BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0061.10
(276 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC217701 homologue to GB|AAL06971.1|15810091|AY056083 AT4g30260/... 399 e-111
TC217702 similar to GB|AAL06971.1|15810091|AY056083 AT4g30260/F9... 176 1e-44
BG238258 similar to GP|15010748|gb| AT4g30260/F9N11_110 {Arabido... 89 3e-18
BQ080437 homologue to GP|20197033|gb| expressed protein {Arabido... 79 2e-15
TC219140 similar to GB|AAO44047.1|28466877|BT004781 At2g39020 {A... 55 3e-08
TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein pr... 51 7e-07
TC204808 weakly similar to UP|HQGT_RAUSE (Q9AR73) Hydroquinone g... 50 9e-07
TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall pr... 50 9e-07
TC208362 weakly similar to UP|O64835 (O64835) Expressed protein ... 48 4e-06
TC208361 weakly similar to UP|O64835 (O64835) Expressed protein ... 48 6e-06
TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 48 6e-06
TC216000 similar to UP|O22253 (O22253) Photolyase/blue-light rec... 48 6e-06
TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell... 47 7e-06
TC228724 similar to UP|Q9FML2 (Q9FML2) Histone deacetylase, part... 47 7e-06
TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pr... 47 9e-06
TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {A... 47 1e-05
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 46 2e-05
TC228693 similar to UP|Q8S9A6 (Q8S9A6) Glucosyltransferase-3, pa... 46 2e-05
TC208857 weakly similar to UP|Q84KG8 (Q84KG8) Fatty acid delta-6... 46 2e-05
TC225560 similar to UP|Q9FUL8 (Q9FUL8) Arabinogalactan protein, ... 46 2e-05
>TC217701 homologue to GB|AAL06971.1|15810091|AY056083 AT4g30260/F9N11_110
{Arabidopsis thaliana;} , partial (68%)
Length = 878
Score = 399 bits (1024), Expect = e-111
Identities = 204/231 (88%), Positives = 213/231 (91%), Gaps = 1/231 (0%)
Frame = +3
Query: 47 TTSSPFINSNLPAPLP-PKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEP 105
T SPFI+ NLP P P PKSS+S ++PP+PPP RP I++SGFGPAPNTLTEP
Sbjct: 12 TAPSPFISYNLPPPPPLPKSSVS--------AVPPSPPPP-RPGIATSGFGPAPNTLTEP 164
Query: 106 VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKK 165
VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKK
Sbjct: 165 VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKK 344
Query: 166 SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIL 225
SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVI+
Sbjct: 345 SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIV 524
Query: 226 KVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
KVVVVCVTLAWSSWAAYPFMSSAV+PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 525 KVVVVCVTLAWSSWAAYPFMSSAVSPRRKALALYPVFLMYVSVGFLIIAID 677
Score = 27.3 bits (59), Expect = 7.7
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 35 RPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLP-KPISLPPAPPPSTRPEISSS 93
R P P S T+ P LP+P PP +P L P S PP P +S S
Sbjct: 4 RSPLPLPPSSLTTSLRP-----LPSPNPPSPPSLRPHLRLAPASPPPGSVPPPTRSLSPS 168
Query: 94 G 94
G
Sbjct: 169G 171
>TC217702 similar to GB|AAL06971.1|15810091|AY056083 AT4g30260/F9N11_110
{Arabidopsis thaliana;} , partial (39%)
Length = 436
Score = 176 bits (446), Expect = 1e-44
Identities = 99/136 (72%), Positives = 106/136 (77%), Gaps = 5/136 (3%)
Frame = +3
Query: 1 MSHGDTIPLHPSSQSDIDEIENLIYASPATVLP-ARPPSPPRASIPVTT---SSPFINSN 56
MSH DTIPLHPSSQSDIDEIENLI AS +P ARPPSPPRASIPV+ SPFI SN
Sbjct: 54 MSHSDTIPLHPSSQSDIDEIENLINASVHQSVPSARPPSPPRASIPVSVYAAPSPFIYSN 233
Query: 57 LPAPLP-PKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLS 115
LP P P PKSS+S ++PP PPP R +ISSSGFG APNTLTEPVWDT KRDLS
Sbjct: 234 LPPPPPLPKSSVS--------AVPPPPPPP-RADISSSGFGSAPNTLTEPVWDTEKRDLS 386
Query: 116 RIVSNLKLVVFPNPYR 131
RIVSNLKLVVFPNP+R
Sbjct: 387 RIVSNLKLVVFPNPFR 434
>BG238258 similar to GP|15010748|gb| AT4g30260/F9N11_110 {Arabidopsis
thaliana}, partial (21%)
Length = 382
Score = 88.6 bits (218), Expect = 3e-18
Identities = 53/89 (59%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = +1
Query: 34 ARPPSPPRASIPVTTSS---PFINSNLPAPLP-PKSSISQPQLPKPISLPPAPPPSTRPE 89
ARPP PPRA IPV S+ PFI SNLP P P PKSS+S P PP +
Sbjct: 103 ARPPRPPRACIPVCVSAAPCPFIYSNLPPPPPVPKSSVSGV---------PTDPPPPGAD 255
Query: 90 ISSSGFGPAPNTLTEPVWDTVKRDLSRIV 118
IS SGFG PNTLTEPVWD KRDLSRIV
Sbjct: 256 ISYSGFGFDPNTLTEPVWDPGKRDLSRIV 342
Score = 71.2 bits (173), Expect = 5e-13
Identities = 51/138 (36%), Positives = 62/138 (43%), Gaps = 8/138 (5%)
Frame = +2
Query: 2 SHGDTIPLHPSSQSDIDEIENLIYA--SPATVLPARPPSPPRASIPVTTSSPFINSNLPA 59
SH D IPLHPSSQSDIDEIENLI A SP + L P P + P + P S+ P
Sbjct: 2 SHSDAIPLHPSSQSDIDEIENLINARSSPISRLRRDLPDPHAPASPSASPPPLAPSSTPT 181
Query: 60 PLPPKSSISQP------QLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRD 113
L ++ P LP+ P P + P S S G + ++ W
Sbjct: 182 SLHRHPCLNPPFPASLRTLPRRAPTSPTPGSGSTPTRSLSPSGTPGSAISRESW------ 343
Query: 114 LSRIVSNLKLVVFPNPYR 131
SNLKLV P P R
Sbjct: 344 -----SNLKLVGVPQPLR 382
>BQ080437 homologue to GP|20197033|gb| expressed protein {Arabidopsis
thaliana}, partial (13%)
Length = 422
Score = 79.3 bits (194), Expect = 2e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +2
Query: 228 VVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLM 264
VVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLM
Sbjct: 2 VVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLM 112
>TC219140 similar to GB|AAO44047.1|28466877|BT004781 At2g39020 {Arabidopsis
thaliana;} , partial (75%)
Length = 730
Score = 55.1 bits (131), Expect = 3e-08
Identities = 37/111 (33%), Positives = 50/111 (44%), Gaps = 6/111 (5%)
Frame = +3
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASI----PVTTSSPFINSNLPAPLPP 63
P HPS + + +SPA+ P P P S P + +SP + P PP
Sbjct: 54 PPHPSRKPPL--------SSPASASPPLPMFPTSTSSSTRWPSSNASPTSSPPPSPPSPP 209
Query: 64 KSSISQPQLPKPISL--PPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKR 112
SS+ P P P S PP PP S +P + P+PN+LT P+ T R
Sbjct: 210 PSSLPHPSNPSPSSF*KPPPPPSSIQP*TQTLSTNPSPNSLTFPIPSTTPR 362
>TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (44%)
Length = 996
Score = 50.8 bits (120), Expect = 7e-07
Identities = 37/105 (35%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +1
Query: 6 TIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKS 65
T P P+ QS I++ P++ PA+ P P P SSP S P+ PP S
Sbjct: 190 TSPAPPTPQSSPPPIQSSPPPVPSSPPPAQSPPPASTPPPAPLSSPPPASPPPSSPPPAS 369
Query: 66 --------SISQPQLPKPISLPPA-PPPSTRPEISSSGFGPAPNT 101
+ P P P S PPA PPP+T P S F P P T
Sbjct: 370 PPPASPPPASPPPASPPPASPPPASPPPATPPPASPPPFSPPPAT 504
Score = 39.7 bits (91), Expect = 0.002
Identities = 27/80 (33%), Positives = 34/80 (41%), Gaps = 2/80 (2%)
Frame = +1
Query: 28 PATVLPARPP--SPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
PA+ PA PP SPP AS P + P P P P P P P + PPA P+
Sbjct: 376 PASPPPASPPPASPPPASPPPASPPPAT----PPPASPPPFSPPPATPPPATPPPALTPT 543
Query: 86 TRPEISSSGFGPAPNTLTEP 105
++ PAP + P
Sbjct: 544 PLSSPPATSPAPAPAKVVAP 603
Score = 34.3 bits (77), Expect = 0.063
Identities = 32/92 (34%), Positives = 38/92 (40%), Gaps = 8/92 (8%)
Frame = +1
Query: 28 PATVLPARPP--SPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLP-----P 80
PAT PA PP SPP A+ P T P + P PL S P P P P
Sbjct: 451 PATPPPASPPPFSPPPATPPPATPPPALT---PTPL------SSPPATSPAPAPAKVVAP 603
Query: 81 APPPSTRPEISSSGFGPA-PNTLTEPVWDTVK 111
A PS P S S P+ ++ E +W K
Sbjct: 604 ALSPSLAPGPSLSTISPSGDDSGAEKLWSFQK 699
Score = 32.3 bits (72), Expect = 0.24
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +1
Query: 23 LIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAP 82
LI+ A V P + P P ++ P +S P P P + S P P P +
Sbjct: 145 LIFTVVAGVGAQGPSTSPAPPTPQSSPPPIQSSPPPVPSSPPPAQSPPPASTPPPAPLSS 324
Query: 83 PPSTRPEISS 92
PP P SS
Sbjct: 325 PPPASPPPSS 354
>TC204808 weakly similar to UP|HQGT_RAUSE (Q9AR73) Hydroquinone
glucosyltransferase (Arbutin synthase) , partial (25%)
Length = 431
Score = 50.4 bits (119), Expect = 9e-07
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
A P+T P PSPP +S T+S P +++ P +PP +S + PQ P S +PP +
Sbjct: 39 AKPSTPSPPHTPSPPSSS---TSSPPTPSTSPPNSMPPPTSSTPPQPPSSPSPSTSPPST 209
Query: 86 TRPEISSS---GFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNP-YREDPG 135
+R SS P P + PV D + L R K V+ + YRE G
Sbjct: 210 SRSSASSETSRNRSPIPGCIPLPVKDFLDPVLERTNEAYKWVLHHSKRYREAEG 371
Score = 37.4 bits (85), Expect = 0.007
Identities = 30/72 (41%), Positives = 35/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPK---PISLPPAPPPSTRPE 89
P+ PS P A P T S P P PP SS S P P P S+PP P ST P+
Sbjct: 12 PSSSPSLPSAK-PSTPSPPH------TPSPPSSSTSSPPTPSTSPPNSMPP-PTSSTPPQ 167
Query: 90 ISSSGFGPAPNT 101
SS P+P+T
Sbjct: 168 PPSS---PSPST 194
Score = 28.1 bits (61), Expect = 4.5
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 45 PVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTE 104
P +SSP +LP+ P S+ S P P P S + PP+ P S P P + T
Sbjct: 6 PTPSSSP----SLPSAKP--STPSPPHTPSPPSSSTSSPPT--PSTSPPNSMPPPTSSTP 161
Query: 105 P 105
P
Sbjct: 162 P 164
>TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall protein,
partial (48%)
Length = 1076
Score = 50.4 bits (119), Expect = 9e-07
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 6 TIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKS 65
T P P+ Q+ +++ P++ P++ P P P SSP +S P+ PP S
Sbjct: 282 TSPAPPTPQASPPPVQSSPPPVPSSPPPSQSPPPASTPPPSPLSSPPPSSPPPSSPPPSS 461
Query: 66 SISQPQLPKPISLPPA-PPPSTRPEISSSGFGPAPNT 101
P P P S PPA PPPS+ P S F P P T
Sbjct: 462 P--PPASPPPSSPPPASPPPSSPPPSSPPPFSPPPAT 566
Score = 43.1 bits (100), Expect = 1e-04
Identities = 29/82 (35%), Positives = 37/82 (44%), Gaps = 4/82 (4%)
Frame = +3
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINS--NLPAPLPPKSSISQPQLPKPISLPPA-PPP 84
P + L + PPS P S P +S P + + P P P S P P P S PPA PPP
Sbjct: 396 PPSPLSSPPPSSPPPSSPPPSSPPPASPPPSSPPPASPPPSSPPPSSPPPFSPPPATPPP 575
Query: 85 ST-RPEISSSGFGPAPNTLTEP 105
+T P + P L+ P
Sbjct: 576 ATPPPAVPPPSLTPTVTPLSSP 641
Score = 41.2 bits (95), Expect = 5e-04
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 28 PATVLPARPP--SPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
P++ PA PP SPP AS P ++ P + P P P + P P P PP+ P+
Sbjct: 453 PSSPPPASPPPSSPPPASPPPSSPPP----SSPPPFSPPPATPPPATPPPAVPPPSLTPT 620
Query: 86 TRPEISSSGFGPAPN 100
P S PAP+
Sbjct: 621 VTPLSSPPVSSPAPS 665
Score = 40.4 bits (93), Expect = 9e-04
Identities = 29/85 (34%), Positives = 40/85 (46%), Gaps = 7/85 (8%)
Frame = +3
Query: 28 PATVLPARPP--SPPRASIPVTTSSPFINSNLPAPLPPKSS----ISQPQLPKPISLPPA 81
P++ P+ PP SPP AS P ++ P ++ P PP SS P P P + PPA
Sbjct: 423 PSSPPPSSPPPSSPPPASPPPSSPPP---ASPPPSSPPPSSPPPFSPPPATPPPATPPPA 593
Query: 82 -PPPSTRPEISSSGFGPAPNTLTEP 105
PPPS P ++ P + P
Sbjct: 594 VPPPSLTPTVTPLSSPPVSSPAPSP 668
Score = 37.4 bits (85), Expect = 0.007
Identities = 30/91 (32%), Positives = 41/91 (44%), Gaps = 8/91 (8%)
Frame = +3
Query: 28 PATVLPARPP--SPPRASIPVTTSSPFINSNL-PAPLPPKSSISQPQLP---KPISLPPA 81
PA+ P+ PP SPP +S P ++ PF P P P ++ P L P+S PP
Sbjct: 468 PASPPPSSPPPASPPPSSPPPSSPPPFSPPPATPPPATPPPAVPPPSLTPTVTPLSSPPV 647
Query: 82 PPPSTRPEISSSGFGPA--PNTLTEPVWDTV 110
P+ P S F PA P+ P T+
Sbjct: 648 SSPAPSP---SKVFAPALSPSLAPGPSLSTI 731
Score = 33.1 bits (74), Expect = 0.14
Identities = 30/71 (42%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 28 PATVLPARPPS--PPRASIPVTT--SSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPP 83
PAT PA PP PP + P T SSP ++S P+P S + P L SL P P
Sbjct: 558 PATPPPATPPPAVPPPSLTPTVTPLSSPPVSSPAPSP----SKVFAPALSP--SLAPGPS 719
Query: 84 PSTRPEISSSG 94
ST IS SG
Sbjct: 720 LST---ISPSG 743
Score = 32.0 bits (71), Expect = 0.31
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 55 SNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEP 105
S PAP P++S P P +P +PPPS P +S+ P P+ L+ P
Sbjct: 279 STSPAPPTPQAS-PPPVQSSPPPVPSSPPPSQSPPPAST---PPPSPLSSP 419
Score = 28.5 bits (62), Expect = 3.5
Identities = 26/80 (32%), Positives = 33/80 (40%)
Frame = +3
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
ASP P PPS P PF P P P + P +P P SL P P
Sbjct: 501 ASPPPSSP--PPSSPP---------PF----SPPPATPPPATPPPAVPPP-SLTPTVTPL 632
Query: 86 TRPEISSSGFGPAPNTLTEP 105
+ P +SS P+P+ + P
Sbjct: 633 SSPPVSSP--APSPSKVFAP 686
>TC208362 weakly similar to UP|O64835 (O64835) Expressed protein
(At2g23670/F26B6.32), partial (72%)
Length = 805
Score = 48.1 bits (113), Expect = 4e-06
Identities = 32/92 (34%), Positives = 40/92 (42%), Gaps = 3/92 (3%)
Frame = -2
Query: 11 PSSQSDIDEIENLIYASPATVLPA--RPP-SPPRASIPVTTSSPFINSNLPAPLPPKSSI 67
P+ Q I E++ Y SP + P +PP PP P +SP S P PL P
Sbjct: 525 PTHQVTIFELQAPKYRSPPPLQPKSQKPPLPPPLPPAPTPQNSPPPQSPSPLPLSPSPPP 346
Query: 68 SQPQLPKPISLPPAPPPSTRPEISSSGFGPAP 99
P P P PP P P +P+I S P P
Sbjct: 345 PTPSPPSPAPSPPPPIPYPQPQIPLSQSPPLP 250
Score = 28.5 bits (62), Expect = 3.5
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = -2
Query: 25 YASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPP 84
Y P L PP PP P + S+ PAP P S S P P + + P
Sbjct: 294 YPQPQIPLSQSPPLPPP---PSSDSAVSRTRECPAPRTPLPSPSTPSSPSEKTATASAPR 124
Query: 85 STRP 88
S P
Sbjct: 123 SEVP 112
>TC208361 weakly similar to UP|O64835 (O64835) Expressed protein
(At2g23670/F26B6.32), partial (72%)
Length = 636
Score = 47.8 bits (112), Expect = 6e-06
Identities = 37/104 (35%), Positives = 51/104 (48%), Gaps = 14/104 (13%)
Frame = -2
Query: 12 SSQSDIDEIENLIYASPATVLPA--RPPSPPR---ASIPVTTSSPFINSNLP-APLPPKS 65
+S+ I E+++ Y SP + P +PP PP A P + SP S LP +P PP
Sbjct: 512 NSRVTIFELQDPKYRSPLPLQPKSQKPPLPPPLPPAPTPQNSPSPLSPSPLPLSPSPPPP 333
Query: 66 SIS--------QPQLPKPISLPPAPPPSTRPEISSSGFGPAPNT 101
+ S QPQ+P S P PPPS+ +S + PAP T
Sbjct: 332 TPSPPPPIPYPQPQIPLSQSPPLPPPPSSDSSVSRTRECPAPRT 201
Score = 30.8 bits (68), Expect = 0.70
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 58 PAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLT 103
P PL PKS +P LP P+ PP+ P+ S S P+P L+
Sbjct: 464 PLPLQPKSQ--KPPLPPPL------PPAPTPQNSPSPLSPSPLPLS 351
Score = 29.6 bits (65), Expect = 1.6
Identities = 21/64 (32%), Positives = 24/64 (36%)
Frame = -2
Query: 25 YASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPP 84
Y P L PP PP P + SS PAP P S S P P + + P
Sbjct: 305 YPQPQIPLSQSPPLPPP---PSSDSSVSRTRECPAPRTPLPSPSTPSSPSEKTATASAPR 135
Query: 85 STRP 88
S P
Sbjct: 134 SEVP 123
>TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (47%)
Length = 870
Score = 47.8 bits (112), Expect = 6e-06
Identities = 29/83 (34%), Positives = 42/83 (49%), Gaps = 3/83 (3%)
Frame = +3
Query: 26 ASPATVLPARPPSP-PRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPA--P 82
A+PA PA+ PS P++ PV + + PA P S + P P P++ PPA P
Sbjct: 168 ATPAAATPAQAPSTVPKSPAPVASPKSSPPAATPASTPAASPTTTPAAPAPVTKPPAASP 347
Query: 83 PPSTRPEISSSGFGPAPNTLTEP 105
PP+T P + PAP ++ P
Sbjct: 348 PPATPPPATPP---PAPVPVSSP 407
Score = 43.1 bits (100), Expect = 1e-04
Identities = 28/65 (43%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 26 ASPATV--LPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPP 83
ASP T PA PP AS P T P PAP+P +S P P P+S PPAP
Sbjct: 285 ASPTTTPAAPAPVTKPPAASPPPATPPPATPP--PAPVP----VSSPPAPVPVSSPPAPV 446
Query: 84 PSTRP 88
P P
Sbjct: 447 PVAAP 461
Score = 41.6 bits (96), Expect = 4e-04
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +3
Query: 26 ASPATVLPARPPSPPRASIPVTTS--SPFINSNLPAPLPPKSSISQPQLPKPISLPPAP- 82
A+PA V SPP A+ P T +P S+ PAP+P +S P P P++ P P
Sbjct: 306 AAPAPVTKPPAASPPPATPPPATPPPAPVPVSSPPAPVP----VSSPPAPVPVAAPTTPV 473
Query: 83 PPSTRPEISSSG---FGPAPNTLTEP 105
PS P+ G PAP+ L P
Sbjct: 474 APSPAPKHKKKGKKHGAPAPSPLLGP 551
Score = 38.5 bits (88), Expect = 0.003
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 21/96 (21%)
Frame = +3
Query: 26 ASPATVLPARPPSPPRASIPVTTS-SPFINSNLPAPLP---PKSSISQPQLPK------- 74
ASP P P +PP A +PV++ +P S+ PAP+P P + ++ PK
Sbjct: 339 ASPPPATPP-PATPPPAPVPVSSPPAPVPVSSPPAPVPVAAPTTPVAPSPAPKHKKKGKK 515
Query: 75 -------PISLPPAPP---PSTRPEISSSGFGPAPN 100
P+ PPAPP P + SS G G A N
Sbjct: 516 HGAPAPSPLLGPPAPPTGAPGPSEDASSPGPGTAAN 623
Score = 37.4 bits (85), Expect = 0.007
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 27 SPATVLPAR--PPSPPRASIPVTTSSPFINSNLPAPL-PPKSSISQPQLPKPISLPPAPP 83
SPA V + PP+ AS P +SP PAP+ P ++ P P P + PPAP
Sbjct: 219 SPAPVASPKSSPPAATPASTP--AASPTTTPAAPAPVTKPPAASPPPATPPPATPPPAPV 392
Query: 84 PSTRPEISSSGFGPAPNTLTEP 105
P + P PAP ++ P
Sbjct: 393 PVSSP--------PAPVPVSSP 434
Score = 37.0 bits (84), Expect = 0.010
Identities = 27/81 (33%), Positives = 39/81 (47%), Gaps = 1/81 (1%)
Frame = +3
Query: 26 ASPATVLPARPPSPPRASIPVTT-SSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPP 84
ASP + PA P+ A+ P TT ++P + PA PP ++ P P P +P + PP
Sbjct: 234 ASPKSSPPAATPASTPAASPTTTPAAPAPVTKPPAASPPPAT-PPPATPPPAPVPVSSPP 410
Query: 85 STRPEISSSGFGPAPNTLTEP 105
+ P S PAP + P
Sbjct: 411 APVPVSSP----PAPVPVAAP 461
>TC216000 similar to UP|O22253 (O22253) Photolyase/blue-light receptor
(Photolyase/blue light photoreceptor PHR2), partial
(84%)
Length = 1641
Score = 47.8 bits (112), Expect = 6e-06
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = +3
Query: 11 PSSQSDIDEIENLIYASPATVL-----PARPPSPPRASIPVTTSSPFINSNLPAPLPPKS 65
PSS+S + + SP +L P+ PPSPP S P++ S P + LP P P +
Sbjct: 81 PSSKSQPKPHPSHTFLSPPPLLLLPKPPSNPPSPPTPSTPLSPSLPTAPATLPTPPPSAA 260
Query: 66 SISQPQLPKPIS--LPPAPPPSTRPEISSSGFGPAPNT 101
S S + +PPP+T P SS P T
Sbjct: 261 PPSSGSATTSASSTMSASPPPTTTPSPSSPSTASTPPT 374
Score = 38.5 bits (88), Expect = 0.003
Identities = 25/61 (40%), Positives = 28/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 11 PSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAP-LPPKSSISQ 69
PSS S + + ASP P SP AS P TT+S S PAP PP SS
Sbjct: 264 PSSGSATTSASSTMSASPPPTTTPSPSSPSTASTPPTTASRHPASTRPAPTAPPSSSTPS 443
Query: 70 P 70
P
Sbjct: 444 P 446
Score = 35.8 bits (81), Expect = 0.022
Identities = 22/65 (33%), Positives = 31/65 (46%)
Frame = +3
Query: 39 PPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPA 98
PP +P S+P P+P P + +S P LP + P PPPS P S S A
Sbjct: 135 PPLLLLPKPPSNP------PSPPTPSTPLS-PSLPTAPATLPTPPPSAAPPSSGSATTSA 293
Query: 99 PNTLT 103
+T++
Sbjct: 294 SSTMS 308
>TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell wall
protein gp1 precursor (Hydroxyproline-rich glycoprotein
1), partial (13%)
Length = 1409
Score = 47.4 bits (111), Expect = 7e-06
Identities = 32/75 (42%), Positives = 39/75 (51%), Gaps = 2/75 (2%)
Frame = +3
Query: 27 SPATVLP--ARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPP 84
SP + +P A PPSP S P ++SP P+P PP SS S P P P S P+ PP
Sbjct: 240 SPPSTMPPSATPPSPSATSSP--SASPTAPPTSPSPSPP-SSPSPPSAPSPSSTAPS-PP 407
Query: 85 STRPEISSSGFGPAP 99
S P S S P+P
Sbjct: 408 SASPPTSPSPSPPSP 452
Score = 37.7 bits (86), Expect = 0.006
Identities = 30/104 (28%), Positives = 38/104 (35%), Gaps = 14/104 (13%)
Frame = +3
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSP--------PRASIPVTTSSPFINSNLPA 59
P PS+ S + ASP T PPSP P + P + +SP S
Sbjct: 357 PSPPSAPSPSSTAPSPPSASPPTSPSPSPPSPASTASANSPASGSPTSRTSPTSPSPTST 536
Query: 60 PLPPKSSISQP------QLPKPISLPPAPPPSTRPEISSSGFGP 97
PP S S P P P + P P P+T S + P
Sbjct: 537 SKPPAPSSSSPA*PSSKPSPSPTPISPDPSPATSTPTSHTSISP 668
Score = 37.4 bits (85), Expect = 0.007
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPA-PPP 84
ASP + PSPP + P + SP + P P +S S P P P S A P
Sbjct: 306 ASPTAPPTSPSPSPPSSPSPPSAPSPSSTAPSPPSASPPTSPS-PSPPSPASTASANSPA 482
Query: 85 STRPEISSSGFGPAPNTLTEP 105
S P +S P+P + ++P
Sbjct: 483 SGSPTSRTSPTSPSPTSTSKP 545
Score = 34.7 bits (78), Expect = 0.048
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 28/106 (26%)
Frame = +3
Query: 26 ASPATVLPARP--PSPPRASIPVTTS-SPFINS--NLPAPLPPK---------------S 65
A P + P+ P PSPP A P +T+ SP S P+P PP +
Sbjct: 318 APPTSPSPSPPSSPSPPSAPSPSSTAPSPPSASPPTSPSPSPPSPASTASANSPASGSPT 497
Query: 66 SISQPQLPKPISL--PPAPP------PSTRPEISSSGFGPAPNTLT 103
S + P P P S PPAP PS++P S + P P+ T
Sbjct: 498 SRTSPTSPSPTSTSKPPAPSSSSPA*PSSKPSPSPTPISPDPSPAT 635
Score = 34.3 bits (77), Expect = 0.063
Identities = 25/80 (31%), Positives = 40/80 (49%), Gaps = 1/80 (1%)
Frame = +3
Query: 27 SPATVLPARPPSP-PRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
+P+T P R P+P P +++P + + P S P S + P P P S P +P P
Sbjct: 201 NPSTSPPHRTPAPSPPSTMPPSATPP---SPSATSSPSASPTAPPTSPSP-SPPSSPSPP 368
Query: 86 TRPEISSSGFGPAPNTLTEP 105
+ P SS+ P+P + + P
Sbjct: 369 SAPSPSST--APSPPSASPP 422
>TC228724 similar to UP|Q9FML2 (Q9FML2) Histone deacetylase, partial (82%)
Length = 1677
Score = 47.4 bits (111), Expect = 7e-06
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +2
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPP- 84
++P T + PPSPPR S P+ S +++ A P S+ S P P + P APP
Sbjct: 296 STPTTTSTSSPPSPPRPS-PIPPSLVTSSASTSARTAPSSTASSPSARPPPAAPSAPPSN 472
Query: 85 STRPEISSSGFGPAPNTL---TEPVWDTVKRDLSRIVSN 120
ST P +S GPA + + P+ LS SN
Sbjct: 473 STAPTPTSPSIGPAASIMPRSLRPLDSATSTTLSSASSN 589
>TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
(AtAGP4) (AT5g10430/F12B17_220), partial (50%)
Length = 966
Score = 47.0 bits (110), Expect = 9e-06
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Frame = +2
Query: 27 SPATVLPARPPS---PPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPP 83
+PA PA PP PP A+ P + P + PAP PP ++ P P S P A P
Sbjct: 263 APAPTTPATPPPATPPPAATPPPAATPPPAATPTPAPAPPTAA------PTPASSPAASP 424
Query: 84 PSTRPEISSS--------GFGPAPNTLTEP 105
PS P ++ S G P P+ EP
Sbjct: 425 PSPSPTVTPSPTSPNTPPGPSPGPSGSAEP 514
Score = 41.6 bits (96), Expect = 4e-04
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 20 IENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLP 79
I L+ +S P PS P P TT SP + PAP P + P P P + P
Sbjct: 158 ILGLLASSCLAQAPGAAPSQP----PTTTPSPPPPRSAPAPAPTTPATPPPATPPPAATP 325
Query: 80 P---APPPSTRPEISSSGFGPAPNTLTEP 105
P PPP+ P + + AP + P
Sbjct: 326 PPAATPPPAATPTPAPAPPTAAPTPASSP 412
Score = 37.0 bits (84), Expect = 0.010
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 26 ASPATVLPARPPSPPR---ASIPVTTSSPFINSNLPAPLPPKSSISQPQL-PKPISLPPA 81
+ P T P+ P PPR A P T ++P + PA PP ++ P P P PP
Sbjct: 212 SQPPTTTPS--PPPPRSAPAPAPTTPATPPPATPPPAATPPPAATPPPAATPTPAPAPPT 385
Query: 82 PPPSTRPEISSSGFGPAPNTLTEP 105
P+ ++S P+P P
Sbjct: 386 AAPTPASSPAASPPSPSPTVTPSP 457
Score = 32.3 bits (72), Expect = 0.24
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAP--LPPKSSISQPQLPKPISLPPAPPPS 85
P P P+PP A+ P SSP + P+P P +S + P P P A PP
Sbjct: 344 PPAATPTPAPAPPTAA-PTPASSPAASPPSPSPTVTPSPTSPNTPPGPSPGPSGSAEPPP 520
Query: 86 TRPEISSS 93
S+S
Sbjct: 521 PSAAFSAS 544
>TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {Arabidopsis
thaliana;} , partial (68%)
Length = 1307
Score = 46.6 bits (109), Expect = 1e-05
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINS-NLPAPLPPKSSISQPQLPKPISLPPAPPP 84
+S ++ LP P +PP+ S P TTS+ S L P P + P P PP+PPP
Sbjct: 491 SSFSSPLPFNPSTPPKPSAPPTTSTASSASLRLAFPSAPPLVSAMPPTPTNAPPPPSPPP 670
Query: 85 STRPEISSSGFGPAPNT 101
S P S+S P+P+T
Sbjct: 671 SATPPSSTS---PSPST 712
Score = 42.0 bits (97), Expect = 3e-04
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = +2
Query: 2 SHGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASI--PVTTSSPFINSNLPA 59
S +P +PS+ AS A++ A P +PP S P T++P S P+
Sbjct: 494 SFSSPLPFNPSTPPKPSAPPTTSTASSASLRLAFPSAPPLVSAMPPTPTNAPPPPSPPPS 673
Query: 60 PLPPKSSISQPQL------PKPISLPPAPPPSTRPEISSSGFGPAPNT 101
PP S+ P P P S P + PS R SS+ P P +
Sbjct: 674 ATPPSSTSPSPSTSSTSAAPSPPSTPSSNTPSARRTSSSTSSSPKPTS 817
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/77 (38%), Positives = 37/77 (47%), Gaps = 14/77 (18%)
Frame = +2
Query: 23 LIYASPATVLPARPPS--PPRASIPVTTS-SPFINSNLPAPLPP-----------KSSIS 68
L+ A P T A PP PP A+ P +TS SP +S AP PP ++S S
Sbjct: 611 LVSAMPPTPTNAPPPPSPPPSATPPSSTSPSPSTSSTSAAPSPPSTPSSNTPSARRTSSS 790
Query: 69 QPQLPKPISLPPAPPPS 85
PKP S P + PPS
Sbjct: 791 TSSSPKPTSNPSSNPPS 841
>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (11%)
Length = 678
Score = 46.2 bits (108), Expect = 2e-05
Identities = 33/84 (39%), Positives = 37/84 (43%), Gaps = 5/84 (5%)
Frame = +3
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSI----SQPQLPKPISLPP-A 81
SP LP PP P IP++T P S P PLPP S S P L P LPP A
Sbjct: 243 SPPPPLPPSPPPPLPPPIPLSTPPPLPPSP-PPPLPPSPSPPNLPSPPPLAPPPPLPPLA 419
Query: 82 PPPSTRPEISSSGFGPAPNTLTEP 105
PPP P + GP + P
Sbjct: 420 PPPPPLPPLPIPPNGPGEYLVPPP 491
Score = 42.0 bits (97), Expect = 3e-04
Identities = 26/73 (35%), Positives = 30/73 (40%)
Frame = +3
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPST 86
SP LP PP PP P P I + P PLPP P P P +LP PP +
Sbjct: 219 SPPPPLPPSPP-PPLPPSPPPPLPPPIPLSTPPPLPPSPPPPLPPSPSPPNLPSPPPLAP 395
Query: 87 RPEISSSGFGPAP 99
P + P P
Sbjct: 396 PPPLPPLAPPPPP 434
Score = 41.2 bits (95), Expect = 5e-04
Identities = 28/78 (35%), Positives = 34/78 (42%)
Frame = +3
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTR 87
P P PPSPP P + P + + P PLPP +S P LPP+PPP
Sbjct: 189 PLAPPPPLPPSPPPPLPP--SPPPPLPPSPPPPLPPPIPLSTPP-----PLPPSPPPPLP 347
Query: 88 PEISSSGFGPAPNTLTEP 105
P S P+P L P
Sbjct: 348 PSPSPPNL-PSPPPLAPP 398
Score = 40.8 bits (94), Expect = 7e-04
Identities = 27/71 (38%), Positives = 31/71 (43%)
Frame = +3
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGF 95
PP PP+ P P I P PLPP P P P LPP+PPP P I S
Sbjct: 150 PPPPPKECPP-----PPIPLAPPPPLPPSPPPPLPPSPPP-PLPPSPPPPLPPPIPLSTP 311
Query: 96 GPAPNTLTEPV 106
P P + P+
Sbjct: 312 PPLPPSPPPPL 344
Score = 37.0 bits (84), Expect = 0.010
Identities = 28/76 (36%), Positives = 31/76 (39%), Gaps = 3/76 (3%)
Frame = +3
Query: 33 PARPPSPPRASIPVTTSSPFINSNL-PAPLPPKSSISQPQLPKPI--SLPPAPPPSTRPE 89
P P PP P P L P+P PP P LP PI S PP PPS P
Sbjct: 162 PKECPPPPIPLAPPPPLPPSPPPPLPPSPPPPLPPSPPPPLPPPIPLSTPPPLPPSPPPP 341
Query: 90 ISSSGFGPAPNTLTEP 105
+ S P+P L P
Sbjct: 342 LPPS---PSPPNLPSP 380
Score = 29.6 bits (65), Expect = 1.6
Identities = 16/46 (34%), Positives = 21/46 (44%)
Frame = +3
Query: 61 LPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEPV 106
LPP P P P++ PP PPS P + S P P + P+
Sbjct: 147 LPPPPPKECPPPPIPLAPPPPLPPSPPPPLPPSPPPPLPPSPPPPL 284
>TC228693 similar to UP|Q8S9A6 (Q8S9A6) Glucosyltransferase-3, partial (59%)
Length = 907
Score = 45.8 bits (107), Expect = 2e-05
Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPK-PISLP-PAPPPS 85
P T P PP P A+ P TS P P P PP S + P+ P P SLP P+P S
Sbjct: 196 PPTKTPPPPPPPSPATPPPNTSPPS-----PPPPPPSPSTASPRSPSPPFSLPWPSPSSS 360
Query: 86 TRP----EISSSGFGPAPNTLTEPVW 107
P ++SS P P T + W
Sbjct: 361 AAPPATTSVASSTPSPKPQTSKQ*SW 438
Score = 32.7 bits (73), Expect = 0.18
Identities = 17/51 (33%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
Frame = +1
Query: 50 SPFIN-SNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAP 99
SPF + + P PP P P P + PP+PPP ++S P+P
Sbjct: 172 SPFFS*PHPPTKTPPPPPPPSPATPPPNTSPPSPPPPPPSPSTASPRSPSP 324
>TC208857 weakly similar to UP|Q84KG8 (Q84KG8) Fatty acid delta-6 desaturase,
partial (21%)
Length = 648
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/97 (35%), Positives = 41/97 (42%)
Frame = +2
Query: 7 IPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSS 66
+ LHP ++ L+ A P P P P R P T SSP S LP P P S
Sbjct: 107 LDLHPRQ-----DLRRLLLAPPPPRRPPPTPHPRRERTPPTPSSP---STLPTPPPSSSP 262
Query: 67 ISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLT 103
S P P + P PPP+T SSS P + T
Sbjct: 263 PSPPPTVFPTTPSPPPPPTT---ASSSPTSPRSTSST 364
Score = 30.8 bits (68), Expect = 0.70
Identities = 23/72 (31%), Positives = 35/72 (47%)
Frame = +2
Query: 26 ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS 85
+SP+T+ P PP +S P + F + P P PP ++ S P P+ S + +
Sbjct: 218 SSPSTL----PTPPPSSSPPSPPPTVFPTTPSPPP-PPTTASSSPTSPRSTS---STARA 373
Query: 86 TRPEISSSGFGP 97
T+P SS F P
Sbjct: 374 TQPPSSSPLFSP 409
Score = 27.7 bits (60), Expect = 5.9
Identities = 22/67 (32%), Positives = 26/67 (37%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 SHGDTIPLHPSSQSDIDEIENLIYASPATVLPARP--PSPPRASIPVTTSSPFINSNLPA 59
S T+P P S S + P TV P P P PP + TS +S A
Sbjct: 218 SSPSTLPTPPPSSSPP--------SPPPTVFPTTPSPPPPPTTASSSPTSPRSTSSTARA 373
Query: 60 PLPPKSS 66
PP SS
Sbjct: 374 TQPPSSS 394
>TC225560 similar to UP|Q9FUL8 (Q9FUL8) Arabinogalactan protein, partial
(48%)
Length = 1030
Score = 45.8 bits (107), Expect = 2e-05
Identities = 31/94 (32%), Positives = 44/94 (45%), Gaps = 2/94 (2%)
Frame = +2
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKS-- 65
P P+S + + ++ AS A P S P AS T ++P + PA PP +
Sbjct: 200 PSTPNSPAPVASPKSSPPASSPKPATATPASSPAASPTTTPAAPAPATKPPAASPPPAPV 379
Query: 66 SISQPQLPKPISLPPAPPPSTRPEISSSGFGPAP 99
+S P P P+S PPAP P P ++ PAP
Sbjct: 380 PVSSPPAPVPVSSPPAPVPVAAP---TTPVAPAP 472
Score = 44.7 bits (104), Expect = 5e-05
Identities = 34/102 (33%), Positives = 42/102 (40%), Gaps = 22/102 (21%)
Frame = +2
Query: 26 ASPATVLPARPPSPPRASIPVTT--SSPFINSNLPAPLPPKSS----------------- 66
A+PA PA+ PS P + PV + SSP +S PA P SS
Sbjct: 167 ATPAAATPAQAPSTPNSPAPVASPKSSPPASSPKPATATPASSPAASPTTTPAAPAPATK 346
Query: 67 ---ISQPQLPKPISLPPAPPPSTRPEISSSGFGPAPNTLTEP 105
S P P P+S PPAP P + P PAP + P
Sbjct: 347 PPAASPPPAPVPVSSPPAPVPVSSP--------PAPVPVAAP 448
Score = 35.4 bits (80), Expect = 0.028
Identities = 30/97 (30%), Positives = 39/97 (39%), Gaps = 22/97 (22%)
Frame = +2
Query: 27 SPATVLPARPP---SPPRASIPVTTS-SPFINSNLPAPLP------PKSSISQPQ----- 71
+PA PA P SPP A +PV++ +P S+ PAP+P P + P
Sbjct: 317 TPAAPAPATKPPAASPPPAPVPVSSPPAPVPVSSPPAPVPVAAPTTPVAPAPAPSKHKKK 496
Query: 72 -------LPKPISLPPAPPPSTRPEISSSGFGPAPNT 101
P P L P PP+ P S P P T
Sbjct: 497 GKKHGAPAPSPSLLGPPAPPTGAPGPSEDASSPGPAT 607
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,389,050
Number of Sequences: 63676
Number of extensions: 389622
Number of successful extensions: 13836
Number of sequences better than 10.0: 1466
Number of HSP's better than 10.0 without gapping: 6265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9734
length of query: 276
length of database: 12,639,632
effective HSP length: 96
effective length of query: 180
effective length of database: 6,526,736
effective search space: 1174812480
effective search space used: 1174812480
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0061.10