVDVEDSES 250
T V+ D ES
Sbjct: 408 TLPVAPAKKVESSDDES 458
>TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (24%)
Length = 808
Score = 43.9 bits (102), Expect = 2e-04
Identities = 38/148 (25%), Positives = 61/148 (40%), Gaps = 9/148 (6%)
Frame = +1
Query: 104 GSKGSSAQETPGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSE------GTNSEEPN 157
G + A+E +S A+ + + KD + + + G++ EE
Sbjct: 61 GKPETKAEELKVPESKKAVAKASASAKQVKIVEPKKDNEEDSDDDSDEDDDFGSSDEEME 240
Query: 158 QAPASVQNISDDASDDVPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSS---PITY 214
A + + SDD DD E+ + A + KKR S TP SSKK+K++
Sbjct: 241 DADSDSDDESDDKEDDDE--ETHPKNKKADLGKKRPNESASKTPVSSKKAKNATPEKTDG 414
Query: 215 KSRQASVKSKGKQKEDKTPTEKKKRKTP 242
K + +K KTP+ + K KTP
Sbjct: 415 KKGGHTATPHPAKKGGKTPSSEAKAKTP 498
>TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (63%)
Length = 1144
Score = 42.7 bits (99), Expect = 5e-04
Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 8/179 (4%)
Frame = +3
Query: 72 DVPDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQETPGKDSTSHENSGDATTPN 131
D DE+E D D + P + + G + A++ +S +
Sbjct: 357 DNSDEDEFTDSDEDDEDVPLINTE-------NGKPETKAEDLKVPESKKAVAKASGSAKQ 515
Query: 132 ISVSSSSKDA-----DPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAA 186
+ V KD D + + G++ EE A + + S D DD D
Sbjct: 516 VKVVEPKKDNEEDSDDDSDDDDFGSSDEEMEDADSDSDDESGDEDDDEETPPKKVD---- 683
Query: 187 RMKKKRRVSSPEVTPTSSKKSKSS---PITYKSRQASVKSKGKQKEDKTPTEKKKRKTP 242
+ KKR S TP SSKK+K++ K + +K KTP + K KTP
Sbjct: 684 -LGKKRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPNSEAKAKTP 857
>TC216648 weakly similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, partial (41%)
Length = 2064
Score = 42.4 bits (98), Expect = 6e-04
Identities = 55/225 (24%), Positives = 84/225 (36%), Gaps = 20/225 (8%)
Frame = +1
Query: 66 NVPILEDVPDEEEINDEDSPVKSPPDVVPDVV-ADVETTGSK-----------GSSAQET 113
N+ I + +EE++ + P D++ AD E G K G ++ ET
Sbjct: 817 NIQINKTNMKKEELSAKLLEFLESPHATTDILLADKEQKGKKRTRKSVPSKSPGEASTET 996
Query: 114 PGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDD 173
P K SG SS D D K S+ + ++ A N SDD
Sbjct: 997 PAKKQKQTSQSGKKQK-----QSSDDDEDDKAELSDAKGVSQEDEDVAVPNNESDDE--- 1152
Query: 174 VPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVK------SKGKQ 227
ES ++ + K ++R TS K K S ++ R +SVK +K +
Sbjct: 1153 ----ESRSEEEEEKSKSRKR--------TSKKAVKESSVSKADRTSSVKKTPVKDAKSIE 1296
Query: 228 KEDKTPTEKK--KRKTPVDVEDSESDVEVGVQDIRSSDKKKFSGK 270
K K PT KK S+S + +S+K+ GK
Sbjct: 1297 KTKKKPTSKKGVAEHDSASASVSKSKQPASKKQKTASEKQDTKGK 1431
Score = 38.9 bits (89), Expect = 0.007
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 12/227 (5%)
Frame = +1
Query: 31 PSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKA-----PNVPILEDVPDEEEINDEDSP 85
P++ + ++ KK++ + + K+++ ++K +V + + D+EE E+
Sbjct: 997 PAKKQKQTSQSGKKQKQSSDDDEDDKAELSDAKGVSQEDEDVAVPNNESDDEESRSEEEE 1176
Query: 86 VKSPPDVVPDVVADVETTGSKG---SSAQETPGKDSTSHENSGDATTPNISVSSSSKDAD 142
KS A E++ SK SS ++TP KD+ S E + T V+
Sbjct: 1177 EKSKSRKRTSKKAVKESSVSKADRTSSVKKTPVKDAKSIEKTKKKPTSKKGVA------- 1335
Query: 143 PKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLTESFADSVAARMKKKRRVSSPEVTPT 202
E + A ASV AS KK++ S + T
Sbjct: 1336 ------------EHDSASASVSKSKQPAS-----------------KKQKTASEKQDT-- 1422
Query: 203 SSKKSKSSPITYKSRQASVKSKGKQKEDK----TPTEKKKRKTPVDV 245
K+ S T KS +A VK +GK K +K PT++ VD+
Sbjct: 1423 -KGKAASKKRTDKSSKALVKDQGKSKSNKKAKAEPTKQDMHAVVVDI 1560
>TC205609
Length = 1142
Score = 41.6 bits (96), Expect = 0.001
Identities = 46/173 (26%), Positives = 70/173 (39%), Gaps = 3/173 (1%)
Frame = +2
Query: 102 TTGSKGSSAQETP-GKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEP--NQ 158
+ GSKG+S + + KD + S + VS SKD PK+G+S+ + + N+
Sbjct: 83 SNGSKGASTKSSQKAKDGNKSKGSKANSKSEDKVSRKSKDGTPKSGSSKSIVAAKKMSNK 262
Query: 159 APASVQNISDDASDDVPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQ 218
+ + + ++ DD DS K K S T S K + +P S+
Sbjct: 263 LKNTDTSKTSESKDD--------DS----SKPKPSAKSKHETLKSGKSKQETPKAAISKG 406
Query: 219 ASVKSKGKQKEDKTPTEKKKRKTPVDVEDSESDVEVGVQDIRSSDKKKFSGKR 271
VKS GK + T K E+ SDV G +I S K S +
Sbjct: 407 KPVKSGGKTDVNGTGKVKSGLLKRKHFENENSDVSAG--EIEDSKGKTASSSK 559
>TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1),
partial (3%)
Length = 784
Score = 41.2 bits (95), Expect = 0.001
Identities = 58/225 (25%), Positives = 83/225 (36%), Gaps = 17/225 (7%)
Frame = +3
Query: 31 PSQPSSVSKKASKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVPDEEEINDEDSPVKSPP 90
P+ P S S +S S PT S AP + P + P S P
Sbjct: 132 PASPRSSSPPSSPPSPSTTPT----------SSAPG-----NAPHSSPSASKRRPTPSGP 266
Query: 91 DVVPDVVADVETTGSKGSSAQET---PGKD---STSHENSGDATTPNISVSSSSKDADPK 144
+T S+ + ++ P S S S PN S SS++ A P
Sbjct: 267 SSAASTSPKPTSTSSRAAPSKSPFTWPSASLGTSMSSPASPPPPAPNASTSSTTSAASPA 446
Query: 145 NGNSEGTNSEEPN--QAPASVQNISDDASDDVPLTESFADSVAARMKKKR-RVSSPEVTP 201
+S + P+ + + P + + S + KR RVSSP TP
Sbjct: 447 LASSAANTASATTAPSLPSIPSRTTPTTARSTPSSSNPTSSTSPTATPKRTRVSSP--TP 620
Query: 202 TSSKKSKSSPITYKSRQASVK-SKGKQKEDKTP-------TEKKK 238
+SS S+SSP + K A+V S + +E TP EKKK
Sbjct: 621 SSSSTSRSSPPSPKEPTATVTVSHTRGEEANTPQ*NKIYIKEKKK 755
Score = 35.8 bits (81), Expect = 0.059
Identities = 33/106 (31%), Positives = 52/106 (48%), Gaps = 1/106 (0%)
Frame = +3
Query: 112 ETPGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDAS 171
+TP + +T+ + +T P S SSS + P + ++ T+S AP + + S AS
Sbjct: 75 QTPTRTTTATRRTTTSTLPPASPRSSSPPSSPPSPSTTPTSS-----APGNAPHSSPSAS 239
Query: 172 DDVPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKS-SPITYKS 216
P T S S A+ +SP+ T TSS+ + S SP T+ S
Sbjct: 240 KRRP-TPSGPSSAAS--------TSPKPTSTSSRAAPSKSPFTWPS 350
>BI424681 homologue to GP|17016848|gb| wsv453 {shrimp white spot syndrome
virus} [Shrimp white spot syndrome virus], partial (11%)
Length = 460
Score = 37.4 bits (85), Expect = 0.020
Identities = 33/151 (21%), Positives = 59/151 (38%)
Frame = +3
Query: 114 PGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDD 173
P S + E + + PN + ++++ D D +N + G N EPNQ A + DD
Sbjct: 87 PKPSSMAEEAALEVVDPNTAAAAAAVDMDVENVEAGG-NGAEPNQKRAREEEEPQGGDDD 263
Query: 174 VPLTESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTP 233
V KK+RV + + SV+ + +K D+
Sbjct: 264 V--------------SKKQRVD-------------------EENEKSVEEQRLEKRDEQE 344
Query: 234 TEKKKRKTPVDVEDSESDVEVGVQDIRSSDK 264
EK + K + +++ V +G + SS +
Sbjct: 345 EEKGEEKEEEEEKEASGSVNLGFKSFGSSSE 437
>TC216566 similar to UP|Q8S9A1 (Q8S9A1) Glucosyltransferase-8 (Fragment),
partial (32%)
Length = 925
Score = 37.0 bits (84), Expect = 0.026
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Frame = +3
Query: 71 EDVPDEEEINDEDSPVKSPPDVVPDVVADVETTGSKGSSAQET----PGKDSTSHENSGD 126
ED+ D+++ + ED + D DV+AD E S+A PG S S+ +
Sbjct: 204 EDMDDDDDESQEDGDYEEEDD---DVLADDEENEPSPSTALAVTVAVPGS-SVSNGGAAP 371
Query: 127 ATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISD---DASDDVPLTESFADS 183
+TP + + +DPK E ++P P + + D++ L + F D
Sbjct: 372 ISTPTATTIVVANSSDPKRRRLEPVEEKKPPPTPDDSRRLFQRLWTDEDEIELLQGFLDY 551
Query: 184 VAAR 187
+ R
Sbjct: 552 TSQR 563
>TC219508 homologue to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (62%)
Length = 1291
Score = 36.6 bits (83), Expect = 0.035
Identities = 35/134 (26%), Positives = 55/134 (40%), Gaps = 6/134 (4%)
Frame = +1
Query: 115 GKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDV 174
G+D+ + P + + +K ADPK + ++ E + + S D DD
Sbjct: 454 GQDNDEGAKVTKPSKPVPKIGAPAKTADPKKDEGDDSDDESDDDLAGEDEFGSSDEMDDD 633
Query: 175 PLTESFADSVAARMK----KKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQK-E 229
++ +D K KKR S TP S+KK+K++ K+ GK+
Sbjct: 634 SDSDEESDEETPAKKVDQGKKRPNESAAKTPVSAKKAKTA--------TPEKTNGKKNVH 789
Query: 230 DKTP-TEKKKRKTP 242
TP KK KTP
Sbjct: 790 VATPHPSKKGGKTP 831
>TC215140 similar to GB|AAL32703.1|17065098|AY062625 nucleotide sugar
epimerase-like protein {Arabidopsis thaliana;} , partial
(91%)
Length = 1885
Score = 36.2 bits (82), Expect = 0.045
Identities = 25/107 (23%), Positives = 43/107 (39%)
Frame = +1
Query: 118 STSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPASVQNISDDASDDVPLT 177
S + SGD+T PN S + + P + + ++S P+ S Q A+ T
Sbjct: 97 SDTTATSGDSTAPNSSTPPPNSSSVPLS*SHSSSSSSSPSTTLPSPQTSPPTATSTPTPT 276
Query: 178 ESFADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSK 224
S + + + P PT+S S +P+ + A + SK
Sbjct: 277 SSPPPPPSPPGRSRSATPPPLAAPTASPSSSPAPLASSAATAPLPSK 417
>TC218782 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone na-481-5),
partial (20%)
Length = 925
Score = 36.2 bits (82), Expect = 0.045
Identities = 40/182 (21%), Positives = 69/182 (36%), Gaps = 1/182 (0%)
Frame = +1
Query: 42 SKKKRSRNPTCKVYKSQVKNSKAPNVPILEDVPDEEEINDEDSPVKSPPDVVPDVVADVE 101
SKK ++N + K KA + D E++ +DED +V +
Sbjct: 7 SKKTPTKNGNLS---TPAKKGKAASSSSSSD-SSEDDSSDED-----------EVATKKQ 141
Query: 102 TTGSKGSSAQETPGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAPA 161
T K +E D +S E+ + ++V ++ A KNG + A +
Sbjct: 142 TKEVKVQKGKEESSSDDSSSESEDEKPAAKVAVPPKNQSA--KNGTLSTPAEKGKPAASS 315
Query: 162 SVQNISDDASDDVPLTES-FADSVAARMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQAS 220
S SDD SD+ +S A + + +++ P + S S S K + A+
Sbjct: 316 SSSESSDDDSDEDEAPKSKVAPAAGKNVPASTKITQPSESSESDSDSSSDEDKNKKKPAT 495
Query: 221 VK 222
K
Sbjct: 496 AK 501
>TC229572 similar to UP|Q8RVV3 (Q8RVV3) Viroid RNA-binding protein
(Fragment), partial (16%)
Length = 868
Score = 36.2 bits (82), Expect = 0.045
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 61 NSKAPNVPILEDVPDEEEINDEDSPV--KSPPDVVP--DVVADVETTGSKGSSAQETPGK 116
+ K P+ P + E DED + + P + P ++ D + G SS+ + G
Sbjct: 40 SEKVDGGPVEVKKPKKVEAGDEDIDIGDEMPTSMFPPVEIEKDKDVVGGHASSSSSSSGS 219
Query: 117 DSTSHENSGDATTPNISVSSSSKDADPKNGNS 148
S+ +S D+ S SSS D++ NG+S
Sbjct: 220 SSSDSSSSSDSD----SGSSSGSDSEADNGHS 303
>AW396581
Length = 401
Score = 35.8 bits (81), Expect = 0.059
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = -1
Query: 222 KSKGKQKEDKTPTEKKKRKTPVDVEDSESDVEVGVQDIRSSDKKKFSGKRVPQNVPAVPI 281
K KGK+ ++K EKK + D E + + G + +KKK K+ + + +
Sbjct: 278 KVKGKEDKEKKKKEKKVKDDKTDAEKVKGKEDDGEDNEEKEEKKK---KKKKEKDDKIDV 108
Query: 282 DRVSFHLEENVQKWKFVCKRRMAKERDVGSDVLE 315
++V ++ + K K++ K++D +D L+
Sbjct: 107 EKVKGKEDDGEDEGKKEKKKKEKKDKDEETDTLK 6
>TC228716 weakly similar to UP|O04390 (O04390) Nuclear matrix constituent
protein 1 (NMCP1), partial (3%)
Length = 1500
Score = 35.4 bits (80), Expect = 0.077
Identities = 35/155 (22%), Positives = 58/155 (36%), Gaps = 5/155 (3%)
Frame = +2
Query: 101 ETTGSKGSSAQETPGKDSTSHENSGDATTPNISVSSSSKDADPKNGNSEGTNSEEPNQAP 160
E G G SA+ PG+ HEN S + +S+ P N +
Sbjct: 401 EARGILGESAEALPGESVDDHENEFPNGNAEDSANVNSESQKPSNRRIPANVRKRNRVQT 580
Query: 161 ASVQNISDDASDDVPLTESFADSVAARMKKKRR---VSSPEVTPTSSKKSKSSPI--TYK 215
+S +S D +E +DS+ +K+RR + P T S+ + P
Sbjct: 581 SSQMTVSGHGGD---ASEGHSDSLIPGQRKRRRQKAAAPPAQTAGESRYNLRRPKIGATT 751
Query: 216 SRQASVKSKGKQKEDKTPTEKKKRKTPVDVEDSES 250
S ++ GK+ + + K + VD + S S
Sbjct: 752 SSVRAMSGGGKESQGEVDRVKDTGEGIVDSKTSHS 856
>CF922863
Length = 392
Score = 35.4 bits (80), Expect = 0.077
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 186 ARMKKKRRVSSPEVTPTSSKKSKSSPIT---YKSRQASVKSKGKQKEDKTPTEKKKR 239
++ KKK+ P TP KK++ +P +K ++ K QKE KTP KKR
Sbjct: 37 SQKKKKKGGGLPSKTPPKKKKAQKNPTQVQHFKPKKKRKKPPRAQKEPKTPPPPKKR 207
>CO983030
Length = 505
Score = 35.0 bits (79), Expect = 0.10
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +3
Query: 187 RMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVE 246
+ KKK++ + KK K K ++ K K K+K+ K +KKK+K +
Sbjct: 93 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 272
Query: 247 DSESDVEVGVQDIRSSDKKK 266
+ + + I+ + KKK
Sbjct: 273 KKKKNKKKKXXKIKKTQKKK 332
Score = 33.5 bits (75), Expect = 0.29
Identities = 19/80 (23%), Positives = 37/80 (45%)
Frame = +2
Query: 187 RMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRKTPVDVE 246
+ KKK++ + KK K K ++ K K K+K+ K +KKK+K +
Sbjct: 95 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 274
Query: 247 DSESDVEVGVQDIRSSDKKK 266
+ + ++ +++ KKK
Sbjct: 275 KKKKQKKKKXKNKKNTKKKK 334
Score = 31.6 bits (70), Expect = 1.1
Identities = 16/54 (29%), Positives = 26/54 (47%)
Frame = +1
Query: 187 RMKKKRRVSSPEVTPTSSKKSKSSPITYKSRQASVKSKGKQKEDKTPTEKKKRK 240
+ KKK++ + KK K K ++ K K K+K+ K +KKK+K
Sbjct: 70 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 231
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.308 0.126 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,604,093
Number of Sequences: 63676
Number of extensions: 255837
Number of successful extensions: 1751
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 1658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of query: 629
length of database: 12,639,632
effective HSP length: 103
effective length of query: 526
effective length of database: 6,081,004
effective search space: 3198608104
effective search space used: 3198608104
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0101.7